BLASTX nr result
ID: Cocculus23_contig00008683
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00008683
(206 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007036428.1| MUTS isoform 2 [Theobroma cacao] gi|50877367... 96 4e-18
ref|XP_002317931.1| muts homolog 2 family protein [Populus trich... 96 7e-18
ref|XP_006440914.1| hypothetical protein CICLE_v10018746mg [Citr... 93 4e-17
ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 ... 93 4e-17
ref|XP_006485749.1| PREDICTED: DNA mismatch repair protein MSH2-... 92 1e-16
emb|CBI15412.3| unnamed protein product [Vitis vinifera] 87 2e-15
ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [... 87 2e-15
ref|XP_006843758.1| hypothetical protein AMTR_s00007p00236950 [A... 87 3e-15
ref|XP_007036427.1| MUTS isoform 1 [Theobroma cacao] gi|50877367... 86 7e-15
ref|XP_007209075.1| hypothetical protein PRUPE_ppa000981mg [Prun... 82 6e-14
gb|EXC28067.1| DNA mismatch repair protein Msh2 [Morus notabilis] 82 8e-14
ref|XP_002463122.1| hypothetical protein SORBIDRAFT_02g038230 [S... 78 1e-12
ref|XP_004299238.1| PREDICTED: DNA mismatch repair protein MSH2-... 77 2e-12
ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein MSH2-... 76 6e-12
ref|XP_004508573.1| PREDICTED: DNA mismatch repair protein MSH2-... 75 7e-12
ref|NP_001146301.1| DNA mismatch repair protein MSH2 [Zea mays] ... 74 2e-11
gb|ACL53653.1| unknown [Zea mays] 74 2e-11
ref|XP_002885262.1| hypothetical protein ARALYDRAFT_479358 [Arab... 73 4e-11
gb|AAD04176.1| mismatch repair protein [Arabidopsis thaliana] 72 1e-10
ref|NP_566804.3| DNA mismatch repair protein Msh2 [Arabidopsis t... 72 1e-10
>ref|XP_007036428.1| MUTS isoform 2 [Theobroma cacao] gi|508773673|gb|EOY20929.1| MUTS
isoform 2 [Theobroma cacao]
Length = 942
Score = 96.3 bits (238), Expect = 4e-18
Identities = 46/68 (67%), Positives = 57/68 (83%)
Frame = -2
Query: 205 DFSPISIITDDAKEEVGSKRKRVCGPDDMSQGVARAHQFLKDFAALPLEEMGLQQSLEQV 26
DFSP SII++DA++E GSKRKR C P DMS+G A+AH+FLKDFA LPLE M L+Q+L+QV
Sbjct: 862 DFSPTSIISNDARQEEGSKRKRECDPIDMSRGAAKAHKFLKDFADLPLESMDLKQALQQV 921
Query: 25 RKLRNELE 2
KLR +LE
Sbjct: 922 NKLRGDLE 929
>ref|XP_002317931.1| muts homolog 2 family protein [Populus trichocarpa]
gi|222858604|gb|EEE96151.1| muts homolog 2 family protein
[Populus trichocarpa]
Length = 944
Score = 95.5 bits (236), Expect = 7e-18
Identities = 45/68 (66%), Positives = 58/68 (85%)
Frame = -2
Query: 205 DFSPISIITDDAKEEVGSKRKRVCGPDDMSQGVARAHQFLKDFAALPLEEMGLQQSLEQV 26
DFSP +II+DDA+EEVGSKRKR C DDMS+G ARAH+FLKDF+ LPL+ M L+Q+L Q+
Sbjct: 864 DFSPTAIISDDAREEVGSKRKRECNMDDMSKGAARAHRFLKDFSDLPLDTMDLKQALLQI 923
Query: 25 RKLRNELE 2
KL+++LE
Sbjct: 924 GKLKDDLE 931
>ref|XP_006440914.1| hypothetical protein CICLE_v10018746mg [Citrus clementina]
gi|557543176|gb|ESR54154.1| hypothetical protein
CICLE_v10018746mg [Citrus clementina]
Length = 938
Score = 92.8 bits (229), Expect = 4e-17
Identities = 41/68 (60%), Positives = 60/68 (88%)
Frame = -2
Query: 205 DFSPISIITDDAKEEVGSKRKRVCGPDDMSQGVARAHQFLKDFAALPLEEMGLQQSLEQV 26
