BLASTX nr result
ID: Cocculus23_contig00008596
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00008596
(302 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006288273.1| hypothetical protein CARUB_v10001519mg [Caps... 60 2e-07
ref|XP_002867786.1| plant UBX domain-containing protein 3 [Arabi... 60 2e-07
ref|XP_006396709.1| hypothetical protein EUTSA_v10028833mg [Eutr... 60 4e-07
ref|XP_006413687.1| hypothetical protein EUTSA_v10025821mg [Eutr... 59 9e-07
gb|AAC28225.1| contains similarity to rat p47 protein (GB:AB0020... 58 2e-06
ref|XP_002872684.1| plant UBX domain-containing protein 4 [Arabi... 58 2e-06
ref|NP_567262.1| CDC48-interacting UBX-domain protein 4 [Arabido... 58 2e-06
ref|XP_006284158.1| hypothetical protein CARUB_v10005291mg [Caps... 57 2e-06
ref|XP_007026187.1| Plant UBX domain containing protein 4 [Theob... 57 3e-06
emb|CAB52871.1| putative protein [Arabidopsis thaliana] gi|72690... 57 3e-06
ref|NP_193946.2| CDC48-interacting UBX-domain protein PUX3 [Arab... 57 3e-06
ref|XP_006467372.1| PREDICTED: UBA and UBX domain-containing pro... 56 6e-06
ref|XP_006449810.1| hypothetical protein CICLE_v10016067mg [Citr... 56 6e-06
>ref|XP_006288273.1| hypothetical protein CARUB_v10001519mg [Capsella rubella]
gi|482556979|gb|EOA21171.1| hypothetical protein
CARUB_v10001519mg [Capsella rubella]
Length = 311
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/48 (66%), Positives = 38/48 (79%), Gaps = 2/48 (4%)
Frame = +2
Query: 161 MSSRYKKPAW--SGAGRIRTLTDLNRRTDPGSDSDSNGPEEN*TGGEK 298
MSS+ KKPA S G+IRTL+DLNRR+ P SDSDS+GP+E TGGEK
Sbjct: 1 MSSKDKKPAKPSSSRGKIRTLSDLNRRSGPDSDSDSDGPQEYYTGGEK 48
>ref|XP_002867786.1| plant UBX domain-containing protein 3 [Arabidopsis lyrata subsp.
lyrata] gi|297313622|gb|EFH44045.1| plant UBX
domain-containing protein 3 [Arabidopsis lyrata subsp.
lyrata]
Length = 302
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/49 (65%), Positives = 39/49 (79%), Gaps = 3/49 (6%)
Frame = +2
Query: 161 MSSRYKKPAWSGAGR---IRTLTDLNRRTDPGSDSDSNGPEEN*TGGEK 298
MSS+ KKPA +GR IRTL+DLNRR++P SDSDS+GP+E TGGEK
Sbjct: 1 MSSKDKKPAKPTSGRTGGIRTLSDLNRRSEPDSDSDSDGPQEYYTGGEK 49
>ref|XP_006396709.1| hypothetical protein EUTSA_v10028833mg [Eutrema salsugineum]
gi|557097726|gb|ESQ38162.1| hypothetical protein
EUTSA_v10028833mg [Eutrema salsugineum]
Length = 305
Score = 59.7 bits (143), Expect = 4e-07
Identities = 32/49 (65%), Positives = 38/49 (77%), Gaps = 3/49 (6%)
Frame = +2
Query: 161 MSSRYKKPAW---SGAGRIRTLTDLNRRTDPGSDSDSNGPEEN*TGGEK 298
MSS+ KKPA S G+IRTL+DLNRR+ P SDSDS+GP+E TGGEK
