BLASTX nr result
ID: Cocculus23_contig00007748
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00007748
(247 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex s... 92 6e-17
gb|ACU23412.1| unknown [Glycine max] 92 6e-17
ref|XP_003569731.1| PREDICTED: H/ACA ribonucleoprotein complex s... 91 2e-16
ref|XP_006396764.1| hypothetical protein EUTSA_v10028535mg [Eutr... 86 5e-15
ref|XP_006396760.1| hypothetical protein EUTSA_v10029296mg [Eutr... 86 5e-15
ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex s... 86 5e-15
gb|EMT07357.1| H/ACA ribonucleoprotein complex subunit 4 [Aegilo... 85 1e-14
ref|XP_006658871.1| PREDICTED: H/ACA ribonucleoprotein complex s... 84 3e-14
gb|EMS59226.1| H/ACA ribonucleoprotein complex subunit 4 [Tritic... 84 3e-14
ref|XP_003531534.2| PREDICTED: H/ACA ribonucleoprotein complex s... 83 3e-14
ref|XP_004137598.1| PREDICTED: H/ACA ribonucleoprotein complex s... 83 5e-14
ref|XP_007148382.1| hypothetical protein PHAVU_006G203800g [Phas... 82 8e-14
gb|EMT10702.1| H/ACA ribonucleoprotein complex subunit 4 [Aegilo... 82 8e-14
gb|AAK83589.1| AT3g57150/F24I3_230 [Arabidopsis thaliana] 82 8e-14
ref|NP_191274.1| putative pseudouridine synthase NAP57 [Arabidop... 82 8e-14
ref|XP_004958447.1| PREDICTED: H/ACA ribonucleoprotein complex s... 82 1e-13
ref|XP_006491562.1| PREDICTED: H/ACA ribonucleoprotein complex s... 81 1e-13
ref|XP_007028578.1| NAP57 isoform 2 [Theobroma cacao] gi|5087171... 81 1e-13
ref|XP_007028577.1| NAP57 isoform 1 [Theobroma cacao] gi|5087171... 81 1e-13
ref|XP_002457587.1| hypothetical protein SORBIDRAFT_03g009870 [S... 81 1e-13
>ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine
max]
Length = 589
Score = 92.4 bits (228), Expect = 6e-17
Identities = 49/82 (59%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = -3
Query: 245 LDKHGKRNEKTPVEWLRNVVFPTGGDAMVAEHAAASEPSMAVDDGHKNENESGGHKRKLD 66
LDKHGK NEKTP EWLRN+V PTGGD+++A AAA EP D K E + G KRK
Sbjct: 395 LDKHGKPNEKTPQEWLRNLVLPTGGDSVIAGLAAAPEPE--DDKIQKKEGDGEGKKRKKH 452
Query: 65 ES-GSPAPIPSKKLKVDEVEEI 3
ES SP +P+KK+KVDEVEE+
Sbjct: 453 ESTDSPVAVPAKKVKVDEVEEV 474
>gb|ACU23412.1| unknown [Glycine max]
Length = 257
Score = 92.4 bits (228), Expect = 6e-17
Identities = 49/82 (59%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = -3
Query: 245 LDKHGKRNEKTPVEWLRNVVFPTGGDAMVAEHAAASEPSMAVDDGHKNENESGGHKRKLD 66
LDKHGK NEKTP EWLRN+V PTGGD+++A AAA EP D K E + G KRK
Sbjct: 63 LDKHGKPNEKTPQEWLRNLVLPTGGDSVIAGLAAAPEPE--DDKIQKKEGDGEGKKRKKH 120
Query: 65 ES-GSPAPIPSKKLKVDEVEEI 3
ES SP +P+KK+KVDEVEE+
Sbjct: 121 ESTDSPVAVPAKKVKVDEVEEV 142
