BLASTX nr result
ID: Cocculus23_contig00005344
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00005344
(3003 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp... 853 0.0
ref|XP_007217083.1| hypothetical protein PRUPE_ppa000515mg [Prun... 839 0.0
emb|CBI34982.3| unnamed protein product [Vitis vinifera] 832 0.0
ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron sp... 818 0.0
ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron sp... 814 0.0
ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron sp... 810 0.0
ref|XP_007031356.1| CRM family member 2, putative isoform 2 [The... 810 0.0
ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citr... 808 0.0
ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron sp... 805 0.0
ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron sp... 794 0.0
ref|XP_007031355.1| CRM family member 2, putative isoform 1 [The... 789 0.0
ref|XP_004489339.1| PREDICTED: chloroplastic group IIA intron sp... 789 0.0
ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron sp... 788 0.0
ref|XP_004297960.1| PREDICTED: uncharacterized protein LOC101297... 786 0.0
ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron sp... 778 0.0
ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron sp... 777 0.0
ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|2... 776 0.0
ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron sp... 775 0.0
ref|XP_006296749.1| hypothetical protein CARUB_v10015149mg [Caps... 772 0.0
ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti... 770 0.0
>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Vitis vinifera]
Length = 1044
Score = 853 bits (2203), Expect = 0.0
Identities = 489/958 (51%), Positives = 602/958 (62%), Gaps = 7/958 (0%)
Frame = +1
Query: 1 IPKAELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRT 180
+P+ ELRRL+ +GI ++KL VGKAGITEGIVNGIHERWRR+EVVKIRCED+C+ NMKRT
Sbjct: 186 LPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRT 245
Query: 181 HDLLERKTGGLVVWRSGSIIVLYRGVNYKYPYFLADANITNXXXXXXXXXXXXXXCAVDS 360
HD+LERKTGGLV+WRSGS I+LYRG NYKYPYFL+D N+ N DS
Sbjct: 246 HDILERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPN-----------------DS 288
Query: 361 AKDSTVECVDGVNSASPSTVNGMAHSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGM 540
+ D++ S S +N H S P P ++ S+++GVG
Sbjct: 289 SHDAS----------SDSQMNNEEHDGKEVCSSGKGDVKSAGPMPANKIAPLSLIQGVGY 338
Query: 541 PNKVRFQLPGEVQLVEEADHLLNGLGPRFTDWWGXXXXXXXXXXXXXXXXGYRKPFRLLP 720
P +VRFQLPGE QL EEAD LL+GLGPRFTDWWG GYR+PFRLLP
Sbjct: 339 PTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLP 398
Query: 721 YGIRPKLTSDEMTTLKRLSRHLPYQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQ 900
YG++PKLT+DEMT L+RL R LP FALGRNR LQGLAASM+KLWEKCEIAKIAVKRGVQ
Sbjct: 399 YGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQ 458
Query: 901 NTNSKMMAEELKLLTGGTLIARAGEFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETT 1080
NTNS+MMAEELK LTGGTL++R EFIVFYRGKDFLPPAVS+A++ RRK + G+
Sbjct: 459 NTNSEMMAEELKNLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYGIH--RGKQK 516
Query: 1081 EQSSNLDKIPKFEPRNDEPPSVDQVLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVA 1260
L + + D+ +D ++ SK LRS +V N KL++A
Sbjct: 517 IDHHRLAINAEESELGTSEHASDKDCDGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMA 576
Query: 1261 LEKKAQAXXXXXXXXXXXKAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFDGT 1440
LEKK +A Q+PE+D+EGIT+EERYML++VGLRMKP+L +GRRG+FDGT
Sbjct: 577 LEKKERAEKLLAELEEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGT 636
Query: 1441 IENMHLHWKYRELVKIISTDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKN 1620
+ENMHLHWKYRELVKIIS R IED H AR LEAESGGIL+AVER KGYAII+YRGKN
Sbjct: 637 VENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKN 696
Query: 1621 YMRPVDLRPRTLLNKKQALKRSIEAQRSESLKLHILKLSKNIEHLKRQVVKDGLETKSVL 1800
Y RP LRP+TLLNK++ALKRS+EAQR ESLKLH+L+L++NI+ LK Q+V
Sbjct: 697 YKRPASLRPQTLLNKREALKRSLEAQRRESLKLHVLRLTRNIDELKHQLV---------- 746
Query: 1801 STDCERPDTESETYDGSTLGNYSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDS 1980
S ++ + D S L A + Y +D L+HS+ GM S
Sbjct: 747 SRIKDKETNSKQLVDKSRL------------------HLARERYGADVILIHSSDGMDSS 788
Query: 1981 SCKQGGIQPDKRIGAYSQSDKPA-ETEHEFSSESVPK---GSVLITYPVEGAQIGASICK 2148
DKRI S D E E SSESV K +VL EG + C
Sbjct: 789 RDSLQTSHNDKRIDFPSMCDSDTDEANPEPSSESVLKEIETNVLTDMNEEGE---CTTCS 845
Query: 2149 ENLELDKTIDCCSKSGQKSSPDSNLRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNK 2328
E+L C + ++ H +
Sbjct: 846 EDLVSQGETSCYA--------------------------------------IVNH---EE 864
Query: 2329 SIESSVKAGEDEFKSSDHR--DEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVL 2502
++ESSVK+ ++EFK R D N + P R+ LSNR+RLLLRKQAL+MKKRPV+
Sbjct: 865 TMESSVKSSKNEFKPPVQRPVDTRSN----EMPFRAAPLSNRERLLLRKQALRMKKRPVI 920
Query: 2503 AVGKSNLITGVAKTIKVHFEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNK 2682
AVG+SN++TGVAKTIK HF+KHPLAIV+VKGRAKGTS+QE++FKLE+ATG+VLVSQEP+K
Sbjct: 921 AVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAVLVSQEPSK 980
Query: 2683 VILYRGWGEAEEPSVTKKKKR-NVRSALTGTDDSTTEVVSPQLIKAIRLECGLDGSQE 2853
VILYRGWG EE + + R + R G + VSP+L AIRLECGL +Q+
Sbjct: 981 VILYRGWGAREENGRSYRMNRSDARKTSAGREGGPRPTVSPELRAAIRLECGLKSNQD 1038
>ref|XP_007217083.1| hypothetical protein PRUPE_ppa000515mg [Prunus persica]
gi|462413233|gb|EMJ18282.1| hypothetical protein
PRUPE_ppa000515mg [Prunus persica]
Length = 1117
Score = 839 bits (2167), Expect = 0.0
Identities = 495/1003 (49%), Positives = 628/1003 (62%), Gaps = 50/1003 (4%)
Frame = +1
Query: 7 KAELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHD 186
K ELRRL TVGIG ++KL +GKAGITEGIVNGIHE WRRSEVVKI CEDLCR NMKRTHD
Sbjct: 165 KGELRRLTTVGIGLRKKLKIGKAGITEGIVNGIHENWRRSEVVKIVCEDLCRMNMKRTHD 224
Query: 187 LLERKTGGLVVWRSGSIIVLYRGVNYKYPYFLADANITNXXXXXXXXXXXXXXCAVDSAK 366
+LERKTGGLVVWRSGS IVLYRGVNYKYPYFL D VD +
Sbjct: 225 MLERKTGGLVVWRSGSKIVLYRGVNYKYPYFLRDK--------------------VD--E 262
Query: 367 DSTVECVDGVNSASPSTVNGMAHSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPN 546
DST+ D ++A P AH + + ++ +S+ PS +V+GVG+ +
Sbjct: 263 DSTI---DTSHNALPD-----AHINDGINEISNEVNSAIIPSTTNERAQPMLVKGVGLQD 314
Query: 547 KVRFQLPGEVQLVEEADHLLNGLGPRFTDWWGXXXXXXXXXXXXXXXXGYRKPFRLLPYG 726
+VRFQLPGE QL EEADH+L GLGPRFTDWWG GYRKPFRLLPYG
Sbjct: 315 RVRFQLPGEAQLTEEADHMLEGLGPRFTDWWGYEPLPVDADLLPAIVPGYRKPFRLLPYG 374
Query: 727 IRPKLTSDEMTTLKRLSRHLPYQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNT 906
++PKLT DEMTT++RL R LP FALGRNRNLQGLA+S+VKLWEKCEIAKIAVKRGVQNT
Sbjct: 375 LKPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLASSIVKLWEKCEIAKIAVKRGVQNT 434
Query: 907 NSKMMAEELKLLTGGTLIARAGEFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETTEQ 1086
N+++MAEELK LTGGTL+AR EFIV YRGKDFLPPAVS+A++ERRK + E + E
Sbjct: 435 NTEIMAEELKRLTGGTLLARDREFIVLYRGKDFLPPAVSSAIEERRKYAIHAEK-QIAEH 493
Query: 1087 SSNLDKIPKFEPRNDEPPSVDQVLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVALE 1266
+++ + EPR + + + ++ + L S + KL+S +V+ + KL++ALE
Sbjct: 494 GTSVTTRQELEPRTEP----ENKHEWTNDHKMGLPSAKRKLKSAEVVVNRTSIKLSMALE 549
Query: 1267 KKAQAXXXXXXXXXXXKAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIE 1446
KKA+A Q+PE+D+EGITKEERYML++VGLRMKP+L MGRRGVFDGTIE
Sbjct: 550 KKAKAEKLLAELENAAIPQQPEIDKEGITKEERYMLRKVGLRMKPFLLMGRRGVFDGTIE 609
Query: 1447 NMHLHWKYRELVKIISTDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYM 1626
NMHLHWKYRELVKII ++ IE + A+ LEAESGGIL+AVER KGYAII+YRGKNY
Sbjct: 610 NMHLHWKYRELVKIICNEKSIEAVQQVAQTLEAESGGILVAVERVSKGYAIIVYRGKNYS 669
Query: 1627 RPVDLRPRTLLNKKQALKRSIEAQRSESLKLHILKLSKNIEHLKRQVVKD---------- 1776
RP LRP+TLLNK++A+KRSIEAQR ESLKLH+L+L++NI+ LK +VKD
Sbjct: 670 RPASLRPQTLLNKREAMKRSIEAQRRESLKLHVLRLNENIDELKLLLVKDKEADNLQSVG 729
Query: 1777 ------------------------GLETKSVLSTDCERPDTESETYDGSTLGNYSHQQTN 1884
G L+T + + S T+D +G + +N
Sbjct: 730 ESRNELARDKQEAHVTPVNLNDGMGAVVNGQLATQQDEVISFSSTWDEDEIGKFKPGSSN 789
Query: 1885 EGSTEYSNDQEAVDGYASDSTLLHSNPG--MSDSSCKQGGIQPDKRIGAYSQSDKPA--- 2049
E T ++ V+ S+ ++ + P + D++ + G D + + PA
Sbjct: 790 ESVTNEEDEIGKVEPGPSNESVTNETPANFLKDTNGEVG----DFVSTCFPEDVMPAGVI 845
Query: 2050 -ETEHEFSSESVPKGSVLITYPVEGAQIGASICKENL--ELDKTID----CCSKSGQKSS 2208
E H + K +T P++ +I L + DK I CC +
Sbjct: 846 SEIVHVLFFKGRGKQEAHVT-PMKLNDGMGTIVNGQLATQQDKVITFSSICCEDENGEVE 904
Query: 2209 PDSN----LRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNKSIESSVKAGEDEFKSS 2376
P S+ TH + F D E ++ S FP + + +SS + G E + S
Sbjct: 905 PISSSEPVTNETHANLFRDVNGEEGVSISTSFPEDAMAK-------DSSGRFGNSESEPS 957
Query: 2377 DHRDEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITGVAKTIKVH 2556
M + P++SV LSN +RLLLRKQALKMKKRPVLAVG++N+++GVAKTIK H
Sbjct: 958 V--PVMVRKDFNERPLKSVHLSNGERLLLRKQALKMKKRPVLAVGRNNIVSGVAKTIKAH 1015
Query: 2557 FEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEAEEPSVTKK 2736
FEKHPLAIV+VKGRAKGTS++E+V KLE+ATG VLVSQEP+KVILYRGWG A + +
Sbjct: 1016 FEKHPLAIVNVKGRAKGTSVREVVLKLEQATGGVLVSQEPSKVILYRGWGAAGD---NDR 1072
Query: 2737 KKRNVRSALTGTDDSTTEVVSPQLIKAIRLECGLDGSQENEVT 2865
K N R + ST VSP+L+ AIRLECG + + T
Sbjct: 1073 KASNTRKKV-----STQGAVSPELLAAIRLECGFKSPGKEDAT 1110
Score = 66.6 bits (161), Expect = 6e-08
Identities = 35/108 (32%), Positives = 59/108 (54%)
Frame = +1
Query: 1327 PEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRC 1506
P + + K E L VG+ ++ L +G+ G+ +G + +H +W+ E+VKI+ D C
Sbjct: 156 PTLAELSLGKGELRRLTTVGIGLRKKLKIGKAGITEGIVNGIHENWRRSEVVKIVCEDLC 215
Query: 1507 IEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPR 1650
+ RT LE ++GG+++ R G I++YRG NY P LR +
Sbjct: 216 RMNMKRTHDMLERKTGGLVV----WRSGSKIVLYRGVNYKYPYFLRDK 259
Score = 60.5 bits (145), Expect = 5e-06
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Frame = +1
Query: 1 IPKAELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRT 180
I K E LR VG+ K L++G+ G+ +G + +H W+ E+VKI C + +++
Sbjct: 577 ITKEERYMLRKVGLRMKPFLLMGRRGVFDGTIENMHLHWKYRELVKIICNEKSIEAVQQV 636
Query: 181 HDLLERKTGGLVV----WRSGSIIVLYRGVNYKYPYFLADANITN 303
LE ++GG++V G I++YRG NY P L + N
Sbjct: 637 AQTLEAESGGILVAVERVSKGYAIIVYRGKNYSRPASLRPQTLLN 681
>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
Length = 1028
Score = 832 bits (2149), Expect = 0.0
Identities = 476/938 (50%), Positives = 591/938 (63%), Gaps = 6/938 (0%)
Frame = +1
Query: 1 IPKAELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRT 180
