BLASTX nr result
ID: Cocculus23_contig00008585
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00008585
(290 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007014074.1| Ribosomal L18p/L5e family protein isoform 2 ... 132 5e-29
ref|XP_007014073.1| Ribosomal L18p/L5e family protein isoform 1 ... 132 5e-29
ref|XP_002509912.1| 50S ribosomal protein L18, chloroplast precu... 130 2e-28
ref|XP_006478532.1| PREDICTED: 50S ribosomal protein L18, chloro... 130 2e-28
ref|XP_006441940.1| hypothetical protein CICLE_v10022561mg [Citr... 130 2e-28
ref|XP_004147640.1| PREDICTED: 50S ribosomal protein L18, chloro... 127 1e-27
ref|XP_004297049.1| PREDICTED: 50S ribosomal protein L18, chloro... 127 2e-27
ref|XP_007225963.1| hypothetical protein PRUPE_ppa012509mg [Prun... 127 2e-27
ref|XP_006349873.1| PREDICTED: 50S ribosomal protein L18, chloro... 126 3e-27
ref|XP_004252957.1| PREDICTED: 50S ribosomal protein L18, chloro... 126 3e-27
gb|EPS74009.1| hypothetical protein M569_00746, partial [Genlise... 125 5e-27
gb|AFK34990.1| unknown [Lotus japonicus] gi|388495768|gb|AFK3595... 123 3e-26
ref|XP_002270819.1| PREDICTED: 50S ribosomal protein L18, chloro... 122 7e-26
ref|XP_006306511.1| hypothetical protein CARUB_v10012508mg [Caps... 121 9e-26
ref|XP_006586621.1| PREDICTED: uncharacterized protein LOC100306... 121 1e-25
ref|NP_001236805.1| uncharacterized protein LOC100306308 [Glycin... 121 1e-25
gb|EXB26141.1| 50S ribosomal protein L18 [Morus notabilis] 119 3e-25
ref|XP_006388561.1| ribosomal protein L18 [Populus trichocarpa] ... 119 3e-25
ref|NP_175268.1| 50S ribosomal protein L18/L5e family protein [A... 119 4e-25
ref|XP_002891426.1| ribosomal protein L18 family protein [Arabid... 119 4e-25
>ref|XP_007014074.1| Ribosomal L18p/L5e family protein isoform 2 [Theobroma cacao]
gi|508784437|gb|EOY31693.1| Ribosomal L18p/L5e family
protein isoform 2 [Theobroma cacao]
Length = 139
Score = 132 bits (332), Expect = 5e-29
Identities = 66/95 (69%), Positives = 76/95 (80%)
Frame = +3
Query: 6 SLRPKPFLTIANRPSLLIEASTSTRTRRDDKQARHARIRKKVEGTSERPRLSVFRSNKHI 185
SL P+ + PS+L+ RTRR+D QARH+RIRKKVEGT +RPRL VFRSNKH+
Sbjct: 33 SLSPRLPCPHPSLPSILLNVQAKARTRREDCQARHSRIRKKVEGTPDRPRLCVFRSNKHL 92
Query: 186 YVQVIDDSKMHTLASASTMQKLVSEEFDYSAGPTI 290
YVQVIDDSKMHTLASASTMQK + EEFDYS+GPTI
Sbjct: 93 YVQVIDDSKMHTLASASTMQKPICEEFDYSSGPTI 127
>ref|XP_007014073.1| Ribosomal L18p/L5e family protein isoform 1 [Theobroma cacao]
gi|508784436|gb|EOY31692.1| Ribosomal L18p/L5e family
protein isoform 1 [Theobroma cacao]
Length = 176
Score = 132 bits (332), Expect = 5e-29
Identities = 66/95 (69%), Positives = 76/95 (80%)
Frame = +3
Query: 6 SLRPKPFLTIANRPSLLIEASTSTRTRRDDKQARHARIRKKVEGTSERPRLSVFRSNKHI 185
SL P+ + PS+L+ RTRR+D QARH+RIRKKVEGT +RPRL VFRSNKH+
Sbjct: 33 SLSPRLPCPHPSLPSILLNVQAKARTRREDCQARHSRIRKKVEGTPDRPRLCVFRSNKHL 92
