BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00005174
         (778 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHM26620.1| ribulose-1,5-bisphosphate carboxylase/oxygenase a...   353   5e-95
ref|XP_003632187.1| PREDICTED: ribulose bisphosphate carboxylase...   348   2e-93
ref|XP_002532996.1| Ribulose bisphosphate carboxylase/oxygenase ...   348   2e-93
ref|XP_002282236.1| PREDICTED: ribulose bisphosphate carboxylase...   348   2e-93
emb|CAN83893.1| hypothetical protein VITISV_039112 [Vitis vinifera]   348   2e-93
ref|XP_007220990.1| hypothetical protein PRUPE_ppa005158mg [Prun...   345   8e-93
ref|XP_007220989.1| hypothetical protein PRUPE_ppa005158mg [Prun...   345   8e-93
ref|XP_004307478.1| PREDICTED: ribulose bisphosphate carboxylase...   342   7e-92
ref|XP_002270571.2| PREDICTED: ribulose bisphosphate carboxylase...   342   9e-92
emb|CBI31641.3| unnamed protein product [Vitis vinifera]              341   2e-91
ref|XP_002282979.1| PREDICTED: ribulose bisphosphate carboxylase...   341   2e-91
sp|Q40281.1|RCA_MALDO RecName: Full=Ribulose bisphosphate carbox...   338   1e-90
gb|ADN34076.1| ribulose bisphosphate carboxylase/oxygenase activ...   333   5e-89
gb|AHC95483.1| ribulose bisphosphate carboxylase/oxygenase activ...   332   9e-89
ref|XP_007009268.1| Rubisco activase isoform 2 [Theobroma cacao]...   332   9e-89
ref|XP_007009267.1| Ribulose bisphosphate carboxylase/oxygenase ...   332   9e-89
gb|EXC10712.1| Ribulose bisphosphate carboxylase/oxygenase activ...   329   8e-88
ref|XP_006480857.1| PREDICTED: ribulose bisphosphate carboxylase...   328   1e-87
ref|XP_004138462.1| PREDICTED: ribulose bisphosphate carboxylase...   328   1e-87
gb|ABK96359.1| unknown [Populus trichocarpa x Populus deltoides]      327   2e-87

>gb|AHM26620.1| ribulose-1,5-bisphosphate carboxylase/oxygenase activase protein,
           partial [Pyrus x bretschneideri]
          Length = 333

 Score =  353 bits (905), Expect = 5e-95
 Identities = 186/255 (72%), Positives = 200/255 (78%), Gaps = 4/255 (1%)
 Frame = -1

Query: 754 SKPSHSQSHGQLAHSL----SVLLQNLDRSQPSNSMATAVSTAGAVNRVXXXXXXXXXXX 587
           S P  +Q H  LA +     SV       S P   MATAVST G+VNR            
Sbjct: 42  SFPLKTQQHTVLAGNQECPPSVTHTRTQPSDPREIMATAVSTIGSVNRAPLNLNGSSSSA 101

Query: 586 XXXXXAFLGSSLKKVNSGFIHPKVASRSLKIVAEVDEEKQTNKDKWKGLAYDISDDQQDI 407
                 FLGSSLKKVNS F + KV+S SL+IVA VDE+KQT+KDKWKGLA+D SDDQQDI
Sbjct: 102 LVPISTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDKWKGLAFDTSDDQQDI 161

Query: 406 TRGKGMVDSLFQAPLGTGTHDAVLTSYEYISQGLRQYNLDNMKDGYYIAPAFMDKLVVHI 227
           TRGKGMVDSLFQAP GTGTH A+++SYEYIS GLRQYN DN  DGYYIAPAFMDKLVVHI
Sbjct: 162 TRGKGMVDSLFQAPQGTGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHI 221

Query: 226 TKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKL 47
           TKNFM LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI+PIMMSAGELESGNAGEPAKL
Sbjct: 222 TKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGEPAKL 281

Query: 46  IRQRYREAADIIKKG 2
           IRQRYREAADII+KG
Sbjct: 282 IRQRYREAADIIRKG 296


>ref|XP_003632187.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 2,
           chloroplastic isoform 2 [Vitis vinifera]
          Length = 440

