BLASTX nr result
ID: Cocculus23_contig00005225
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00005225
(1528 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI24961.3| unnamed protein product [Vitis vinifera] 397 e-108
ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-... 397 e-108
gb|EXB95293.1| RNA polymerase sigma factor rpoD [Morus notabilis] 364 6e-98
ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD,... 363 1e-97
ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citr... 362 2e-97
ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana] gi|752165... 352 3e-94
ref|XP_006399871.1| hypothetical protein EUTSA_v10013654mg [Eutr... 349 2e-93
ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD,... 349 2e-93
ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prun... 348 4e-93
ref|XP_006851106.1| hypothetical protein AMTR_s00025p00248060 [A... 348 5e-93
ref|XP_006287834.1| hypothetical protein CARUB_v10001054mg [Caps... 346 1e-92
ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Popu... 318 3e-84
ref|XP_003599439.1| RNA polymerase sigma factor [Medicago trunca... 311 4e-82
ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD,... 309 2e-81
ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD,... 309 2e-81
ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Popu... 308 5e-81
ref|XP_006345495.1| PREDICTED: RNA polymerase sigma factor sigD,... 307 9e-81
ref|XP_002517769.1| RNA polymerase sigma factor rpoD, putative [... 302 2e-79
ref|XP_004499937.1| PREDICTED: RNA polymerase sigma factor sigD,... 302 3e-79
ref|XP_007148895.1| hypothetical protein PHAVU_005G023100g [Phas... 301 5e-79
>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 397 bits (1020), Expect = e-108
Identities = 203/300 (67%), Positives = 244/300 (81%)
Frame = +3
Query: 477 SAYLTRCEEVEFSLYIKEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRA 656
SA LT EE EF L +KE A LE AR+R+ +TRE EPTS++WA+ VGIKR +L+K LC
Sbjct: 20 SAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDKMLCNG 79
Query: 657 RESRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVY 836
RESRERIN SYRRLV SIA YQG+GL+L+DLIQEGS+GLLRGAE+FDP +GYKLSTYVY
Sbjct: 80 RESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVY 139
Query: 837 WWIKQAIIRAVANKSRLIRLPVSMCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVS 1016
WWI+QAI+RA+ANKSR+IRLP S+CEMVAK+AEA VL+RRL R PT +EIA +DV+VS
Sbjct: 140 WWIRQAIVRAIANKSRIIRLPGSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVS 199
Query: 1017 GVRLLCERSRPPISLDRTFADQGSMTLQEIILGPEETRPETMVNKKLMKQEAEQLLTTLS 1196
VRL+ ERSR PIS+D+ QG MTLQEII GP+ET P+ MV ++LMKQE E+ L TL
Sbjct: 200 TVRLVSERSRTPISVDQAVTSQGCMTLQEIIPGPDETTPQKMVKRQLMKQEVERALNTLC 259
Query: 1197 EREAIILRLYFGFDGEITRSFEEIGRLLNLSRERVRQIHYIALTKLRKISAANDLRVYMM 1376
EREA ILRLYFG +GE SFEEIGRL+ LSRERVRQI+ IAL+KLR+ S + L++YMM
Sbjct: 260 EREAYILRLYFGINGETPLSFEEIGRLMKLSRERVRQINSIALSKLRQTSVVDYLKLYMM 319
>ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
Length = 426
Score = 397 bits (1020), Expect = e-108
Identities = 203/300 (67%), Positives = 244/300 (81%)
Frame = +3
Query: 477 SAYLTRCEEVEFSLYIKEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRA 656
SA LT EE EF L +KE A LE AR+R+ +TRE EPTS++WA+ VGIKR +L+K LC
Sbjct: 127 SAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDKMLCNG 186
Query: 657 RESRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVY 836
RESRERIN SYRRLV SIA YQG+GL+L+DLIQEGS+GLLRGAE+FDP +GYKLSTYVY
Sbjct: 187 RESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVY 246
Query: 837 WWIKQAIIRAVANKSRLIRLPVSMCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVS 1016
WWI+QAI+RA+ANKSR+IRLP S+CEMVAK+AEA VL+RRL R PT +EIA +DV+VS
Sbjct: 247 WWIRQAIVRAIANKSRIIRLPGSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVS 306
