BLASTX nr result

ID: Cocculus23_contig00005975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00005975
         (549 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311326.1| hypothetical protein POPTR_0008s09190g [Popu...    60   3e-07
gb|ABK92870.1| unknown [Populus trichocarpa]                           60   3e-07
ref|XP_002316104.1| hypothetical protein POPTR_0010s16990g [Popu...    58   1e-06

>ref|XP_002311326.1| hypothetical protein POPTR_0008s09190g [Populus trichocarpa]
           gi|222851146|gb|EEE88693.1| hypothetical protein
           POPTR_0008s09190g [Populus trichocarpa]
          Length = 366

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 42/89 (47%), Positives = 47/89 (52%)
 Frame = -2

Query: 269 LLLKHILTTSHQLYASPSRPLFLRASPISKPGVPSFHLRFLSANPSPCYDYGDDFHSANH 90
           LLL HI TT    + SP+ P  L  S      V  F  R  SA PS    Y ++  S +H
Sbjct: 11  LLLDHI-TTKASDFLSPNLPKPLNRSHPLIHTVRGFKFRPFSAIPSRVSVYSNEIESGSH 69

Query: 89  DFGQKYALDCKEDEEDTGKIPVKAYFLST 3
           D    Y L  KEDEE TGKIPVKAYFL T
Sbjct: 70  DLALNYPLGPKEDEE-TGKIPVKAYFLCT 97


>gb|ABK92870.1| unknown [Populus trichocarpa]
          Length = 104

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 41/89 (46%), Positives = 47/89 (52%)
 Frame = -2

Query: 269 LLLKHILTTSHQLYASPSRPLFLRASPISKPGVPSFHLRFLSANPSPCYDYGDDFHSANH 90
           LLL HI T +   + SP+ P  L  S      V  F  R  SA PS    Y ++  S +H
Sbjct: 11  LLLDHITTKASDFF-SPNLPKPLNRSHPLIHTVRGFKFRPFSAIPSRVSVYSNEIESGSH 69

Query: 89  DFGQKYALDCKEDEEDTGKIPVKAYFLST 3
           D    Y L  KEDEE TGKIPVKAYFL T
Sbjct: 70  DLALNYPLGPKEDEE-TGKIPVKAYFLCT 97


>ref|XP_002316104.1| hypothetical protein POPTR_0010s16990g [Populus trichocarpa]
           gi|222865144|gb|EEF02275.1| hypothetical protein
           POPTR_0010s16990g [Populus trichocarpa]
          Length = 366

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 39/89 (43%), Positives = 48/89 (53%)
 Frame = -2

Query: 269 LLLKHILTTSHQLYASPSRPLFLRASPISKPGVPSFHLRFLSANPSPCYDYGDDFHSANH 90
           LLL HI T + + + SP+ P  +  S      V  F  R  SA PS    Y ++  S +H
Sbjct: 11  LLLNHITTKAFK-FLSPNLPRPIYHSHPLTQTVCGFKFRSFSAIPSRVSVYSNEIESGSH 69

Query: 89  DFGQKYALDCKEDEEDTGKIPVKAYFLST 3
           D    Y L  KEDEE +GKIPVKAYFL T
Sbjct: 70  DLAINYDLGPKEDEE-SGKIPVKAYFLCT 97


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