 Score =  348 bits (892), Expect = 2e-93
 Identities = 173/220 (78%), Positives = 188/220 (85%)
 Frame = -1

Query: 661 MATAVSTAGAVNRVXXXXXXXXXXXXXXXXAFLGSSLKKVNSGFIHPKVASRSLKIVAEV 482
           MAT VST GAVNR                 AF GSSLKKV+S F HPK+AS S K+VAE+
Sbjct: 1   MATTVSTIGAVNRTPLSLNSSGTGASVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEI 60

Query: 481 DEEKQTNKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPLGTGTHDAVLTSYEYISQGLR 302
           DE +QT KD+WKGLAYD+SDDQQDITRGKGMVDSLFQAP+ +GTH AV++SYEY+S GLR
Sbjct: 61  DENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLR 120

Query: 301 QYNLDNMKDGYYIAPAFMDKLVVHITKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFA 122
           QYNLDN  DG+YIAPAFMDKLVVHITKNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+
Sbjct: 121 QYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFS 180

Query: 121 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 2
           KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KG
Sbjct: 181 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKG 220


>ref|XP_002532996.1| Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast
           precursor, putative [Ricinus communis]
           gi|223527225|gb|EEF29388.1| Ribulose bisphosphate
           carboxylase/oxygenase activase 1, chloroplast precursor,
           putative [Ricinus communis]
          Length = 474

 Score =  348 bits (892), Expect = 2e-93
 Identities = 174/220 (79%), Positives = 190/220 (86%)
 Frame = -1

Query: 661 MATAVSTAGAVNRVXXXXXXXXXXXXXXXXAFLGSSLKKVNSGFIHPKVASRSLKIVAEV 482
           MA AVS+ GAVNRV                AF GSSLKKVNS  IH K+ S +LK+ AE 
Sbjct: 1   MAAAVSSIGAVNRVPLNLNGADAGPSVPSTAFFGSSLKKVNSKIIHQKILSGNLKVSAEY 60

Query: 481 DEEKQTNKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPLGTGTHDAVLTSYEYISQGLR 302
           DE+KQT+KD+W GLAYDISDDQQDITRGKGMVDSLFQAP+GTGTH AV++SY+Y+SQGLR
Sbjct: 61  DEQKQTDKDRWGGLAYDISDDQQDITRGKGMVDSLFQAPMGTGTHYAVMSSYDYLSQGLR 120

Query: 301 QYNLDNMKDGYYIAPAFMDKLVVHITKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFA 122
           QYNLDN  DG+YIAPAFMDK+VVHITKNF+NLPNIKVPLILGIWGGKGQGKSFQCELVFA
Sbjct: 121 QYNLDNNMDGFYIAPAFMDKVVVHITKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFA 180

Query: 121 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 2
           KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KG
Sbjct: 181 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKG 220


>ref|XP_002282236.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 2,
           chloroplastic isoform 1 [Vitis vinifera]
           gi|297746032|emb|CBI16088.3| unnamed protein product
           [Vitis vinifera]
          Length = 472

 Score =  348 bits (892), Expect = 2e-93
 Identities = 173/220 (78%), Positives = 188/220 (85%)
 Frame = -1

Query: 661 MATAVSTAGAVNRVXXXXXXXXXXXXXXXXAFLGSSLKKVNSGFIHPKVASRSLKIVAEV 482
           MAT VST GAVNR                 AF GSSLKKV+S F HPK+AS S K+VAE+
Sbjct: 1   MATTVSTIGAVNRTPLSLNSSGTGASVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEI 60

Query: 481 DEEKQTNKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPLGTGTHDAVLTSYEYISQGLR 302
           DE +QT KD+WKGLAYD+SDDQQDITRGKGMVDSLFQAP+ +GTH AV++SYEY+S GLR
Sbjct: 61  DENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLR 120

Query: 301 QYNLDNMKDGYYIAPAFMDKLVVHITKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFA 122
           QYNLDN  DG+YIAPAFMDKLVVHITKNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+
Sbjct: 121 QYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFS 180

Query: 121 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 2
           KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KG
Sbjct: 181 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKG 220