+P+ ELRRL+ +GI ++KL VGKAGITEGIVNGIHERWRR+EVVKIRCED+C+ NMKRT
Sbjct: 186 LPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRT 245
Query: 181 HDLLERKTGGLVVWRSGSIIVLYRGVNYKYPYFLADANITNXXXXXXXXXXXXXXCAVDS 360
HD+LERKTGGLV+WRSGS I+LYRG NYKYPYFL+D N+ N DS
Sbjct: 246 HDILERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPN-----------------DS 288
Query: 361 AKDSTVECVDGVNSASPSTVNGMAHSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGM 540
+ D++ S S +N H S P P ++ S+++GVG
Sbjct: 289 SHDAS----------SDSQMNNEEHDGKEVCSSGKGDVKSAGPMPANKIAPLSLIQGVGY 338
Query: 541 PNKVRFQLPGEVQLVEEADHLLNGLGPRFTDWWGXXXXXXXXXXXXXXXXGYRKPFRLLP 720
P +VRFQLPGE QL EEAD LL+GLGPRFTDWWG GYR+PFRLLP
Sbjct: 339 PTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLP 398
Query: 721 YGIRPKLTSDEMTTLKRLSRHLPYQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQ 900
YG++PKLT+DEMT L+RL R LP FALGRNR LQGLAASM+KLWEKCEIAKIAVKRGVQ
Sbjct: 399 YGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQ 458
Query: 901 NTNSKMMAEELKLLTGGTLIARAGEFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETT 1080
NTNS+MMAEELK LTGGTL++R EFIVFYRGKDFLPPAVS+A++ RRK + G+
Sbjct: 459 NTNSEMMAEELKNLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYGIH--RGKQK 516
Query: 1081 EQSSNLDKIPKFEPRNDEPPSVDQVLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVA 1260
L + + D+ +D ++ SK LRS +V N KL++A
Sbjct: 517 IDHHRLAINAEESELGTSEHASDKDCDGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMA 576
Query: 1261 LEKKAQAXXXXXXXXXXXKAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFDGT 1440
LEKK +A Q+PE+D+EGIT+EERYML++VGLRMKP+L +GRRG+FDGT
Sbjct: 577 LEKKERAEKLLAELEEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGT 636
Query: 1441 IENMHLHWKYRELVKIISTDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKN 1620
+ENMHLHWKYRELVKIIS R IED H AR LEAESGGIL+AVER KGYAII+YRGKN
Sbjct: 637 VENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKN 696
Query: 1621 YMRPVDLRPRTLLNKKQALKRSIEAQRSESLKLHILKLSKNIEHLKRQVVKDGLETKSVL 1800
Y RP LRP+TLLNK++ALKRS+EAQR ESLKLH+L+L++NI+ LK Q+V
Sbjct: 697 YKRPASLRPQTLLNKREALKRSLEAQRRESLKLHVLRLTRNIDELKHQLV---------- 746
Query: 1801 STDCERPDTESETYDGSTLGNYSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDS 1980
S ++ + D S L A + Y +D L+HS+ GM S
Sbjct: 747 SRIKDKETNSKQLVDKSRL------------------HLARERYGADVILIHSSDGMDSS 788
Query: 1981 SCKQGGIQPDKRIGAYSQSDKPA-ETEHEFSSESVPK---GSVLITYPVEGAQIGASICK 2148
DKRI S D E E SSESV K +VL EG + C
Sbjct: 789 RDSLQTSHNDKRIDFPSMCDSDTDEANPEPSSESVLKEIETNVLTDMNEEGE---CTTCS 845
Query: 2149 ENLELDKTIDCCSKSGQKSSPDSNLRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNK 2328
E+L C + ++ H +
Sbjct: 846 EDLVSQGETSCYA--------------------------------------IVNH---EE 864
Query: 2329 SIESSVKAGEDEFKSSDHR--DEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVL 2502
++ESSVK+ ++EFK R D N + P R+ LSNR+RLLLRKQAL+MKKRPV+
Sbjct: 865 TMESSVKSSKNEFKPPVQRPVDTRSN----EMPFRAAPLSNRERLLLRKQALRMKKRPVI 920
Query: 2503 AVGKSNLITGVAKTIKVHFEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNK 2682
AVG+SN++TGVAKTIK HF+KHPLAIV+VKGRAKGTS+QE++FKLE+ATG+VLVSQEP+K
Sbjct: 921 AVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAVLVSQEPSK 980
Query: 2683 VILYRGWGEAEEPSVTKKKKRNVRSALTGTDDSTTEVV 2796
VILYRGWG EE + + R + ++++T++V
Sbjct: 981 VILYRGWGAREENGRSYRMNR-INIVFKSAEENSTQMV 1017
>ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568857850|ref|XP_006482477.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X2 [Citrus sinensis]
Length = 1076
Score = 818 bits (2113), Expect = 0.0
Identities = 474/958 (49%), Positives = 595/958 (62%), Gaps = 9/958 (0%)
Frame = +1
Query: 13 ELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLL 192
ELRRLRT+GIG ++KL +GKAGITEGIVNGIHERWR +EVVKI CEDLCR NMKRTHD L
Sbjct: 184 ELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSL 243
Query: 193 ERKTGGLVVWRSGSIIVLYRGVNYKYPYFLADANITNXXXXXXXXXXXXXXCAVDSAKDS 372
ERKTGGLVVWRSGS I+LYRG +YKYPYFLAD + T+ D D
Sbjct: 244 ERKTGGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVD----DEGLDE 299
Query: 373 TVECVDGVNSASPSTVNGMAHSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKV 552
T G +SA PS SP + +++ VG P+K+
Sbjct: 300 TKTHSSGADSAKPS-----------------------GQSPTNKKVQQTLIHSVGSPDKL 336
Query: 553 RFQLPGEVQLVEEADHLLNGLGPRFTDWWGXXXXXXXXXXXXXXXXGYRKPFRLLPYGIR 732
R+QLPGE +LVEEAD LL+GLGPRFTDWWG GYR+PFRLLPYG++
Sbjct: 337 RYQLPGEAELVEEADRLLDGLGPRFTDWWGYDPQPVDADLLSATVPGYRRPFRLLPYGVQ 396
Query: 733 PKLTSDEMTTLKRLSRHLPYQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNS 912
PKLT+DEMTTL+RL R LP FALGRNRNLQGLAA++VKLWEKCEIAKIAVKRG QNTNS
Sbjct: 397 PKLTNDEMTTLRRLGRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNS 456
Query: 913 KMMAEELKLLTGGTLIARAGEFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETTEQSS 1092
+MMA+ELK LTGGTL++R EFIVFYRGKDFLPPA S A++ERRK+ T N E
Sbjct: 457 EMMAQELKRLTGGTLLSRDREFIVFYRGKDFLPPAASCAIEERRKHEFSTSNDSKEEPEL 516
Query: 1093 NLDKIPKFEPRNDEPPSVDQVLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVALEKK 1272
+ DE + E+++ +S EV +R T N +L+ ALEKK
Sbjct: 517 GNRHDNSGDNTQDEFGCTNDQKSTMHSEQKERRSAEVAIRRT-------NIRLSRALEKK 569
Query: 1273 AQAXXXXXXXXXXXKAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENM 1452
A+A Q EVD+EGIT+EERYML++VGLRMK +L MGRRGVFDGT+ENM
Sbjct: 570 AEAEKLLAELEEETPEQY-EVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENM 628
Query: 1453 HLHWKYRELVKIISTDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1632
HLHWK+RELVKIIS R IE A + AR LE ESGGIL+AVER KGYAII+YRGKNY RP
Sbjct: 629 HLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERP 688
Query: 1633 VDLRPRTLLNKKQALKRSIEAQRSESLKLHILKLSKNIEHLKRQVVKDGLETKSVLSTDC 1812
LRP+TLL K++A+KRS+EAQR +SLKLH+L+L++NIE LK Q+VKD +
Sbjct: 689 ACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDES 748
Query: 1813 ERPDTESETYDGSTLGNYSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQ 1992
P + E +G+ + T + + +A +D T SN +
Sbjct: 749 ILPLVKEE------IGDMQPAECMRSDTSHEVNVQARGECGADLTSTESNDTGDATIDGP 802
Query: 1993 GGIQPDKRIGAYSQSD-KPAETEHEFSSESVPKGS---VLITYPVEGAQIGASICKEN-- 2154
IQ DK+ + + + E E + S +SV K S ++ + EG G S C +N
Sbjct: 803 PAIQQDKQTESLTHNGISINEIESKSSLKSVSKESQLNMIADFFAEGVASGTSSCPDNSM 862
Query: 2155 ---LELDKTIDCCSKSGQKSSPDSNLRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGN 2325
+E + +D S +S++ S+ ENE + S + G
Sbjct: 863 QEVMEYNTIVDAEQCSSDNEPRESSIE----SAKSRSSENEPIEQSFEL-------AKGR 911
Query: 2326 KSIESSVKAGEDEFKSSDHRDEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLA 2505
+ + + G +++ R++ LSNRDRLLLRKQAL+MKKRPVLA
Sbjct: 912 SGLSTPIGTGNVWNENNS---------------RAIQLSNRDRLLLRKQALRMKKRPVLA 956
Query: 2506 VGKSNLITGVAKTIKVHFEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKV 2685
VG+SN++TGVAK IK HFEK+PLAIV+VKGRAKGTS+QE+V KLE+ATG+VLVSQEP+KV
Sbjct: 957 VGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKV 1016
Query: 2686 ILYRGWGEAEEPSVTKKKKRNVRSALTGTDDSTTEVVSPQLIKAIRLECGLDGSQENE 2859
ILYRGWG +E S ++ + ++ D VS +L+ AI+LECGL G QE E
Sbjct: 1017 ILYRGWGAEDESSPRGRQNSRAKPSIV-RDVRPWPAVSRELLAAIKLECGLQGQQEQE 1073
Score = 63.5 bits (153), Expect = 5e-07
Identities = 30/95 (31%), Positives = 57/95 (60%)
Frame = +1
Query: 1348 ITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIEDAHRT 1527
++ +E L+ +G+ ++ L +G+ G+ +G + +H W++ E+VKI+ D C + RT
Sbjct: 180 LSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRT 239
Query: 1528 ARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1632
+LE ++GG+++ R G II+YRG +Y P
Sbjct: 240 HDSLERKTGGLVV----WRSGSKIILYRGADYKYP 270
>ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X3 [Citrus sinensis]
Length = 1062
Score = 814 bits (2102), Expect = 0.0
Identities = 473/953 (49%), Positives = 592/953 (62%), Gaps = 4/953 (0%)
Frame = +1
Query: 13 ELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLL 192
ELRRLRT+GIG ++KL +GKAGITEGIVNGIHERWR +EVVKI CEDLCR NMKRTHD L
Sbjct: 184 ELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSL 243
Query: 193 ERKTGGLVVWRSGSIIVLYRGVNYKYPYFLADANITNXXXXXXXXXXXXXXCAVDSAKDS 372
ERKTGGLVVWRSGS I+LYRG +YKYPYFLAD + T+ D D
Sbjct: 244 ERKTGGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVD----DEGLDE 299
Query: 373 TVECVDGVNSASPSTVNGMAHSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKV 552
T G +SA PS SP + +++ VG P+K+
Sbjct: 300 TKTHSSGADSAKPS-----------------------GQSPTNKKVQQTLIHSVGSPDKL 336
Query: 553 RFQLPGEVQLVEEADHLLNGLGPRFTDWWGXXXXXXXXXXXXXXXXGYRKPFRLLPYGIR 732
R+QLPGE +LVEEAD LL+GLGPRFTDWWG GYR+PFRLLPYG++
Sbjct: 337 RYQLPGEAELVEEADRLLDGLGPRFTDWWGYDPQPVDADLLSATVPGYRRPFRLLPYGVQ 396
Query: 733 PKLTSDEMTTLKRLSRHLPYQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNS 912
PKLT+DEMTTL+RL R LP FALGRNRNLQGLAA++VKLWEKCEIAKIAVKRG QNTNS
Sbjct: 397 PKLTNDEMTTLRRLGRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNS 456
Query: 913 KMMAEELKLLTGGTLIARAGEFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETTEQSS 1092
+MMA+ELK LTGGTL++R EFIVFYRGKDFLPPA S A++ERRK+ T N E
Sbjct: 457 EMMAQELKRLTGGTLLSRDREFIVFYRGKDFLPPAASCAIEERRKHEFSTSNDSKEEPEL 516
Query: 1093 NLDKIPKFEPRNDEPPSVDQVLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVALEKK 1272
+ DE + E+++ +S EV +R T N +L+ ALEKK
Sbjct: 517 GNRHDNSGDNTQDEFGCTNDQKSTMHSEQKERRSAEVAIRRT-------NIRLSRALEKK 569
Query: 1273 AQAXXXXXXXXXXXKAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENM 1452
A+A Q EVD+EGIT+EERYML++VGLRMK +L MGRRGVFDGT+ENM
Sbjct: 570 AEAEKLLAELEEETPEQY-EVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENM 628
Query: 1453 HLHWKYRELVKIISTDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1632
HLHWK+RELVKIIS R IE A + AR LE ESGGIL+AVER KGYAII+YRGKNY RP
Sbjct: 629 HLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERP 688
Query: 1633 VDLRPRTLLNKKQALKRSIEAQRSESLKLHILKLSKNIEHLKRQVVKDGLETKSVLSTDC 1812
LRP+TLL K++A+KRS+EAQR +SLKLH+L+L++NIE LK Q+VKD +
Sbjct: 689 ACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDES 748
Query: 1813 ERPDTESETYDGSTLGNYSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQ 1992
P + E +G+ + T + + +A +D T SN +
Sbjct: 749 ILPLVKEE------IGDMQPAECMRSDTSHEVNVQARGECGADLTSTESNDTGDATIDGP 802
Query: 1993 GGIQPDKRIGAYSQSD-KPAETEHEFSSESVPKGS---VLITYPVEGAQIGASICKENLE 2160
IQ DK+ + + + E E + S +SV K S ++ + EG G S C +N
Sbjct: 803 PAIQQDKQTESLTHNGISINEIESKSSLKSVSKESQLNMIADFFAEGVASGTSSCPDN-- 860
Query: 2161 LDKTIDCCSKSGQKSSPDSNLRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNKSIES 2340