>ref|XP_003569731.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like
[Brachypodium distachyon]
Length = 591
Score = 90.5 bits (223), Expect = 2e-16
Identities = 49/88 (55%), Positives = 57/88 (64%), Gaps = 8/88 (9%)
Frame = -3
Query: 245 LDKHGKRNEKTPVEWLRNVVFPTGGDAMVAEHAAASEPSMA----VDDGHKNENE----S 90
LDKHGK EKTP EWLRNVV PTGGDAM+A AAA EP D KN++E
Sbjct: 413 LDKHGKPTEKTPAEWLRNVVLPTGGDAMIASIAAAPEPEKVKVEQADVKEKNKHEEDKAD 472
Query: 89 GGHKRKLDESGSPAPIPSKKLKVDEVEE 6
GG KRK+DE + A P+KK+K +EV E
Sbjct: 473 GGRKRKVDEDDASASTPAKKIKSEEVIE 500
>ref|XP_006396764.1| hypothetical protein EUTSA_v10028535mg [Eutrema salsugineum]
gi|557097781|gb|ESQ38217.1| hypothetical protein
EUTSA_v10028535mg [Eutrema salsugineum]
Length = 583
Score = 85.9 bits (211), Expect = 5e-15
Identities = 49/83 (59%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
Frame = -3
Query: 245 LDKHGKRNEKTPVEWLRNVVFPTGGDAMVAEHAAASEPSMAVDDGHKNENESG----GHK 78
LDKHGK NEKTPVEW RNVV PTGGDAM+A AAA E D K E E+G K
Sbjct: 380 LDKHGKPNEKTPVEWSRNVVLPTGGDAMIAGAAAAPE-----KDEKKVEAENGEAGEARK 434
Query: 77 RKLDESGSPAPIPSKKLKVDEVE 9
RK D + SPAP+ +KK K EVE
Sbjct: 435 RKHDGNDSPAPVSTKKAKTKEVE 457
>ref|XP_006396760.1| hypothetical protein EUTSA_v10029296mg [Eutrema salsugineum]
gi|557097777|gb|ESQ38213.1| hypothetical protein
EUTSA_v10029296mg [Eutrema salsugineum]
Length = 550
Score = 85.9 bits (211), Expect = 5e-15
Identities = 49/83 (59%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
Frame = -3
Query: 245 LDKHGKRNEKTPVEWLRNVVFPTGGDAMVAEHAAASEPSMAVDDGHKNENESG----GHK 78
LDKHGK NEKTPVEW RNVV PTGGDAM+A AAA E D K E E+G K
Sbjct: 380 LDKHGKPNEKTPVEWSRNVVLPTGGDAMIAGAAAAPE-----KDEKKVEAENGEAGEARK 434
Query: 77 RKLDESGSPAPIPSKKLKVDEVE 9
RK D + SPAP+ +KK K EVE
Sbjct: 435 RKHDGNDSPAPVSTKKAKTKEVE 457
>ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Vitis
vinifera]
Length = 586
Score = 85.9 bits (211), Expect = 5e-15
Identities = 45/82 (54%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Frame = -3
Query: 245 LDKHGKRNEKTPVEWLRNVVFPTGGDAMVAEHAAASEPSMAVDDGHKNENESGGHKRKLD 66
L+KHGK NE TP EWLRNVV PTGGD+MVA AAA EP++ + K E + KRKL+
Sbjct: 401 LNKHGKPNENTPSEWLRNVVLPTGGDSMVASLAAAVEPTVKAETDVKEEIDGEQRKRKLN 460
Query: 65 ES-GSPAPIPSKKLKVDEVEEI 3
ES P +P+KK+K E+EE+
Sbjct: 461 ESTDDPVTVPAKKIK-KEIEEV 481
>gb|EMT07357.1| H/ACA ribonucleoprotein complex subunit 4 [Aegilops tauschii]
Length = 572
Score = 84.7 bits (208), Expect = 1e-14
Identities = 46/83 (55%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = -3
Query: 245 LDKHGKRNEKTPVEWLRNVVFPTGGDAMVAEHAAASEP---SMAVDDGHKNENESGGHKR 75
LDKHGK EKTP EWLRNVV PTGGDAM+A AAA EP + D +E KR