>emb|CAN83893.1| hypothetical protein VITISV_039112 [Vitis vinifera]
          Length = 472

 Score =  348 bits (892), Expect = 2e-93
 Identities = 174/220 (79%), Positives = 189/220 (85%)
 Frame = -1

Query: 661 MATAVSTAGAVNRVXXXXXXXXXXXXXXXXAFLGSSLKKVNSGFIHPKVASRSLKIVAEV 482
           MAT VST GAVNR                 AF GSSLKKV+S F HPK+AS S K+VAE+
Sbjct: 1   MATTVSTIGAVNRTPLSLNSSGTGXSVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEI 60

Query: 481 DEEKQTNKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPLGTGTHDAVLTSYEYISQGLR 302
           DE +QT KD+WKGLAYD+SDDQQDITRGKGMVDSLFQAP+ +GTH AV++SYEY+S GLR
Sbjct: 61  DENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLR 120

Query: 301 QYNLDNMKDGYYIAPAFMDKLVVHITKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFA 122
           QYNLDN  DG+YIAPAFMDKLVVHITKNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+
Sbjct: 121 QYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFS 180

Query: 121 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 2
           KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KG
Sbjct: 181 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKG 220


>ref|XP_007220990.1| hypothetical protein PRUPE_ppa005158mg [Prunus persica]
           gi|462417452|gb|EMJ22189.1| hypothetical protein
           PRUPE_ppa005158mg [Prunus persica]
          Length = 474

 Score =  345 bits (886), Expect = 8e-93
 Identities = 176/220 (80%), Positives = 187/220 (85%)
 Frame = -1

Query: 661 MATAVSTAGAVNRVXXXXXXXXXXXXXXXXAFLGSSLKKVNSGFIHPKVASRSLKIVAEV 482
           MATAVST GAVNR                  FLGSSLKKVNS F + KV+S S +IVAEV
Sbjct: 1   MATAVSTIGAVNRAPLSLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSFRIVAEV 60

Query: 481 DEEKQTNKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPLGTGTHDAVLTSYEYISQGLR 302
           DE+KQT+KDKW+GLAYD SDDQQDITRGKGMVDSLFQAP   GTH AV++SYEYIS GLR
Sbjct: 61  DEDKQTDKDKWRGLAYDTSDDQQDITRGKGMVDSLFQAPQDAGTHFAVMSSYEYISTGLR 120

Query: 301 QYNLDNMKDGYYIAPAFMDKLVVHITKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFA 122
           QYNLDN  DG+YIAPAFMDKLVVHITKNFM LPNIKVPLILGIWGGKGQGKSFQCELVFA
Sbjct: 121 QYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFA 180

Query: 121 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 2
           KMGI+PIMMSAGELESGNAGEPAKLIRQRYREAADII+KG
Sbjct: 181 KMGISPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKG 220


>ref|XP_007220989.1| hypothetical protein PRUPE_ppa005158mg [Prunus persica]
           gi|462417451|gb|EMJ22188.1| hypothetical protein
           PRUPE_ppa005158mg [Prunus persica]
          Length = 437

 Score =  345 bits (886), Expect = 8e-93
 Identities = 176/220 (80%), Positives = 187/220 (85%)
 Frame = -1

Query: 661 MATAVSTAGAVNRVXXXXXXXXXXXXXXXXAFLGSSLKKVNSGFIHPKVASRSLKIVAEV 482
           MATAVST GAVNR                  FLGSSLKKVNS F + KV+S S +IVAEV
Sbjct: 1   MATAVSTIGAVNRAPLSLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSFRIVAEV 60

Query: 481 DEEKQTNKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPLGTGTHDAVLTSYEYISQGLR 302
           DE+KQT+KDKW+GLAYD SDDQQDITRGKGMVDSLFQAP   GTH AV++SYEYIS GLR
Sbjct: 61  DEDKQTDKDKWRGLAYDTSDDQQDITRGKGMVDSLFQAPQDAGTHFAVMSSYEYISTGLR 120