CS + +S++ S+ ENE + S + G + +
Sbjct: 861 -----SMCSSDNEPR--ESSIE----SAKSRSSENEPIEQSFEL-------AKGRSGLST 902
Query: 2341 SVKAGEDEFKSSDHRDEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSN 2520
+ G +++ R++ LSNRDRLLLRKQAL+MKKRPVLAVG+SN
Sbjct: 903 PIGTGNVWNENNS---------------RAIQLSNRDRLLLRKQALRMKKRPVLAVGRSN 947
Query: 2521 LITGVAKTIKVHFEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRG 2700
++TGVAK IK HFEK+PLAIV+VKGRAKGTS+QE+V KLE+ATG+VLVSQEP+KVILYRG
Sbjct: 948 IVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRG 1007
Query: 2701 WGEAEEPSVTKKKKRNVRSALTGTDDSTTEVVSPQLIKAIRLECGLDGSQENE 2859
WG +E S ++ + ++ D VS +L+ AI+LECGL G QE E
Sbjct: 1008 WGAEDESSPRGRQNSRAKPSIV-RDVRPWPAVSRELLAAIKLECGLQGQQEQE 1059
Score = 63.5 bits (153), Expect = 5e-07
Identities = 30/95 (31%), Positives = 57/95 (60%)
Frame = +1
Query: 1348 ITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIEDAHRT 1527
++ +E L+ +G+ ++ L +G+ G+ +G + +H W++ E+VKI+ D C + RT
Sbjct: 180 LSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRT 239
Query: 1528 ARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1632
+LE ++GG+++ R G II+YRG +Y P
Sbjct: 240 HDSLERKTGGLVV----WRSGSKIILYRGADYKYP 270
>ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X4 [Citrus sinensis]
Length = 1050
Score = 810 bits (2093), Expect = 0.0
Identities = 468/954 (49%), Positives = 585/954 (61%), Gaps = 5/954 (0%)
Frame = +1
Query: 13 ELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLL 192
ELRRLRT+GIG ++KL +GKAGITEGIVNGIHERWR +EVVKI CEDLCR NMKRTHD L
Sbjct: 184 ELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSL 243
Query: 193 ERKTGGLVVWRSGSIIVLYRGVNYKYPYFLADANITNXXXXXXXXXXXXXXCAVDSAKDS 372
ERKTGGLVVWRSGS I+LYRG +YKYPYFLAD + T+ D D
Sbjct: 244 ERKTGGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVD----DEGLDE 299
Query: 373 TVECVDGVNSASPSTVNGMAHSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKV 552
T G +SA PS SP + +++ VG P+K+
Sbjct: 300 TKTHSSGADSAKPS-----------------------GQSPTNKKVQQTLIHSVGSPDKL 336
Query: 553 RFQLPGEVQLVEEADHLLNGLGPRFTDWWGXXXXXXXXXXXXXXXXGYRKPFRLLPYGIR 732
R+QLPGE +LVEEAD LL+GLGPRFTDWWG GYR+PFRLLPYG++
Sbjct: 337 RYQLPGEAELVEEADRLLDGLGPRFTDWWGYDPQPVDADLLSATVPGYRRPFRLLPYGVQ 396
Query: 733 PKLTSDEMTTLKRLSRHLPYQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNS 912
PKLT+DEMTTL+RL R LP FALGRNRNLQGLAA++VKLWEKCEIAKIAVKRG QNTNS
Sbjct: 397 PKLTNDEMTTLRRLGRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNS 456
Query: 913 KMMAEELKLLTGGTLIARAGEFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETTEQSS 1092
+MMA+ELK LTGGTL++R EFIVFYRGKDFLPPA S A++ERRK+ T N E
Sbjct: 457 EMMAQELKRLTGGTLLSRDREFIVFYRGKDFLPPAASCAIEERRKHEFSTSNDSKEEPEL 516
Query: 1093 NLDKIPKFEPRNDEPPSVDQVLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVALEKK 1272
+ DE + E+++ +S EV +R T N +L+ ALEKK
Sbjct: 517 GNRHDNSGDNTQDEFGCTNDQKSTMHSEQKERRSAEVAIRRT-------NIRLSRALEKK 569
Query: 1273 AQAXXXXXXXXXXXKAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENM 1452
A+A Q EVD+EGIT+EERYML++VGLRMK +L MGRRGVFDGT+ENM
Sbjct: 570 AEAEKLLAELEEETPEQY-EVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENM 628
Query: 1453 HLHWKYRELVKIISTDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1632
HLHWK+RELVKIIS R IE A + AR LE ESGGIL+AVER KGYAII+YRGKNY RP
Sbjct: 629 HLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERP 688
Query: 1633 VDLRPRTLLNKKQALKRSIEAQRSESLKLHILKLSKNIEHLKRQVVKDGLETKSVLSTDC 1812
LRP+TLL K++A+KRS+EAQR +SLKLH+L+L++NIE LK Q+VKD +
Sbjct: 689 ACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDES 748
Query: 1813 ERPDTESETYDGSTLGNYSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQ 1992
P + E +G+ + T + + +A +D T SN +
Sbjct: 749 ILPLVKEE------IGDMQPAECMRSDTSHEVNVQARGECGADLTSTESNDTGDATIDGP 802
Query: 1993 GGIQPDKRIGAYSQSDKPAETEHEFSSESVPKGSVLITYPVEGAQIGASICKEN-----L 2157
IQ DK+ + + +D + EG G S C +N +
Sbjct: 803 PAIQQDKQTESLTHND----------------------FFAEGVASGTSSCPDNSMQEVM 840
Query: 2158 ELDKTIDCCSKSGQKSSPDSNLRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNKSIE 2337
E + +D S +S++ S+ ENE + S + G +
Sbjct: 841 EYNTIVDAEQCSSDNEPRESSIE----SAKSRSSENEPIEQSFEL-------AKGRSGLS 889
Query: 2338 SSVKAGEDEFKSSDHRDEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKS 2517
+ + G +++ R++ LSNRDRLLLRKQAL+MKKRPVLAVG+S
Sbjct: 890 TPIGTGNVWNENNS---------------RAIQLSNRDRLLLRKQALRMKKRPVLAVGRS 934
Query: 2518 NLITGVAKTIKVHFEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYR 2697
N++TGVAK IK HFEK+PLAIV+VKGRAKGTS+QE+V KLE+ATG+VLVSQEP+KVILYR
Sbjct: 935 NIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYR 994
Query: 2698 GWGEAEEPSVTKKKKRNVRSALTGTDDSTTEVVSPQLIKAIRLECGLDGSQENE 2859
GWG +E S ++ + ++ D VS +L+ AI+LECGL G QE E
Sbjct: 995 GWGAEDESSPRGRQNSRAKPSIV-RDVRPWPAVSRELLAAIKLECGLQGQQEQE 1047
Score = 63.5 bits (153), Expect = 5e-07
Identities = 30/95 (31%), Positives = 57/95 (60%)
Frame = +1
Query: 1348 ITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIEDAHRT 1527
++ +E L+ +G+ ++ L +G+ G+ +G + +H W++ E+VKI+ D C + RT
Sbjct: 180 LSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRT 239
Query: 1528 ARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1632
+LE ++GG+++ R G II+YRG +Y P
Sbjct: 240 HDSLERKTGGLVV----WRSGSKIILYRGADYKYP 270
>ref|XP_007031356.1| CRM family member 2, putative isoform 2 [Theobroma cacao]
gi|508710385|gb|EOY02282.1| CRM family member 2, putative
isoform 2 [Theobroma cacao]
Length = 1045
Score = 810 bits (2091), Expect = 0.0
Identities = 476/972 (48%), Positives = 610/972 (62%), Gaps = 20/972 (2%)
Frame = +1
Query: 10 AELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDL 189
AELRRLRTVGIGEKRKL +GKAGITEGIVNGIHERWRRSEVVKI CED+C+ NMKRTH++
Sbjct: 169 AELRRLRTVGIGEKRKLKLGKAGITEGIVNGIHERWRRSEVVKIVCEDICKMNMKRTHEV 228
Query: 190 LERKTGGLVVWRSGSIIVLYRGVNYKYPYFLADANITNXXXXXXXXXXXXXXCAVDSAKD 369
LERKTGGLVVWRSGS I+LYRG NY+YPYFLAD T+
Sbjct: 229 LERKTGGLVVWRSGSKIILYRGANYRYPYFLADKIATD---------------------- 266
Query: 370 STVECVDGVNSASPSTVNGMAHSSAYPSLVNGMAHSSTS-PSPVTRMTHSSMVRGVGMPN 546
D ++ASP T S + + + T+ P+ +MT +V+GVG P+
Sbjct: 267 ------DTSSNASPDTNMDNVELHETESCSSEINSAKTAIPNATNKMTKPMIVQGVGSPS 320
Query: 547 KVRFQLPGEVQLVEEADHLLNGLGPRFTDWWGXXXXXXXXXXXXXXXXGYRKPFRLLPYG 726
+VRFQLPGE +LVEEA+HLL+GLGPRFTDWWG GYR+PFRLLPYG
Sbjct: 321 RVRFQLPGEAELVEEANHLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGYRRPFRLLPYG 380
Query: 727 IRPKLTSDEMTTLKRLSRHLPYQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNT 906
++P LT+DEMTTL+RL R LP F LGRNR LQGLAAS+VK WEKCEIAK+AVKRGVQNT
Sbjct: 381 VKPILTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAASIVKHWEKCEIAKVAVKRGVQNT 440
Query: 907 NSKMMAEELKLLTGGTLIARAGEFIVFYRGKDFLPPAVSTAMDERRKN--RLQTENGETT 1080
NS++MAEELK LTGGTL++R +FIV YRGKDFLP AVS+A++ERR++ ++ + E +
Sbjct: 441 NSELMAEELKWLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRRHVIHVEKQGAECS 500
Query: 1081 EQSSNLDKIPKFEPRNDEPPSVDQVL-QRSD--QERRKLKSKEVKLRSTSRIVSSINNKL 1251
+ ++ + ++ ++ QRS+ + + +KS E +R T + KL
Sbjct: 501 KSKKTAQEVIVEDTKSGSESKINSAKDQRSNFFGDPKNMKSAEAAIRKT-------DVKL 553
Query: 1252 AVALEKKAQAXXXXXXXXXXXKAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVF 1431
++ALEKKA+A Q+ E+D+EGIT+EERYML++VGLRMKP+L +GRRGVF
Sbjct: 554 SMALEKKAKAEKLLAELEQAEIPQQSEIDKEGITQEERYMLRKVGLRMKPFLLLGRRGVF 613
Query: 1432 DGTIENMHLHWKYRELVKIISTDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYR 1611
DGT+ENMHLHWKYRELVKIIS + +E H+ AR LEAESGGIL+AVER KGYAII+YR
Sbjct: 614 DGTVENMHLHWKYRELVKIISKETNVEAVHQLARMLEAESGGILVAVERVSKGYAIIVYR 673
Query: 1612 GKNYMRPVDLRPRTLLNKKQALKRSIEAQRSESLKLHILKLSKNIEHLKRQVVKD----- 1776
GKNY RP LRP+TLL K+QA+KRS+E QR +SLKLHIL L++N+ L+ Q+V D
Sbjct: 674 GKNYERPTSLRPQTLLTKRQAMKRSLEEQRRKSLKLHILNLTRNVNDLEHQLVVDKEANS 733
Query: 1777 --GLETKSVLSTDCERPDTESETYDGSTLGNYSHQQTNEGSTEYSNDQEAVDGYASDSTL 1950
+E S+ E +S Y GS + E E+ D S+ST
Sbjct: 734 MQTVEQSSLPLVQEELETLQSVEYTGSVI---------ECPASSGGHVESRDKDGSESTS 784
Query: 1951 LHSNPGMSDSSCKQGGIQPDKRIGAYSQSDKPAETEHEFSSESVPKGSVLITYPVEGAQI 2130
+ ++ ++ S +Q Q + + +TE EFS+ESV
Sbjct: 785 MKNDKMVATISIRQPSKQEFMEPSSIHDGFENHKTESEFSAESV---------------- 828
Query: 2131 GASICKENLELDKTIDCCSKSGQKSSPDSNLRVTHL------SSFPDEVENEALNDSLDF 2292
+ S + LR H +S+PD + E ++DS
Sbjct: 829 ----------------------NRKSHATELRALHTQVEMVDTSYPDNLMEE-IDDS--G 863
Query: 2293 PTNLLGHIPGNKSIESSVK-AGEDEFKSSDHRDEMQNGSGVKGPIRSVTLSNRDRLLLRK 2469
N + N +ES V+ A + S + + N K + LSN+DRLLLRK
Sbjct: 864 AINAEHGVSNNGPMESLVESASMLDVSISSAVENVSN----KMASTANFLSNKDRLLLRK 919
Query: 2470 QALKMKKRPVLAVGKSNLITGVAKTIKVHFEKHPLAIVDVKGRAKGTSIQELVFKLEKAT 2649
QALKMKKRPVLAVG+SN++TGVAK I+ HF+KHPLAIV+VKGRAKGTS+QE+V KL++AT
Sbjct: 920 QALKMKKRPVLAVGRSNIVTGVAKAIRAHFQKHPLAIVNVKGRAKGTSVQEVVLKLQEAT 979
Query: 2650 GSVLVSQEPNKVILYRGWGEAEEPSVTKKKKRNVRSALTGTDDSTTEVVSPQLIKAIRLE 2829
G+VLVSQEP+KVILYRGWG +E + + RN + +L VSP+LI AIRLE
Sbjct: 980 GAVLVSQEPSKVILYRGWGAGDE--LGRGDNRNAKDSLA----QNRPAVSPELIAAIRLE 1033
Query: 2830 CGLDGSQENEVT 2865
CGL QE E T
Sbjct: 1034 CGLQLQQEEEAT 1045
Score = 65.1 bits (157), Expect = 2e-07
Identities = 34/102 (33%), Positives = 55/102 (53%)
Frame = +1
Query: 1327 PEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRC 1506
P + ++ E L+ VG+ K L +G+ G+ +G + +H W+ E+VKI+ D C
Sbjct: 159 PSLAELKLSAAELRRLRTVGIGEKRKLKLGKAGITEGIVNGIHERWRRSEVVKIVCEDIC 218
Query: 1507 IEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1632
+ RT LE ++GG+++ R G II+YRG NY P
Sbjct: 219 KMNMKRTHEVLERKTGGLVV----WRSGSKIILYRGANYRYP 256
>ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citrus clementina]
gi|557533064|gb|ESR44247.1| hypothetical protein
CICLE_v10013715mg [Citrus clementina]
Length = 1062
Score = 808 bits (2087), Expect = 0.0
Identities = 483/966 (50%), Positives = 597/966 (61%), Gaps = 17/966 (1%)
Frame = +1
Query: 13 ELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLL 192
ELRRLRT+GIG ++KL +GKAGITEGIVNGIHERWR +EVVKI CEDLCR NMKRTHD L
Sbjct: 184 ELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSL 243
Query: 193 ERKTGGLVVWRSGSIIVLYRGVNYKYPYFLADANITNXXXXXXXXXXXXXXCAVDSAKDS 372
ERKTGGLVVWRSGS I+LYRG +YKYPYFLAD + T+ D D
Sbjct: 244 ERKTGGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVD----DEGLDE 299
Query: 373 TVECVDGVNSASPSTVNGMAHSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKV 552
T G +SA PS SP + +++ VG P+K+