Query: 1017 GVRLLCERSRPPISLDRTFADQGSMTLQEIILGPEETRPETMVNKKLMKQEAEQLLTTLS 1196
VRL+ ERSR PIS+D+ QG MTLQEII GP+ET P+ MV ++LMKQE E+ L TL
Sbjct: 307 TVRLVSERSRTPISVDQAVTSQGCMTLQEIIPGPDETTPQKMVKRQLMKQEVERALNTLC 366
Query: 1197 EREAIILRLYFGFDGEITRSFEEIGRLLNLSRERVRQIHYIALTKLRKISAANDLRVYMM 1376
EREA ILRLYFG +GE SFEEIGRL+ LSRERVRQI+ IAL+KLR+ S + L++YMM
Sbjct: 367 EREAYILRLYFGINGETPLSFEEIGRLMKLSRERVRQINSIALSKLRQTSVVDYLKLYMM 426
>gb|EXB95293.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 422
Score = 364 bits (934), Expect = 6e-98
Identities = 192/317 (60%), Positives = 242/317 (76%), Gaps = 1/317 (0%)
Frame = +3
Query: 420 EMSKGKDCIEQQWTVRPSSSAYLTRCEEVEFSLYIKEGARLEEARKRLWDTRESEPTSSE 599
E S G+D ++++ P YL+ EE E L +KEGA+LE R R+ ++ + EPTS E
Sbjct: 104 EKSDGED---MRFSIGPMKLGYLSPREEAECCLILKEGAKLEATRLRMTNSEDHEPTSKE 160
Query: 600 WADLVGIKRRNLEKTLCRARESRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVGLL 779
A +G++ R+++K LC RES+ERI+ SYRRLV S+A YQG+GL+ DLIQEGSVGLL
Sbjct: 161 LAKAMGMEMRSIDKMLCDKRESQERISRSYRRLVVSVAAGYQGKGLSFPDLIQEGSVGLL 220
Query: 780 RGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKSRLIRLPVSMCEMVAKVAEANNVLNRR 959
RGA+KFDP +G KLSTYVYWWI+QAIIRA+ NKSR++RLP +MC +VAKV EANNVLN+R
Sbjct: 221 RGAQKFDPQRGNKLSTYVYWWIRQAIIRAIENKSRVVRLPGNMCGIVAKVTEANNVLNKR 280
Query: 960 LGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQGSMTLQEIILGPEETRPET 1139
L R PT +EIA +V V VS VRL+ ER RPPISLDR ++G MTLQEII GPEE PE
Sbjct: 281 LRRFPTYDEIAQVVGVHVSTVRLVSERIRPPISLDRAITERGCMTLQEIIPGPEEISPEK 340
Query: 1140 MVNKKLMKQEAEQLL-TTLSEREAIILRLYFGFDGEITRSFEEIGRLLNLSRERVRQIHY 1316
MV K+LMKQE E+LL T LS+REA +LRL+FG G+I S EEIGRLL LSRER+RQI+
Sbjct: 341 MVRKQLMKQEIEKLLKTVLSDREANVLRLHFGLSGDIPLSCEEIGRLLKLSRERIRQING 400
Query: 1317 IALTKLRKISAANDLRV 1367
IAL+KL++ + NDLR+
Sbjct: 401 IALSKLQQTNIVNDLRI 417
>ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Citrus sinensis]
Length = 436
Score = 363 bits (931), Expect = 1e-97
Identities = 191/302 (63%), Positives = 232/302 (76%)
Frame = +3
Query: 471 SSSAYLTRCEEVEFSLYIKEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLC 650
+S+ YLT EE E +KEGA+LEEARK + E E S + A G+K+ ++K LC
Sbjct: 135 TSNLYLTPSEEAEICYSLKEGAKLEEARKTVAQAEEHESISKQLAKATGMKQSKVDKILC 194
Query: 651 RARESRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTY 830
+ RES+ERI SYR LV SIAT YQG+GL+L+DLIQEGS+GLLRGA++F+P +GYKLSTY
Sbjct: 195 KERESQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTY 254
Query: 831 VYWWIKQAIIRAVANKSRLIRLPVSMCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVS 1010
VYWWIKQAIIR +ANKSR IRLP SM MVAK+AEANNVL+RRL R PT EIA M+++
Sbjct: 255 VYWWIKQAIIRTIANKSRTIRLPGSMSGMVAKIAEANNVLSRRLRRMPTDSEIAEMLNIH 314
Query: 1011 VSGVRLLCERSRPPISLDRTFADQGSMTLQEIILGPEETRPETMVNKKLMKQEAEQLLTT 1190
VS VRL ER+R PISLD D G MTLQ+II GP+ET PE MV K+LMKQE ++LL T
Sbjct: 315 VSNVRLAIERTRHPISLDGAITDTGCMTLQDIIPGPDETMPEKMVQKQLMKQELKELLQT 374
Query: 1191 LSEREAIILRLYFGFDGEITRSFEEIGRLLNLSRERVRQIHYIALTKLRKISAANDLRVY 1370
LSEREA ILRL+FG DG+ S +EIGRLL LSRERVRQI IALTKL++ + N+L+VY
Sbjct: 375 LSEREADILRLHFGLDGQTPVSCKEIGRLLTLSRERVRQIRGIALTKLQQTNIRNNLKVY 434
Query: 1371 MM 1376
M+
Sbjct: 435 MV 436
>ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citrus clementina]
gi|557541154|gb|ESR52198.1| hypothetical protein
CICLE_v10033747mg [Citrus clementina]
Length = 436
Score = 362 bits (929), Expect = 2e-97
Identities = 191/302 (63%), Positives = 232/302 (76%)
Frame = +3
Query: 471 SSSAYLTRCEEVEFSLYIKEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLC 650
+S+ YLT EE E +KEGA+LEEARK + E E S + A G+K+ ++K LC
Sbjct: 135 TSNLYLTPSEEAEICYSLKEGAKLEEARKTVAQAEEHESISKQLAKATGMKQSKVDKILC 194
Query: 651 RARESRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTY 830