Sbjct: 379 LDKHGKPTEKTPAEWLRNVVLPTGGDAMIASLAAAPEPEKVKVEQQDVVPSEQVKEKKKR 438
Query: 74 KLDESGSPAPIPSKKLKVDEVEE 6
K DE A P+KK+KV+EV E
Sbjct: 439 KTDEDDVTASTPAKKMKVEEVTE 461
>ref|XP_006658871.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Oryza
brachyantha]
Length = 534
Score = 83.6 bits (205), Expect = 3e-14
Identities = 46/98 (46%), Positives = 60/98 (61%), Gaps = 18/98 (18%)
Frame = -3
Query: 245 LDKHGKRNEKTPVEWLRNVVFPTGGDAMVAEHAAA-------SEPSMAVDD--------- 114
LDKHGK NEKTP EWLRNV PTGGDAM+A AAA +EP + V +
Sbjct: 346 LDKHGKPNEKTPAEWLRNVALPTGGDAMIASIAAAPEEAKVKAEPDVVVTEEVKEKKKKK 405
Query: 113 GHKNENESG--GHKRKLDESGSPAPIPSKKLKVDEVEE 6
HK+E ++ G KRK+++ + A +P KK+KV+E E
Sbjct: 406 KHKDEEDASDEGRKRKIEDDDAAASVPVKKIKVEESAE 443
>gb|EMS59226.1| H/ACA ribonucleoprotein complex subunit 4 [Triticum urartu]
Length = 519
Score = 83.6 bits (205), Expect = 3e-14
Identities = 45/83 (54%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = -3
Query: 245 LDKHGKRNEKTPVEWLRNVVFPTGGDAMVAEHAAASEP---SMAVDDGHKNENESGGHKR 75
LDKHGK EKTP EWLRNVV PTGGDAM+A AAA EP + D +E +R
Sbjct: 326 LDKHGKPTEKTPAEWLRNVVLPTGGDAMIASLAAAPEPEKVKVEQQDVVPSEEVKEKKRR 385
Query: 74 KLDESGSPAPIPSKKLKVDEVEE 6
K DE A P+KK+KV+EV E
Sbjct: 386 KTDEDDVTASTPAKKMKVEEVTE 408
>ref|XP_003531534.2| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine
max]
Length = 580
Score = 83.2 bits (204), Expect = 3e-14
Identities = 50/85 (58%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Frame = -3
Query: 245 LDKHGKRNEKTPVEWLRNVVFPTGGDAMVAEHAAASEPSMAVDD--GHKNENESGGHKRK 72
LDKHGK NEKTP EWLRN+V PTGGD+M+A AAA EP DD K E + G KRK
Sbjct: 387 LDKHGKPNEKTPQEWLRNLVLPTGGDSMIAGLAAAPEPE---DDKLQKKEEGDGEGKKRK 443
Query: 71 LDES-GSPAPIPSKKLK-VDEVEEI 3
ES S +P+KK K VDEVEE+
Sbjct: 444 KHESTDSLVAVPAKKAKVVDEVEEL 468
>ref|XP_004137598.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like, partial
[Cucumis sativus]
Length = 564
Score = 82.8 bits (203), Expect = 5e-14
Identities = 44/85 (51%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Frame = -3
Query: 245 LDKHGKRNEKTPVEWLRNVVFPTGGDAMVA----EHAAASEPSMAVDDGHKNENESGGHK 78
LDKHGK NE TP EW+RN+V PTGGD +VA +A ++P+ A + G + GG K
Sbjct: 386 LDKHGKPNENTPQEWMRNLVLPTGGDVLVASAFVSDSATAKPTAAEESG----KDDGGRK 441
Query: 77 RKLDESGSPAPIPSKKLKVDEVEEI 3
RKLDE A P+KKLK +EVEE+
Sbjct: 442 RKLDEETEAA--PAKKLKTEEVEEV 464
>ref|XP_007148382.1| hypothetical protein PHAVU_006G203800g [Phaseolus vulgaris]
gi|561021605|gb|ESW20376.1| hypothetical protein
PHAVU_006G203800g [Phaseolus vulgaris]
Length = 571
Score = 82.0 bits (201), Expect = 8e-14
Identities = 42/81 (51%), Positives = 56/81 (69%)
Frame = -3