Sbjct: 300 TKTHSSGADSAKPS-----------------------GQSPTNKKVQQTLIHSVGSPDKL 336
Query: 553 RFQLPGEVQLVEEADHLLNGLGPRFTDWWGXXXXXXXXXXXXXXXXGYRKPFRLLPYGIR 732
R+QLPGE +LVEEAD LL+GLGPRFTDWWG GYR+PFRLLPYG++
Sbjct: 337 RYQLPGEAELVEEADRLLDGLGPRFTDWWGYDPQPVDADLLPATVPGYRRPFRLLPYGVQ 396
Query: 733 PKLTSDEMTTLKRLSRHLPYQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNS 912
PKLT+DEMTTL+RL R LP FALGRNRNLQGLAA++VKLWEKCEIAKIAVKRG QNTNS
Sbjct: 397 PKLTNDEMTTLRRLGRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNS 456
Query: 913 KMMAEELKLLTGGTLIARAGEFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETTEQSS 1092
+MMA+ELK LTGGTL++R EFIVFYRGKDFLPPA S+A++ERRK+ T N E
Sbjct: 457 EMMAQELKRLTGGTLLSRDREFIVFYRGKDFLPPAASSAIEERRKHEFSTSNDSKEEPEL 516
Query: 1093 NLDKIPKFEPRNDEPPSVDQVLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVALEKK 1272
+ DE + E+++ +S EV +R TS +L+ ALEKK
Sbjct: 517 GNRHDNSGDNTQDEFGCTNDQTSTMHSEQKERRSAEVAIRRTSI-------RLSRALEKK 569
Query: 1273 AQAXXXXXXXXXXXKAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENM 1452
A+A + ++ EVD+EGIT+EERYML++VGLRMK +L MGRRGVFDGT+ENM
Sbjct: 570 AEAEKLLAELEEE-RPEQYEVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENM 628
Query: 1453 HLHWKYRELVKIISTDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1632
HLHWK+RELVKIIS R IE A + AR LE ESGGIL+AVER KGYAII+YRGKNY RP
Sbjct: 629 HLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERP 688
Query: 1633 VDLRPRTLLNKKQALKRSIEAQRSESLKLHILKLSKNIEHLKRQVVKDGLETKSVLSTDC 1812
LRP+TLL K++A+KRS+EAQR +SLKLH+L+L++NIE LK Q+VKD E S+
Sbjct: 689 ACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKD-KEANSL----- 742
Query: 1813 ERPDTESETYDGSTLGNYSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQ 1992
E D GS + + +N + +A +D T SN +
Sbjct: 743 ETIDESILPLVGSIIFLMIWKSSNIPEIVFGIFFKARGECGADLTSTESNDTGDATIDGP 802
Query: 1993 GGIQPDKRIGAYSQSD-KPAETEHEFSSESVPKGS---VLITYPVEGAQIGASICKENLE 2160
IQ DK+ + + + E E E S +SV K S ++ + EG G C +N
Sbjct: 803 PAIQQDKQTESLTHNGISFNEIESESSLKSVSKESQLNMIADFFAEGVASGTPSCPDN-- 860
Query: 2161 LDKTIDCCSKSGQKSSPDSNLRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNKSIES 2340
CS + P SIES
Sbjct: 861 -----SMCSSDNE---------------------------------------PRESSIES 876
Query: 2341 SVKAGEDEFKSSDHRDEMQNG-SGVKGPI-----------RSVTLSNRDRLLLRKQALKM 2484
+ K+ E + + E+ G SG+ PI R++ LSNRDRLLLRKQAL+M
Sbjct: 877 A-KSRSSENEPIEQCFELAKGRSGLSTPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRM 935
Query: 2485 KKRPVLAVGKSNLITGVAKTIKVHFEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLV 2664
KKRPVLAVG+SN++TGVAK IK HFEK+PLAIV+VKGRAKGTS+QE+V KLE+ATG+VLV
Sbjct: 936 KKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLV 995
Query: 2665 SQEPNKVILYRGWGEAEEPSVTKKKKRNVRSALTGTDD-STTEVVSPQLIKAIRLECGLD 2841
SQEP+KVILYRGWG +E S + ++N R+ L+ D VS +L+ AI+LECGL
Sbjct: 996 SQEPSKVILYRGWGAEDESS--PRGRQNSRAKLSIVRDVRPWPAVSRELLAAIKLECGLQ 1053
Query: 2842 GSQENE 2859
G QE E
Sbjct: 1054 GQQEQE 1059
Score = 63.5 bits (153), Expect = 5e-07
Identities = 30/95 (31%), Positives = 57/95 (60%)
Frame = +1
Query: 1348 ITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIEDAHRT 1527
++ +E L+ +G+ ++ L +G+ G+ +G + +H W++ E+VKI+ D C + RT
Sbjct: 180 LSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRT 239
Query: 1528 ARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1632
+LE ++GG+++ R G II+YRG +Y P
Sbjct: 240 HDSLERKTGGLVV----WRSGSKIILYRGADYKYP 270
>ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X5 [Citrus sinensis]
Length = 1045
Score = 805 bits (2078), Expect = 0.0
Identities = 466/949 (49%), Positives = 584/949 (61%)
Frame = +1
Query: 13 ELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLL 192
ELRRLRT+GIG ++KL +GKAGITEGIVNGIHERWR +EVVKI CEDLCR NMKRTHD L
Sbjct: 184 ELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSL 243
Query: 193 ERKTGGLVVWRSGSIIVLYRGVNYKYPYFLADANITNXXXXXXXXXXXXXXCAVDSAKDS 372
ERKTGGLVVWRSGS I+LYRG +YKYPYFLAD + T+ D D
Sbjct: 244 ERKTGGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVD----DEGLDE 299
Query: 373 TVECVDGVNSASPSTVNGMAHSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKV 552
T G +SA PS SP + +++ VG P+K+
Sbjct: 300 TKTHSSGADSAKPS-----------------------GQSPTNKKVQQTLIHSVGSPDKL 336
Query: 553 RFQLPGEVQLVEEADHLLNGLGPRFTDWWGXXXXXXXXXXXXXXXXGYRKPFRLLPYGIR 732
R+QLPGE +LVEEAD LL+GLGPRFTDWWG GYR+PFRLLPYG++
Sbjct: 337 RYQLPGEAELVEEADRLLDGLGPRFTDWWGYDPQPVDADLLSATVPGYRRPFRLLPYGVQ 396
Query: 733 PKLTSDEMTTLKRLSRHLPYQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNS 912
PKLT+DEMTTL+RL R LP FALGRNRNLQGLAA++VKLWEKCEIAKIAVKRG QNTNS
Sbjct: 397 PKLTNDEMTTLRRLGRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNS 456
Query: 913 KMMAEELKLLTGGTLIARAGEFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETTEQSS 1092
+MMA+ELK LTGGTL++R EFIVFYRGKDFLPPA S A++ERRK+ T N E
Sbjct: 457 EMMAQELKRLTGGTLLSRDREFIVFYRGKDFLPPAASCAIEERRKHEFSTSNDSKEEPEL 516
Query: 1093 NLDKIPKFEPRNDEPPSVDQVLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVALEKK 1272
+ DE + E+++ +S EV +R T N +L+ ALEKK
Sbjct: 517 GNRHDNSGDNTQDEFGCTNDQKSTMHSEQKERRSAEVAIRRT-------NIRLSRALEKK 569
Query: 1273 AQAXXXXXXXXXXXKAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENM 1452
A+A Q EVD+EGIT+EERYML++VGLRMK +L MGRRGVFDGT+ENM
Sbjct: 570 AEAEKLLAELEEETPEQY-EVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENM 628
Query: 1453 HLHWKYRELVKIISTDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1632
HLHWK+RELVKIIS R IE A + AR LE ESGGIL+AVER KGYAII+YRGKNY RP
Sbjct: 629 HLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERP 688
Query: 1633 VDLRPRTLLNKKQALKRSIEAQRSESLKLHILKLSKNIEHLKRQVVKDGLETKSVLSTDC 1812
LRP+TLL K++A+KRS+EAQR +SLKLH+L+L++NIE LK Q+VKD +
Sbjct: 689 ACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDES 748
Query: 1813 ERPDTESETYDGSTLGNYSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQ 1992
P + E +G+ + T + + +A +D T SN +
Sbjct: 749 ILPLVKEE------IGDMQPAECMRSDTSHEVNVQARGECGADLTSTESNDTGDATIDGP 802
Query: 1993 GGIQPDKRIGAYSQSDKPAETEHEFSSESVPKGSVLITYPVEGAQIGASICKENLELDKT 2172
IQ DK+ + + + + T S P S+ +E +E +
Sbjct: 803 PAIQQDKQTESLTHNGVASGT------SSCPDNSM----------------QEVMEYNTI 840
Query: 2173 IDCCSKSGQKSSPDSNLRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNKSIESSVKA 2352
+D S +S++ S+ ENE + S + G + + +
Sbjct: 841 VDAEQCSSDNEPRESSIE----SAKSRSSENEPIEQSFEL-------AKGRSGLSTPIGT 889
Query: 2353 GEDEFKSSDHRDEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITG 2532
G +++ R++ LSNRDRLLLRKQAL+MKKRPVLAVG+SN++TG
Sbjct: 890 GNVWNENNS---------------RAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTG 934
Query: 2533 VAKTIKVHFEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEA 2712
VAK IK HFEK+PLAIV+VKGRAKGTS+QE+V KLE+ATG+VLVSQEP+KVILYRGWG
Sbjct: 935 VAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAE 994
Query: 2713 EEPSVTKKKKRNVRSALTGTDDSTTEVVSPQLIKAIRLECGLDGSQENE 2859
+E S ++ + ++ D VS +L+ AI+LECGL G QE E
Sbjct: 995 DESSPRGRQNSRAKPSIV-RDVRPWPAVSRELLAAIKLECGLQGQQEQE 1042
Score = 63.5 bits (153), Expect = 5e-07
Identities = 30/95 (31%), Positives = 57/95 (60%)
Frame = +1
Query: 1348 ITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIEDAHRT 1527
++ +E L+ +G+ ++ L +G+ G+ +G + +H W++ E+VKI+ D C + RT
Sbjct: 180 LSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRT 239
Query: 1528 ARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1632
+LE ++GG+++ R G II+YRG +Y P
Sbjct: 240 HDSLERKTGGLVV----WRSGSKIILYRGADYKYP 270
>ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X6 [Citrus sinensis]
Length = 1031
Score = 794 bits (2051), Expect = 0.0
Identities = 462/949 (48%), Positives = 576/949 (60%)
Frame = +1
Query: 13 ELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLL 192
ELRRLRT+GIG ++KL +GKAGITEGIVNGIHERWR +EVVKI CEDLCR NMKRTHD L
Sbjct: 184 ELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSL 243
Query: 193 ERKTGGLVVWRSGSIIVLYRGVNYKYPYFLADANITNXXXXXXXXXXXXXXCAVDSAKDS 372
ERKTGGLVVWRSGS I+LYRG +YKYPYFLAD + T+ D D
Sbjct: 244 ERKTGGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVD----DEGLDE 299
Query: 373 TVECVDGVNSASPSTVNGMAHSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKV 552
T G +SA PS SP + +++ VG P+K+
Sbjct: 300 TKTHSSGADSAKPS-----------------------GQSPTNKKVQQTLIHSVGSPDKL 336
Query: 553 RFQLPGEVQLVEEADHLLNGLGPRFTDWWGXXXXXXXXXXXXXXXXGYRKPFRLLPYGIR 732
R+QLPGE +LVEEAD LL+GLGPRFTDWWG GYR+PFRLLPYG++
Sbjct: 337 RYQLPGEAELVEEADRLLDGLGPRFTDWWGYDPQPVDADLLSATVPGYRRPFRLLPYGVQ 396
Query: 733 PKLTSDEMTTLKRLSRHLPYQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNS 912
PKLT+DEMTTL+RL R LP FALGRNRNLQGLAA++VKLWEKCEIAKIAVKRG QNTNS
Sbjct: 397 PKLTNDEMTTLRRLGRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNS 456
Query: 913 KMMAEELKLLTGGTLIARAGEFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETTEQSS 1092
+MMA+ELK LTGGTL++R EFIVFYRGKDFLPPA S A++ERRK+ T N E
Sbjct: 457 EMMAQELKRLTGGTLLSRDREFIVFYRGKDFLPPAASCAIEERRKHEFSTSNDSKEEPEL 516
Query: 1093 NLDKIPKFEPRNDEPPSVDQVLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVALEKK 1272
+ DE + E+++ +S EV +R T N +L+ ALEKK
Sbjct: 517 GNRHDNSGDNTQDEFGCTNDQKSTMHSEQKERRSAEVAIRRT-------NIRLSRALEKK 569
Query: 1273 AQAXXXXXXXXXXXKAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENM 1452
A+A Q EVD+EGIT+EERYML++VGLRMK +L MGRRGVFDGT+ENM
Sbjct: 570 AEAEKLLAELEEETPEQY-EVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENM 628
Query: 1453 HLHWKYRELVKIISTDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1632
HLHWK+RELVKIIS R IE A + AR LE ESGGIL+AVER KGYAII+YRGKNY RP
Sbjct: 629 HLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERP 688
Query: 1633 VDLRPRTLLNKKQALKRSIEAQRSESLKLHILKLSKNIEHLKRQVVKDGLETKSVLSTDC 1812
LRP+TLL K++A+KRS+EAQR +SLKLH+L+L++NIE LK Q+VKD +
Sbjct: 689 ACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDES 748
Query: 1813 ERPDTESETYDGSTLGNYSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQ 1992
P + E +G+ + T + + +A +D T SN +
Sbjct: 749 ILPLVKEE------IGDMQPAECMRSDTSHEVNVQARGECGADLTSTESNDTGDATIDGP 802
Query: 1993 GGIQPDKRIGAYSQSDKPAETEHEFSSESVPKGSVLITYPVEGAQIGASICKENLELDKT 2172
IQ DK+ + + + G G S C +N
Sbjct: 803 PAIQQDKQTESLTHN---------------------------GVASGTSSCPDN------ 829
Query: 2173 IDCCSKSGQKSSPDSNLRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNKSIESSVKA 2352
CS + +S++ S+ ENE + S + G + + +