+ RES+ERI SYR LV SIAT YQG+GL+L+DLIQEGS+GLLRGA++F+P +GYKLSTY
Sbjct: 195 KERESQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTY 254
Query: 831 VYWWIKQAIIRAVANKSRLIRLPVSMCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVS 1010
VYWWIKQAIIR +ANKSR IRLP SM MVAK+AEANNVL+RRL R PT EIA M+++
Sbjct: 255 VYWWIKQAIIRTIANKSRTIRLPGSMSGMVAKIAEANNVLSRRLRRMPTDNEIAEMLNIH 314
Query: 1011 VSGVRLLCERSRPPISLDRTFADQGSMTLQEIILGPEETRPETMVNKKLMKQEAEQLLTT 1190
VS VRL ER+R PISLD D G MTLQ+II GP+ET PE MV K+LMKQE ++LL T
Sbjct: 315 VSTVRLAIERTRHPISLDGAITDTGCMTLQDIIPGPDETMPEKMVQKQLMKQELKELLQT 374
Query: 1191 LSEREAIILRLYFGFDGEITRSFEEIGRLLNLSRERVRQIHYIALTKLRKISAANDLRVY 1370
LSEREA ILRL+FG DG+ S +EIGRLL LSRERVRQI IALTKL++ + N+L+VY
Sbjct: 375 LSEREADILRLHFGLDGQTPVSCKEIGRLLTLSRERVRQIRGIALTKLQQTNIRNNLKVY 434
Query: 1371 MM 1376
M+
Sbjct: 435 MV 436
>ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana]
gi|75216509|sp|Q9ZSL6.1|SIGD_ARATH RecName: Full=RNA
polymerase sigma factor sigD, chloroplastic; Short=Sigma
factor D; Short=Sigma-D; AltName: Full=RNA polymerase
sigma factor sig4; Short=Atsig4; Short=Sigma factor 4;
Flags: Precursor gi|3983260|gb|AAC97954.1| sigma-like
factor [Arabidopsis thaliana] gi|4972296|dbj|BAA78110.1|
RNA polymerase sigma subunit SigD [Arabidopsis thaliana]
gi|9758039|dbj|BAB08700.1| sigma-like factor [Arabidopsis
thaliana] gi|332004550|gb|AED91933.1| sigma factor 4
[Arabidopsis thaliana]
Length = 419
Score = 352 bits (902), Expect = 3e-94
Identities = 183/303 (60%), Positives = 230/303 (75%)
Frame = +3
Query: 462 VRPSSSAYLTRCEEVEFSLYIKEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEK 641
V S S +L+R EEV+ LY+KEGA+LE + E+E S A G K+R+ +
Sbjct: 115 VGASRSGFLSRLEEVQLCLYLKEGAKLENLGTSV---EENEMVSVLLASGRGKKKRSANE 171
Query: 642 TLCRARESRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKL 821
LCR +E+RE+I YRRLV SIAT YQG+GLNL+DLIQEGS+GLLRGAE+FDP +GYKL
Sbjct: 172 ILCRRKEAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKL 231
Query: 822 STYVYWWIKQAIIRAVANKSRLIRLPVSMCEMVAKVAEANNVLNRRLGRQPTCEEIANMV 1001
STYVYWWIKQAI+RA+A+KSRL++LP SM E+ AKVAEA+NVL R+L RQP+CEEIA +
Sbjct: 232 STYVYWWIKQAILRAIAHKSRLVKLPGSMWELTAKVAEASNVLTRKLRRQPSCEEIAEHL 291
Query: 1002 DVSVSGVRLLCERSRPPISLDRTFADQGSMTLQEIILGPEETRPETMVNKKLMKQEAEQL 1181
+++VS VRL ERSR P+SLDR + G MTLQEI+ GP+ETRPE MV ++ MK E EQL
Sbjct: 292 NLNVSAVRLAVERSRSPVSLDRVASQNGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQL 351
Query: 1182 LTTLSEREAIILRLYFGFDGEITRSFEEIGRLLNLSRERVRQIHYIALTKLRKISAANDL 1361
L +L+ RE+ +L LYFG +GE SFEEIG+ L LSRERVRQI+ IAL KLR + NDL
Sbjct: 352 LGSLTARESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALKKLRNVHNVNDL 411
Query: 1362 RVY 1370
++Y
Sbjct: 412 KIY 414
>ref|XP_006399871.1| hypothetical protein EUTSA_v10013654mg [Eutrema salsugineum]
gi|557100961|gb|ESQ41324.1| hypothetical protein
EUTSA_v10013654mg [Eutrema salsugineum]
Length = 421
Score = 349 bits (896), Expect = 2e-93
Identities = 183/303 (60%), Positives = 228/303 (75%)
Frame = +3
Query: 462 VRPSSSAYLTRCEEVEFSLYIKEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEK 641
V S S +L+R EEV+ LY+KEGA+LE + E+E S + G K+R+ +
Sbjct: 117 VAASRSGFLSRLEEVQLCLYLKEGAKLENVGTSV---EENEIVSVLLSSGKGKKKRSANE 173
Query: 642 TLCRARESRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKL 821
LCR RE+RE+I YRRLV SIAT YQG+GLNL+DLIQEGS+GLLRGAE+FDP +GYKL
Sbjct: 174 ILCRRREAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPERGYKL 233
Query: 822 STYVYWWIKQAIIRAVANKSRLIRLPVSMCEMVAKVAEANNVLNRRLGRQPTCEEIANMV 1001
STYVYWWIKQAI+RA+A+KSRL++LP SM E+ AKVAEA+NVL R+L R P+CEEIA +
Sbjct: 234 STYVYWWIKQAILRAIAHKSRLVKLPGSMWELTAKVAEASNVLTRKLKRIPSCEEIAEHL 293
Query: 1002 DVSVSGVRLLCERSRPPISLDRTFADQGSMTLQEIILGPEETRPETMVNKKLMKQEAEQL 1181