Query: 186 YVQVIDDSKMHTLASASTMQKLVSEEFDYSAGPTI 290
YVQVIDDSKMHTLASASTMQK + EEFDYS+GPTI
Sbjct: 93 YVQVIDDSKMHTLASASTMQKPICEEFDYSSGPTI 127
>ref|XP_002509912.1| 50S ribosomal protein L18, chloroplast precursor, putative [Ricinus
communis] gi|223549811|gb|EEF51299.1| 50S ribosomal
protein L18, chloroplast precursor, putative [Ricinus
communis]
Length = 164
Score = 130 bits (327), Expect = 2e-28
Identities = 65/95 (68%), Positives = 76/95 (80%)
Frame = +3
Query: 6 SLRPKPFLTIANRPSLLIEASTSTRTRRDDKQARHARIRKKVEGTSERPRLSVFRSNKHI 185
S RP P +P + +T+TRR+++ ARH RIRKKVEGT ERPRLSVFRSNKH+
Sbjct: 24 SARPNP---TPIQPPRFLRIEANTKTRRENRTARHVRIRKKVEGTPERPRLSVFRSNKHL 80
Query: 186 YVQVIDDSKMHTLASASTMQKLVSEEFDYSAGPTI 290
YVQVIDDSKMHTLASASTMQK +SEEFDYS+GPT+
Sbjct: 81 YVQVIDDSKMHTLASASTMQKPISEEFDYSSGPTL 115
>ref|XP_006478532.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Citrus
sinensis]
Length = 171
Score = 130 bits (326), Expect = 2e-28
Identities = 63/83 (75%), Positives = 75/83 (90%), Gaps = 1/83 (1%)
Frame = +3
Query: 45 PSL-LIEASTSTRTRRDDKQARHARIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHT 221
PSL ++EAST RT+R+D+ ARH+RIRKK++GT ERPRL VFRSNKH+YVQVIDD+KMHT
Sbjct: 40 PSLFIVEASTRPRTKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHT 99
Query: 222 LASASTMQKLVSEEFDYSAGPTI 290
LASASTMQK +SEE DYS+GPTI
Sbjct: 100 LASASTMQKPISEELDYSSGPTI 122
>ref|XP_006441940.1| hypothetical protein CICLE_v10022561mg [Citrus clementina]
gi|557544202|gb|ESR55180.1| hypothetical protein
CICLE_v10022561mg [Citrus clementina]
Length = 171
Score = 130 bits (326), Expect = 2e-28
Identities = 66/96 (68%), Positives = 80/96 (83%), Gaps = 1/96 (1%)
Frame = +3
Query: 6 SLRPKPFLTIANRPSL-LIEASTSTRTRRDDKQARHARIRKKVEGTSERPRLSVFRSNKH 182
S RP+P PSL ++EAST RT+R+D+ ARH+RIRKK++GT ERPRL VFRSNKH
Sbjct: 32 SRRPRPA-----PPSLFIVEASTRPRTKREDRTARHSRIRKKIDGTPERPRLCVFRSNKH 86
Query: 183 IYVQVIDDSKMHTLASASTMQKLVSEEFDYSAGPTI 290
+YVQVIDD+KMHTLASASTMQK +S+E DYS+GPTI
Sbjct: 87 LYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTI 122
>ref|XP_004147640.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Cucumis
sativus] gi|449498793|ref|XP_004160635.1| PREDICTED: 50S
ribosomal protein L18, chloroplastic-like [Cucumis
sativus]
Length = 170
Score = 127 bits (320), Expect = 1e-27
Identities = 64/90 (71%), Positives = 76/90 (84%)
Frame = +3
Query: 21 PFLTIANRPSLLIEASTSTRTRRDDKQARHARIRKKVEGTSERPRLSVFRSNKHIYVQVI 200
P + + R SL++EA +TR R+D+ ARH+RIRKKVEGT+ERPRLSVFRSNKH+YVQVI
Sbjct: 34 PTTSSSGRHSLVVEAKATTR--REDRTARHSRIRKKVEGTTERPRLSVFRSNKHLYVQVI 91
Query: 201 DDSKMHTLASASTMQKLVSEEFDYSAGPTI 290
DDSKMHTLA+ STMQK +SE DYSAGPTI
Sbjct: 92 DDSKMHTLAAVSTMQKSISEGLDYSAGPTI 121
>ref|XP_004297049.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 159
Score = 127 bits (319), Expect = 2e-27
Identities = 67/97 (69%), Positives = 80/97 (82%), Gaps = 3/97 (3%)