Sbjct: 830 -SMCSSDNEPR--ESSIE----SAKSRSSENEPIEQSFEL-------AKGRSGLSTPIGT 875
Query: 2353 GEDEFKSSDHRDEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITG 2532
G +++ ++ N RDRLLLRKQAL+MKKRPVLAVG+SN++TG
Sbjct: 876 GNVWNENNSRAIQLSN---------------RDRLLLRKQALRMKKRPVLAVGRSNIVTG 920
Query: 2533 VAKTIKVHFEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEA 2712
VAK IK HFEK+PLAIV+VKGRAKGTS+QE+V KLE+ATG+VLVSQEP+KVILYRGWG
Sbjct: 921 VAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAE 980
Query: 2713 EEPSVTKKKKRNVRSALTGTDDSTTEVVSPQLIKAIRLECGLDGSQENE 2859
+E S ++ + ++ D VS +L+ AI+LECGL G QE E
Sbjct: 981 DESSPRGRQNSRAKPSIV-RDVRPWPAVSRELLAAIKLECGLQGQQEQE 1028
Score = 63.5 bits (153), Expect = 5e-07
Identities = 30/95 (31%), Positives = 57/95 (60%)
Frame = +1
Query: 1348 ITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIEDAHRT 1527
++ +E L+ +G+ ++ L +G+ G+ +G + +H W++ E+VKI+ D C + RT
Sbjct: 180 LSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRT 239
Query: 1528 ARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1632
+LE ++GG+++ R G II+YRG +Y P
Sbjct: 240 HDSLERKTGGLVV----WRSGSKIILYRGADYKYP 270
>ref|XP_007031355.1| CRM family member 2, putative isoform 1 [Theobroma cacao]
gi|508710384|gb|EOY02281.1| CRM family member 2, putative
isoform 1 [Theobroma cacao]
Length = 1087
Score = 789 bits (2038), Expect = 0.0
Identities = 476/1014 (46%), Positives = 610/1014 (60%), Gaps = 62/1014 (6%)
Frame = +1
Query: 10 AELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDL 189
AELRRLRTVGIGEKRKL +GKAGITEGIVNGIHERWRRSEVVKI CED+C+ NMKRTH++
Sbjct: 169 AELRRLRTVGIGEKRKLKLGKAGITEGIVNGIHERWRRSEVVKIVCEDICKMNMKRTHEV 228
Query: 190 LE------------------------------------------RKTGGLVVWRSGSIIV 243
LE RKTGGLVVWRSGS I+
Sbjct: 229 LEVCSLIWLFSLLLELFFFIALSMIDEEMRLIKVGLWLKKKLQMRKTGGLVVWRSGSKII 288
Query: 244 LYRGVNYKYPYFLADANITNXXXXXXXXXXXXXXCAVDSAKDSTVECVDGVNSASPSTVN 423
LYRG NY+YPYFLAD T+ D ++ASP T
Sbjct: 289 LYRGANYRYPYFLADKIATD----------------------------DTSSNASPDTNM 320
Query: 424 GMAHSSAYPSLVNGMAHSSTS-PSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADH 600
S + + + T+ P+ +MT +V+GVG P++VRFQLPGE +LVEEA+H
Sbjct: 321 DNVELHETESCSSEINSAKTAIPNATNKMTKPMIVQGVGSPSRVRFQLPGEAELVEEANH 380
Query: 601 LLNGLGPRFTDWWGXXXXXXXXXXXXXXXXGYRKPFRLLPYGIRPKLTSDEMTTLKRLSR 780
LL+GLGPRFTDWWG GYR+PFRLLPYG++P LT+DEMTTL+RL R
Sbjct: 381 LLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGYRRPFRLLPYGVKPILTNDEMTTLRRLGR 440
Query: 781 HLPYQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLI 960
LP F LGRNR LQGLAAS+VK WEKCEIAK+AVKRGVQNTNS++MAEELK LTGGTL+
Sbjct: 441 PLPCHFVLGRNRKLQGLAASIVKHWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLL 500
Query: 961 ARAGEFIVFYRGKDFLPPAVSTAMDERRKN--RLQTENGETTEQSSNLDKIPKFEPRNDE 1134
+R +FIV YRGKDFLP AVS+A++ERR++ ++ + E ++ ++ + ++
Sbjct: 501 SRDKDFIVLYRGKDFLPSAVSSAIEERRRHVIHVEKQGAECSKSKKTAQEVIVEDTKSGS 560
Query: 1135 PPSVDQVL-QRSD--QERRKLKSKEVKLRSTSRIVSSINNKLAVALEKKAQAXXXXXXXX 1305
++ QRS+ + + +KS E +R T + KL++ALEKKA+A
Sbjct: 561 ESKINSAKDQRSNFFGDPKNMKSAEAAIRKT-------DVKLSMALEKKAKAEKLLAELE 613
Query: 1306 XXXKAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENMHLHWKYRELVK 1485
Q+ E+D+EGIT+EERYML++VGLRMKP+L +GRRGVFDGT+ENMHLHWKYRELVK
Sbjct: 614 QAEIPQQSEIDKEGITQEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVK 673
Query: 1486 IISTDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNK 1665
IIS + +E H+ AR LEAESGGIL+AVER KGYAII+YRGKNY RP LRP+TLL K
Sbjct: 674 IISKETNVEAVHQLARMLEAESGGILVAVERVSKGYAIIVYRGKNYERPTSLRPQTLLTK 733
Query: 1666 KQALKRSIEAQRSESLKLHILKLSKNIEHLKRQVVKD-------GLETKSVLSTDCERPD 1824
+QA+KRS+E QR +SLKLHIL L++N+ L+ Q+V D +E S+ E
Sbjct: 734 RQAMKRSLEEQRRKSLKLHILNLTRNVNDLEHQLVVDKEANSMQTVEQSSLPLVQEELET 793
Query: 1825 TESETYDGSTLGNYSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQGGIQ 2004
+S Y GS + E E+ D S+ST + ++ ++ S +Q Q
Sbjct: 794 LQSVEYTGSVI---------ECPASSGGHVESRDKDGSESTSMKNDKMVATISIRQPSKQ 844
Query: 2005 PDKRIGAYSQSDKPAETEHEFSSESVPKGSVLITYPVEGAQIGASICKENLELDKTIDCC 2184
+ + +TE EFS+ESV
Sbjct: 845 EFMEPSSIHDGFENHKTESEFSAESV---------------------------------- 870
Query: 2185 SKSGQKSSPDSNLRVTHL------SSFPDEVENEALNDSLDFPTNLLGHIPGNKSIESSV 2346
+ S + LR H +S+PD + E ++DS N + N +ES V
Sbjct: 871 ----NRKSHATELRALHTQVEMVDTSYPDNLMEE-IDDS--GAINAEHGVSNNGPMESLV 923
Query: 2347 K-AGEDEFKSSDHRDEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNL 2523
+ A + S + + N K + LSN+DRLLLRKQALKMKKRPVLAVG+SN+
Sbjct: 924 ESASMLDVSISSAVENVSN----KMASTANFLSNKDRLLLRKQALKMKKRPVLAVGRSNI 979
Query: 2524 ITGVAKTIKVHFEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGW 2703
+TGVAK I+ HF+KHPLAIV+VKGRAKGTS+QE+V KL++ATG+VLVSQEP+KVILYRGW
Sbjct: 980 VTGVAKAIRAHFQKHPLAIVNVKGRAKGTSVQEVVLKLQEATGAVLVSQEPSKVILYRGW 1039
Query: 2704 GEAEEPSVTKKKKRNVRSALTGTDDSTTEVVSPQLIKAIRLECGLDGSQENEVT 2865
G +E + + RN + +L VSP+LI AIRLECGL QE E T
Sbjct: 1040 GAGDE--LGRGDNRNAKDSLA----QNRPAVSPELIAAIRLECGLQLQQEEEAT 1087
>ref|XP_004489339.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X1 [Cicer arietinum]
Length = 1019
Score = 789 bits (2038), Expect = 0.0
Identities = 458/952 (48%), Positives = 603/952 (63%), Gaps = 10/952 (1%)
Frame = +1
Query: 13 ELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLL 192
E+ RL +G K+K+ VGKAGITEGIVNGIHERWRRSEVV+I CEDLCR NMKRTHD+L
Sbjct: 157 EIMRLTKLGFEMKQKIKVGKAGITEGIVNGIHERWRRSEVVRIVCEDLCRINMKRTHDIL 216
Query: 193 ERKTGGLVVWRSGSIIVLYRGVNYKYPYFLADANITNXXXXXXXXXXXXXXCAVDSAKDS 372
ERKTGGLVVWRSGS I+LYRG++YKYPYFL+D + D D
Sbjct: 217 ERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLR------------------DDKIDD 258
Query: 373 TVECVDGVNSASPSTVNGMAHSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKV 552
++ +DG + +Y S +N H+S S + R ++V+GVG PNKV
Sbjct: 259 ALQHMDGDDK-------NCDERESYSSEMNSTTHASHSSN--IRTVKPALVQGVGTPNKV 309
Query: 553 RFQLPGEVQLVEEADHLLNGLGPRFTDWWGXXXXXXXXXXXXXXXXGYRKPFRLLPYGIR 732
RFQLPGE +L+EE D LL GLGPRFTDWWG G+R+PFRLLPYG++
Sbjct: 310 RFQLPGEAELLEEVDSLLEGLGPRFTDWWGYDPVPVDADLLPAVIPGFRQPFRLLPYGVK 369
Query: 733 PKLTSDEMTTLKRLSRHLPYQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNS 912
LT DE+TTLKRL R LP FALGRNR LQGLAA+++KLWE+CEIAKIAVKRGVQNT++
Sbjct: 370 SNLTDDELTTLKRLGRPLPCHFALGRNRKLQGLAAAIIKLWERCEIAKIAVKRGVQNTSN 429
Query: 913 KMMAEELKLLTGGTLIARAGEFIVFYRGKDFLPPAVSTAMDERRK---NRLQTENGETTE 1083
K+MAEE+K LTGGTL++R + IV YRGKDFLP A S+A+ +RR N+++ EN
Sbjct: 430 KIMAEEIKHLTGGTLLSRDKDVIVIYRGKDFLPAAASSAIQQRRNVLINKVKAEN----- 484
Query: 1084 QSSNLDKIPKFEPRNDEPPSVDQVLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVAL 1263
SS++ P E ++ +++++ + K K + KL+ AL
Sbjct: 485 -SSSVTVSPHSEAKDMAFLKDTEIIEKRIMTKAKAAIKRTSI------------KLSQAL 531
Query: 1264 EKKAQAXXXXXXXXXXXKAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFDGTI 1443
EKKA+A Q+ E+D+EGIT+EERYML+R+GL+MKP+L +GRRGVFDGT+
Sbjct: 532 EKKAKAEKLLAILEKVESPQEQEIDKEGITEEERYMLRRIGLKMKPFLLLGRRGVFDGTV 591
Query: 1444 ENMHLHWKYRELVKIISTDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNY 1623
ENMHLHWKYRELVKII +E H+TA LEAESGGIL+AVER KG+AII+YRGKNY
Sbjct: 592 ENMHLHWKYRELVKIICNQGSLESVHQTALTLEAESGGILVAVERVSKGHAIIVYRGKNY 651
Query: 1624 MRPVDLRPRTLLNKKQALKRSIEAQRSESLKLHILKLSKNIEHLKRQVVKDGLETKSVLS 1803
RP LRPRTLLNKKQALKRSIEAQR E+LKLH+LKL KNI LK Q+VKD +K +
Sbjct: 652 SRPSCLRPRTLLNKKQALKRSIEAQRREALKLHVLKLDKNINELKLQMVKDEASSKQIAE 711
Query: 1804 TDCERPDTESETYDGS--TLGNYSHQQTNEGSTEYSNDQ--EAVDGYASDSTLLHSNPGM 1971
T R D + + GS ++ S ++ + + + +Q E +DG +S+S +
Sbjct: 712 T--LRSDLAIDKHGGSSNSINCNSPKEASVHNQQAIEEQHIELIDGVSSNS--------L 761
Query: 1972 SDSSCKQGGIQPDKRIGAYSQSDKPAETEHEFSSESVPKGSVLITYPVEGAQIG--ASIC 2145
+ +S K+ + D + E E + S + E A +G +I
Sbjct: 762 NCNSSKEASV------------DNQQQAIEEQHIELIDGASSNLISSPEEASVGNQRAIQ 809
Query: 2146 KENLELDKTIDCCSKSGQKSSPDSNLRVTHLSSFPDEVENEALNDSLDFPTNLLGH-IPG 2322
++ +EL T ++ P+S+ + H DE E++++ D+ GH +
Sbjct: 810 EQYIELIDT-----GGARQGEPESSAGLVHQERQLDE-ESDSVVDT--------GHCVSN 855
Query: 2323 NKSIESSVKAGEDEFKSSDHRDEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVL 2502
NK++E+SV + + + + S + N S ++ P RS+ LSNR+RLLLR+QAL MKKRP+L
Sbjct: 856 NKAMEASVASLKSDPEPS---APVINKSSIELPSRSLYLSNRERLLLRRQALNMKKRPLL 912
Query: 2503 AVGKSNLITGVAKTIKVHFEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNK 2682
A+GKSN +TG+AK IK HF KHP IV+VKGRAKGTS+ ELV KLE ATG+VLVSQEP+K
Sbjct: 913 AIGKSNTVTGLAKAIKDHFRKHPFVIVNVKGRAKGTSVHELVSKLEHATGAVLVSQEPSK 972
Query: 2683 VILYRGWGEAEEPSVTKKKKRNVRSALTGTDDSTTEVVSPQLIKAIRLECGL 2838
+ILYRGWG +P + + G D VSP+L++AIR+ECGL
Sbjct: 973 IILYRGWGAGTKPGT------YLNDSKLGKDGGAKPTVSPELLEAIRIECGL 1018
Score = 66.2 bits (160), Expect = 8e-08
Identities = 36/118 (30%), Positives = 62/118 (52%)
Frame = +1
Query: 1315 KAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIIS 1494
K + P + +T E L ++G MK + +G+ G+ +G + +H W+ E+V+I+
Sbjct: 142 KRRVPTLAELSLTDGEIMRLTKLGFEMKQKIKVGKAGITEGIVNGIHERWRRSEVVRIVC 201
Query: 1495 TDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKK 1668
D C + RT LE ++GG+++ R G II+YRG +Y P L + L + K
Sbjct: 202 EDLCRINMKRTHDILERKTGGLVV----WRSGSKIILYRGIDYKYPYFLSDKVLRDDK 255
>ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 1049
Score = 788 bits (2035), Expect = 0.0
Identities = 455/965 (47%), Positives = 607/965 (62%), Gaps = 11/965 (1%)
Frame = +1
Query: 1 IPKAELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRT 180
+P ELRRLRTVGI ++KL +GKAGITEGIVNGIHERWRR E+VKI CED+CR NMKRT
Sbjct: 173 LPAEELRRLRTVGIALRKKLKIGKAGITEGIVNGIHERWRRMELVKITCEDICRLNMKRT 232
Query: 181 HDLLERKTGGLVVWRSGSIIVLYRGVNYKYPYFLADANITNXXXXXXXXXXXXXXCAVDS 360
H+LLE+KTGGLV+WRSGS I+LYRG +YKYPYF ++ + N +S
Sbjct: 233 HELLEKKTGGLVIWRSGSNIILYRGADYKYPYF-SEISFEN-----------------NS 274
Query: 361 AKDSTVECVDGVNSASPSTVNGMAHSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGM 540
A+D+T + G + N P R + +++GVG
Sbjct: 275 AQDATPDLFMGTEE----------------HMTNSSGTDVVKPDASDRKSPPRVIQGVGS 318
Query: 541 PNKVRFQLPGEVQLVEEADHLLNGLGPRFTDWWGXXXXXXXXXXXXXXXXGYRKPFRLLP 720
P++VRF+LPGE + EEAD LL GLGPRFTDWWG GY++PFRLLP
Sbjct: 319 PDRVRFELPGEAEHTEEADKLLEGLGPRFTDWWGCEPLPIDADLLPAIVPGYKRPFRLLP 378
Query: 721 YGIRPKLTSDEMTTLKRLSRHLPYQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQ 900
YG++PKLT+DEMTTL+RL R LP F LGRNR LQGLAA++VKLWEKCEIAK+AVKRGVQ
Sbjct: 379 YGVKPKLTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAAAIVKLWEKCEIAKVAVKRGVQ 438