Sbjct: 1 MSSKDKKPARPSSSRVGKIRTLSDLNRRSGPDSDSDSDGPQEYYTGGEK 49
>ref|XP_006413687.1| hypothetical protein EUTSA_v10025821mg [Eutrema salsugineum]
gi|557114857|gb|ESQ55140.1| hypothetical protein
EUTSA_v10025821mg [Eutrema salsugineum]
Length = 304
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/49 (63%), Positives = 37/49 (75%), Gaps = 3/49 (6%)
Frame = +2
Query: 161 MSSRYKKPAWSGAGR---IRTLTDLNRRTDPGSDSDSNGPEEN*TGGEK 298
MSS+ KKP+ GR IRTL+DLNRR+ P SDSDS+GP+E TGGEK
Sbjct: 1 MSSKDKKPSKPSGGRTGHIRTLSDLNRRSGPDSDSDSDGPQEYFTGGEK 49
>gb|AAC28225.1| contains similarity to rat p47 protein (GB:AB002086) [Arabidopsis
thaliana] gi|7267177|emb|CAB77889.1| putative membrane
trafficking factor [Arabidopsis thaliana]
Length = 308
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/48 (64%), Positives = 37/48 (77%), Gaps = 2/48 (4%)
Frame = +2
Query: 161 MSSRYKKPAW--SGAGRIRTLTDLNRRTDPGSDSDSNGPEEN*TGGEK 298
MSS+ KKP+ S G IRTL+DLNRR+ P SDSDS+GP+E TGGEK
Sbjct: 1 MSSKDKKPSKPSSSRGGIRTLSDLNRRSGPDSDSDSDGPQEYYTGGEK 48
>ref|XP_002872684.1| plant UBX domain-containing protein 4 [Arabidopsis lyrata subsp.
lyrata] gi|297318521|gb|EFH48943.1| plant UBX
domain-containing protein 4 [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/48 (64%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
Frame = +2
Query: 161 MSSRYKKPAWSGAGR--IRTLTDLNRRTDPGSDSDSNGPEEN*TGGEK 298
MSS+ KKPA R IRTL+DLNRR+ P SDSDS+GP+E TGGEK
Sbjct: 1 MSSKDKKPARPSTSRGGIRTLSDLNRRSGPDSDSDSDGPQEYYTGGEK 48
>ref|NP_567262.1| CDC48-interacting UBX-domain protein 4 [Arabidopsis thaliana]
gi|20268692|gb|AAM14050.1| putative membrane trafficking
factor [Arabidopsis thaliana] gi|21553471|gb|AAM62564.1|
putative membrane trafficking factor [Arabidopsis
thaliana] gi|21689865|gb|AAM67493.1| putative membrane
trafficking factor [Arabidopsis thaliana]
gi|45862328|gb|AAS78926.1| CDC48-interacting UBX-domain
protein [Arabidopsis thaliana]
gi|332656974|gb|AEE82374.1| CDC48-interacting UBX-domain
protein 4 [Arabidopsis thaliana]
Length = 303
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/48 (64%), Positives = 37/48 (77%), Gaps = 2/48 (4%)
Frame = +2
Query: 161 MSSRYKKPAW--SGAGRIRTLTDLNRRTDPGSDSDSNGPEEN*TGGEK 298
MSS+ KKP+ S G IRTL+DLNRR+ P SDSDS+GP+E TGGEK
Sbjct: 1 MSSKDKKPSKPSSSRGGIRTLSDLNRRSGPDSDSDSDGPQEYYTGGEK 48
>ref|XP_006284158.1| hypothetical protein CARUB_v10005291mg [Capsella rubella]
gi|482552863|gb|EOA17056.1| hypothetical protein
CARUB_v10005291mg [Capsella rubella]
Length = 313
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/49 (61%), Positives = 37/49 (75%), Gaps = 3/49 (6%)