Frame = +3
Query: 9 LRPKPFLTIANRP---SLLIEASTSTRTRRDDKQARHARIRKKVEGTSERPRLSVFRSNK 179
+RPK A +P SL+IEA +T+ R+D+ ARH RIRKKVEGT+ERPRL VFRSNK
Sbjct: 16 MRPKFVGVSAPKPQSQSLVIEAKATTK--REDRTARHIRIRKKVEGTTERPRLCVFRSNK 73
Query: 180 HIYVQVIDDSKMHTLASASTMQKLVSEEFDYSAGPTI 290
H+YVQVIDD+KMHTLASASTMQK +SEEFDY++GPTI
Sbjct: 74 HLYVQVIDDTKMHTLASASTMQKPISEEFDYTSGPTI 110
>ref|XP_007225963.1| hypothetical protein PRUPE_ppa012509mg [Prunus persica]
gi|462422899|gb|EMJ27162.1| hypothetical protein
PRUPE_ppa012509mg [Prunus persica]
Length = 166
Score = 127 bits (319), Expect = 2e-27
Identities = 66/96 (68%), Positives = 78/96 (81%)
Frame = +3
Query: 3 TSLRPKPFLTIANRPSLLIEASTSTRTRRDDKQARHARIRKKVEGTSERPRLSVFRSNKH 182
T+L P+P SL++EA +T+ R+D+ ARH RIRKKVEGT ERPRL+VFRSNKH
Sbjct: 29 TTLSPRP-----QSQSLVVEAKATTK--REDRTARHIRIRKKVEGTPERPRLAVFRSNKH 81
Query: 183 IYVQVIDDSKMHTLASASTMQKLVSEEFDYSAGPTI 290
IY QVIDD+KMHTLASASTMQK VS+EFDY+AGPTI
Sbjct: 82 IYAQVIDDTKMHTLASASTMQKPVSDEFDYTAGPTI 117
>ref|XP_006349873.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Solanum
tuberosum]
Length = 162
Score = 126 bits (317), Expect = 3e-27
Identities = 61/81 (75%), Positives = 68/81 (83%)
Frame = +3
Query: 45 PSLLIEASTSTRTRRDDKQARHARIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTL 224
P ++ +TRR+D+ ARH RIRKKVEGT ERPR+ VFRSNKHIYVQVIDDSKMHTL
Sbjct: 32 PIRVLTVEAKAKTRREDRTARHIRIRKKVEGTPERPRMCVFRSNKHIYVQVIDDSKMHTL 91
Query: 225 ASASTMQKLVSEEFDYSAGPT 287
ASASTMQK +SEEFDYSAGPT
Sbjct: 92 ASASTMQKPISEEFDYSAGPT 112
>ref|XP_004252957.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Solanum
lycopersicum]
Length = 162
Score = 126 bits (317), Expect = 3e-27
Identities = 61/81 (75%), Positives = 68/81 (83%)
Frame = +3
Query: 45 PSLLIEASTSTRTRRDDKQARHARIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTL 224
P ++ +TRR+D+ ARH RIRKKVEGT ERPR+ VFRSNKHIYVQVIDDSKMHTL
Sbjct: 32 PIRVLTVEAKAKTRREDRTARHIRIRKKVEGTPERPRMCVFRSNKHIYVQVIDDSKMHTL 91
Query: 225 ASASTMQKLVSEEFDYSAGPT 287
ASASTMQK +SEEFDYSAGPT
Sbjct: 92 ASASTMQKPISEEFDYSAGPT 112
>gb|EPS74009.1| hypothetical protein M569_00746, partial [Genlisea aurea]
Length = 125
Score = 125 bits (315), Expect = 5e-27
Identities = 60/75 (80%), Positives = 69/75 (92%)
Frame = +3
Query: 66 STSTRTRRDDKQARHARIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLASASTMQ 245
+ +RTRR+D+ ARH+RIRKKVEGT ERPRLSVFRSNKH+Y QVIDDSKMHTLASAST+Q
Sbjct: 2 AAQSRTRREDRAARHSRIRKKVEGTPERPRLSVFRSNKHLYAQVIDDSKMHTLASASTVQ 61
Query: 246 KLVSEEFDYSAGPTI 290
K VS+EFDYS+GPTI
Sbjct: 62 KPVSDEFDYSSGPTI 76
>gb|AFK34990.1| unknown [Lotus japonicus] gi|388495768|gb|AFK35950.1| unknown
[Lotus japonicus]
Length = 162
Score = 123 bits (308), Expect = 3e-26
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +3
Query: 39 NRPSLLIEASTSTRTRRDDKQARHARIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMH 218
