BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00005567
         (724 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB82610.1| RNA-binding protein 25 [Morus notabilis]                69   1e-09
ref|XP_004164394.1| PREDICTED: uncharacterized LOC101214372 [Cuc...    68   4e-09
ref|XP_002264457.1| PREDICTED: uncharacterized protein LOC100263...    65   2e-08
ref|XP_007044610.1| Splicing factor PWI domain-containing protei...    61   3e-07

>gb|EXB82610.1| RNA-binding protein 25 [Morus notabilis]
          Length = 1006

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 49/117 (41%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
 Frame = +3

Query: 6   IPPSAPSFRXXXXXXXXXXXXXXXXXXXXXNPSLQSSNFQNPNVQPPGVSIMLPGVASGA 185
           +PPSAPSFR                      P+ Q+ + Q P VQPPGVS      ASG 
Sbjct: 84  VPPSAPSFRPVPQFSPI--------------PNFQNPSLQIPGVQPPGVS---SAAASGG 126

Query: 186 AGSVTVS--MAPLRTGIYQMPPGQPPNPA--AAVASYGNGFAVAP--VPQGTIPPPG 338
           A  V +S  + P     YQ+ PGQ PNPA   + A   NGF   P  V QGTIPPPG
Sbjct: 127 AAGVPISVPVPPQPLMHYQVQPGQFPNPALRPSYAPIPNGFTAVPGAVTQGTIPPPG 183


>ref|XP_004164394.1| PREDICTED: uncharacterized LOC101214372 [Cucumis sativus]
          Length = 968

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 44/118 (37%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
 Frame = +3

Query: 3   AIPPSAPSFRXXXXXXXXXXXXXXXXXXXXXNPSLQSSNFQNPNVQPPGVSIM---LPGV 173
           A+PP+APSFR                        + + ++ NP VQPPGVS +    PG+
Sbjct: 80  AVPPTAPSFRPVPLSAHHFSPMP--------GTGMMNPSYSNPGVQPPGVSSVAAPAPGM 131

Query: 174 ASGAAGSVTVSMAPLRTGIYQMPPGQPPNPA-AAVASYGNGFAVAP--VPQGTIPPPG 338
            SG  G++ V + P     YQ+PPGQ PN      A+  NGFA  P   PQG  P PG
Sbjct: 132 VSGGTGAIPVPV-PQPMMAYQVPPGQVPNQVMRPYATMPNGFAAVPTATPQGAFPLPG 188


>ref|XP_002264457.1| PREDICTED: uncharacterized protein LOC100263874 [Vitis vinifera]
          Length = 958

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 42/85 (49%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
 Frame = +3

Query: 96  NPSLQSSNFQNPNVQPPGVSIMLPGVASGAAGSVTVSMAPLRTGIYQM-PPGQPPNPA-A 269
           N +LQ+SNFQNPNV PPGVS             V V M+      YQ+ PPGQPPNPA  
Sbjct: 106 NANLQNSNFQNPNVPPPGVS------------PVPVMMS------YQIPPPGQPPNPALR 147

Query: 270 AVASYGNGFAV--APVPQGTIPPPG 338
             A   NG+    AP PQG +PPPG
Sbjct: 148 PYAPVPNGYPAIPAPGPQGAVPPPG 172


>ref|XP_007044610.1| Splicing factor PWI domain-containing protein / RNA recognition
           motif-containing protein isoform 1 [Theobroma cacao]
           gi|508708545|gb|EOY00442.1| Splicing factor PWI
           domain-containing protein / RNA recognition
           motif-containing protein isoform 1 [Theobroma cacao]
          Length = 942

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 48/122 (39%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
 Frame = +3

Query: 3   AIPPSAPSFRXXXXXXXXXXXXXXXXXXXXXNPSLQSS---NFQNPNVQPPGVSIMLPGV 173
           A+PP+ PSFR                      P  Q S   NFQ P VQPPGV       
Sbjct: 83  AVPPAPPSFR----------------------PVPQFSPLPNFQAPGVQPPGV------- 113

Query: 174 ASGAAGSVTVSMAPLRTGIYQMPPGQPPNPA-AAVASYGNGFAVAP--VPQGTIPPPGCF 344
            S   GSV   +       YQ+P GQ PNPA    A   NG+A  P  VPQGT+PPPG  
Sbjct: 114 -SSVPGSVPPPLMQ-----YQVPSGQVPNPAIRPFAPIPNGYAAVPGAVPQGTMPPPGLL 167

Query: 345 YY 350
            Y
Sbjct: 168 RY 169