++ VS VRL ER R P+SLDR + G MTLQEI+ GP+ETRPE MV ++ MK E EQL
Sbjct: 294 NIHVSAVRLAVERGRSPVSLDRVASLNGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQL 353
Query: 1182 LTTLSEREAIILRLYFGFDGEITRSFEEIGRLLNLSRERVRQIHYIALTKLRKISAANDL 1361
L +L+ RE+ +L LYFG +GE SFEEIG+ L LSRERVRQI+ IALTKLR + NDL
Sbjct: 354 LGSLTARESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALTKLRNVHNVNDL 413
Query: 1362 RVY 1370
R+Y
Sbjct: 414 RLY 416
>ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 452
Score = 349 bits (896), Expect = 2e-93
Identities = 206/457 (45%), Positives = 274/457 (59%), Gaps = 11/457 (2%)
Frame = +3
Query: 39 LSMATICASSSNHSPTLHTISLYSVPTKPSLRTLQPSPSSSHKHGLTLVSXXXXXXXXXX 218
+++ T S N P L T+SL PT L+T P PSS K G LVS
Sbjct: 24 MAITTGICPSPNQPPPLPTLSL---PTLTPLKTNLPFPSS--KFGANLVSNDTLVHGAAA 78
Query: 219 XXXXXXXXXXXXXXXXXXXXXXXNEMSLVGGEAEFLRNSDGIMTLSGRRCVCG-MXXXXX 395
++L AE R++ + S C
Sbjct: 79 -----------------------EAVALARAVAEVTRDAAAVRVGSSEVWSCNESGGGMM 115
Query: 396 XXXXXAVAEMSKGKDCIEQQWTVRPS----------SSAYLTRCEEVEFSLYIKEGARLE 545
KG +C + + R S YL+ EE + + +KEGA+LE
Sbjct: 116 VRRKKRRRRRRKGLECFDDEERNRELEDGRFSFGVVSYGYLSPREEADCCMSLKEGAKLE 175
Query: 546 EARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARESRERINLSYRRLVASIATAYQ 725
R R + +E EPTS + A+ + IK +++K +C RES+ERI SYR LV S+A++YQ
Sbjct: 176 SERTRFTEAQEHEPTSKQLANAMRIKMSSIDKVICNRRESQERIIKSYRGLVVSVASSYQ 235
Query: 726 GRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKSRLIRLPVS 905
G+GL+L+DLIQEGS+GLLRGAEKFDP +G KLSTYVYWWI+QAIIRA+ NKSR+IRLP
Sbjct: 236 GKGLSLQDLIQEGSIGLLRGAEKFDPERGLKLSTYVYWWIRQAIIRAIENKSRIIRLPGH 295
Query: 906 MCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQG 1085
MC ++AK+ A N+R R P+ +EIA M++V S VRL+CERSR P+SLDR DQG
Sbjct: 296 MCGVMAKITRAKKNFNQRFQRLPSHDEIAEMINVQASIVRLVCERSRLPLSLDRVVTDQG 355
Query: 1086 SMTLQEIILGPEETRPETMVNKKLMKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFEE 1265
M LQ+II GP+E PETM+ K+LMKQE E+LL LS+REA +LRL+FG +G+ +SFEE
Sbjct: 356 CMALQDIIRGPDEMMPETMLKKQLMKQEMEKLLNRLSDREAEVLRLHFGLNGDTPQSFEE 415
Query: 1266 IGRLLNLSRERVRQIHYIALTKLRKISAANDLRVYMM 1376
IGRLL LSRERVRQI+ IAL+KL++ S DL++Y++
Sbjct: 416 IGRLLKLSRERVRQINSIALSKLKQTSTLEDLKLYIV 452
>ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prunus persica]
gi|462415663|gb|EMJ20400.1| hypothetical protein
PRUPE_ppa017025mg [Prunus persica]
Length = 440
Score = 348 bits (893), Expect = 4e-93
Identities = 177/298 (59%), Positives = 236/298 (79%)
Frame = +3
Query: 483 YLTRCEEVEFSLYIKEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARE 662
+L+ EE E L +KEGARLE R R+ + ++ EPTS + A +G+K R+++K LC+ RE
Sbjct: 143 HLSPREEAECCLSLKEGARLESERFRVVEAQKHEPTSKQLAKAMGMKMRSIDKVLCKRRE 202
Query: 663 SRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWW 842
S+E+I SYR LV S+A++YQG+GL+ +DLIQEGS+GLLRGAEKFD + +KLSTYVYWW
Sbjct: 203 SQEKIIRSYRGLVVSVASSYQGKGLSFQDLIQEGSIGLLRGAEKFDHEREWKLSTYVYWW 262
Query: 843 IKQAIIRAVANKSRLIRLPVSMCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGV 1022
I+QAIIRA+ NKSR+IRLP +C M+AK+ +A N LN+R R P+ +EIA ++ V+ S V
Sbjct: 263 IRQAIIRAIENKSRIIRLPGHVCGMMAKITKAQNSLNQRFQRLPSHDEIAEVIKVNASTV 322
Query: 1023 RLLCERSRPPISLDRTFADQGSMTLQEIILGPEETRPETMVNKKLMKQEAEQLLTTLSER 1202
+L+CERSRPPISLDR +GSMTLQEII GPEE PE M+ ++LMKQE E+LL TLS+R
Sbjct: 323 KLVCERSRPPISLDRVATVRGSMTLQEIIQGPEEMMPEKMLIRQLMKQEVEKLLKTLSDR 382
Query: 1203 EAIILRLYFGFDGEITRSFEEIGRLLNLSRERVRQIHYIALTKLRKISAANDLRVYMM 1376
EA +LRL+FG +GE +SFEEIGRLL LSRERVRQI+ IAL+KLR+ S ++L++Y++
Sbjct: 383 EANVLRLHFGLNGESPQSFEEIGRLLKLSRERVRQINGIALSKLRQTSILDNLKLYIV 440
>ref|XP_006851106.1| hypothetical protein AMTR_s00025p00248060 [Amborella trichopoda]
gi|548854777|gb|ERN12687.1| hypothetical protein
AMTR_s00025p00248060 [Amborella trichopoda]