Query: 301 QYNLDNMKDGYYIAPAFMDKLVVHITKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFA 122
           QYNLDN  DG+YIAPAFMDKLVVHITKNFM LPNIKVPLILGIWGGKGQGKSFQCELVFA
Sbjct: 121 QYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFA 180

Query: 121 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 2
           KMGI+PIMMSAGELESGNAGEPAKLIRQRYREAADII+KG
Sbjct: 181 KMGISPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKG 220


>ref|XP_004307478.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 477

 Score =  342 bits (878), Expect = 7e-92
 Identities = 173/223 (77%), Positives = 190/223 (85%), Gaps = 3/223 (1%)
 Frame = -1

Query: 661 MATAVSTAGAVNRVXXXXXXXXXXXXXXXXAFLGSSLKKVNSGFIHPKVASRSLKIVA-- 488
           MATAVST GAVNR                 +F+GSSLKKVNS F   KV+S S KIVA  
Sbjct: 1   MATAVSTVGAVNRALLSLNGSSGNASVPSSSFMGSSLKKVNSRFPSSKVSSGSFKIVAAE 60

Query: 487 -EVDEEKQTNKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPLGTGTHDAVLTSYEYISQ 311
            E+DE+ QTNKDKWKGLA+D SDDQQDITRGKGMVD+LFQAP+G GTH A+++SY+YIS 
Sbjct: 61  SEIDEDTQTNKDKWKGLAFDESDDQQDITRGKGMVDTLFQAPMGDGTHMAIMSSYDYIST 120

Query: 310 GLRQYNLDNMKDGYYIAPAFMDKLVVHITKNFMNLPNIKVPLILGIWGGKGQGKSFQCEL 131
           GLR YN+DNMKDG+YIAPAFMDKLVVHITKNFMNLPNIK+PLILGIWGGKGQGKSFQCEL
Sbjct: 121 GLRTYNMDNMKDGFYIAPAFMDKLVVHITKNFMNLPNIKIPLILGIWGGKGQGKSFQCEL 180

Query: 130 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 2
           VFAKMGI+PIMMSAGELESGNAGEPAKLIRQRYREAADII+KG
Sbjct: 181 VFAKMGISPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKG 223


>ref|XP_002270571.2| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplastic-like [Vitis vinifera]
           gi|297740331|emb|CBI30513.3| unnamed protein product
           [Vitis vinifera]
          Length = 474

 Score =  342 bits (877), Expect = 9e-92
 Identities = 171/220 (77%), Positives = 187/220 (85%)
 Frame = -1

Query: 661 MATAVSTAGAVNRVXXXXXXXXXXXXXXXXAFLGSSLKKVNSGFIHPKVASRSLKIVAEV 482
           MA  +ST GAVNR                 AFLG+SLKKV+S   HP+ +S + K+VAEV
Sbjct: 1   MAATISTLGAVNRAPLNLNGSGTGASVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVAEV 60

Query: 481 DEEKQTNKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPLGTGTHDAVLTSYEYISQGLR 302
           DEEKQT+KDKWKGLA+D SDDQQDITRGKGMVDSLFQAP+ +GTH AV++SY+YIS GLR
Sbjct: 61  DEEKQTSKDKWKGLAFDESDDQQDITRGKGMVDSLFQAPMDSGTHYAVMSSYDYISTGLR 120

Query: 301 QYNLDNMKDGYYIAPAFMDKLVVHITKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFA 122
           QYNLDN  DG+YIAPAFMDKLVVHITKNFM LPNIKVPLILGIWGGKGQGKSFQCELVFA
Sbjct: 121 QYNLDNTMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFA 180

Query: 121 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 2
           KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KG
Sbjct: 181 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKG 220


>emb|CBI31641.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score =  341 bits (875), Expect = 2e-91
 Identities = 175/221 (79%), Positives = 187/221 (84%), Gaps = 1/221 (0%)
 Frame = -1

Query: 661 MATAVSTAGAVNR-VXXXXXXXXXXXXXXXXAFLGSSLKKVNSGFIHPKVASRSLKIVAE 485
           MATAVST GAVNR +                AFLGSSLKKVNS F H KV+S S K+VAE
Sbjct: 1   MATAVSTVGAVNRALLSLNGASGAGASVPSSAFLGSSLKKVNSRFTHSKVSSGSFKVVAE 60

