BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00006859
         (215 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding pro...    61   1e-07
emb|CBI17177.3| unnamed protein product [Vitis vinifera]               61   1e-07
emb|CAN69818.1| hypothetical protein VITISV_037064 [Vitis vinifera]    61   1e-07
ref|XP_002534347.1| rubisco subunit binding-protein alpha subuni...    60   4e-07
ref|XP_007016822.1| RuBisCO large subunit-binding protein subuni...    59   7e-07
ref|XP_007016821.1| RuBisCO large subunit-binding protein subuni...    59   7e-07
ref|XP_006488046.1| PREDICTED: ruBisCO large subunit-binding pro...    56   6e-06
ref|XP_006424516.1| hypothetical protein CICLE_v10028085mg [Citr...    56   6e-06
ref|XP_006384931.1| RUBISCO SUBUNIT BINDING-protein ALPHA SUBUNI...    56   6e-06

>ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
           chloroplastic-like [Vitis vinifera]
          Length = 586

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 34/51 (66%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
 Frame = +1

Query: 67  MASANAVSTASIFGTPKQGSLRRRVS--QGQKLHYRSSGRRFSVRASAKKI 213
           MASANA+STASI  +PKQ S RRRV+  QG K +YR S  RF VRASAK+I
Sbjct: 1   MASANAISTASIIRSPKQESFRRRVNQQQGPKFNYRPSNNRFVVRASAKEI 51


>emb|CBI17177.3| unnamed protein product [Vitis vinifera]
          Length = 553

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 34/51 (66%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
 Frame = +1

Query: 67  MASANAVSTASIFGTPKQGSLRRRVS--QGQKLHYRSSGRRFSVRASAKKI 213
           MASANA+STASI  +PKQ S RRRV+  QG K +YR S  RF VRASAK+I
Sbjct: 1   MASANAISTASIIRSPKQESFRRRVNQQQGPKFNYRPSNNRFVVRASAKEI 51


>emb|CAN69818.1| hypothetical protein VITISV_037064 [Vitis vinifera]
          Length = 576

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 34/51 (66%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
 Frame = +1

Query: 67  MASANAVSTASIFGTPKQGSLRRRVS--QGQKLHYRSSGRRFSVRASAKKI 213
           MASANA+STASI  +PKQ S RRRV+  QG K +YR S  RF VRASAK+I
Sbjct: 1   MASANAISTASIIRSPKQESFRRRVNQQQGPKFNYRPSNNRFVVRASAKEI 51


>ref|XP_002534347.1| rubisco subunit binding-protein alpha subunit, ruba, putative
           [Ricinus communis] gi|223525447|gb|EEF28034.1| rubisco
           subunit binding-protein alpha subunit, ruba, putative
           [Ricinus communis]
          Length = 501

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/51 (60%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
 Frame = +1

Query: 67  MASANAVSTASIFGTPKQGSLRRRVS--QGQKLHYRSSGRRFSVRASAKKI 213
           MA++NA+STASI  +PKQG+LRRR +  Q Q+L+Y  S RRF+VRA+AK I
Sbjct: 1   MATSNAISTASILCSPKQGNLRRRTNQQQNQRLNYGQSSRRFTVRANAKDI 51


>ref|XP_007016822.1| RuBisCO large subunit-binding protein subunit alpha isoform 2
           [Theobroma cacao] gi|508787185|gb|EOY34441.1| RuBisCO
           large subunit-binding protein subunit alpha isoform 2
           [Theobroma cacao]
          Length = 586

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/51 (62%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
 Frame = +1

Query: 67  MASANAVSTASIFGTPKQGSLRRR--VSQGQKLHYRSSGRRFSVRASAKKI 213
           MASANA+S+ASI  +PKQG LRRR    Q Q+L+YR    RF+VRASAK+I
Sbjct: 1   MASANALSSASILCSPKQGGLRRRGNQQQNQRLNYRQGNSRFAVRASAKEI 51


>ref|XP_007016821.1| RuBisCO large subunit-binding protein subunit alpha isoform 1
           [Theobroma cacao] gi|508787184|gb|EOY34440.1| RuBisCO
           large subunit-binding protein subunit alpha isoform 1
           [Theobroma cacao]
          Length = 602

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/51 (62%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
 Frame = +1

Query: 67  MASANAVSTASIFGTPKQGSLRRR--VSQGQKLHYRSSGRRFSVRASAKKI 213
           MASANA+S+ASI  +PKQG LRRR    Q Q+L+YR    RF+VRASAK+I
Sbjct: 1   MASANALSSASILCSPKQGGLRRRGNQQQNQRLNYRQGNSRFAVRASAKEI 51


>ref|XP_006488046.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
           chloroplastic-like [Citrus sinensis]
          Length = 582

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/51 (64%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
 Frame = +1

Query: 67  MASANAVSTASIFGTPKQGSLRRR--VSQGQKLHYRSSGRRFSVRASAKKI 213
           MASANA+S+ASI  +PKQGSLRRR   +QGQ+++Y    RRF+VRASAK I
Sbjct: 1   MASANALSSASILCSPKQGSLRRRGNQNQGQRVNY----RRFAVRASAKDI 47


>ref|XP_006424516.1| hypothetical protein CICLE_v10028085mg [Citrus clementina]
           gi|557526450|gb|ESR37756.1| hypothetical protein
           CICLE_v10028085mg [Citrus clementina]
          Length = 582

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/51 (64%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
 Frame = +1

Query: 67  MASANAVSTASIFGTPKQGSLRRR--VSQGQKLHYRSSGRRFSVRASAKKI 213
           MASANA+S+ASI  +PKQGSLRRR   +QGQ+++Y    RRF+VRASAK I
Sbjct: 1   MASANALSSASILCSPKQGSLRRRGNQNQGQRVNY----RRFAVRASAKDI 47


>ref|XP_006384931.1| RUBISCO SUBUNIT BINDING-protein ALPHA SUBUNIT [Populus trichocarpa]
           gi|550341699|gb|ERP62728.1| RUBISCO SUBUNIT
           BINDING-protein ALPHA SUBUNIT [Populus trichocarpa]
          Length = 587

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/51 (60%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
 Frame = +1

Query: 67  MASANAVSTASIFGTPKQGSLRRRVSQ--GQKLHYRSSGRRFSVRASAKKI 213
           MA++NA+STASI  +PKQG LRRR +Q    +L+Y  S RRFSVRA+AK I
Sbjct: 1   MATSNALSTASILCSPKQGGLRRRGNQQNNSRLNYGLSSRRFSVRANAKDI 51