BLASTX nr result
ID: Cocculus23_contig00005424
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00005424
(609 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007016541.1| Tetratricopeptide repeat-like superfamily pr... 126 4e-27
ref|XP_002531104.1| DNA repair and recombination protein radB, p... 123 4e-26
ref|XP_004505899.1| PREDICTED: DNA repair protein RAD51 homolog ... 123 5e-26
ref|XP_004505898.1| PREDICTED: DNA repair protein RAD51 homolog ... 123 5e-26
ref|XP_006590287.1| PREDICTED: uncharacterized protein LOC100780... 122 1e-25
ref|XP_007132116.1| hypothetical protein PHAVU_011G067900g [Phas... 121 2e-25
ref|XP_006844260.1| hypothetical protein AMTR_s00145p00033710 [A... 120 3e-25
ref|XP_004148219.1| PREDICTED: DNA repair protein RAD51 homolog ... 120 3e-25
ref|XP_006590288.1| PREDICTED: uncharacterized protein LOC100780... 117 2e-24
ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog ... 117 2e-24
emb|CBI16200.3| unnamed protein product [Vitis vinifera] 117 2e-24
gb|EYU36249.1| hypothetical protein MIMGU_mgv1a010206mg [Mimulus... 115 1e-23
ref|NP_172254.2| DNA repair protein RAD51 homolog 4 [Arabidopsis... 113 5e-23
ref|NP_001077479.1| DNA repair protein RAD51 homolog 4 [Arabidop... 113 5e-23
ref|XP_004251314.1| PREDICTED: DNA repair protein RAD51 homolog ... 112 1e-22
gb|EXC35072.1| DNA repair protein RAD51-4-like protein [Morus no... 111 1e-22
ref|XP_006363374.1| PREDICTED: DNA repair protein RAD51 homolog ... 111 1e-22
ref|NP_001242445.1| uncharacterized protein LOC100780427 [Glycin... 110 2e-22
ref|XP_006305443.1| hypothetical protein CARUB_v10009852mg, part... 110 4e-22
ref|XP_004294616.1| PREDICTED: DNA repair protein RAD51 homolog ... 110 4e-22
>ref|XP_007016541.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508786904|gb|EOY34160.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 951
Score = 126 bits (317), Expect = 4e-27
Identities = 58/80 (72%), Positives = 70/80 (87%)
Frame = -1
Query: 609 GRSLMISAGFRLKKIAYEHNLSVLVTNHMVGGEGGTLKPALGESWKGVPHTRLLLSRDNR 430
GR+LM+SAG+ LKK+A +HNL+VLVTNH VGGEGGT KPALGESWK +PH+RLLLS D
Sbjct: 235 GRALMVSAGYLLKKLADQHNLAVLVTNHTVGGEGGTSKPALGESWKSIPHSRLLLSCDRG 294
Query: 429 SNKCNISVLKHPSMAHGQSA 370
SN CN+S+LKHPSMA G++A
Sbjct: 295 SNVCNVSILKHPSMASGEAA 314
>ref|XP_002531104.1| DNA repair and recombination protein radB, putative [Ricinus
communis] gi|223529300|gb|EEF31269.1| DNA repair and
recombination protein radB, putative [Ricinus communis]
Length = 315
Score = 123 bits (309), Expect = 4e-26
Identities = 55/86 (63%), Positives = 68/86 (79%)
Frame = -1
Query: 609 GRSLMISAGFRLKKIAYEHNLSVLVTNHMVGGEGGTLKPALGESWKGVPHTRLLLSRDNR 430