DF+P ++I+DDAK EVGSKRKR+ P+DMS+G ARAHQFLK+F+ +PLE M L+++LE+V
Sbjct: 858 DFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERV 917
Query: 25 RKLRNELE 2
+K++++LE
Sbjct: 918 KKMKDDLE 925
>ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 [Vitis vinifera]
Length = 902
Score = 92.8 bits (229), Expect = 4e-17
Identities = 42/68 (61%), Positives = 58/68 (85%)
Frame = -2
Query: 205 DFSPISIITDDAKEEVGSKRKRVCGPDDMSQGVARAHQFLKDFAALPLEEMGLQQSLEQV 26
DFSP I+++DA ++VGSKRKR PDD+S+G ARAHQFLK+F+ LPLE+M L+++L+QV
Sbjct: 822 DFSPTEIVSNDASDKVGSKRKRESSPDDISRGAARAHQFLKEFSDLPLEKMDLKEALQQV 881
Query: 25 RKLRNELE 2
KL+N+LE
Sbjct: 882 SKLKNDLE 889
>ref|XP_006485749.1| PREDICTED: DNA mismatch repair protein MSH2-like [Citrus sinensis]
Length = 938
Score = 91.7 bits (226), Expect = 1e-16
Identities = 40/68 (58%), Positives = 60/68 (88%)
Frame = -2
Query: 205 DFSPISIITDDAKEEVGSKRKRVCGPDDMSQGVARAHQFLKDFAALPLEEMGLQQSLEQV 26
DF+P ++I+DDAK EVGSKRKR+ P+DMS+G ARAHQFLK+F+ +PLE M L+++LE+V
Sbjct: 858 DFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERV 917
Query: 25 RKLRNELE 2
++++++LE
Sbjct: 918 KRMKDDLE 925
>emb|CBI15412.3| unnamed protein product [Vitis vinifera]
Length = 945
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/71 (59%), Positives = 58/71 (81%), Gaps = 3/71 (4%)
Frame = -2
Query: 205 DFSPISIITDDAKEE---VGSKRKRVCGPDDMSQGVARAHQFLKDFAALPLEEMGLQQSL 35
DFSP I+++DA ++ VGSKRKR PDD+S+G ARAHQFLK+F+ LPLE+M L+++L
Sbjct: 862 DFSPTEIVSNDASDKGLKVGSKRKRESSPDDISRGAARAHQFLKEFSDLPLEKMDLKEAL 921
Query: 34 EQVRKLRNELE 2
+QV KL+N+LE
Sbjct: 922 QQVSKLKNDLE 932
>ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
gi|223549157|gb|EEF50646.1| DNA mismatch repair protein
MSH2, putative [Ricinus communis]
Length = 936
Score = 87.0 bits (214), Expect = 2e-15
Identities = 40/68 (58%), Positives = 55/68 (80%)
Frame = -2
Query: 205 DFSPISIITDDAKEEVGSKRKRVCGPDDMSQGVARAHQFLKDFAALPLEEMGLQQSLEQV 26
DFSP +I+++D E+VGSKR R C PDD+S+G ARAH+FLK+F+ LPLE M L+++L+QV
Sbjct: 856 DFSPNAIVSNDTTEKVGSKRNRKCDPDDVSRGAARAHKFLKEFSDLPLETMDLKEALQQV 915
Query: 25 RKLRNELE 2
KL+ LE
Sbjct: 916 SKLKEGLE 923
>ref|XP_006843758.1| hypothetical protein AMTR_s00007p00236950 [Amborella trichopoda]
gi|548846126|gb|ERN05433.1| hypothetical protein
AMTR_s00007p00236950 [Amborella trichopoda]
Length = 941
Score = 86.7 bits (213), Expect = 3e-15
Identities = 40/68 (58%), Positives = 52/68 (76%)
Frame = -2
Query: 205 DFSPISIITDDAKEEVGSKRKRVCGPDDMSQGVARAHQFLKDFAALPLEEMGLQQSLEQV 26
DFSP + ++D KEEVG+KRK C PDD+++G ARAHQFL+DF+ LPLE M Q+L++V
Sbjct: 861 DFSPTTASSNDTKEEVGAKRKHPCSPDDVTRGAARAHQFLRDFSQLPLEGMNYSQALQEV 920
Query: 25 RKLRNELE 2
KLR LE
Sbjct: 921 AKLRCSLE 928
>ref|XP_007036427.1| MUTS isoform 1 [Theobroma cacao] gi|508773672|gb|EOY20928.1| MUTS
isoform 1 [Theobroma cacao]
Length = 967
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/60 (66%), Positives = 51/60 (85%)
Frame = -2
Query: 205 DFSPISIITDDAKEEVGSKRKRVCGPDDMSQGVARAHQFLKDFAALPLEEMGLQQSLEQV 26