Query: 484 VDEEKQTNKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPLGTGTHDAVLTSYEYISQGL 305
           VD++ QT KDKWKGLA+D SDDQQDI RGKGMVDSLFQAP+  GTH AV++SYEYIS GL
Sbjct: 61  VDDDMQTEKDKWKGLAFDTSDDQQDIVRGKGMVDSLFQAPMDAGTHYAVMSSYEYISTGL 120

Query: 304 RQYNLDNMKDGYYIAPAFMDKLVVHITKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF 125
           RQYNLDN  DG+YIAPAFMDKLVVHITKNFM LPNIKVPLILGIWGGKGQGKSFQCELVF
Sbjct: 121 RQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVF 180

Query: 124 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 2
           +KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KG
Sbjct: 181 SKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKG 221


>ref|XP_002282979.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic [Vitis vinifera]
          Length = 438

 Score =  341 bits (875), Expect = 2e-91
 Identities = 175/221 (79%), Positives = 187/221 (84%), Gaps = 1/221 (0%)
 Frame = -1

Query: 661 MATAVSTAGAVNR-VXXXXXXXXXXXXXXXXAFLGSSLKKVNSGFIHPKVASRSLKIVAE 485
           MATAVST GAVNR +                AFLGSSLKKVNS F H KV+S S K+VAE
Sbjct: 1   MATAVSTVGAVNRALLSLNGASGAGASVPSSAFLGSSLKKVNSRFTHSKVSSGSFKVVAE 60

Query: 484 VDEEKQTNKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPLGTGTHDAVLTSYEYISQGL 305
           VD++ QT KDKWKGLA+D SDDQQDI RGKGMVDSLFQAP+  GTH AV++SYEYIS GL
Sbjct: 61  VDDDMQTEKDKWKGLAFDTSDDQQDIVRGKGMVDSLFQAPMDAGTHYAVMSSYEYISTGL 120

Query: 304 RQYNLDNMKDGYYIAPAFMDKLVVHITKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF 125
           RQYNLDN  DG+YIAPAFMDKLVVHITKNFM LPNIKVPLILGIWGGKGQGKSFQCELVF
Sbjct: 121 RQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVF 180

Query: 124 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 2
           +KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KG
Sbjct: 181 SKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKG 221


>sp|Q40281.1|RCA_MALDO RecName: Full=Ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic; Short=RA; Short=RuBisCO activase; Flags:
           Precursor gi|415852|emb|CAA79857.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase activase
           [Malus domestica]
          Length = 437

 Score =  338 bits (868), Expect = 1e-90
 Identities = 171/220 (77%), Positives = 186/220 (84%)
 Frame = -1

Query: 661 MATAVSTAGAVNRVXXXXXXXXXXXXXXXXAFLGSSLKKVNSGFIHPKVASRSLKIVAEV 482
           MATAVST G+VNR                  FLGSSLKKVNS F + KV+S SL+IVA V
Sbjct: 1   MATAVSTIGSVNRAPPNLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASV 60

Query: 481 DEEKQTNKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPLGTGTHDAVLTSYEYISQGLR 302
           DE+KQT+KD+WKGLA+D SDDQQDITRGKG VDSLFQAP G+GTH A+++SYEYIS GLR
Sbjct: 61  DEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLR 120

Query: 301 QYNLDNMKDGYYIAPAFMDKLVVHITKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFA 122
           QYN DN  DGYYIAPAFMDKLVVHITKNFM LPN+KVPLILGIWGGKGQGKSFQCELVFA
Sbjct: 121 QYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFA 180

Query: 121 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 2
           KM I+PIMMSAGELESGNAGEPAKLIRQRYREAADII+KG
Sbjct: 181 KMRISPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKG 220


>gb|ADN34076.1| ribulose bisphosphate carboxylase/oxygenase activase 1 [Cucumis
           melo subsp. melo]
          Length = 474

 Score =  333 bits (853), Expect = 5e-89
 Identities = 171/220 (77%), Positives = 185/220 (84%), Gaps = 4/220 (1%)
 Frame = -1