Length = 449
Score = 348 bits (892), Expect = 5e-93
Identities = 180/298 (60%), Positives = 226/298 (75%)
Frame = +3
Query: 471 SSSAYLTRCEEVEFSLYIKEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLC 650
SS YLTR EE EFSL ++EGARLE R++L + R EP+ +WA+ VG++ ++E+ L
Sbjct: 146 SSEDYLTRREEAEFSLCLREGARLEGIRRKLREKRGREPSRGQWAEAVGMRESSMERRLG 205
Query: 651 RARESRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTY 830
ARE R RI SYRRLV SIAT+Y G+G++L DLIQEGS+GLLRGAE+FD +GYKLSTY
Sbjct: 206 IARECRNRITNSYRRLVVSIATSYPGKGMSLSDLIQEGSLGLLRGAERFDHRRGYKLSTY 265
Query: 831 VYWWIKQAIIRAVANKSRLIRLPVSMCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVS 1010
VYWWIKQAII+A+A KSR++RLP SMC VAKV+EA+ VL RLGR+P+ EEIA ++
Sbjct: 266 VYWWIKQAIIKAIATKSRIVRLPGSMCATVAKVSEASGVLMSRLGRRPSQEEIAEKTGIA 325
Query: 1011 VSGVRLLCERSRPPISLDRTFADQGSMTLQEIILGPEETRPETMVNKKLMKQEAEQLLTT 1190
+S VRL+ ER R P+S+D+ G ++L++II GPEETRPE MV ++ MK E LL T
Sbjct: 326 LSRVRLVTERCRLPLSIDQPLGRHGDISLKDIIAGPEETRPEEMVKREWMKGTMEMLLQT 385
Query: 1191 LSEREAIILRLYFGFDGEITRSFEEIGRLLNLSRERVRQIHYIALTKLRKISAANDLR 1364
LSERE I+RL FG +GE +S +EIGRLLNLSRERVRQIHYIAL KLR+ A LR
Sbjct: 386 LSEREECIVRLQFGMNGETPKSCDEIGRLLNLSRERVRQIHYIALAKLRQQHATQHLR 443
>ref|XP_006287834.1| hypothetical protein CARUB_v10001054mg [Capsella rubella]
gi|482556540|gb|EOA20732.1| hypothetical protein
CARUB_v10001054mg [Capsella rubella]
Length = 419
Score = 346 bits (888), Expect = 1e-92
Identities = 178/300 (59%), Positives = 228/300 (76%)
Frame = +3
Query: 471 SSSAYLTRCEEVEFSLYIKEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLC 650
S S +L+R EEV+ LY+KEGA+LE +E+E S + G K+R+ + LC
Sbjct: 118 SRSGFLSRLEEVQLCLYLKEGAKLENLGT---SAQENEMVSVLLSSGKGKKKRSANEILC 174
Query: 651 RARESRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTY 830
R +E+RE+I YRRLV SIAT YQG+GLNL+DLIQEGS+GLLRGAE+FDP +GYKLSTY
Sbjct: 175 RRKEAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTY 234
Query: 831 VYWWIKQAIIRAVANKSRLIRLPVSMCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVS 1010
VYWWIKQAI+RA+A+KSRL++LP SM E+ A+VAEA+NVL R+L RQP+CEEIA +++
Sbjct: 235 VYWWIKQAILRAIAHKSRLVKLPGSMWELTARVAEASNVLTRKLRRQPSCEEIAEHLNLH 294
Query: 1011 VSGVRLLCERSRPPISLDRTFADQGSMTLQEIILGPEETRPETMVNKKLMKQEAEQLLTT 1190
VS VRL E+SR P+SLDR + G MTLQEI+ GP+ETRPE MV ++ +K E EQLL +
Sbjct: 295 VSAVRLAVEKSRSPVSLDRVASQNGRMTLQEIVRGPDETRPEEMVKREHIKNEIEQLLGS 354
Query: 1191 LSEREAIILRLYFGFDGEITRSFEEIGRLLNLSRERVRQIHYIALTKLRKISAANDLRVY 1370
L+ RE+ +L LYFG +GE SFEEIG+ L LSRERVRQI+ IAL KLR + NDL++Y
Sbjct: 355 LTARESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALKKLRNVHNVNDLKIY 414
>ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331146|gb|ERP56881.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 423
Score = 318 bits (816), Expect = 3e-84
Identities = 165/297 (55%), Positives = 223/297 (75%), Gaps = 1/297 (0%)
Frame = +3
Query: 483 YLTRCEEVEFSLYIKEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARE 662
YL+ EE EFS+ +K AR+E AR+R+ + +E +PTS + A + +++ +++ LC+ RE
Sbjct: 125 YLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCKGRE 184
Query: 663 SRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWW 842
SRE+I SYRRLV SIAT+YQ +GL+L+DLIQEGS+GLLRGAE+FDP +GYKLSTYVYWW
Sbjct: 185 SREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYVYWW 244
Query: 843 IKQAIIRAVANKSRLIRLPVSMCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGV 1022
IK+AI+ A++N +R++RLP +VAK+A ANN L+ +L R P+ +EIA ++++ VS V
Sbjct: 245 IKEAILTAISNNTRMVRLPRRWWMLVAKIAGANNDLSNKLRRSPSYDEIAKVLNMKVSTV 304
Query: 1023 RLLCERSRPPISLDRTFADQGSMTLQEIILGPEETRPETMVNKKLMKQEAEQLL-TTLSE 1199
RL ER R PISLD+ Q S+TLQEII GP+ET PE MV ++L+KQE E+L T L+E
Sbjct: 305 RLGFERGRSPISLDQAVLGQNSLTLQEIIPGPDETIPENMVKRELLKQELEKLFQTVLTE 364