G +LM SAG LKK+A+EHN++VLVTNHMV GEGG KPALGESWK +PH RLLLSRD
Sbjct: 230 GHALMTSAGILLKKLAHEHNIAVLVTNHMVAGEGGNFKPALGESWKSIPHVRLLLSRDQG 289
Query: 429 SNKCNISVLKHPSMAHGQSADFLIHE 352
N CN+++LKHPS A G++A F + +
Sbjct: 290 KNVCNVTILKHPSQASGKAARFTVDD 315
>ref|XP_004505899.1| PREDICTED: DNA repair protein RAD51 homolog 4-like isoform X2
[Cicer arietinum]
Length = 318
Score = 123 bits (308), Expect = 5e-26
Identities = 57/80 (71%), Positives = 68/80 (85%)
Frame = -1
Query: 609 GRSLMISAGFRLKKIAYEHNLSVLVTNHMVGGEGGTLKPALGESWKGVPHTRLLLSRDNR 430
G +LMISAGF LKK+A+EHN++VLVTNH+VGGE G KPALGESWK VPH RLLLSRD
Sbjct: 232 GHALMISAGFLLKKLAHEHNIAVLVTNHVVGGEDGNSKPALGESWKSVPHVRLLLSRDCG 291
Query: 429 SNKCNISVLKHPSMAHGQSA 370
N CNIS++KHP+MA G++A
Sbjct: 292 GNVCNISIIKHPAMASGRTA 311
>ref|XP_004505898.1| PREDICTED: DNA repair protein RAD51 homolog 4-like isoform X1
[Cicer arietinum]
Length = 322
Score = 123 bits (308), Expect = 5e-26
Identities = 57/80 (71%), Positives = 68/80 (85%)
Frame = -1
Query: 609 GRSLMISAGFRLKKIAYEHNLSVLVTNHMVGGEGGTLKPALGESWKGVPHTRLLLSRDNR 430
G +LMISAGF LKK+A+EHN++VLVTNH+VGGE G KPALGESWK VPH RLLLSRD
Sbjct: 236 GHALMISAGFLLKKLAHEHNIAVLVTNHVVGGEDGNSKPALGESWKSVPHVRLLLSRDCG 295
Query: 429 SNKCNISVLKHPSMAHGQSA 370
N CNIS++KHP+MA G++A
Sbjct: 296 GNVCNISIIKHPAMASGRTA 315
>ref|XP_006590287.1| PREDICTED: uncharacterized protein LOC100780427 isoform X1 [Glycine
max]
Length = 321
Score = 122 bits (305), Expect = 1e-25
Identities = 56/79 (70%), Positives = 68/79 (86%)
Frame = -1
Query: 609 GRSLMISAGFRLKKIAYEHNLSVLVTNHMVGGEGGTLKPALGESWKGVPHTRLLLSRDNR 430
G +LMISAGF LKK+A+EHN++VLVTNH+VGG+ G KPA+GESWK VPH R+LLSRD
Sbjct: 236 GHALMISAGFLLKKLAHEHNIAVLVTNHVVGGDDGISKPAMGESWKSVPHVRILLSRDCG 295
Query: 429 SNKCNISVLKHPSMAHGQS 373
SN CNIS+LKHPSMA G++
Sbjct: 296 SNVCNISILKHPSMASGRA 314
>ref|XP_007132116.1| hypothetical protein PHAVU_011G067900g [Phaseolus vulgaris]
gi|561005116|gb|ESW04110.1| hypothetical protein
PHAVU_011G067900g [Phaseolus vulgaris]
Length = 318
Score = 121 bits (303), Expect = 2e-25
Identities = 57/80 (71%), Positives = 67/80 (83%)
Frame = -1
Query: 609 GRSLMISAGFRLKKIAYEHNLSVLVTNHMVGGEGGTLKPALGESWKGVPHTRLLLSRDNR 430
G +LMISAGF LKK+ +EHN++VLVTNH+VGGE G KPALGESWK VPH RLL S+D
Sbjct: 233 GHALMISAGFLLKKLGHEHNIAVLVTNHVVGGEDGVSKPALGESWKSVPHVRLLFSQDCG 292
Query: 429 SNKCNISVLKHPSMAHGQSA 370
SN CNIS+LKHPSMA G++A
Sbjct: 293 SNVCNISMLKHPSMASGRAA 312
>ref|XP_006844260.1| hypothetical protein AMTR_s00145p00033710 [Amborella trichopoda]
gi|548846669|gb|ERN05935.1| hypothetical protein
AMTR_s00145p00033710 [Amborella trichopoda]
Length = 324
Score = 120 bits (301), Expect = 3e-25