DFSP SII++DA++E GSKRKR C P DMS+G A+AH+FLKDFA LPLE M L+Q+L+Q+
Sbjct: 862 DFSPTSIISNDARQEEGSKRKRECDPIDMSRGAAKAHKFLKDFADLPLESMDLKQALQQL 921
>ref|XP_007209075.1| hypothetical protein PRUPE_ppa000981mg [Prunus persica]
gi|462404810|gb|EMJ10274.1| hypothetical protein
PRUPE_ppa000981mg [Prunus persica]
Length = 942
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/68 (57%), Positives = 55/68 (80%)
Frame = -2
Query: 205 DFSPISIITDDAKEEVGSKRKRVCGPDDMSQGVARAHQFLKDFAALPLEEMGLQQSLEQV 26
DFS ++I +DA EEVGSKRKR DDMS+G ARAH+FLK+F+ LPLE M L+++L++V
Sbjct: 862 DFSATAVIPNDAIEEVGSKRKREYDSDDMSRGSARAHEFLKEFSNLPLETMDLKEALQKV 921
Query: 25 RKLRNELE 2
K++N+L+
Sbjct: 922 SKMKNDLQ 929
>gb|EXC28067.1| DNA mismatch repair protein Msh2 [Morus notabilis]
Length = 992
Score = 82.0 bits (201), Expect = 8e-14
Identities = 37/68 (54%), Positives = 53/68 (77%)
Frame = -2
Query: 205 DFSPISIITDDAKEEVGSKRKRVCGPDDMSQGVARAHQFLKDFAALPLEEMGLQQSLEQV 26
DFSP +II++ K E GSKRKR C PDD+S+G ARAHQFLK+F+ LPLE+M +Q +E++
Sbjct: 912 DFSPNTIISNGFKHEAGSKRKRECDPDDISRGAARAHQFLKEFSELPLEKMDRKQIMEKI 971
Query: 25 RKLRNELE 2
L ++++
Sbjct: 972 SMLNDDMQ 979
>ref|XP_002463122.1| hypothetical protein SORBIDRAFT_02g038230 [Sorghum bicolor]
gi|241926499|gb|EER99643.1| hypothetical protein
SORBIDRAFT_02g038230 [Sorghum bicolor]
Length = 942
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/68 (52%), Positives = 52/68 (76%)
Frame = -2
Query: 205 DFSPISIITDDAKEEVGSKRKRVCGPDDMSQGVARAHQFLKDFAALPLEEMGLQQSLEQV 26
DFS +DD+K+EVGSKRKRV PDD+++G ARA FL+DFAALP++EM + +E V
Sbjct: 862 DFSTTPTFSDDSKDEVGSKRKRVFSPDDVTRGAARARLFLEDFAALPVDEMDRSKIVEMV 921
Query: 25 RKLRNELE 2
K++++L+
Sbjct: 922 TKMKSDLQ 929
>ref|XP_004299238.1| PREDICTED: DNA mismatch repair protein MSH2-like [Fragaria vesca
subsp. vesca]
Length = 942
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/68 (52%), Positives = 53/68 (77%)
Frame = -2
Query: 205 DFSPISIITDDAKEEVGSKRKRVCGPDDMSQGVARAHQFLKDFAALPLEEMGLQQSLEQV 26
DFSP +II +D +EEVGSKRKR DDMS+G A A +FLK+F+ +PL+ M +QQ+L+ V
Sbjct: 862 DFSPTAIIPNDPREEVGSKRKREYDSDDMSRGAALARKFLKEFSEMPLDTMDVQQALQIV 921
Query: 25 RKLRNELE 2
K++++L+
Sbjct: 922 NKMKDDLQ 929
>ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein MSH2-like [Glycine max]
Length = 942
Score = 75.9 bits (185), Expect = 6e-12
Identities = 38/68 (55%), Positives = 48/68 (70%)
Frame = -2
Query: 205 DFSPISIITDDAKEEVGSKRKRVCGPDDMSQGVARAHQFLKDFAALPLEEMGLQQSLEQV 26
DFSP + + +EVGSKRKR PDDMSQG A+A QFL+ F ALPLE M Q+L++V
Sbjct: 862 DFSPSATSLNHTTQEVGSKRKRAFEPDDMSQGAAKARQFLEAFVALPLETMDKMQALQEV 921
Query: 25 RKLRNELE 2
+KL + LE
Sbjct: 922 KKLTDTLE 929
>ref|XP_004508573.1| PREDICTED: DNA mismatch repair protein MSH2-like [Cicer arietinum]
Length = 942
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/68 (55%), Positives = 50/68 (73%)
Frame = -2
Query: 205 DFSPISIITDDAKEEVGSKRKRVCGPDDMSQGVARAHQFLKDFAALPLEEMGLQQSLEQV 26
DFSP +I D+ EE GSKRKR PDD+SQG A+A Q L+ F ALPLE M +Q+L++V
Sbjct: 862 DFSPSAISLIDSTEEEGSKRKREFEPDDVSQGAAKARQILEAFVALPLETMDKKQALQEV 921
Query: 25 RKLRNELE 2
