BLASTX nr result

ID: Cocculus23_contig00005478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00005478
         (538 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530889.1| conserved hypothetical protein [Ricinus comm...    56   6e-06

>ref|XP_002530889.1| conserved hypothetical protein [Ricinus communis]
           gi|223529542|gb|EEF31495.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1876

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
 Frame = -3

Query: 374 NQNQAISSMQANNSKSPPQMPQYGFPIPYRPTYDLSSPRRI-ADADSDGA-QFQFAPVTP 201
           NQ    SS   +   S  QMPQYGFPIPY P YDL+SP  I ADA S     FQFAP+  
Sbjct: 175 NQAHCSSSNVPSGHNSLFQMPQYGFPIPYNPNYDLNSPPSIEADAASTVTNSFQFAPII- 233

Query: 200 DHAKQVQGNQHSEEAKLDETPNWRGN----NLQNKIAPAGNNIFRTNGEPPQFQPVINS 36
           + AK+++    ++ + L   P  +G+    + Q+    +  N+   +     FQ +++S
Sbjct: 234 EQAKKLE----NQLSALVNFPQGKGSSEERDKQDNYVVSLGNVPNQHNPDKLFQNIVDS 288


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