BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00005496
         (1055 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004429259.1| putative capsid protein [Fig cryptic virus] ...   114   9e-23
ref|XP_006837117.1| hypothetical protein AMTR_s00110p00120920, p...    86   2e-14
ref|XP_006837118.1| hypothetical protein AMTR_s00110p00120980, p...    77   2e-11
gb|AGI98171.1| coat protein, partial [Fig cryptic virus]               64   1e-07
gb|AGI98169.1| coat protein, partial [Fig cryptic virus]               61   7e-07

>ref|YP_004429259.1| putative capsid protein [Fig cryptic virus]
            gi|332163671|emb|CBW77437.1| putative capsid protein [Fig
            cryptic virus]
          Length = 337

 Score =  114 bits (284), Expect = 9e-23
 Identities = 89/315 (28%), Positives = 148/315 (46%), Gaps = 3/315 (0%)
 Frame = -2

Query: 1021 LDMDVLFTSLFINLKRVLKHYEPLRMQYGALGVDTVDVDAEIDRGIFHYCHQAMNELWNR 842
            +D D L+  +   +  +  +++ LR  Y      T  V   I   + H    A+ +L+NR
Sbjct: 34   VDFDALWNRINAIIVPIYTNWDQLRFHYPGT---TTTVTNNITLDVGHLVTFALWQLYNR 90

Query: 841  LQDVGWTYVHGTSDSVHFSIQNRATPLHEFELPQFYASMLSRIGPLHISDTLHETIVVY- 665
            L+ V   + H T  S    +  RA   +  E P F +SML  I  L I+D   + + ++ 
Sbjct: 91   LRSVAECFHHPTRTS---RMNTRAPISNRMEFPSFLSSMLESISWLRINDGPVDYLALFT 147

Query: 664  APDQTRPYFGRLEDPEIDVDQVTLFVQMLCSVDIPLGKIETWGSKGSYFTTCGRVTTHPQ 485
            AP  T   +GR      D          L ++ + L  I+   S GS++ T  +V T  +
Sbjct: 148  APTGTSNNYGRSTVQVPDNGCYDRLTGKLRALGVQLTPIDMTPSAGSFWPTT-QVITEEE 206

Query: 484  FFDIVGAFPLSNYSQDNIVMAMLFGDFGADDNPFEDLSISVGFVSDEATVQAFVATRDPS 305
             ++IVG F  S+Y  ++ + A+      A   PF D  ++VGFV+D   +    A   P+
Sbjct: 207  LYNIVGTFHSSHYVNEDAIRAIFLAGT-AHSQPFPDFGMTVGFVTDRTVMDPLAALAAPT 265

Query: 304  --LKGETASGLSRHVGGSYGINYFGLARASDARGVNSSRRGIYVLGRGFQRHYASLLACR 131
               + E A+   R V G Y +N+ G+  A+  +  +    G Y++GRG++R Y   LA R
Sbjct: 266  GTPRSEEATSAGRPVHGMYNVNHRGIQPAAGEQNPS----GCYIIGRGYERRYTCYLARR 321

Query: 130  ISNFEFIQILRNRML 86
            I+ FE  +I+R R +
Sbjct: 322  IAVFEANRIIRYRFM 336


>ref|XP_006837117.1| hypothetical protein AMTR_s00110p00120920, partial [Amborella
            trichopoda] gi|548839710|gb|ERM99970.1| hypothetical
            protein AMTR_s00110p00120920, partial [Amborella
            trichopoda]
          Length = 185

 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 50/133 (37%), Positives = 75/133 (56%)
 Frame = -2

Query: 1045 YPTVTVARLDMDVLFTSLFINLKRVLKHYEPLRMQYGALGVDTVDVDAEIDRGIFHYCHQ 866
            +P V V  +D   L+T L   L+  L  +EPLR     +   T ++   I  GI    +Q
Sbjct: 49   WPKVNVLGIDFVHLYTVLLFWLESFLTSHEPLRKFCDRI---TYEITTVIIDGIRSLLNQ 105

Query: 865  AMNELWNRLQDVGWTYVHGTSDSVHFSIQNRATPLHEFELPQFYASMLSRIGPLHISDTL 686
            ++ ELWN L+ +  T  H T +++      +A    EFE+P+FYA++L  IGPLHI D+L
Sbjct: 106  SLLELWNSLRSIAETNDHDTRNNI---FARKAPTFKEFEMPRFYANLLFGIGPLHIEDSL 162

Query: 685  HETIVVYAPDQTR 647
             +TI++YAP Q R
Sbjct: 163  MDTIIIYAPAQER 175


>ref|XP_006837118.1| hypothetical protein AMTR_s00110p00120980, partial [Amborella
           trichopoda] gi|548839711|gb|ERM99971.1| hypothetical
           protein AMTR_s00110p00120980, partial [Amborella
           trichopoda]
          Length = 105

 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 42/85 (49%), Positives = 54/85 (63%)
 Frame = -2

Query: 421 MLFGDFGADDNPFEDLSISVGFVSDEATVQAFVATRDPSLKGETASGLSRHVGGSYGINY 242
           MLFG FG+  +PFED  +++GFVSDE  + AF+    P  +G   +  +RHV G + IN 
Sbjct: 1   MLFGTFGSTKHPFEDPFLTIGFVSDETVIDAFLRIPSP-FEGILPTADARHVWGDFAINP 59

Query: 241 FGLARASDARGVNSSRRGIYVLGRG 167
           FGLA ASD   V    +GIYVLGRG
Sbjct: 60  FGLALASDT-PVEGRGKGIYVLGRG 83


>gb|AGI98171.1| coat protein, partial [Fig cryptic virus]
          Length = 115

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
 Frame = -2

Query: 481 FDIVGAFPLSNYSQDNIVMAMLFGDFGADDNPFEDLSISVGFVSDEATVQAFVATRDP-- 308
           F IVG F  S+Y  ++ + A+      A   PF D  ++VGFV+D   +    A   P  
Sbjct: 4   FQIVGTFHSSHYVNEDAIRAIFLAGT-AHSQPFPDFGMTVGFVTDRTVMDPLAALAAPTG 62

Query: 307 SLKGETASGLSRHVGGSYGINYFGLARASDARGVNSSRRGIYVLGRGFQRHYASLLA 137
           + + E A+   R V G Y +N+ G+  A+  +  +    G Y++GRG++R Y   LA
Sbjct: 63  TPRSEEATSAGRPVHGMYNVNHRGIQPAAGEQNPS----GCYIIGRGYERRYTCYLA 115


>gb|AGI98169.1| coat protein, partial [Fig cryptic virus]
          Length = 115

 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
 Frame = -2

Query: 475 IVGAFPLSNYSQDNIVMAMLFGDFGADDNPFEDLSISVGFVSDEATVQAFVATRDP--SL 302
           IVG F  S+Y  ++ + A+      A   PF D  ++VGFV+D   +    A   P  + 
Sbjct: 6   IVGTFHSSHYVNEDAIRAIFLAGT-AHSQPFPDFGMTVGFVTDRTVMDPLAALAAPTGTP 64

Query: 301 KGETASGLSRHVGGSYGINYFGLARASDARGVNSSRRGIYVLGRGFQRHYASLLA 137
           + E A+   R V G Y +N+ G+  A+  +  +    G Y++GRG++R Y   LA
Sbjct: 65  RSEEATSAGRPVHGMYNVNHRGIQPAAGEQNPS----GCYIIGRGYERRYTCYLA 115