Query: 649 VSTAGAVNRVXXXXXXXXXXXXXXXXAFLGSSLKKVNSGFIHPKVAS-RSLKIVA---EV 482
           ++TAGAVNR+                 FLGS+LKK N  F + KV+S  S K+VA   E+
Sbjct: 1   MATAGAVNRIPLSLNGAIAGPSVQSSTFLGSNLKKANFRFPNSKVSSGSSFKVVAVAEEI 60

Query: 481 DEEKQTNKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPLGTGTHDAVLTSYEYISQGLR 302
           DE+KQTNKDKWKGLA+DISDDQQDITRGKGMVDSLFQAP G GTHD VL+SYEY+S GLR
Sbjct: 61  DEKKQTNKDKWKGLAFDISDDQQDITRGKGMVDSLFQAPTGAGTHDPVLSSYEYLSAGLR 120

Query: 301 QYNLDNMKDGYYIAPAFMDKLVVHITKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFA 122
           QYNLDN  +G+YIAPAFMDKLVVHITKNFM LPNIKVPLILGIWGGKGQGKSFQCELVFA
Sbjct: 121 QYNLDNDVEGFYIAPAFMDKLVVHITKNFMKLPNIKVPLILGIWGGKGQGKSFQCELVFA 180

Query: 121 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 2
           KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG
Sbjct: 181 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 220


>gb|AHC95483.1| ribulose bisphosphate carboxylase/oxygenase activase 1 [Ziziphus
           jujuba]
          Length = 471

 Score =  332 bits (851), Expect = 9e-89
 Identities = 168/220 (76%), Positives = 184/220 (83%)
 Frame = -1

Query: 661 MATAVSTAGAVNRVXXXXXXXXXXXXXXXXAFLGSSLKKVNSGFIHPKVASRSLKIVAEV 482
           MA  +ST G VNR                 AF GSSLKKV S F + K+AS +LK+ AE 
Sbjct: 1   MAATISTVGTVNRTPLSLNSSVSGVSVPSSAFFGSSLKKVGSRFNYQKIASGNLKVAAEY 60

Query: 481 DEEKQTNKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPLGTGTHDAVLTSYEYISQGLR 302
           DEEKQTNKD+W+GLAYDISDDQQDITRGKGMVD+LFQAP+ +GTH AV++SYEY+S GLR
Sbjct: 61  DEEKQTNKDRWQGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYEYLSTGLR 120

Query: 301 QYNLDNMKDGYYIAPAFMDKLVVHITKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFA 122
           QY +DN  DG+YIAPAFMDKLVVHITKNF+ LPNIKVPLILGIWGGKGQGKSFQCELVFA
Sbjct: 121 QY-MDNNMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVFA 179

Query: 121 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 2
           KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG
Sbjct: 180 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 219


>ref|XP_007009268.1| Rubisco activase isoform 2 [Theobroma cacao]
           gi|508726181|gb|EOY18078.1| Rubisco activase isoform 2
           [Theobroma cacao]
          Length = 476

 Score =  332 bits (851), Expect = 9e-89
 Identities = 172/223 (77%), Positives = 185/223 (82%), Gaps = 3/223 (1%)
 Frame = -1

Query: 661 MATAVSTAGAVNRVXXXXXXXXXXXXXXXXAFLGSSLKKVNSGFIHPKVASRSLKIVAEV 482
           MA AVST GAVNR                 AFLGSSLKKV+S F + K+ S S K+VA  
Sbjct: 1   MAAAVSTIGAVNRAPLSLNGSGAGAAVPSSAFLGSSLKKVSSRFSNSKLPSVSFKVVAST 60

Query: 481 ---DEEKQTNKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPLGTGTHDAVLTSYEYISQ 311
              DEEKQT+KDKW+GLAYD SDDQQDITRGKGMVDSLFQAP+  GTH AV++SYEY+SQ
Sbjct: 61  ESTDEEKQTDKDKWRGLAYDESDDQQDITRGKGMVDSLFQAPMNDGTHYAVMSSYEYLSQ 120