Identities = 58/82 (70%), Positives = 67/82 (81%)
Frame = -1
Query: 609 GRSLMISAGFRLKKIAYEHNLSVLVTNHMVGGEGGTLKPALGESWKGVPHTRLLLSRDNR 430
G SLM++ GF LKK+A ++NL+VLVTNH V GEGG KPALGESWK VPHTRLLLSRD
Sbjct: 239 GHSLMLNVGFILKKLAIDYNLAVLVTNHTVVGEGGNSKPALGESWKSVPHTRLLLSRDQM 298
Query: 429 SNKCNISVLKHPSMAHGQSADF 364
SN CN+S+LKH SMA GQ+A F
Sbjct: 299 SNICNMSILKHTSMACGQTASF 320
>ref|XP_004148219.1| PREDICTED: DNA repair protein RAD51 homolog 4-like [Cucumis
sativus] gi|449518921|ref|XP_004166484.1| PREDICTED: DNA
repair protein RAD51 homolog 4-like [Cucumis sativus]
Length = 314
Score = 120 bits (301), Expect = 3e-25
Identities = 59/86 (68%), Positives = 68/86 (79%)
Frame = -1
Query: 609 GRSLMISAGFRLKKIAYEHNLSVLVTNHMVGGEGGTLKPALGESWKGVPHTRLLLSRDNR 430
G +LMISAG LKKIA+EHN++VLVTNH VGG+ GT KPALGESWK VPH RL LSRD
Sbjct: 229 GHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAG 288
Query: 429 SNKCNISVLKHPSMAHGQSADFLIHE 352
SN C S+LKH SMA G +A F+I+E
Sbjct: 289 SNVCQASILKHSSMASGMTARFVIYE 314
>ref|XP_006590288.1| PREDICTED: uncharacterized protein LOC100780427 isoform X2 [Glycine
max]
Length = 319
Score = 117 bits (294), Expect = 2e-24
Identities = 54/74 (72%), Positives = 64/74 (86%)
Frame = -1
Query: 609 GRSLMISAGFRLKKIAYEHNLSVLVTNHMVGGEGGTLKPALGESWKGVPHTRLLLSRDNR 430
G +LMISAGF LKK+A+EHN++VLVTNH+VGG+ G KPA+GESWK VPH R+LLSRD
Sbjct: 230 GHALMISAGFLLKKLAHEHNIAVLVTNHVVGGDDGISKPAMGESWKSVPHVRILLSRDCG 289
Query: 429 SNKCNISVLKHPSM 388
SN CNIS+LKHPSM
Sbjct: 290 SNVCNISILKHPSM 303
>ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog 4-like [Vitis vinifera]
Length = 326
Score = 117 bits (294), Expect = 2e-24
Identities = 55/74 (74%), Positives = 65/74 (87%)
Frame = -1
Query: 609 GRSLMISAGFRLKKIAYEHNLSVLVTNHMVGGEGGTLKPALGESWKGVPHTRLLLSRDNR 430
GR+LMISAGF LKK+A+EHNL+V+VTNHMVGGEGG LKPALGESWK +PH RLLLSRD
Sbjct: 229 GRALMISAGFLLKKLAHEHNLAVVVTNHMVGGEGGILKPALGESWKSIPHVRLLLSRDPG 288
Query: 429 SNKCNISVLKHPSM 388
S+ C++S+LKH M
Sbjct: 289 SSICHMSILKHSYM 302
>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
Length = 1093
Score = 117 bits (294), Expect = 2e-24
Identities = 55/74 (74%), Positives = 65/74 (87%)
Frame = -1
Query: 609 GRSLMISAGFRLKKIAYEHNLSVLVTNHMVGGEGGTLKPALGESWKGVPHTRLLLSRDNR 430
GR+LMISAGF LKK+A+EHNL+V+VTNHMVGGEGG LKPALGESWK +PH RLLLSRD
Sbjct: 288 GRALMISAGFLLKKLAHEHNLAVVVTNHMVGGEGGILKPALGESWKSIPHVRLLLSRDPG 347
Query: 429 SNKCNISVLKHPSM 388
S+ C++S+LKH M
Sbjct: 348 SSICHMSILKHSYM 361
>gb|EYU36249.1| hypothetical protein MIMGU_mgv1a010206mg [Mimulus guttatus]
Length = 319
Score = 115 bits (287), Expect = 1e-23
Identities = 51/84 (60%), Positives = 68/84 (80%)
Frame = -1