N SL +RTR DD+ ARHARIRKKVEGT ERPRL+VFRSNKH+ VQVIDD+KMH
Sbjct: 30 NPNSLPFVVEAKSRTRTDDRTARHARIRKKVEGTPERPRLAVFRSNKHLAVQVIDDTKMH 89
Query: 219 TLASASTMQKLVSEEFDYSAGPTI 290
TLASASTMQK ++EEF Y+AGPTI
Sbjct: 90 TLASASTMQKAIAEEFSYTAGPTI 113
>ref|XP_002270819.1| PREDICTED: 50S ribosomal protein L18, chloroplastic isoform 1
[Vitis vinifera] gi|189096139|pdb|3BBO|Q Chain Q,
Homology Model For The Spinach Chloroplast 50s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
gi|147854297|emb|CAN83428.1| hypothetical protein
VITISV_034871 [Vitis vinifera]
gi|297736841|emb|CBI26042.3| unnamed protein product
[Vitis vinifera]
Length = 161
Score = 122 bits (305), Expect = 7e-26
Identities = 61/79 (77%), Positives = 68/79 (86%)
Frame = +3
Query: 54 LIEASTSTRTRRDDKQARHARIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLASA 233
+IEA +TRR+D+ ARH RIRKKVEGT ERPRL VFRSNKH+YVQVIDDSKMHTLASA
Sbjct: 36 IIEAKA--KTRREDRTARHVRIRKKVEGTPERPRLCVFRSNKHLYVQVIDDSKMHTLASA 93
Query: 234 STMQKLVSEEFDYSAGPTI 290
STMQK +SEE DYS+ PTI
Sbjct: 94 STMQKSISEELDYSSSPTI 112
>ref|XP_006306511.1| hypothetical protein CARUB_v10012508mg [Capsella rubella]
gi|482575222|gb|EOA39409.1| hypothetical protein
CARUB_v10012508mg [Capsella rubella]
Length = 171
Score = 121 bits (304), Expect = 9e-26
Identities = 59/91 (64%), Positives = 74/91 (81%)
Frame = +3
Query: 18 KPFLTIANRPSLLIEASTSTRTRRDDKQARHARIRKKVEGTSERPRLSVFRSNKHIYVQV 197
KP+ + ++ S + + T+T +D+ ARH+RIRKKV GT+ERPRL VFRSNKH+YVQV
Sbjct: 32 KPWSSSSSLQSRSLVVESKTKTSSEDRIARHSRIRKKVNGTTERPRLCVFRSNKHLYVQV 91
Query: 198 IDDSKMHTLASASTMQKLVSEEFDYSAGPTI 290
IDDSKMHTLASAST QK +SEEFDY++GPTI
Sbjct: 92 IDDSKMHTLASASTKQKPISEEFDYTSGPTI 122
>ref|XP_006586621.1| PREDICTED: uncharacterized protein LOC100306308 isoform X1 [Glycine
max]
Length = 162
Score = 121 bits (303), Expect = 1e-25
Identities = 60/81 (74%), Positives = 67/81 (82%)
Frame = +3
Query: 48 SLLIEASTSTRTRRDDKQARHARIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA 227
SL RTRR+D+ ARH RIRKKVEGT ERPRLSVFRSNKH+ VQVIDD+KMHTLA
Sbjct: 31 SLPFVLEAKDRTRREDRSARHTRIRKKVEGTPERPRLSVFRSNKHLSVQVIDDTKMHTLA 90
Query: 228 SASTMQKLVSEEFDYSAGPTI 290
S STMQK V+EEF+YSAGPT+
Sbjct: 91 SISTMQKTVAEEFNYSAGPTL 111
>ref|NP_001236805.1| uncharacterized protein LOC100306308 [Glycine max]
gi|255628163|gb|ACU14426.1| unknown [Glycine max]
Length = 160
Score = 121 bits (303), Expect = 1e-25
Identities = 60/81 (74%), Positives = 67/81 (82%)
Frame = +3
Query: 48 SLLIEASTSTRTRRDDKQARHARIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA 227
SL RTRR+D+ ARH RIRKKVEGT ERPRLSVFRSNKH+ VQVIDD+KMHTLA
Sbjct: 31 SLPFVLEAKDRTRREDRSARHTRIRKKVEGTPERPRLSVFRSNKHLSVQVIDDTKMHTLA 90
Query: 228 SASTMQKLVSEEFDYSAGPTI 290
S STMQK V+EEF+YSAGPT+
Sbjct: 91 SISTMQKTVAEEFNYSAGPTL 111
>gb|EXB26141.1| 50S ribosomal protein L18 [Morus notabilis]
Length = 161