Query: 310 GLRQYNLDNMKDGYYIAPAFMDKLVVHITKNFMNLPNIKVPLILGIWGGKGQGKSFQCEL 131
           GLR YNLDN  DG+YIAPAFMDKLVVHI+KNFM LPNIKVPLILGIWGGKGQGKSFQCEL
Sbjct: 121 GLRTYNLDNNVDGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 180

Query: 130 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 2
           VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KG
Sbjct: 181 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKG 223


>ref|XP_007009267.1| Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           isoform 1 [Theobroma cacao] gi|508726180|gb|EOY18077.1|
           Ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic isoform 1 [Theobroma cacao]
          Length = 440

 Score =  332 bits (851), Expect = 9e-89
 Identities = 172/223 (77%), Positives = 185/223 (82%), Gaps = 3/223 (1%)
 Frame = -1

Query: 661 MATAVSTAGAVNRVXXXXXXXXXXXXXXXXAFLGSSLKKVNSGFIHPKVASRSLKIVAEV 482
           MA AVST GAVNR                 AFLGSSLKKV+S F + K+ S S K+VA  
Sbjct: 1   MAAAVSTIGAVNRAPLSLNGSGAGAAVPSSAFLGSSLKKVSSRFSNSKLPSVSFKVVAST 60

Query: 481 ---DEEKQTNKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPLGTGTHDAVLTSYEYISQ 311
              DEEKQT+KDKW+GLAYD SDDQQDITRGKGMVDSLFQAP+  GTH AV++SYEY+SQ
Sbjct: 61  ESTDEEKQTDKDKWRGLAYDESDDQQDITRGKGMVDSLFQAPMNDGTHYAVMSSYEYLSQ 120

Query: 310 GLRQYNLDNMKDGYYIAPAFMDKLVVHITKNFMNLPNIKVPLILGIWGGKGQGKSFQCEL 131
           GLR YNLDN  DG+YIAPAFMDKLVVHI+KNFM LPNIKVPLILGIWGGKGQGKSFQCEL
Sbjct: 121 GLRTYNLDNNVDGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 180

Query: 130 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 2
           VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KG
Sbjct: 181 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKG 223


>gb|EXC10712.1| Ribulose bisphosphate carboxylase/oxygenase activase 1 [Morus
           notabilis]
          Length = 475

 Score =  329 bits (843), Expect = 8e-88
 Identities = 170/223 (76%), Positives = 183/223 (82%), Gaps = 3/223 (1%)
 Frame = -1

Query: 661 MATAVSTAGAVNRVXXXXXXXXXXXXXXXXA-FLGSSLKKVNS--GFIHPKVASRSLKIV 491
           MA+AVST G VN                  + F G SLKK+ S      P++ S SL++V
Sbjct: 1   MASAVSTVGTVNGTPLGLNSSGTGGNSVSSSAFFGGSLKKIISQRSPSFPRIGSGSLRVV 60

Query: 490 AEVDEEKQTNKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPLGTGTHDAVLTSYEYISQ 311
           AE+DEEKQT KDKWKGLAYD+SDDQQDITRGKGMVDSLFQAP GTGTH AV++SYEYIS 
Sbjct: 61  AELDEEKQTKKDKWKGLAYDVSDDQQDITRGKGMVDSLFQAPTGTGTHHAVMSSYEYISA 120

Query: 310 GLRQYNLDNMKDGYYIAPAFMDKLVVHITKNFMNLPNIKVPLILGIWGGKGQGKSFQCEL 131
           GLRQYNLDN  DG YIAPAFMDKLVVHITKNFM+LPNIKVPLILGIWGGKGQGKSFQCEL
Sbjct: 121 GLRQYNLDNNMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCEL 180

Query: 130 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 2
           VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYRE ADII+KG
Sbjct: 181 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREGADIIRKG 223


>ref|XP_006480857.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplastic-like [Citrus sinensis]
          Length = 475

 Score =  328 bits (841), Expect = 1e-87
 Identities = 165/221 (74%), Positives = 185/221 (83%), Gaps = 1/221 (0%)
 Frame = -1