Query: 245 LDKHGKRNEKTPVEWLRNVVFPTGGDAMVAEHAAASEPSMAVDDGHKNENESGGHKRKLD 66
LDKHGK NEKTP EWLRN+V PTGGD+++A AAA EP + K+ + G ++K +
Sbjct: 391 LDKHGKPNEKTPQEWLRNLVLPTGGDSVIAGMAAAPEP-----EDEKDGDGEGRKRKKHE 445
Query: 65 ESGSPAPIPSKKLKVDEVEEI 3
+ SP +P+KK KVD VEE+
Sbjct: 446 STDSPVSVPAKKAKVD-VEEV 465
>gb|EMT10702.1| H/ACA ribonucleoprotein complex subunit 4 [Aegilops tauschii]
Length = 599
Score = 82.0 bits (201), Expect = 8e-14
Identities = 44/83 (53%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Frame = -3
Query: 245 LDKHGKRNEKTPVEWLRNVVFPTGGDAMVAEHAAASEP---SMAVDDGHKNENESGGHKR 75
LDKHGK +KTP EWLRNVV PTGGDAM+A AAA EP + D +E KR
Sbjct: 430 LDKHGKPTDKTPAEWLRNVVLPTGGDAMIASIAAAPEPEKVKVEQQDVVPSEEVKEKKKR 489
Query: 74 KLDESGSPAPIPSKKLKVDEVEE 6
K DE P+KK+KV+EV E
Sbjct: 490 KTDEDDVTGSTPAKKMKVEEVTE 512
>gb|AAK83589.1| AT3g57150/F24I3_230 [Arabidopsis thaliana]
Length = 164
Score = 82.0 bits (201), Expect = 8e-14
Identities = 44/79 (55%), Positives = 50/79 (63%)
Frame = -3
Query: 245 LDKHGKRNEKTPVEWLRNVVFPTGGDAMVAEHAAASEPSMAVDDGHKNENESGGHKRKLD 66
LDKHGK NEKTPVEW RNVV PTGGDA++A AAA E A D E ++ D
Sbjct: 2 LDKHGKPNEKTPVEWSRNVVLPTGGDAIIAGAAAAPEEIKA--DAENGEAGEARKRKHDD 59
Query: 65 ESGSPAPIPSKKLKVDEVE 9
S SPAP+ +KK K EVE
Sbjct: 60 SSDSPAPVTTKKSKTKEVE 78
>ref|NP_191274.1| putative pseudouridine synthase NAP57 [Arabidopsis thaliana]
gi|67460428|sp|Q9LD90.1|CBF5_ARATH RecName: Full=H/ACA
ribonucleoprotein complex subunit 4; AltName: Full=CBF5
homolog; AltName: Full=Dyskerin; AltName:
Full=Nopp-140-associated protein of 57 kDa homolog;
Short=AtNAP57; AltName: Full=Nucleolar protein NAP57
homolog gi|8901186|gb|AAF43210.2|AF234984_1 putative
pseudouridine synthase [Arabidopsis thaliana]
gi|6911885|emb|CAB72185.1| putative protein [Arabidopsis
thaliana] gi|28392852|gb|AAO41863.1| unknown protein
[Arabidopsis thaliana] gi|225898727|dbj|BAH30494.1|
hypothetical protein [Arabidopsis thaliana]
gi|332646100|gb|AEE79621.1| putative pseudouridine
synthase NAP57 [Arabidopsis thaliana]
Length = 565
Score = 82.0 bits (201), Expect = 8e-14
Identities = 44/79 (55%), Positives = 50/79 (63%)
Frame = -3
Query: 245 LDKHGKRNEKTPVEWLRNVVFPTGGDAMVAEHAAASEPSMAVDDGHKNENESGGHKRKLD 66
LDKHGK NEKTPVEW RNVV PTGGDA++A AAA E A D E ++ D
Sbjct: 389 LDKHGKPNEKTPVEWSRNVVLPTGGDAIIAGAAAAPEEIKA--DAENGEAGEARKRKHDD 446
Query: 65 ESGSPAPIPSKKLKVDEVE 9
S SPAP+ +KK K EVE
Sbjct: 447 SSDSPAPVTTKKSKTKEVE 465
>ref|XP_004958447.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Setaria
italica]
Length = 581
Score = 81.6 bits (200), Expect = 1e-13
Identities = 46/84 (54%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Frame = -3