Query: 1200 REAIILRLYFGFDGEITRSFEEIGRLLNLSRERVRQIHYIALTKLRKISAANDLRVY 1370
REA ILRL+FG +G+ +S EEIGRL+ LSRERVRQI AL+KLR L+ Y
Sbjct: 365 REAHILRLHFGLNGQTPQSCEEIGRLVKLSRERVRQIIGTALSKLRHKEIVEPLKAY 421
>ref|XP_003599439.1| RNA polymerase sigma factor [Medicago truncatula]
gi|355488487|gb|AES69690.1| RNA polymerase sigma factor
[Medicago truncatula]
Length = 403
Score = 311 bits (798), Expect = 4e-82
Identities = 168/321 (52%), Positives = 229/321 (71%)
Frame = +3
Query: 414 VAEMSKGKDCIEQQWTVRPSSSAYLTRCEEVEFSLYIKEGARLEEARKRLWDTRESEPTS 593
V E + + + Q+ V +S +L+ +E E L +KEGA++E A++R+ + +E
Sbjct: 88 VEEENIQNNFLRQKVVVGSVTSGFLSSTDEAELCLCLKEGAKIEVAKQRMTE-QEGNSAI 146
Query: 594 SEWADLVGIKRRNLEKTLCRARESRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVG 773
S + ++ +++K L R+S+ER+ YR LVASIA YQG+GL+++DLIQEG++G
Sbjct: 147 SRFT----LENTSVDKVLINTRKSKERLARDYRGLVASIAAHYQGKGLSIQDLIQEGTIG 202
Query: 774 LLRGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKSRLIRLPVSMCEMVAKVAEANNVLN 953
LL GAEKFDP +G KLSTYVYWWIKQ II+A+A KSRLIRLP MVAK+AEANNVL
Sbjct: 203 LLHGAEKFDPNRGCKLSTYVYWWIKQGIIKALAKKSRLIRLPGEKYGMVAKIAEANNVLR 262
Query: 954 RRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQGSMTLQEIILGPEETRP 1133
RRL R+PT EIA +++V+VS V+L+ ERSR PISLDR+ DQ ++ L+EII GP E P
Sbjct: 263 RRLRRKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSITDQSNLILKEIIPGPVEMIP 322
Query: 1134 ETMVNKKLMKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFEEIGRLLNLSRERVRQIH 1313
E MV ++LMKQ +LL TL +RE I+RLYFG +GE SFEEIG+LL LSRER+RQIH
Sbjct: 323 EKMVERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPLSFEEIGKLLKLSRERIRQIH 382
Query: 1314 YIALTKLRKISAANDLRVYMM 1376
IAL+KL + + + L+ Y++
Sbjct: 383 GIALSKLEQNTLVDSLKFYVV 403
>ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Cucumis sativus]
Length = 341
Score = 309 bits (791), Expect = 2e-81
Identities = 159/313 (50%), Positives = 221/313 (70%), Gaps = 3/313 (0%)
Frame = +3
Query: 447 EQQWTVR---PSSSAYLTRCEEVEFSLYIKEGARLEEARKRLWDTRESEPTSSEWADLVG 617
E+ W P YL+ EE E L +KE LE + R+ +T+E EPT+ + A +G
Sbjct: 29 EENWIALSSGPLRPGYLSPKEEAELCLCLKEAVLLENVKTRIMETQEHEPTNKQLAIAMG 88
Query: 618 IKRRNLEKTLCRARESRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVGLLRGAEKF 797
K +++ LCRARESR+R+ Y +LV SIA YQG+GL+L+DL QEG++GLL+GAE+F
Sbjct: 89 TKSGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERF 148
Query: 798 DPAKGYKLSTYVYWWIKQAIIRAVANKSRLIRLPVSMCEMVAKVAEANNVLNRRLGRQPT 977
+P +G+KLSTY YWWI+QAIIRA+ KSRL+RLP M +MVA++AE NN L +L R PT
Sbjct: 149 EPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEENNHLGIKLSRPPT 208
Query: 978 CEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQGSMTLQEIILGPEETRPETMVNKKL 1157
+E+A + V +S +RL+ ERS+ PIS+++ D+ +TLQEI+ GP+ PE MV +KL
Sbjct: 209 NKEVAESLKVHLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPGPDNLTPENMVMRKL 268
Query: 1158 MKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFEEIGRLLNLSRERVRQIHYIALTKLR 1337
MKQE ++LL TLS+REA IL LYFG +GEI +SFEEIG+ LNLSRE +RQ + L+KL+
Sbjct: 269 MKQELKRLLNTLSKREARILSLYFGLNGEIPQSFEEIGKSLNLSRETIRQTNIATLSKLK 328
Query: 1338 KISAANDLRVYMM 1376
K + L+ Y++
Sbjct: 329 KTDVLDYLKDYLV 341
>ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Cucumis sativus]
Length = 436
Score = 309 bits (791), Expect = 2e-81
Identities = 159/313 (50%), Positives = 221/313 (70%), Gaps = 3/313 (0%)
Frame = +3
Query: 447 EQQWTVR---PSSSAYLTRCEEVEFSLYIKEGARLEEARKRLWDTRESEPTSSEWADLVG 617
E+ W P YL+ EE E L +KE LE + R+ +T+E EPT+ + A +G
Sbjct: 124 EENWIALSSGPLRPGYLSPKEEAELCLCLKEAVLLENVKTRIMETQEHEPTNKQLAIAMG 183
Query: 618 IKRRNLEKTLCRARESRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVGLLRGAEKF 797
K +++ LCRARESR+R+ Y +LV SIA YQG+GL+L+DL QEG++GLL+GAE+F
Sbjct: 184 TKSGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERF 243