Frame = +2
Query: 161 MSSRYKKPAWSGAGR---IRTLTDLNRRTDPGSDSDSNGPEEN*TGGEK 298
M+S+ KKP+ GR IRTL+DLNRR+ P SDSDS+GP+E TGGEK
Sbjct: 12 MASKDKKPSKPATGRTGGIRTLSDLNRRSGPDSDSDSDGPQEYYTGGEK 60
>ref|XP_007026187.1| Plant UBX domain containing protein 4 [Theobroma cacao]
gi|508781553|gb|EOY28809.1| Plant UBX domain containing
protein 4 [Theobroma cacao]
Length = 306
Score = 57.0 bits (136), Expect = 3e-06
Identities = 32/50 (64%), Positives = 37/50 (74%), Gaps = 4/50 (8%)
Frame = +2
Query: 161 MSSRYKKPAW----SGAGRIRTLTDLNRRTDPGSDSDSNGPEEN*TGGEK 298
M+SR KKPA S AG IRTL+DLNRR+ P SDSDS+ P+E TGGEK
Sbjct: 1 MASRDKKPAKPSSSSRAGGIRTLSDLNRRSGPDSDSDSDSPQEYYTGGEK 50
>emb|CAB52871.1| putative protein [Arabidopsis thaliana] gi|7269060|emb|CAB79170.1|
putative protein [Arabidopsis thaliana]
gi|34146866|gb|AAQ62441.1| At4g22150 [Arabidopsis
thaliana] gi|45862326|gb|AAS78925.1| CDC48-interacting
UBX-domain protein [Arabidopsis thaliana]
gi|51970624|dbj|BAD44004.1| putative protein
[Arabidopsis thaliana]
Length = 302
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = +2
Query: 155 SAMSSRYKKPAWSGAGRIRTLTDLNRRTDPGSDSDSNGPEEN*TGGEK 298
S+ + KP G IRTL+DLNRR++P SDSDS+GP+E TGGEK
Sbjct: 2 SSKDKKLSKPTSGRTGGIRTLSDLNRRSEPDSDSDSDGPQEYFTGGEK 49
>ref|NP_193946.2| CDC48-interacting UBX-domain protein PUX3 [Arabidopsis thaliana]
gi|332659164|gb|AEE84564.1| CDC48-interacting UBX-domain
protein PUX3 [Arabidopsis thaliana]
Length = 367
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = +2
Query: 155 SAMSSRYKKPAWSGAGRIRTLTDLNRRTDPGSDSDSNGPEEN*TGGEK 298
S+ + KP G IRTL+DLNRR++P SDSDS+GP+E TGGEK
Sbjct: 67 SSKDKKLSKPTSGRTGGIRTLSDLNRRSEPDSDSDSDGPQEYFTGGEK 114
>ref|XP_006467372.1| PREDICTED: UBA and UBX domain-containing protein At4g15410-like
[Citrus sinensis]
Length = 304
Score = 55.8 bits (133), Expect = 6e-06
Identities = 31/49 (63%), Positives = 36/49 (73%), Gaps = 3/49 (6%)
Frame = +2
Query: 161 MSSRYKKPAW---SGAGRIRTLTDLNRRTDPGSDSDSNGPEEN*TGGEK 298
M+SR KKPA S AG IRTL+DLNRR+ P SDSD + P+E TGGEK
Sbjct: 1 MASRDKKPAKPSSSRAGGIRTLSDLNRRSGPDSDSDDDAPQEYYTGGEK 49
>ref|XP_006449810.1| hypothetical protein CICLE_v10016067mg [Citrus clementina]
gi|557552421|gb|ESR63050.1| hypothetical protein
CICLE_v10016067mg [Citrus clementina]
Length = 304
Score = 55.8 bits (133), Expect = 6e-06
Identities = 31/49 (63%), Positives = 36/49 (73%), Gaps = 3/49 (6%)
Frame = +2
Query: 161 MSSRYKKPAW---SGAGRIRTLTDLNRRTDPGSDSDSNGPEEN*TGGEK 298
M+SR KKPA S AG IRTL+DLNRR+ P SDSD + P+E TGGEK
Sbjct: 1 MASRDKKPAKPSSSRAGGIRTLSDLNRRSGPDSDSDDDAPQEYYTGGEK 49