Query: 609 GRSLMISAGFRLKKIAYEHNLSVLVTNHMVGGEGGTLKPALGESWKGVPHTRLLLSRDNR 430
G +LM++AGF LK++A+EHN+SV+VTNHMVGGE G KPALGESWK +PH RLL+SR +
Sbjct: 230 GHALMVTAGFLLKELAHEHNISVVVTNHMVGGEAGVSKPALGESWKSIPHVRLLISRYSA 289
Query: 429 SNKCNISVLKHPSMAHGQSADFLI 358
+ IS+LKHP +A G++ADF +
Sbjct: 290 TKDSTISILKHPYLATGKTADFTV 313
>ref|NP_172254.2| DNA repair protein RAD51 homolog 4 [Arabidopsis thaliana]
gi|83305360|sp|Q9LQQ2.2|RA51D_ARATH RecName: Full=DNA
repair protein RAD51 homolog 4; Short=AtRAD51D
gi|57283103|emb|CAD70703.1| putative DNA recombination
protein [Arabidopsis thaliana]
gi|58430742|dbj|BAD89165.1| AtRAD51D [Arabidopsis
thaliana] gi|90969171|gb|ABE02570.1| RAD51D splice
variant a [Arabidopsis thaliana]
gi|90969179|gb|ABE02658.1| RAD51D splice variant a
[Arabidopsis thaliana] gi|332190052|gb|AEE28173.1| DNA
repair protein RAD51-like 4 [Arabidopsis thaliana]
Length = 322
Score = 113 bits (282), Expect = 5e-23
Identities = 51/90 (56%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
Frame = -1
Query: 609 GRSLMISAGFRLKKIAYEHNLSVLVTNHMVG--GEGGTLKPALGESWKGVPHTRLLLSRD 436
GR+LM++ G+ LKK+A+EH++++LVTNH VG GEGG KPALGE+WK +PH RL LSRD
Sbjct: 229 GRALMVAIGYLLKKLAHEHSIAILVTNHTVGAGGEGGKTKPALGETWKSIPHVRLSLSRD 288
Query: 435 NRSNKCNISVLKHPSMAHGQSADFLIHEEN 346
++++ C IS+LKH S+ GQ+A L +EN
Sbjct: 289 HKNSNCTISILKHTSLPSGQAAKTLTRKEN 318
>ref|NP_001077479.1| DNA repair protein RAD51 homolog 4 [Arabidopsis thaliana]
gi|332190053|gb|AEE28174.1| DNA repair protein
RAD51-like 4 [Arabidopsis thaliana]
Length = 304
Score = 113 bits (282), Expect = 5e-23
Identities = 51/90 (56%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
Frame = -1
Query: 609 GRSLMISAGFRLKKIAYEHNLSVLVTNHMVG--GEGGTLKPALGESWKGVPHTRLLLSRD 436
GR+LM++ G+ LKK+A+EH++++LVTNH VG GEGG KPALGE+WK +PH RL LSRD
Sbjct: 211 GRALMVAIGYLLKKLAHEHSIAILVTNHTVGAGGEGGKTKPALGETWKSIPHVRLSLSRD 270
Query: 435 NRSNKCNISVLKHPSMAHGQSADFLIHEEN 346
++++ C IS+LKH S+ GQ+A L +EN
Sbjct: 271 HKNSNCTISILKHTSLPSGQAAKTLTRKEN 300
>ref|XP_004251314.1| PREDICTED: DNA repair protein RAD51 homolog 4-like [Solanum
lycopersicum]
Length = 314
Score = 112 bits (279), Expect = 1e-22
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = -1
Query: 609 GRSLMISAGFRLKKIAYEHNLSVLVTNHMVGGEGGTLKPALGESWKGVPHTRLLLSRDNR 430
G +LM+S GF LK++A+EH++S+LVTNHMV GE GT KPALGESW+ +PH RLLLS+D
Sbjct: 230 GHALMVSVGFLLKRLAHEHDISILVTNHMVAGEKGTSKPALGESWRSIPHIRLLLSKDQI 289
Query: 429 SNKCNISVLKHPSMAHGQSADF 364
SN +ISVL+HP MA G +F
Sbjct: 290 SNISSISVLRHPHMATGDRVEF 311
>gb|EXC35072.1| DNA repair protein RAD51-4-like protein [Morus notabilis]
Length = 359
Score = 111 bits (278), Expect = 1e-22