Query: 901 NTNSKMMAEELKLLTGGTLIARAGEFIVFYRGKDFLPPAVSTAMDERRKNRLQTE--NGE 1074
NTNS++MAEELK LTGGTL++R EFIVFYRGKDFLP AVS+A++ERRK + E NG
Sbjct: 439 NTNSELMAEELKWLTGGTLLSRDREFIVFYRGKDFLPSAVSSAIEERRKQVFEEEKRNGF 498
Query: 1075 TTEQSSNLDKIPKFEPRNDEPPSVDQVLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLA 1254
+ ++ ++ + + Q+ QE++KL S E ++ T+ +KL
Sbjct: 499 NSSVANAKERKQSTTGSVSDDGHARRNNQKGVQEKKKLTSMEAAIKRTA-------DKLT 551
Query: 1255 VALEKKAQAXXXXXXXXXXXKAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFD 1434
ALEKKA+A Q+ ++D+EGIT+EER+ML+++GLRMKP+L +GRRGVFD
Sbjct: 552 TALEKKAEAENLLLELEEDEVPQQSDMDKEGITEEERFMLRKIGLRMKPFLLLGRRGVFD 611
Query: 1435 GTIENMHLHWKYRELVKIISTDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRG 1614
GT+ENMHLHWKYRELVK+I+ + IE+ H+ AR LEAESGGIL+AVE KG+AII+YRG
Sbjct: 612 GTVENMHLHWKYRELVKVITGRKTIEEVHQIARMLEAESGGILVAVELVNKGHAIIVYRG 671
Query: 1615 KNYMRPVDLRPRTLLNKKQALKRSIEAQRSESLKLHILKLSKNIEHLKRQVVK--DGLET 1788
KNY RP LRP+TLL+K++A+KRSIEAQR +SLKLH+LKL++NIE L+ ++ K + +
Sbjct: 672 KNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIEALQSRLAKNEEMVHI 731
Query: 1789 KSVLSTDCERPDTESETYDGSTLGNYSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSNPG 1968
+S D + P T G T ++Q ++ TE S D +S L +
Sbjct: 732 QSPDIVDRQVPVTGISDAAGGT----NYQSSSASPTEDSGDAAEDTDPSSQKELSSDSSD 787
Query: 1969 MSDSSCKQGGIQP----DKRIGAYSQSDKPAETEHEFSSESVPKGSVLITYPVEGAQIGA 2136
+S ++ I P + ++ A + +P EH+ S S+ + + V+ G+
Sbjct: 788 TDHNSQQEFPIDPFFQYEGKVEAVGDTIQP---EHQ-SISSIKESKSMFNVNVDQKTFGS 843
Query: 2137 SICKENLELDKTIDCCSKSGQKSS-PDSNLRVTHLSSF--PDEVENEALNDSLDFPTNLL 2307
++ S+S KSS + + + SF P EV+++ +
Sbjct: 844 AV--------------SESVSKSSRGEVKIHFSETRSFNKPREVDDK----------KEV 879
Query: 2308 GHIPGNKSIESSVKAGEDEFKSSDHRDEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMK 2487
+P K + +S+ R E P R V LSNR+RLLLRKQALKMK
Sbjct: 880 SQLPSVKP--------QQALRSTRSRSEGM-------PTRKVQLSNRERLLLRKQALKMK 924
Query: 2488 KRPVLAVGKSNLITGVAKTIKVHFEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVS 2667
K+PVLAVG+SN++TGVAK IK HF+K+PLAIV+VKGRAKGTS++E+VFKLE+ATG+VLVS
Sbjct: 925 KQPVLAVGRSNIVTGVAKNIKEHFKKYPLAIVNVKGRAKGTSVREVVFKLEQATGAVLVS 984
Query: 2668 QEPNKVILYRGWGEAEEPSVTKKKKRNVRSALTGTDDSTTEVVSPQLIKAIRLECGLDGS 2847
QEP+KVILYRGWG E + + R++ + +SP+LI AIRLECGL +
Sbjct: 985 QEPSKVILYRGWGPGGERGAS--NGNDTRNSRNSREQKELMSISPELISAIRLECGLQSN 1042
Query: 2848 QENEV 2862
+ EV
Sbjct: 1043 HDMEV 1047
Score = 65.9 bits (159), Expect = 1e-07
Identities = 36/106 (33%), Positives = 57/106 (53%)
Frame = +1
Query: 1315 KAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIIS 1494
K + P + + EE L+ VG+ ++ L +G+ G+ +G + +H W+ ELVKI
Sbjct: 162 KERAPSLAELTLPAEELRRLRTVGIALRKKLKIGKAGITEGIVNGIHERWRRMELVKITC 221
Query: 1495 TDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1632
D C + RT LE ++GG++I R G II+YRG +Y P
Sbjct: 222 EDICRLNMKRTHELLEKKTGGLVI----WRSGSNIILYRGADYKYP 263
>ref|XP_004297960.1| PREDICTED: uncharacterized protein LOC101297928 [Fragaria vesca
subsp. vesca]
Length = 1169
Score = 786 bits (2031), Expect = 0.0
Identities = 493/1063 (46%), Positives = 621/1063 (58%), Gaps = 111/1063 (10%)
Frame = +1
Query: 10 AELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDL 189
AELRRLRTVGI K+K+ VGKAGITEGIVNGIHE WRRSEVVK+ CEDLCR NMKRTHDL
Sbjct: 167 AELRRLRTVGIELKKKVRVGKAGITEGIVNGIHENWRRSEVVKLVCEDLCRLNMKRTHDL 226
Query: 190 LERKTGGLVVWRSGSIIVLYRGVNYKYPYFLADANITNXXXXXXXXXXXXXXCAVDSAKD 369
LERKTGGLVVWRSG+ I+LYRGVNYKYPYFL DS D
Sbjct: 227 LERKTGGLVVWRSGAKIILYRGVNYKYPYFLKGKK------------------REDSTSD 268
Query: 370 STVECVDGVNSASPSTVNGMAHSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNK 549
+ + V VN+ N S T PSP T ++++GVG+ N+
Sbjct: 269 DSGDAV--VNAGGTDEAN-----------------SVTGPSPTDEKTQPALIQGVGLANR 309
Query: 550 VRFQLPGEVQLVEEADHLLNGLGPRFTDWWGXXXXXXXXXXXXXXXXGYRKPFRLLPYGI 729
RFQLPGE +L EEAD +L GLGPRF DWWG GYRKPFRLLPYG+
Sbjct: 310 FRFQLPGEAELAEEADRMLEGLGPRFNDWWGYEPLPVDGDLLPAVVPGYRKPFRLLPYGL 369
Query: 730 RPKLTSDEMTTLKRLSRHLPYQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTN 909
+PKLT DEMTT++RL+R LP FALGRNR LQGLA S+VKLWEKCEIAK+AVKRGVQNTN
Sbjct: 370 QPKLTDDEMTTIRRLARPLPTHFALGRNRKLQGLATSIVKLWEKCEIAKVAVKRGVQNTN 429
Query: 910 SKMMAEELKLLTGGTLIARAGEFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETTEQS 1089
++MAEELK LTGGTLIAR EFIV YRGKDFLPPAVS+A++ERRK + +N + +
Sbjct: 430 CELMAEELKRLTGGTLIARDKEFIVLYRGKDFLPPAVSSAIEERRKAVMYADN-RSRKLR 488
Query: 1090 SNLDKIPKFEPRNDEPPSVDQVLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVALEK 1269
+ E R + L+ D L S++ KL+ST S + KL++ALEK
Sbjct: 489 ISATTAQDHESRTE--------LETKDDLTGGLPSEKRKLKSTEAAASRASIKLSMALEK 540
Query: 1270 KAQAXXXXXXXXXXXKAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIEN 1449
+ +A Q+PE+D+EGIT+EERYML++VGL+MKP+L MGRRGVFDGTIEN
Sbjct: 541 REKAEKLLAELEKAESPQQPEIDKEGITEEERYMLRKVGLKMKPFLLMGRRGVFDGTIEN 600
Query: 1450 MHLHWKYRELVKIISTDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMR 1629
MHLHWKYRELVKII ++ IE AH+ A+ LE+ESGGIL+AVER KGYAII+YRGKNY+R
Sbjct: 601 MHLHWKYRELVKIICNEKSIESAHQVAQTLESESGGILVAVERVSKGYAIIVYRGKNYIR 660
Query: 1630 PVDLRPRTLLNKKQALKRSIEAQRSESLKL-------------------------HILKL 1734
P +LRP+TLL K++ALKRSIEAQR ESLKL H +
Sbjct: 661 PANLRPQTLLTKREALKRSIEAQRRESLKLHVLKLNKNIDELEELVVKGKDSNNMHPVNE 720
Query: 1735 SKNI----------------EHLKRQ------------------VVKDGLETKSV----L 1800
SK + E+LK + VVK L T+ L
Sbjct: 721 SKELVREEVNNVESEECMHEENLKARGKQESHVTNMNLNDGMVAVVKGHLATQQGEGYGL 780
Query: 1801 STDCERPDT---ESETYDGSTL-----GNYSHQQTNEGSTEYSNDQEAVDGYASDSTLLH 1956
S+ C+ +T ES + +GS +++ + G + D++ +DG +D+ L
Sbjct: 781 SSSCDGEETDEVESRSSNGSVTIESQENLFNNVKGEVGILNKARDKQELDGIDADADLFD 840
Query: 1957 SNPGMSDSSCKQGGIQPDKRIG---AYSQSDKPAETEHEFSSESVPKGSVLITYPVEGAQ 2127
GMS Q Q K I AY + D P + E S ESV + + + +
Sbjct: 841 ---GMSPVINGQLATQQGKEITFSLAYDE-DGPGKVESVSSDESVTSKTQVDLFEDIKEE 896
Query: 2128 IGASI-CKEN-----------------------LELDKTID---CCSKSGQKSSPDSNLR 2226
G I ++N + DK I C K P S++
Sbjct: 897 AGVFINARDNQDSQVTQMDLNVGTGAVVNSQLATQQDKEIFSFICDENESGKVDPGSSVT 956
Query: 2227 V-THLSSFPD---EVENEALNDSLDFPTNLLGHIPGNK------SIESSVKAGEDEFKSS 2376
+ ++ + F D EVE + + I N+ +ESS ++G + KS
Sbjct: 957 IDSNATFFKDRNREVEGYVCREDVMSKGPSSSAILDNQHRVFDYELESSGRSGNTKSKSP 1016
Query: 2377 DHRDEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITGVAKTIKVH 2556
M + + P R+V LSN +RLLLRKQALKMKKRPVLAVG++N++TGVAK IK H
Sbjct: 1017 V--PTMVRKTLNEMPSRAVHLSNSERLLLRKQALKMKKRPVLAVGRNNIVTGVAKAIKAH 1074
Query: 2557 FEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEAEEPSVTKK 2736
FE++PLAIV+VKGRAKGTS++E+VFKLE+ATG+VLVSQEP+KVILYRGWG + P K
Sbjct: 1075 FERYPLAIVNVKGRAKGTSVREIVFKLEQATGAVLVSQEPSKVILYRGWGAGDSPGNNDK 1134
Query: 2737 KKRNVRSALTGTDDSTTEVVSPQLIKAIRLECGLDGSQENEVT 2865
K T VSP+L+ AIRLECGL ++ + T
Sbjct: 1135 K---------NTIGKKVAPVSPELLAAIRLECGLQNHEKEDAT 1168
Score = 65.5 bits (158), Expect = 1e-07
Identities = 33/106 (31%), Positives = 59/106 (55%)
Frame = +1
Query: 1327 PEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRC 1506
P + ++ E L+ VG+ +K + +G+ G+ +G + +H +W+ E+VK++ D C
Sbjct: 157 PTLAEMSLSTAELRRLRTVGIELKKKVRVGKAGITEGIVNGIHENWRRSEVVKLVCEDLC 216
Query: 1507 IEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLR 1644
+ RT LE ++GG+++ R G II+YRG NY P L+
Sbjct: 217 RLNMKRTHDLLERKTGGLVV----WRSGAKIILYRGVNYKYPYFLK 258
>ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Cucumis sativus]
Length = 1032
Score = 778 bits (2010), Expect = 0.0
Identities = 462/950 (48%), Positives = 589/950 (62%), Gaps = 4/950 (0%)
Frame = +1
Query: 1 IPKAELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRT 180
+ + EL RLRT+GI K+KL VGKAGITEGIVN IHE WRRSEVVKI CEDLCR NMKRT
Sbjct: 164 LTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEYWRRSEVVKIACEDLCRLNMKRT 223
Query: 181 HDLLERKTGGLVVWRSGSIIVLYRGVNYKYPYFLADANITNXXXXXXXXXXXXXXCAVDS 360
HDLLERKTGG+VVWRSGS I+LYRG NY YPYF I +S
Sbjct: 224 HDLLERKTGGIVVWRSGSKIILYRGPNYIYPYF--SHEILEDEGSQDALPASHSDDGGNS 281
Query: 361 AKDSTVECVDGVNSASPSTVNGMAHSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGM 540
+ST+ C++ SA P++ S PSP ++++GVG
Sbjct: 282 ETESTLSCINDERSAGPTS-------------------SVKMPSP-------TLIQGVGA 315
Query: 541 PNKVRFQLPGEVQLVEEADHLLNGLGPRFTDWWGXXXXXXXXXXXXXXXXGYRKPFRLLP 720
PN+VRFQLPGE +L E+A+ LL GLGPRF+DWWG GYRKPFRLLP
Sbjct: 316 PNRVRFQLPGEAELAEDAESLLEGLGPRFSDWWGYDPLPVDADLLPAIVPGYRKPFRLLP 375
Query: 721 YGIRPKLTSDEMTTLKRLSRHLPYQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQ 900
YG++PKLT+DEMT+L+RL+R LP FALGRNR LQGLAAS+++LWEKCEIAKIAVKRGVQ
Sbjct: 376 YGVKPKLTNDEMTSLRRLARPLPCHFALGRNRKLQGLAASIIQLWEKCEIAKIAVKRGVQ 435
Query: 901 NTNSKMMAEELKLLTGGTLIARAGEFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETT 1080
NTN+K+MAEEL+LLTGGTL++R EFIV YRGKDFLP AVS+AM+++R RL E +T
Sbjct: 436 NTNNKLMAEELQLLTGGTLLSRDREFIVLYRGKDFLPFAVSSAMEQKRHMRLH-EMKQTD 494
Query: 1081 EQSSNLDKIPKFEPRNDEPPSVDQVL---QRSDQERRKLKSKEVKLRSTSRIVSSINNKL 1251
+ + K E + P + Q + ++ ERRKL S E +R TS KL
Sbjct: 495 NSPATTGQGLKLEINENGPTNESQSITGWKKIVSERRKLMSSETSMRKTS-------IKL 547
Query: 1252 AVALEKKAQAXXXXXXXXXXXKAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVF 1431
++ALEKKA+A K Q+PE+D+EGIT EERYMLK+VGLRMKP+L +GRRGVF
Sbjct: 548 SIALEKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEERYMLKKVGLRMKPFLLLGRRGVF 607
Query: 1432 DGTIENMHLHWKYRELVKIISTDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYR 1611
DGT+ENMHLHWKYRELVKII+ +R + H AR LEAESGGIL+AVER ++ +AIII+R
Sbjct: 608 DGTVENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESGGILVAVERVKRSFAIIIFR 667
Query: 1612 GKNYMRPVDLRPRTLLNKKQALKRSIEAQRSESLKLHILKLSKNIEHLKRQVVKDGLETK 1791
GKNY RP LRP +LLNKK+ALKRSIEAQR +SLKLH+LKL++N+E LK ++ +D K
Sbjct: 668 GKNYKRPSRLRPESLLNKKEALKRSIEAQRRKSLKLHVLKLTQNVEELKLKLDED----K 723
Query: 1792 SVLSTDCERPDTESETYDGSTLGNYSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGM 1971
+ + + T + +G QT GS + D + +A +ST L N
Sbjct: 724 RAIGMESIKTSTFQQGKEG-----IDEIQTT-GSLKLVADSACLT-HAENSTCLEEN--- 773
Query: 1972 SDSSCKQG-GIQPDKRIGAYSQSDKPAETEHEFSSESVPKGSVLITYPVEGAQIGASICK 2148
+ K+G G I + ++ T F + + + + E + G
Sbjct: 774 EVAKVKKGHGTHSSGTICLDTSVNRLQTTNDVFLIHNGDQSNATVRPSFESVRQG----- 828
Query: 2149 ENLELDKTIDCCSKSGQKSSPDSNLRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNK 2328
+ K D+N + P N +S ++ + H+ NK
Sbjct: 829 --------------NHAKVPMDTNAEFGTIE--PQSGANSLSGESNSGTSDAVHHVAMNK 872