Query: 245 LDKHGKRNEKTPVEWLRNVVFPTGGDAMVAEHAAASEPSMA-VDDGHKNENESGGHKRKL 69
LDKHGK NEKTP EWLRNVV PTGGD +A AAA EP A V+ E KRK
Sbjct: 409 LDKHGKPNEKTPAEWLRNVVLPTGGDVSIASIAAAPEPEKAKVEQDAVGGEEVKEKKRKK 468
Query: 68 DESG--SPAPIPSKKLKVDEVEEI 3
DE A IP KK+KV+E E+
Sbjct: 469 DEENDDGDASIPVKKIKVEEAAEV 492
>ref|XP_006491562.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Citrus
sinensis]
Length = 602
Score = 81.3 bits (199), Expect = 1e-13
Identities = 43/81 (53%), Positives = 54/81 (66%)
Frame = -3
Query: 245 LDKHGKRNEKTPVEWLRNVVFPTGGDAMVAEHAAASEPSMAVDDGHKNENESGGHKRKLD 66
LDKHGK NEKTP EW RNVV P GGD++VA AAA+E ++A + +G KRKLD
Sbjct: 411 LDKHGKLNEKTPQEWARNVVLPPGGDSVVASLAAAAEQTVA------EKETAGVKKRKLD 464
Query: 65 ESGSPAPIPSKKLKVDEVEEI 3
SG + +KK KV+EV E+
Sbjct: 465 ASGDSPALNAKKAKVEEVVEV 485
>ref|XP_007028578.1| NAP57 isoform 2 [Theobroma cacao] gi|508717183|gb|EOY09080.1| NAP57
isoform 2 [Theobroma cacao]
Length = 583
Score = 81.3 bits (199), Expect = 1e-13
Identities = 46/99 (46%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Frame = -3
Query: 245 LDKHGKRNEKTPVEWLRNVVFPTGGDAMVAEHAAASEPSMAVDD---------------- 114
LDKHGK N+ TP EWLRNVV P GGD+MVA AA++EP++ D
Sbjct: 393 LDKHGKPNDSTPKEWLRNVVLPAGGDSMVASLAASAEPAVKDSDTAVVEKEITVVEKEKE 452
Query: 113 ---GHKNENESGGHKRKLD-ESGSPAPIPSKKLKVDEVE 9
K E + GHKRKLD S S P+ +KK KV+E E
Sbjct: 453 KKKKGKGEEDGEGHKRKLDGSSDSAVPVVAKKAKVEEAE 491
>ref|XP_007028577.1| NAP57 isoform 1 [Theobroma cacao] gi|508717182|gb|EOY09079.1| NAP57
isoform 1 [Theobroma cacao]
Length = 614
Score = 81.3 bits (199), Expect = 1e-13
Identities = 46/99 (46%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Frame = -3
Query: 245 LDKHGKRNEKTPVEWLRNVVFPTGGDAMVAEHAAASEPSMAVDD---------------- 114
LDKHGK N+ TP EWLRNVV P GGD+MVA AA++EP++ D
Sbjct: 393 LDKHGKPNDSTPKEWLRNVVLPAGGDSMVASLAASAEPAVKDSDTAVVEKEITVVEKEKE 452
Query: 113 ---GHKNENESGGHKRKLD-ESGSPAPIPSKKLKVDEVE 9
K E + GHKRKLD S S P+ +KK KV+E E
Sbjct: 453 KKKKGKGEEDGEGHKRKLDGSSDSAVPVVAKKAKVEEAE 491
>ref|XP_002457587.1| hypothetical protein SORBIDRAFT_03g009870 [Sorghum bicolor]
gi|241929562|gb|EES02707.1| hypothetical protein
SORBIDRAFT_03g009870 [Sorghum bicolor]
Length = 584
Score = 81.3 bits (199), Expect = 1e-13
Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Frame = -3
Query: 245 LDKHGKRNEKTPVEWLRNVVFPTGGDAMVAEHAAASEPSMA---VDDGHKNENESGGHKR 75
LDKHGK NEKTP EWLRNVV PTGGD +A AAA EP A D E + KR
Sbjct: 412 LDKHGKPNEKTPTEWLRNVVLPTGGDVSIASIAAAPEPEKAKVEQDTAVTEEVKEKKKKR 471
Query: 74 KLDESGSPAPIPSKKLKVDEVEE 6
+ D+ + +P+KK+KV+E E
Sbjct: 472 QKDDEDTDVSVPAKKIKVEEATE 494