Identities = 57/97 (58%), Positives = 71/97 (73%), Gaps = 5/97 (5%)
Frame = -1
Query: 609 GRSLMISAGFRLKKIAYEHNLSVLVTNHMVGGEGGTLKPALGESWKGVPHTRLLLSRDNR 430
G SLM+SAG LKK+A++HNL VLVTNH VGGEGG KPALGE WK +PH RL+LSRD
Sbjct: 227 GHSLMVSAGCLLKKLAHQHNLVVLVTNHTVGGEGGAPKPALGEYWKSIPHVRLMLSRDRG 286
Query: 429 SNKCNISVLKHPSMAH----GQSADFLIHE-ENI*TK 334
+N C+IS+LKH SM + G++ L E +NI T+
Sbjct: 287 NNTCSISILKHSSMVYLGSSGEAIPILSKETQNIMTR 323
>ref|XP_006363374.1| PREDICTED: DNA repair protein RAD51 homolog 4-like [Solanum
tuberosum]
Length = 314
Score = 111 bits (278), Expect = 1e-22
Identities = 51/82 (62%), Positives = 66/82 (80%)
Frame = -1
Query: 609 GRSLMISAGFRLKKIAYEHNLSVLVTNHMVGGEGGTLKPALGESWKGVPHTRLLLSRDNR 430
G +LM+SAGF LK++A+EH++S+LVTNHMV GE GT KPALGESW+ +PH LLLS+D+
Sbjct: 230 GHALMLSAGFLLKRLAHEHDISILVTNHMVAGERGTSKPALGESWRSIPHVSLLLSKDHI 289
Query: 429 SNKCNISVLKHPSMAHGQSADF 364
SN +ISVL+HP MA G +F
Sbjct: 290 SNISSISVLRHPHMATGDRVEF 311
>ref|NP_001242445.1| uncharacterized protein LOC100780427 [Glycine max]
gi|255635337|gb|ACU18022.1| unknown [Glycine max]
Length = 325
Score = 110 bits (276), Expect = 2e-22
Identities = 52/74 (70%), Positives = 62/74 (83%)
Frame = -1
Query: 609 GRSLMISAGFRLKKIAYEHNLSVLVTNHMVGGEGGTLKPALGESWKGVPHTRLLLSRDNR 430
G +LMISAGF LKK+A+EHN++VLVTNH+VGG+ G K A+GESWK VPH R+LLSRD
Sbjct: 236 GHALMISAGFLLKKLAHEHNIAVLVTNHVVGGDDGISKTAMGESWKSVPHVRILLSRDCG 295
Query: 429 SNKCNISVLKHPSM 388
SN CNIS+LK PSM
Sbjct: 296 SNVCNISILKPPSM 309
>ref|XP_006305443.1| hypothetical protein CARUB_v10009852mg, partial [Capsella rubella]
gi|482574154|gb|EOA38341.1| hypothetical protein
CARUB_v10009852mg, partial [Capsella rubella]
Length = 304
Score = 110 bits (274), Expect = 4e-22
Identities = 49/90 (54%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
Frame = -1
Query: 609 GRSLMISAGFRLKKIAYEHNLSVLVTNHMVG--GEGGTLKPALGESWKGVPHTRLLLSRD 436
GR+LM++ G+ LKK+A+EH++++LVTNH VG GEG KPALGE+WK +PH RL+LSRD
Sbjct: 211 GRALMVAVGYMLKKLAHEHSIAILVTNHTVGAGGEGVKTKPALGETWKSIPHVRLMLSRD 270
Query: 435 NRSNKCNISVLKHPSMAHGQSADFLIHEEN 346
++++ C IS+LKH SM GQ+ I ++N
Sbjct: 271 HKNSNCTISILKHTSMPSGQTVRTTIRKDN 300
>ref|XP_004294616.1| PREDICTED: DNA repair protein RAD51 homolog 4-like [Fragaria vesca
subsp. vesca]
Length = 316
Score = 110 bits (274), Expect = 4e-22
Identities = 53/84 (63%), Positives = 67/84 (79%)
Frame = -1
Query: 609 GRSLMISAGFRLKKIAYEHNLSVLVTNHMVGGEGGTLKPALGESWKGVPHTRLLLSRDNR 430
GR+LM SAG+ LKK+A+EHN++VLVTNH VGGE G KPALG++WK V H RLLLS D+
Sbjct: 233 GRALMTSAGYLLKKLAHEHNIAVLVTNHTVGGEKGIAKPALGQTWKSVAHVRLLLSADHG 292
Query: 429 SNKCNISVLKHPSMAHGQSADFLI 358
++ +ISVLKHPSMA G+ A F +
Sbjct: 293 NDTRSISVLKHPSMASGKVARFRV 316