Query: 798 DPAKGYKLSTYVYWWIKQAIIRAVANKSRLIRLPVSMCEMVAKVAEANNVLNRRLGRQPT 977
+P +G+KLSTY YWWI+QAIIRA+ KSRL+RLP M +MVA++AE NN L +L R PT
Sbjct: 244 EPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEENNHLGIKLSRPPT 303
Query: 978 CEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQGSMTLQEIILGPEETRPETMVNKKL 1157
+E+A + V +S +RL+ ERS+ PIS+++ D+ +TLQEI+ GP+ PE MV +KL
Sbjct: 304 NKEVAESLKVHLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPGPDNLTPENMVMRKL 363
Query: 1158 MKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFEEIGRLLNLSRERVRQIHYIALTKLR 1337
MKQE ++LL TLS+REA IL LYFG +GEI +SFEEIG+ LNLSRE +RQ + L+KL+
Sbjct: 364 MKQELKRLLNTLSKREARILSLYFGLNGEIPQSFEEIGKSLNLSRETIRQTNIATLSKLK 423
Query: 1338 KISAANDLRVYMM 1376
K + L+ Y++
Sbjct: 424 KTDVLDYLKDYLV 436
>ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331145|gb|ERP56880.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 419
Score = 308 bits (788), Expect = 5e-81
Identities = 163/297 (54%), Positives = 220/297 (74%), Gaps = 1/297 (0%)
Frame = +3
Query: 483 YLTRCEEVEFSLYIKEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARE 662
YL+ EE EFS+ +K AR+E AR+R+ + +E +PTS + A + +++ +++ LC+ RE
Sbjct: 125 YLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCKGRE 184
Query: 663 SRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWW 842
SRE+I SYRRLV SIAT+YQ +GL+L+DLIQEGS+GLLRGAE+FDP +GYKLSTYVYWW
Sbjct: 185 SREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYVYWW 244
Query: 843 IKQAIIRAVANKSRLIRLPVSMCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGV 1022
IK+AI+ A++N +R+ R +VAK+A ANN L+ +L R P+ +EIA ++++ VS V
Sbjct: 245 IKEAILTAISNNTRMRR----WWMLVAKIAGANNDLSNKLRRSPSYDEIAKVLNMKVSTV 300
Query: 1023 RLLCERSRPPISLDRTFADQGSMTLQEIILGPEETRPETMVNKKLMKQEAEQLL-TTLSE 1199
RL ER R PISLD+ Q S+TLQEII GP+ET PE MV ++L+KQE E+L T L+E
Sbjct: 301 RLGFERGRSPISLDQAVLGQNSLTLQEIIPGPDETIPENMVKRELLKQELEKLFQTVLTE 360
Query: 1200 REAIILRLYFGFDGEITRSFEEIGRLLNLSRERVRQIHYIALTKLRKISAANDLRVY 1370
REA ILRL+FG +G+ +S EEIGRL+ LSRERVRQI AL+KLR L+ Y
Sbjct: 361 REAHILRLHFGLNGQTPQSCEEIGRLVKLSRERVRQIIGTALSKLRHKEIVEPLKAY 417
>ref|XP_006345495.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Solanum tuberosum]
Length = 421
Score = 307 bits (786), Expect = 9e-81
Identities = 158/298 (53%), Positives = 221/298 (74%), Gaps = 1/298 (0%)
Frame = +3
Query: 483 YLTRCEEVEFSLYIKEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKTLCRARE 662
YLT EE ++S Y+KE AR+E RK + +T E + +S + A G+ + L+K L A+E
Sbjct: 123 YLTHEEEAKYSWYLKEEARIEILRKMVEETSEIDLSSKQLAKAAGMSTQRLDKLLINAKE 182
Query: 663 SRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLSTYVYWW 842
S+++I YR LV S+A +YQG+GL+L+DLIQEGS+GLL GA+KF+P KGYKLSTY YWW
Sbjct: 183 SQKKIIQCYRGLVVSVAASYQGKGLSLQDLIQEGSIGLLHGAKKFNPKKGYKLSTYAYWW 242
Query: 843 IKQAIIRAVANKSRLIRLPVSMCEMVAKVAEANNVLNRRLGRQPTCEEIANMVDVSVSGV 1022
I+QAI RAVANKSR+IRLP S+ E+V K+ AN L+R+L R P+ +EIA + + VS V
Sbjct: 243 IRQAISRAVANKSRVIRLPGSISELVPKICNANTELSRKLRRMPSYDEIAEALGMDVSTV 302
Query: 1023 RLLCERSRPPISLDRTFADQGSMTLQEIILGPEETRPETMVNKKLMKQEAEQLL-TTLSE 1199
RL+ ER+R PIS+D+ QG M+LQ II GPE+T PE V +++MKQ+ E++L L +
Sbjct: 303 RLVIERNRAPISIDQIVTSQGYMSLQNIISGPEDTTPEENVKRQMMKQDLEKILHNVLCD 362
Query: 1200 REAIILRLYFGFDGEITRSFEEIGRLLNLSRERVRQIHYIALTKLRKISAANDLRVYM 1373
REA IL+L+FG +G+ +SFEEIGR+L LSRER+RQI+ AL+KLR+ S ++ ++Y+
Sbjct: 363 REAKILKLHFGLNGDNPQSFEEIGRVLKLSRERIRQINCTALSKLRESSMLDNFKMYI 420
>ref|XP_002517769.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223543041|gb|EEF44576.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 389
Score = 302 bits (774), Expect = 2e-79
Identities = 152/278 (54%), Positives = 208/278 (74%)
Frame = +3
Query: 465 RPSSSAYLTRCEEVEFSLYIKEGARLEEARKRLWDTRESEPTSSEWADLVGIKRRNLEKT 644