Score = 119 bits (299), Expect = 3e-25
Identities = 58/81 (71%), Positives = 72/81 (88%)
Frame = +3
Query: 48 SLLIEASTSTRTRRDDKQARHARIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA 227
SL++EA +TR++D+ ARH+RIRKKVEGT ERPRLSVFRSNKH+YVQVIDD+KM TLA
Sbjct: 34 SLVVEAKA--KTRQEDRIARHSRIRKKVEGTPERPRLSVFRSNKHLYVQVIDDTKMRTLA 91
Query: 228 SASTMQKLVSEEFDYSAGPTI 290
+ASTMQK +SEEF Y++GPT+
Sbjct: 92 AASTMQKAISEEFSYTSGPTL 112
>ref|XP_006388561.1| ribosomal protein L18 [Populus trichocarpa]
gi|118487426|gb|ABK95541.1| unknown [Populus
trichocarpa] gi|550310400|gb|ERP47475.1| ribosomal
protein L18 [Populus trichocarpa]
Length = 165
Score = 119 bits (299), Expect = 3e-25
Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
Frame = +3
Query: 45 PSL-LIEASTSTRTRRDDKQARHARIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHT 221
PSL + +TRR+D+ ARH RIRKKVEGT +RPRL VFRSNKH+YVQVIDD+KMHT
Sbjct: 34 PSLSFVTVEAKAKTRREDRTARHIRIRKKVEGTPDRPRLCVFRSNKHLYVQVIDDTKMHT 93
Query: 222 LASASTMQKLVSEEFDYSAGPTI 290
LASASTMQK +++FDYS+GPTI
Sbjct: 94 LASASTMQKPFAQDFDYSSGPTI 116
>ref|NP_175268.1| 50S ribosomal protein L18/L5e family protein [Arabidopsis thaliana]
gi|73621536|sp|Q9SX68.1|RK18_ARATH RecName: Full=50S
ribosomal protein L18, chloroplastic; AltName:
Full=CL18; Flags: Precursor
gi|5733872|gb|AAD49760.1|AC007932_8 Similar to 50S
Ribosomal protein L18 from Thermotoga maritima
gb|AE001798. ESTs gb|AI993387, gb|T75951 and gb|T22182
come from this gene [Arabidopsis thaliana]
gi|12484209|gb|AAG54003.1|AF336922_1 putative ribosomal
protein L18 [Arabidopsis thaliana]
gi|110740956|dbj|BAE98573.1| hypothetical protein
[Arabidopsis thaliana] gi|332194156|gb|AEE32277.1| 50S
ribosomal protein L18/L5e family protein [Arabidopsis
thaliana]
Length = 170
Score = 119 bits (298), Expect = 4e-25
Identities = 61/94 (64%), Positives = 78/94 (82%)
Frame = +3
Query: 9 LRPKPFLTIANRPSLLIEASTSTRTRRDDKQARHARIRKKVEGTSERPRLSVFRSNKHIY 188
L+P ++ +R S+++EA T T + +D+ ARH+RIRKKV GT+ERPRL VFRSNKH+Y
Sbjct: 31 LKPWSSSSLQSR-SMVVEAKTKTSS--EDRIARHSRIRKKVNGTTERPRLCVFRSNKHLY 87
Query: 189 VQVIDDSKMHTLASASTMQKLVSEEFDYSAGPTI 290
VQVIDD+KMHTLASAST QK +SEEFDY++GPTI
Sbjct: 88 VQVIDDTKMHTLASASTKQKPISEEFDYTSGPTI 121
>ref|XP_002891426.1| ribosomal protein L18 family protein [Arabidopsis lyrata subsp.
lyrata] gi|297337268|gb|EFH67685.1| ribosomal protein
L18 family protein [Arabidopsis lyrata subsp. lyrata]
Length = 170
Score = 119 bits (298), Expect = 4e-25
Identities = 61/94 (64%), Positives = 78/94 (82%)
Frame = +3
Query: 9 LRPKPFLTIANRPSLLIEASTSTRTRRDDKQARHARIRKKVEGTSERPRLSVFRSNKHIY 188
L+P ++ +R S+++EA T T + +D+ ARH+RIRKKV GT+ERPRL VFRSNKH+Y
Sbjct: 31 LKPWSSSSLQSR-SMVVEAKTKTSS--EDRIARHSRIRKKVNGTTERPRLCVFRSNKHLY 87
Query: 189 VQVIDDSKMHTLASASTMQKLVSEEFDYSAGPTI 290
VQVIDD+KMHTLASAST QK +SEEFDY++GPTI
Sbjct: 88 VQVIDDTKMHTLASASTKQKPISEEFDYTSGPTI 121