Query: 2329 SIESSVKAGEDEFKSSDHRDEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAV 2508
+ SV+ E+ KS + P LSN++RLLLR+QALKMKK PVL+V
Sbjct: 873 DTKPSVRLEEE--KSPPLLSSTRINQPGYFPANVPQLSNKERLLLRRQALKMKKLPVLSV 930
Query: 2509 GKSNLITGVAKTIKVHFEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVI 2688
GKSN+ITGVAK IK HF+KH LAIV+VKGRAKGTS+QE+VFKLE+ATG+VLVSQEP+KVI
Sbjct: 931 GKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKGTSVQEIVFKLEQATGAVLVSQEPSKVI 990
Query: 2689 LYRGWGEAEEPSVTKKKKRNVRSALTGTDDSTTEVVSPQLIKAIRLECGL 2838
LYRGW E + K + L+ +S +L+ AIR+ECGL
Sbjct: 991 LYRGWEEEDRKQKATMMKNSGEDRLS---------MSSELMAAIRIECGL 1031
Score = 73.2 bits (178), Expect = 7e-10
Identities = 37/102 (36%), Positives = 60/102 (58%)
Frame = +1
Query: 1327 PEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRC 1506
P + +T+EE L+ +G+R+K L +G+ G+ +G + +H +W+ E+VKI D C
Sbjct: 157 PSLAELSLTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEYWRRSEVVKIACEDLC 216
Query: 1507 IEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1632
+ RT LE ++GGI++ R G II+YRG NY+ P
Sbjct: 217 RLNMKRTHDLLERKTGGIVV----WRSGSKIILYRGPNYIYP 254
>ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Glycine max]
Length = 1027
Score = 777 bits (2006), Expect = 0.0
Identities = 458/967 (47%), Positives = 597/967 (61%), Gaps = 24/967 (2%)
Frame = +1
Query: 10 AELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDL 189
AE+RRL T G+ ++KL VGKAG+TEGIVNGIHERWR EVV+I CEDL R+NMKRTHDL
Sbjct: 133 AEIRRLTTAGLAMRQKLRVGKAGLTEGIVNGIHERWRSFEVVRIVCEDLSRFNMKRTHDL 192
Query: 190 LERKTGGLVVWRSGSIIVLYRGVNYKYPYFLADANITNXXXXXXXXXXXXXXCAVDSAKD 369
LERKTGGLVVWRSGS I+LYRG +YKYPYFL+D S D
Sbjct: 193 LERKTGGLVVWRSGSKIILYRGTDYKYPYFLSDKV---------------------SRDD 231
Query: 370 STVECVDGVNSASPSTVNGMAHSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNK 549
+T + + ++ + + +HSS N + ++ S + T ++++GVG PNK
Sbjct: 232 NTGDAMQHMDEDAKNFDKRESHSSEK----NSVTYAGKSSNVKT--AKPALIQGVGSPNK 285
Query: 550 VRFQLPGEVQLVEEADHLLNGLGPRFTDWWGXXXXXXXXXXXXXXXXGYRKPFRLLPYGI 729
VRFQLPGE +L ++AD LL G+GPRF DWWG GYRKPFRLLPYG+
Sbjct: 286 VRFQLPGEAELAKDADSLLTGIGPRFIDWWGYDPLPVDADLLPAVIPGYRKPFRLLPYGV 345
Query: 730 RPKLTSDEMTTLKRLSRHLPYQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTN 909
+PKLT DEMTT++RL +HLP FALGRN+ L GLAA+++KLWE+CEI KIA+KRGV NTN
Sbjct: 346 KPKLTDDEMTTMRRLGKHLPCHFALGRNKKLHGLAAAIIKLWERCEIVKIAIKRGVLNTN 405
Query: 910 SKMMAEELKLLTGGTLIARAGEFIVFYRGKDFLPPAVSTAMDERRK---NRLQTENGETT 1080
++MAEE+K LTGGTLIAR EFIVFYRGKDFLP AVS+A+++RR +L+T N +
Sbjct: 406 GELMAEEIKYLTGGTLIARDKEFIVFYRGKDFLPTAVSSAIEQRRSIGMYKLKTRNSLSV 465
Query: 1081 EQSSNLDKIPKFEPRNDEPPSVDQVLQRSDQERR---KLKSKEVKLRSTSRIVSSINNKL 1251
D+P D ++ + + K +K+ L + S + KL
Sbjct: 466 ---------------TDDPDLKDGTIECDSEVKGMNFKKDTKQGMLTEAEAAIKSTSIKL 510
Query: 1252 AVALEKKAQAXXXXXXXXXXXKAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVF 1431
++ALE+KA+A Q+ E+++EGIT+EE+YML+R+GL+M P+L +GRRGVF
Sbjct: 511 SMALEEKAKAEKLLSELENAESPQEEEINKEGITEEEKYMLRRIGLKMSPFLLLGRRGVF 570
Query: 1432 DGTIENMHLHWKYRELVKII-STDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIY 1608
DGT+ENMHLHWKYRELVKII + +ED + A+ LEAESGGILIAVER K YAII+Y
Sbjct: 571 DGTVENMHLHWKYRELVKIICNKQMSLEDVQQIAQTLEAESGGILIAVERVNKSYAIIVY 630
Query: 1609 RGKNYMRPVDLRPRTLLNKKQALKRSIEAQRSESLKLHILKLSKNIEHLKRQVVKDGLET 1788
RGKNY RP LRPRTLLNKKQALKRSIEAQR ESLKLH+LKL +NI LK Q+ KD
Sbjct: 631 RGKNYSRPASLRPRTLLNKKQALKRSIEAQRCESLKLHVLKLDRNINELKHQMAKDMEAN 690
Query: 1789 KSVLSTDCERPDTES--ETYDGSTLGNYSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSN 1962
S D ++ E E D +HQ S ++ +EA Y T+ +
Sbjct: 691 SKQTSVDNQQAIQEQPVELIDSGG----AHQAEPGNSINWNYPKEASVDY--QQTMQEQS 744
Query: 1963 PGMSDSSCKQGGIQ--PDKRIGAYSQSDKPAETEHEFSSESV------------PKGSVL 2100
+ D G +Q P I S + + + +S P+ S+
Sbjct: 745 VELFDGG---GAVQSEPQNSINWNSPKEASVDNQQAIQGQSFELIDRSEAHHGEPENSID 801
Query: 2101 ITYPVEGAQIGASICKENLELDKTIDCCSKSG-QKSSPDSNLRVTHLSSFPDEVENEALN 2277
P E AS+ + + ++ G + P+S P E + + +
Sbjct: 802 WNSPEE-----ASVDNQQAIQGQPVELIDGGGAHQDEPES-----WSGLIPKETKLDRDS 851
Query: 2278 DSLDFPTNLLGHIPGNKSIESSVKAGEDEFKSSDHRDEMQNGSGVKGPIRSVTLSNRDRL 2457
DS+ + + +K +ESS+ A E + D +++ S + P RSV LSNR+RL
Sbjct: 852 DSV---VDTQHCVSISKVMESSIVASESD---PDLSALVRDMSSNELPSRSVYLSNRERL 905
Query: 2458 LLRKQALKMKKRPVLAVGKSNLITGVAKTIKVHFEKHPLAIVDVKGRAKGTSIQELVFKL 2637
LLRKQALKMKKRPVL+VGKSN++TG+AK IK HF+KHPLAIV+VKGRAKGTSIQE+V KL
Sbjct: 906 LLRKQALKMKKRPVLSVGKSNIVTGLAKAIKAHFQKHPLAIVNVKGRAKGTSIQEVVSKL 965
Query: 2638 EKATGSVLVSQEPNKVILYRGWGEAEEPSVTKKKKRNVRSALTGTDDSTTEVVSPQLIKA 2817
E+ TG+VLVSQE NKVILYRGWGE E+PS + G + + VSP+L++A
Sbjct: 966 EQETGAVLVSQELNKVILYRGWGEGEKPSTA------INFDKVGKEVAAKPGVSPELLEA 1019
Query: 2818 IRLECGL 2838
IR+ECGL
Sbjct: 1020 IRVECGL 1026
>ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|22531018|gb|AAM97013.1|
unknown protein [Arabidopsis thaliana]
gi|37202002|gb|AAQ89616.1| At3g01370 [Arabidopsis
thaliana] gi|332640136|gb|AEE73657.1| CRM family member 2
[Arabidopsis thaliana]
Length = 1011
Score = 776 bits (2003), Expect = 0.0
Identities = 461/958 (48%), Positives = 588/958 (61%), Gaps = 12/958 (1%)
Frame = +1
Query: 1 IPKAELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRT 180
+P AELRRLRTVGI +KL +GKAGITEGIVNGIHERWR +EVVKI CED+ R NMKRT
Sbjct: 166 LPPAELRRLRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRT 225
Query: 181 HDLLERKTGGLVVWRSGSIIVLYRGVNYKYPYFLADANITNXXXXXXXXXXXXXXCAVDS 360
HD+LE KTGGLV+WRSGS I+LYRGVNY+YPYF++D ++ +
Sbjct: 226 HDVLETKTGGLVIWRSGSKILLYRGVNYQYPYFVSDRDLAH------------------- 266
Query: 361 AKDSTVECVDGVNSASPSTVNGMAHSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGM 540
E G +S V+ S S++PS +M + +GVG
Sbjct: 267 ------EAASGASSMDQGVVDSREKQSIA---------ESSAPSITNKMVKPMLTQGVGS 311
Query: 541 PNKVRFQLPGEVQLVEEADHLLNGLGPRFTDWWGXXXXXXXXXXXXXXXXGYRKPFRLLP 720
P+KVRFQLPGEVQLVEEAD LL GLGPRFTDWW YR+PFRLLP
Sbjct: 312 PDKVRFQLPGEVQLVEEADRLLEGLGPRFTDWWAYDPLPVDGDLLPAVVPDYRRPFRLLP 371
Query: 721 YGIRPKLTSDEMTTLKRLSRHLPYQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQ 900
YG+ PKLT DEMTT++RL R LP FALGRNRNLQGLA ++VKLWEKCE+AKIAVKRGVQ
Sbjct: 372 YGVSPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLAVAIVKLWEKCELAKIAVKRGVQ 431
Query: 901 NTNSKMMAEELKLLTGGTLIARAGEFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGET- 1077
NTNS++MAEELK LTGGTLI+R +FIV YRGKDFLP AVS+A++ERR+ + EN
Sbjct: 432 NTNSELMAEELKWLTGGTLISRDKDFIVLYRGKDFLPSAVSSAIEERRRQTMIMENSSVH 491
Query: 1078 -TEQSSNLDKI-PKFEPRNDEPPSVDQV--LQRSDQERRKLKSKEVKLRSTSRIVSSINN 1245
+ + N ++I P+ + E + DQ +Q + R+ S E L TS
Sbjct: 492 GNKLTENEEEIKPRAVKEDIELEAKDQKDHIQTHQMKSRQRNSPEAILEKTSM------- 544
Query: 1246 KLAVALEKKAQAXXXXXXXXXXXKAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRG 1425
KL++ALEKKA A Q ++D+EGIT +E+YML+++GL+MKP+L +GRRG
Sbjct: 545 KLSMALEKKANAEKVLADLENRESPQLSDIDKEGITNDEKYMLRKIGLKMKPFLLLGRRG 604
Query: 1426 VFDGTIENMHLHWKYRELVKIISTDRCIEDAHRTARALEAESGGILIAVERARKGYAIII 1605
VFDGTIENMHLHWKYRELVKII + IE AH+ A LEAESGGIL+AVE KGYAII+
Sbjct: 605 VFDGTIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIV 664
Query: 1606 YRGKNYMRPVDLRPRTLLNKKQALKRSIEAQRSESLKLHILKLSKNIEHLKRQVVKDGLE 1785
YRGKNY RP LRP+TLL+K++ALKRS+EAQR +SLKLH+LKLS NIE L RQ+V+D
Sbjct: 665 YRGKNYERPQCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQLVEDSA- 723
Query: 1786 TKSVLSTDCERPDTESETYDGSTLGNYSHQQTNEGSTEYSNDQEAVD-GYASDSTLLHS- 1959
T DG + ++T TE +E ++ GY+SD ++ S
Sbjct: 724 -------------TNETWSDGESSNMMVEEETENQHTEPEKAREKIELGYSSDLSVPSSG 770
Query: 1960 NPGMSDSSCKQGGIQPDKRIGAYSQSDKPAETEHEFSSESVPKGSVLITYPVEGAQIGAS 2139
D S +G + P + S + E E E +S +G+
Sbjct: 771 EENWEDDS--EGEVDP-----LTTSSQEYQEDESESASSQRHEGN--------------- 808
Query: 2140 ICKENLELDKTIDCCSKSGQKSSPDSNLRVTHLSSFPDEVENEALNDSLDFPTNLLGHIP 2319
+L+ + +++G +N H S P N LN + P G
Sbjct: 809 ----SLDSTANLSVFAETG-----SANASSFHDRSLP---HNSFLNANRKLP----GSST 852
Query: 2320 GNKSIESSVKAGEDEFKSSDHRDEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPV 2499
G+ S S++ R+ G+ LSNR+RL+LRKQALKMKKRP
Sbjct: 853 GSGSQISAL------------RERKSENDGL-----VTDLSNRERLILRKQALKMKKRPP 895
Query: 2500 LAVGKSNLITGVAKTIKVHFEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPN 2679
AVG+SN++TG+A+T+K+HF+K+PLAIV+VKGRA GTS+QE++ KL++ TG++LVSQEP+
Sbjct: 896 FAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRANGTSVQEVIAKLKEETGALLVSQEPS 955
Query: 2680 KVILYRGWGEAEE-----PSVTKKKKRNVRSALTGTDDSTTEVVSPQLIKAIRLECGL 2838
KVILYRGWG EE P+ K N+ S + DD VSP LI+AIRLECGL
Sbjct: 956 KVILYRGWGAEEEMKSFYPNNNVKSSINLPSTRSFVDDPPH--VSPALIEAIRLECGL 1011
>ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Solanum lycopersicum]
Length = 1049
Score = 775 bits (2001), Expect = 0.0
Identities = 459/973 (47%), Positives = 604/973 (62%), Gaps = 19/973 (1%)
Frame = +1
Query: 1 IPKAELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRT 180
+P ELRRLRTVGI ++KL +GKAGITEGIVNGIHERWRR E+VKI CED+CR NMKRT
Sbjct: 173 LPAEELRRLRTVGIALRKKLKIGKAGITEGIVNGIHERWRRIELVKITCEDICRLNMKRT 232
Query: 181 HDLLERKTGGLVVWRSGSIIVLYRGVNYKYPYFLADANITNXXXXXXXXXXXXXXCAVDS 360
H+LLE+KTGGLV+WRSGS I+LYRG +YKYPYF ++ N S
Sbjct: 233 HELLEKKTGGLVIWRSGSNIILYRGADYKYPYFSENSFENN------------------S 274
Query: 361 AKDSTVECVDGVNSASPSTVNGMAHSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGM 540
A+D+ + G M +SS ++ + + + P +++GVG
Sbjct: 275 AQDANPDLFMGAE-------EHMTNSSGIDAVKSDASDRKSPP---------RVIQGVGS 318
Query: 541 PNKVRFQLPGEVQLVEEADHLLNGLGPRFTDWWGXXXXXXXXXXXXXXXXGYRKPFRLLP 720
P++VRF+LPGE + EEAD LL GLGPRFTDWWG GY++PFRLLP
Sbjct: 319 PDRVRFELPGEAEHTEEADKLLEGLGPRFTDWWGCEPLPIDADLLPAIVPGYKRPFRLLP 378
Query: 721 YGIRPKLTSDEMTTLKRLSRHLPYQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQ 900
YG++PKLT+DEMTTL+RL R LP F LGRNR LQGLAA++VKLWEKCEIAK+AVKRGVQ
Sbjct: 379 YGVKPKLTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAAAIVKLWEKCEIAKVAVKRGVQ 438
Query: 901 NTNSKMMAEELKLLTGGTLIARAGEFIVFYRGKDFLPPAVSTAMDERRKNRLQTE--NGE 1074
NTNS++M EELK LTGGTL++R EFIVFYRGKDFLP AVS+A++ERRK + E NG
Sbjct: 439 NTNSELMVEELKWLTGGTLLSRDREFIVFYRGKDFLPSAVSSAIEERRKQVFEEEKRNGF 498
Query: 1075 TTEQSSNLDKIPKFEPRNDEPPSVDQVLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLA 1254
+ ++ ++ + + Q+ QE++KL S E ++ T+ +KL
Sbjct: 499 NSSVANAKERKQSTTESVSDDGHAHRNNQKGVQEKKKLTSMEAAIKRTA-------DKLT 551
Query: 1255 VALEKKAQAXXXXXXXXXXXKAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFD 1434
ALEKKA+A Q+ ++D+EGIT+EER+ML+++GLRMKP+L +GRRGVFD