+P ++ YL+ EE EF L +K+ AR+E AR+R+ +T+E EPTS + A+ + ++++N++K
Sbjct: 110 QPVNNGYLSSIEEAEFCLCLKDHARVEAARRRIAETQEHEPTSKQLAEALRMRKKNVDKI 169
Query: 645 LCRARESRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDPAKGYKLS 824
LC+ R+SRERI +YRRLV SIA Y+G+GL+L+DLIQEGS+GLLRGAE+FDP +G KLS
Sbjct: 170 LCKGRQSRERITGNYRRLVLSIANRYRGKGLSLQDLIQEGSIGLLRGAERFDPKRGNKLS 229
Query: 825 TYVYWWIKQAIIRAVANKSRLIRLPVSMCEMVAKVAEANNVLNRRLGRQPTCEEIANMVD 1004
TYVYWWIK+AII +++ SR++R P S+ + K+AEA L RLGR P+ EIA ++
Sbjct: 230 TYVYWWIKEAIITSISINSRIVRQPRSLWDRTTKIAEAKISLTERLGRLPSYREIAKELN 289
Query: 1005 VSVSGVRLLCERSRPPISLDRTFADQGSMTLQEIILGPEETRPETMVNKKLMKQEAEQLL 1184
V VS VRL+ RSR +SLD+ +DQG MTLQEII GPEE PE MV K+L+K+E E+L+
Sbjct: 290 VHVSTVRLVFSRSRSTVSLDQAVSDQGGMTLQEIIPGPEEMMPENMVKKQLLKKELEELI 349
Query: 1185 TTLSEREAIILRLYFGFDGEITRSFEEIGRLLNLSRER 1298
TL +REA LRL FG +G+ +S +EIGR L L RER
Sbjct: 350 QTLGKREAHTLRLIFGLNGQTPQSCDEIGRSLKLCRER 387
>ref|XP_004499937.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Cicer arietinum]
Length = 407
Score = 302 bits (773), Expect = 3e-79
Identities = 163/322 (50%), Positives = 224/322 (69%), Gaps = 6/322 (1%)
Frame = +3
Query: 429 KGKDCIEQQWTVRPSSS------AYLTRCEEVEFSLYIKEGARLEEARKRLWDTRESEPT 590
K C+ ++ ++ + S +L+ EE E L +KEGAR+E ++ R+ + +
Sbjct: 90 KNLGCVVEEENIQNNFSREKELVGFLSSIEEAEICLGLKEGARIEVSKHRMTEHEGNSSI 149
Query: 591 SSEWADLVGIKRRNLEKTLCRARESRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSV 770
S A +L+K L RES+ER+ YR LVASIA YQG+GL+ +DL QEG++
Sbjct: 150 SRRLAH----GNTSLDKVLSNTRESKERLAHEYRGLVASIAARYQGKGLSFQDLTQEGTI 205
Query: 771 GLLRGAEKFDPAKGYKLSTYVYWWIKQAIIRAVANKSRLIRLPVSMCEMVAKVAEANNVL 950
GLL GAEKFDP +G KLSTYVYWWIKQAI++A+A KSRL+RLP MV K+AEA NVL
Sbjct: 206 GLLHGAEKFDPNRGCKLSTYVYWWIKQAILKALARKSRLVRLPGEKYGMVGKIAEAKNVL 265
Query: 951 NRRLGRQPTCEEIANMVDVSVSGVRLLCERSRPPISLDRTFADQGSMTLQEIILGPEETR 1130
++RL R+PT E+A +++V+VS V+L+ ERSR PISLD+ DQG++TL+EI+ GP E
Sbjct: 266 SKRLRRKPTYNEMAEVLNVNVSIVKLVSERSRQPISLDKAVFDQGNLTLKEIMPGPVEMI 325
Query: 1131 PETMVNKKLMKQEAEQLLTTLSEREAIILRLYFGFDGEITRSFEEIGRLLNLSRERVRQI 1310
PE MV ++L KQ +LL TL++REA ILRLYFG +GE SFEEIG+ L LSRER+RQI
Sbjct: 326 PEKMVERQLKKQGVVKLLNTLNKREAEILRLYFGLNGETPLSFEEIGKQLKLSRERIRQI 385
Query: 1311 HYIALTKLRKISAANDLRVYMM 1376
H IAL+KL++ + + L+ Y++
Sbjct: 386 HGIALSKLQQTTLVDSLKFYVV 407
>ref|XP_007148895.1| hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris]
gi|561022159|gb|ESW20889.1| hypothetical protein
PHAVU_005G023100g [Phaseolus vulgaris]
Length = 367
Score = 301 bits (771), Expect = 5e-79
Identities = 163/311 (52%), Positives = 220/311 (70%), Gaps = 11/311 (3%)
Frame = +3
Query: 477 SAYLTRCEEVEFSLYIKEGARLEEARKRLWDTRESEPTSSEWADLV--GIKRRN------ 632
S YL+ EE E L ++ + + T + + SE A L+ G++ +
Sbjct: 64 SWYLSSREEAELCLDLRVSSDKTQ-------TPQQQGAKSEVAKLITKGLEEHSAIPIMS 116
Query: 633 ---LEKTLCRARESRERINLSYRRLVASIATAYQGRGLNLEDLIQEGSVGLLRGAEKFDP 803
L+K LC ARES+ER+ YR LV SIA Y G+GL+L+DLIQEG+VGLLRGAEKF+P
Sbjct: 117 LLSLDKALCNARESKERLANDYRGLVTSIAAGYLGKGLSLQDLIQEGTVGLLRGAEKFEP 176
Query: 804 AKGYKLSTYVYWWIKQAIIRAVANKSRLIRLPVSMCEMVAKVAEANNVLNRRLGRQPTCE 983
+GYKLSTYVYWWIKQA+I+A+A KSRL+RLP EMVAKVA+ANN+L+ RL R+PT +
Sbjct: 177 ERGYKLSTYVYWWIKQAMIKAIARKSRLVRLPSGKSEMVAKVAQANNILSSRLRRKPTYD 236
Query: 984 EIANMVDVSVSGVRLLCERSRPPISLDRTFADQGSMTLQEIILGPEETRPETMVNKKLMK 1163
E A +++V S +RL+ E+SR PISLD+ D G MTLQEII GPE+ PE MV ++LMK
Sbjct: 237 ETAEVLNVKASTIRLVSEKSRKPISLDKVVTDCGHMTLQEIIPGPEDMTPEKMVKRQLMK 296
Query: 1164 QEAEQLLTTLSEREAIILRLYFGFDGEITRSFEEIGRLLNLSRERVRQIHYIALTKLRKI 1343
QE +LL TLS+REA I+ LY+G +GE +F+EIG ++ LSRER+RQI+ IAL+KLR+
Sbjct: 297 QEVMKLLNTLSKREAEIVTLYYGLNGETPLTFKEIGGMMQLSRERIRQINGIALSKLRQT 356
Query: 1344 SAANDLRVYMM 1376
S ++L+ Y++
Sbjct: 357 SIIDNLKFYLV 367