+KL++ LE
Sbjct: 922 KKLKDNLE 929
>ref|NP_001146301.1| DNA mismatch repair protein MSH2 [Zea mays]
gi|11386957|sp|Q9XGC9.1|MSH2_MAIZE RecName: Full=DNA
mismatch repair protein MSH2; AltName: Full=MUS1
gi|4775576|emb|CAB42554.1| MUS1 protein [Zea mays]
gi|414887420|tpg|DAA63434.1| TPA: DNA mismatch repair
protein MSH2 [Zea mays]
Length = 942
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = -2
Query: 205 DFSPISIITDDAKEEVGSKRKRVCGPDDMSQGVARAHQFLKDFAALPLEEMGLQQSLEQV 26
DFS +DD K+EVGSKRKRV PDD+++G ARA FL++FAALP++EM + LE
Sbjct: 862 DFSTTPTFSDDLKDEVGSKRKRVFSPDDITRGAARARLFLEEFAALPMDEMDGSKILEMA 921
Query: 25 RKLRNELE 2
K++ +L+
Sbjct: 922 TKMKADLQ 929
>gb|ACL53653.1| unknown [Zea mays]
Length = 618
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = -2
Query: 205 DFSPISIITDDAKEEVGSKRKRVCGPDDMSQGVARAHQFLKDFAALPLEEMGLQQSLEQV 26
DFS +DD K+EVGSKRKRV PDD+++G ARA FL++FAALP++EM + LE
Sbjct: 538 DFSTTPTFSDDLKDEVGSKRKRVFSPDDITRGAARARLFLEEFAALPMDEMDGSKILEMA 597
Query: 25 RKLRNELE 2
K++ +L+
Sbjct: 598 TKMKADLQ 605
>ref|XP_002885262.1| hypothetical protein ARALYDRAFT_479358 [Arabidopsis lyrata subsp.
lyrata] gi|297331102|gb|EFH61521.1| hypothetical protein
ARALYDRAFT_479358 [Arabidopsis lyrata subsp. lyrata]
Length = 937
Score = 73.2 bits (178), Expect = 4e-11
Identities = 35/68 (51%), Positives = 54/68 (79%)
Frame = -2
Query: 205 DFSPISIITDDAKEEVGSKRKRVCGPDDMSQGVARAHQFLKDFAALPLEEMGLQQSLEQV 26
DFSP S+I ++ EE G ++ R PD++S+G ARAH+FLK+FAA+PL++M L+ SL++V
Sbjct: 859 DFSPSSMIVNN--EESGKRKSREDDPDEVSRGAARAHKFLKEFAAMPLDKMELKDSLQRV 916
Query: 25 RKLRNELE 2
R +++ELE
Sbjct: 917 RAMKDELE 924
>gb|AAD04176.1| mismatch repair protein [Arabidopsis thaliana]
Length = 937
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/68 (50%), Positives = 54/68 (79%)
Frame = -2
Query: 205 DFSPISIITDDAKEEVGSKRKRVCGPDDMSQGVARAHQFLKDFAALPLEEMGLQQSLEQV 26
DFSP S+I ++ EE G ++ R PD++S+G RAH+FLK+FAA+PL++M L+ SL++V
Sbjct: 859 DFSPSSMIINN--EESGKRKSREDDPDEVSRGAERAHKFLKEFAAMPLDKMELKDSLQRV 916
Query: 25 RKLRNELE 2
R++++ELE
Sbjct: 917 REMKDELE 924
>ref|NP_566804.3| DNA mismatch repair protein Msh2 [Arabidopsis thaliana]
gi|3914056|sp|O24617.1|MSH2_ARATH RecName: Full=DNA
mismatch repair protein MSH2; Short=AtMSH2; AltName:
Full=MutS protein homolog 2 gi|2522362|gb|AAB82649.1|
MutS homolog 2 [Arabidopsis thaliana]
gi|2522364|gb|AAB82650.1| MutS homolog 2 [Arabidopsis
thaliana] gi|2547236|gb|AAB81282.1| DNA mismatch repair
protein MSH2 [Arabidopsis thaliana]
gi|11994116|dbj|BAB01119.1| DNA mismatch repair protein
MSH2 [Arabidopsis thaliana] gi|332642591|gb|AEE76112.1|
DNA mismatch repair protein Msh2 [Arabidopsis thaliana]
Length = 937
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/68 (50%), Positives = 54/68 (79%)
Frame = -2
Query: 205 DFSPISIITDDAKEEVGSKRKRVCGPDDMSQGVARAHQFLKDFAALPLEEMGLQQSLEQV 26
DFSP S+I ++ EE G ++ R PD++S+G RAH+FLK+FAA+PL++M L+ SL++V
Sbjct: 859 DFSPSSMIINN--EESGKRKSREDDPDEVSRGAERAHKFLKEFAAIPLDKMELKDSLQRV 916
Query: 25 RKLRNELE 2
R++++ELE
Sbjct: 917 REMKDELE 924