Sbjct: 552 TALEKKAEAEKLLLELEEDEVPQQSDMDKEGITEEERFMLRKIGLRMKPFLLLGRRGVFD 611
Query: 1435 GTIENMHLHWKYRELVKIISTDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRG 1614
GT+ENMHLHWKYRELVK+I+ + IE+ H+ AR LEAESGGIL+AVER KGYAII+YRG
Sbjct: 612 GTVENMHLHWKYRELVKVITGRKNIEEVHQIARMLEAESGGILVAVERVNKGYAIIVYRG 671
Query: 1615 KNYMRPVDLRPRTLLNKKQALKRSIEAQRSESLKLHILKLSKNIEHLKRQVVKDGLETKS 1794
KNY RP LRP+TLL+K++A+KRSIEAQR +SLKLH+LKL++NIE L+ ++ K+ E
Sbjct: 672 KNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIEALQSRLAKNE-EISH 730
Query: 1795 VLSTD-CERPDTESETYDGSTLGNYSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGM 1971
+ S D +R D + G ++Q E S D +S L +
Sbjct: 731 IQSPDIVDRQVPVMGISDAA--GGTNYQSIVASPIEDSGDAAEDTDPSSQKELSNDFSDT 788
Query: 1972 SDSSCKQGGIQP----DKRIGAYSQSDKPAETEHEFSSESVPKGSVLITYPVEGAQIGAS 2139
S ++ I P + ++ A + +P +H+ S S+ + + V+ G++
Sbjct: 789 DHDSQQEFPINPFFQYEGKVEAMGDTIQP---QHQ-SISSIKESKSMFNVNVDQETFGSA 844
Query: 2140 ICKENLELDKTIDCCSKSGQKSS-PDSNLRVTHLSSF--PDEVENEALNDSLDFPTNLLG 2310
+ S+S KSS + + + SF P EV N+
Sbjct: 845 V--------------SESVSKSSRGEVKIHFSETRSFNKPREVNNKM------------- 877
Query: 2311 HIPGNKSIESSVKAGEDEFKSSDHRDEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKK 2490
S VK + +S+ R E + R V LSNR+RLLLRKQALKMKK
Sbjct: 878 ----EVSQPPPVKP-QQTLRSTRSRSEGMS-------TRRVQLSNRERLLLRKQALKMKK 925
Query: 2491 RPVLAVGKSNLITGVAKTIKVHFEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQ 2670
+PVLAVG+SN++TGVAK IK HF+K+PLAIV+VKGRAKGTS++E+VFKLE+ATG+VLVSQ
Sbjct: 926 QPVLAVGRSNIVTGVAKNIKEHFKKYPLAIVNVKGRAKGTSVREVVFKLEQATGAVLVSQ 985
Query: 2671 EPNKVILYRGWGEAEEPSVTKKKKRNVRSALTGTDDSTTE---------VVSPQLIKAIR 2823
EP+KVILYRGWG E R A G D S ++ +SP+LI AIR
Sbjct: 986 EPSKVILYRGWGPGGE-----------RGASNGNDTSNSKNSREQKELMSISPELISAIR 1034
Query: 2824 LECGLDGSQENEV 2862
LECGL + + EV
Sbjct: 1035 LECGLQSNNDMEV 1047
Score = 65.1 bits (157), Expect = 2e-07
Identities = 36/106 (33%), Positives = 57/106 (53%)
Frame = +1
Query: 1315 KAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIIS 1494
K + P + + EE L+ VG+ ++ L +G+ G+ +G + +H W+ ELVKI
Sbjct: 162 KERAPSLAELTLPAEELRRLRTVGIALRKKLKIGKAGITEGIVNGIHERWRRIELVKITC 221
Query: 1495 TDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1632
D C + RT LE ++GG++I R G II+YRG +Y P
Sbjct: 222 EDICRLNMKRTHELLEKKTGGLVI----WRSGSNIILYRGADYKYP 263
>ref|XP_006296749.1| hypothetical protein CARUB_v10015149mg [Capsella rubella]
gi|482565458|gb|EOA29647.1| hypothetical protein
CARUB_v10015149mg [Capsella rubella]
Length = 1021
Score = 772 bits (1993), Expect = 0.0
Identities = 461/954 (48%), Positives = 587/954 (61%), Gaps = 8/954 (0%)
Frame = +1
Query: 1 IPKAELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRT 180
+P AELRRLR+ GI +KL +GKAGITEGIVNGIHERWR +EVVKI CED+ R NMKRT
Sbjct: 169 LPAAELRRLRSAGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIVCEDISRMNMKRT 228
Query: 181 HDLLERKTGGLVVWRSGSIIVLYRGVNYKYPYFLADANITNXXXXXXXXXXXXXXCAVDS 360
HD+LE KTGGLV+WRSGS I+LYRGVNY+YPYF++D D
Sbjct: 229 HDVLETKTGGLVIWRSGSKILLYRGVNYQYPYFVSDR---------------------DL 267
Query: 361 AKDSTVECVDGVNSASPSTVNGMAHSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGM 540
DS+VE G +S V+ S S+S S ++ +++GVG
Sbjct: 268 GHDSSVETASGGSSMDQEVVDSRDKQSTA---------ESSSLSVTSKTVKPLLIQGVGS 318
Query: 541 PNKVRFQLPGEVQLVEEADHLLNGLGPRFTDWWGXXXXXXXXXXXXXXXXGYRKPFRLLP 720
P+KVRFQLPGEVQLVEEAD LL GLGPRFTDWW YR+PFRLLP
Sbjct: 319 PDKVRFQLPGEVQLVEEADQLLEGLGPRFTDWWAYDPLPVDGDLLPAVVPDYRRPFRLLP 378
Query: 721 YGIRPKLTSDEMTTLKRLSRHLPYQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQ 900
YG+ PKLT DEMTT++RL R LP FALGRNRNLQGLA ++VKLWEKCE+AKIAVKRGVQ
Sbjct: 379 YGVSPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLAVAIVKLWEKCELAKIAVKRGVQ 438
Query: 901 NTNSKMMAEELKLLTGGTLIARAGEFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGET- 1077
NTNS++MAEELK LTGGTLI+R +FIV YRGKDFLP AVS+A++ERR+ + EN
Sbjct: 439 NTNSELMAEELKWLTGGTLISRDKDFIVLYRGKDFLPFAVSSAIEERRRQTMIMENSSAH 498
Query: 1078 -TEQSSNLDKIPKFEPRNDEPPSVDQVLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLA 1254
+ + N D I K + D+ + ++ + +KS++ K S I+ + KL+
Sbjct: 499 GNKMTKNEDVI-KPQAATDDTELEEAEYKKDHVQTHHMKSRQRK--SPEAILEKTSIKLS 555
Query: 1255 VALEKKAQAXXXXXXXXXXXKAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFD 1434
+ALEKKA A Q+ +D+EGIT +E+YML+++GL+MKP+L +GRRGVFD
Sbjct: 556 MALEKKANAEKILAELESRESPQQSNIDKEGITDDEKYMLRKIGLKMKPFLLLGRRGVFD 615
Query: 1435 GTIENMHLHWKYRELVKIISTDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRG 1614
GTIENMHLHWKYRELVKII + IE AH A LEAESGGIL+AVE KGYAII+YRG
Sbjct: 616 GTIENMHLHWKYRELVKIICNEHSIEAAHEVAEILEAESGGILVAVEMVSKGYAIIVYRG 675
Query: 1615 KNYMRPVDLRPRTLLNKKQALKRSIEAQRSESLKLHILKLSKNIEHLKRQVVKDGLETKS 1794
KNY RP LRP+TLL+K++ALKRS+EAQR +SLKLH+LKLS NI+ L RQ+V+D +
Sbjct: 676 KNYERPSCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIDELNRQLVEDSV---- 731
Query: 1795 VLSTDCERPDTESETYDGSTLGNYSHQQTNEGSTEYSNDQEAVD-GYASDSTLLHSNPGM 1971
T+ R D ES ++T E N E ++ GY+S+ +
Sbjct: 732 ---TNETRSDGESSM--------RMVEETENQLIEPENSSEEIELGYSSE---------L 771
Query: 1972 SDSSCKQGGIQPDKRIGAYSQSDKPAETEHEFSSESVPKGSVLITYPVEGAQIGASICKE 2151
S SS + + D + D + HE + + G S E
Sbjct: 772 SVSSSGEENWEDDNE----GEVDSFTTSSHEHQED----------------EPGLSQRHE 811
Query: 2152 NLELDKTIDCCSKSGQKSSPDSNLRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNKS 2331
LD T + S+ S+ H S P + L+ P LG G+ S
Sbjct: 812 GNALDSTANISVLVETGSAKASSF---HDRSMP---QKSFLHTERKVPKQELGSSTGSGS 865
Query: 2332 IESSVKAGEDEFKSSDHRDEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVG 2511
S++ E KS K LSNR+RL+LRKQALKMKKRP AVG
Sbjct: 866 RVSAL----TERKS-------------KNDGLVADLSNRERLILRKQALKMKKRPPFAVG 908
Query: 2512 KSNLITGVAKTIKVHFEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVIL 2691
+SN++TG+A+T+K+HF+K+PLAIV+VKGRA+GTS+QE++ KL++ TG++LVSQEP+KVIL
Sbjct: 909 RSNVVTGLARTLKMHFQKNPLAIVNVKGRAEGTSVQEVIAKLKEETGALLVSQEPSKVIL 968
Query: 2692 YRGWGEAEE-----PSVTKKKKRNVRSALTGTDDSTTEVVSPQLIKAIRLECGL 2838
YRGWG EE P+ K N+ S+ + DD VSP LI+AIRLECGL
Sbjct: 969 YRGWGAEEEMKSFYPNSNVKNSINLTSSKSFVDDPPP--VSPALIEAIRLECGL 1020
>ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
splicing facilitator CRS1, chloroplastic-like [Cucumis
sativus]
Length = 1053
Score = 770 bits (1988), Expect = 0.0
Identities = 459/950 (48%), Positives = 586/950 (61%), Gaps = 4/950 (0%)
Frame = +1
Query: 1 IPKAELRRLRTVGIGEKRKLIVGKAGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRT 180
+ + EL RLRT+GI K+KL VGKAGITEGIVN IHE WRRSEVVKI CEDLCR NMKRT
Sbjct: 184 LTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEFWRRSEVVKIACEDLCRLNMKRT 243
Query: 181 HDLLERKTGGLVVWRSGSIIVLYRGVNYKYPYFLADANITNXXXXXXXXXXXXXXCAVDS 360
HDLLERKTGG+VVWRSGS I+LYRG NY YPYF I +S
Sbjct: 244 HDLLERKTGGIVVWRSGSKIILYRGPNYIYPYF--SHEILEDEGSQDALPASHSDDGGNS 301
Query: 361 AKDSTVECVDGVNSASPSTVNGMAHSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGM 540
+ST+ C++ SA P++ M PSP ++++GVG
Sbjct: 302 ETESTLSCINDERSAGPTSYVKM-------------------PSP-------TLIQGVGA 335
Query: 541 PNKVRFQLPGEVQLVEEADHLLNGLGPRFTDWWGXXXXXXXXXXXXXXXXGYRKPFRLLP 720
PN+VRFQLPGE +L E+A+ LL GLGPRF+DWWG GYRKPFRLLP
Sbjct: 336 PNRVRFQLPGEAELAEDAESLLEGLGPRFSDWWGYDPLPVDADLLPAIVPGYRKPFRLLP 395
Query: 721 YGIRPKLTSDEMTTLKRLSRHLPYQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQ 900
YG++PKLT+DEMT+L+RL+R LP FALGRNR LQGLAAS+++LWEKCEIAKIAVKRGVQ
Sbjct: 396 YGVKPKLTNDEMTSLRRLARPLPCHFALGRNRKLQGLAASIIQLWEKCEIAKIAVKRGVQ 455
Query: 901 NTNSKMMAEELKLLTGGTLIARAGEFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETT 1080
NTN+K+MAEEL+LLTGGTL++R EFIV YRGKDFLP AVS+AM+++R RL E +T
Sbjct: 456 NTNNKLMAEELQLLTGGTLLSRDREFIVLYRGKDFLPFAVSSAMEQKRHMRLH-EMKQTD 514
Query: 1081 EQSSNLDKIPKFEPRNDEPPSVDQVL---QRSDQERRKLKSKEVKLRSTSRIVSSINNKL 1251
+ + K E + P + Q + ++ ERRKL S E +R TS +S
Sbjct: 515 NSPATTGQGLKLEINENGPTNESQSITGWKKIVSERRKLMSSETSMRKTSIKLS------ 568
Query: 1252 AVALEKKAQAXXXXXXXXXXXKAQKPEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVF 1431
V + KKA+A K Q+PE+D+EGIT EERYMLK+VGLRMKP+L +GRRGVF
Sbjct: 569 IVCIRKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEERYMLKKVGLRMKPFLLLGRRGVF 628
Query: 1432 DGTIENMHLHWKYRELVKIISTDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYR 1611
DGT+ENMHLHWKYRELVKII+ +R + H AR LEAESGGIL+AVER ++ +AIII+R
Sbjct: 629 DGTVENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESGGILVAVERVKRSFAIIIFR 688
Query: 1612 GKNYMRPVDLRPRTLLNKKQALKRSIEAQRSESLKLHILKLSKNIEHLKRQVVKDGLETK 1791
GKNY RP LRP +LLNKK+ALKRSIEAQR +SLKLH+LKL++N+E LK ++ +D K
Sbjct: 689 GKNYKRPSRLRPESLLNKKEALKRSIEAQRRKSLKLHVLKLTQNVEELKLKLDED----K 744
Query: 1792 SVLSTDCERPDTESETYDGSTLGNYSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGM 1971
+ + ++ T+ G Q T GS + D + +A +ST L N
Sbjct: 745 RAIGME----SIKTSTFQPGKEGIDEIQTT--GSLKLVADSACLT-HAENSTCLEEN--- 794
Query: 1972 SDSSCKQG-GIQPDKRIGAYSQSDKPAETEHEFSSESVPKGSVLITYPVEGAQIGASICK 2148
+ K+G G I + ++ T F + + + + E + G
Sbjct: 795 EVAKVKKGHGTHSSGTICLDTSVNRLQTTNDVFLIHNGDQSNATVRPSFESVRQG----- 849
Query: 2149 ENLELDKTIDCCSKSGQKSSPDSNLRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNK 2328
+ K D+N + P N +S ++ + H+ NK
Sbjct: 850 --------------NHAKVPMDTNAEFGTIE--PQSGANSLSGESNSGTSDAVHHVAMNK 893
Query: 2329 SIESSVKAGEDEFKSSDHRDEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAV 2508
+ SV+ E+ KS + P LSN++RLLLR+QALKMKK PVL+V
Sbjct: 894 DTKPSVRLEEE--KSPPLLSSTRINQPGYFPANVPQLSNKERLLLRRQALKMKKLPVLSV 951
Query: 2509 GKSNLITGVAKTIKVHFEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVI 2688
GKSN+ITGVAK IK HF+KH LAIV+VKGRAKGTS+QE+VFKLE+ATG+VLVSQEP+KVI
Sbjct: 952 GKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKGTSVQEIVFKLEQATGAVLVSQEPSKVI 1011
Query: 2689 LYRGWGEAEEPSVTKKKKRNVRSALTGTDDSTTEVVSPQLIKAIRLECGL 2838
LYRGW E + K + L+ +S +L+ AIR+ECGL
Sbjct: 1012 LYRGWEEEDRKQKATMMKNSGEDRLS---------MSSELMAAIRIECGL 1052
Score = 72.0 bits (175), Expect = 2e-09
Identities = 37/102 (36%), Positives = 59/102 (57%)
Frame = +1
Query: 1327 PEVDREGITKEERYMLKRVGLRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRC 1506
P + +T+EE L+ +G+R+K L +G+ G+ +G + +H W+ E+VKI D C
Sbjct: 177 PSLAELSLTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEFWRRSEVVKIACEDLC 236
Query: 1507 IEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1632
+ RT LE ++GGI++ R G II+YRG NY+ P
Sbjct: 237 RLNMKRTHDLLERKTGGIVV----WRSGSKIILYRGPNYIYP 274