Query: 661 MATAVSTAGAVNR-VXXXXXXXXXXXXXXXXAFLGSSLKKVNSGFIHPKVASRSLKIVAE 485
           MAT VST GAVN  +                 FLG SLKKV+S     ++ S+S K+V+E
Sbjct: 1   MATVVSTVGAVNNALPLKINGSSRFSLVPSSVFLGKSLKKVSSKVSQQRILSKSFKVVSE 60

Query: 484 VDEEKQTNKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPLGTGTHDAVLTSYEYISQGL 305
            DEEKQT++D+W GLAYDISDDQQDITRGKGMVD+LFQAP+ +GTH AV++SY+YISQGL
Sbjct: 61  YDEEKQTSQDRWAGLAYDISDDQQDITRGKGMVDTLFQAPMESGTHYAVMSSYDYISQGL 120

Query: 304 RQYNLDNMKDGYYIAPAFMDKLVVHITKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF 125
           RQY+LDN  DG YIAPAFMDK+VVHITKNF+NLPN+KVPLILGIWGGKGQGKSFQCELVF
Sbjct: 121 RQYSLDNTLDGLYIAPAFMDKVVVHITKNFLNLPNVKVPLILGIWGGKGQGKSFQCELVF 180

Query: 124 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 2
           AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG
Sbjct: 181 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 221


>ref|XP_004138462.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplastic-like [Cucumis sativus]
          Length = 474

 Score =  328 bits (841), Expect = 1e-87
 Identities = 169/220 (76%), Positives = 184/220 (83%), Gaps = 4/220 (1%)
 Frame = -1

Query: 649 VSTAGAVNRVXXXXXXXXXXXXXXXXAFLGSSLKKVNSGFIHPKVAS-RSLKIVA---EV 482
           ++TAGAVNR+                AFLGSSLKK N  F   KV+S  S K+VA   E+
Sbjct: 1   MATAGAVNRIPLSLNGAIAGPSVQSSAFLGSSLKKANFRFPSSKVSSGSSFKVVAVAEEI 60

Query: 481 DEEKQTNKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPLGTGTHDAVLTSYEYISQGLR 302
           DE+KQT+KDKWKGLA+D+SDDQQDITRGKGMVD+LFQAP G GTHD VL+SYEY+S GLR
Sbjct: 61  DEKKQTSKDKWKGLAFDVSDDQQDITRGKGMVDTLFQAPSGAGTHDPVLSSYEYLSAGLR 120

Query: 301 QYNLDNMKDGYYIAPAFMDKLVVHITKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFA 122
           QYN DN  DG+YIAPAFMDKLVVHI+KNFM LPNIKVPLILGIWGGKGQGKSFQCELVFA
Sbjct: 121 QYNFDNNVDGFYIAPAFMDKLVVHISKNFMKLPNIKVPLILGIWGGKGQGKSFQCELVFA 180

Query: 121 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 2
           KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG
Sbjct: 181 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKG 220


>gb|ABK96359.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 476

 Score =  327 bits (839), Expect = 2e-87
 Identities = 166/220 (75%), Positives = 183/220 (83%), Gaps = 1/220 (0%)
 Frame = -1

Query: 661 MATAVSTAGAVNRVXXXXXXXXXXXXXXXXAFLGSSLKKVNSG-FIHPKVASRSLKIVAE 485
           MA  +ST GAVN                  AF G+SLKKV+S  F + K++S S K+VAE
Sbjct: 1   MAATISTVGAVNTAPLALNGSGAGSTVPNSAFFGNSLKKVSSSRFTNSKISSGSFKVVAE 60

Query: 484 VDEEKQTNKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPLGTGTHDAVLTSYEYISQGL 305
            DE+KQT+KD+W GL  D+SDDQQDITRGKGMVDSLFQAP GTGTH+ +L+SYEY+SQGL
Sbjct: 61  YDEKKQTDKDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGTHNPILSSYEYLSQGL 120

Query: 304 RQYNLDNMKDGYYIAPAFMDKLVVHITKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF 125
           R YNLDN  DGYYIAPAFMDKLVVHI+KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVF
Sbjct: 121 RTYNLDNNMDGYYIAPAFMDKLVVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVF 180

Query: 124 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKK 5
           AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKK
Sbjct: 181 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKK 220