BLASTX nr result

ID: Cocculus23_contig00005093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00005093
         (287 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_563987.1| uncharacterized protein [Arabidopsis thaliana] ...    56   4e-06
ref|XP_006845373.1| hypothetical protein AMTR_s00019p00037770 [A...    56   6e-06
ref|XP_006303475.1| hypothetical protein CARUB_v10010772mg [Caps...    55   8e-06
ref|XP_002263745.1| PREDICTED: uncharacterized protein LOC100262...    55   8e-06
ref|XP_004303234.1| PREDICTED: uncharacterized protein LOC101299...    55   1e-05
ref|XP_002890141.1| hypothetical protein ARALYDRAFT_471799 [Arab...    55   1e-05
ref|XP_002889269.1| predicted protein [Arabidopsis lyrata subsp....    55   1e-05

>ref|NP_563987.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6587807|gb|AAF18498.1|AC010924_11 Identical to
           gb|Y10291 GAG1 protein from Arabidopsis thaliana
           [Arabidopsis thaliana] gi|1780757|emb|CAA71334.1| GAG1At
           [Arabidopsis thaliana] gi|21592597|gb|AAM64546.1|
           unknown [Arabidopsis thaliana]
           gi|26450030|dbj|BAC42135.1| unknown protein [Arabidopsis
           thaliana] gi|28827224|gb|AAO50456.1| unknown protein
           [Arabidopsis thaliana] gi|332191273|gb|AEE29394.1|
           uncharacterized protein AT1G16000 [Arabidopsis thaliana]
          Length = 86

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 22/32 (68%), Positives = 30/32 (93%)
 Frame = -1

Query: 101 FRSRMEYFMYSGDKKHVLIGIGIVSAIFAVPW 6
           FR++ME+++YSG+KKHVL+GIGIV+ IF VPW
Sbjct: 20  FRAKMEHYVYSGEKKHVLVGIGIVTIIFGVPW 51


>ref|XP_006845373.1| hypothetical protein AMTR_s00019p00037770 [Amborella trichopoda]
           gi|548847945|gb|ERN07048.1| hypothetical protein
           AMTR_s00019p00037770 [Amborella trichopoda]
          Length = 74

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 20/33 (60%), Positives = 27/33 (81%)
 Frame = -1

Query: 101 FRSRMEYFMYSGDKKHVLIGIGIVSAIFAVPWI 3
           FRS+MEY++YSGDKKHV  GI I+  +F +PW+
Sbjct: 9   FRSKMEYYLYSGDKKHVFAGIAIIGVVFGIPWV 41


>ref|XP_006303475.1| hypothetical protein CARUB_v10010772mg [Capsella rubella]
           gi|482572186|gb|EOA36373.1| hypothetical protein
           CARUB_v10010772mg [Capsella rubella]
          Length = 86

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 21/32 (65%), Positives = 30/32 (93%)
 Frame = -1

Query: 101 FRSRMEYFMYSGDKKHVLIGIGIVSAIFAVPW 6
           FR++ME+++YSG+KKHV++GIGIV+ IF VPW
Sbjct: 20  FRAKMEHYVYSGEKKHVMVGIGIVTLIFGVPW 51


>ref|XP_002263745.1| PREDICTED: uncharacterized protein LOC100262209 [Vitis vinifera]
          Length = 83

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = -1

Query: 101 FRSRMEYFMYSGDKKHVLIGIGIVSAIFAVPW 6
           FRSRMEY++YSGDKKHVL GI I S  F +PW
Sbjct: 14  FRSRMEYYLYSGDKKHVLAGIAIFSIAFGIPW 45


>ref|XP_004303234.1| PREDICTED: uncharacterized protein LOC101299312 [Fragaria vesca
           subsp. vesca]
          Length = 81

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 21/32 (65%), Positives = 29/32 (90%)
 Frame = -1

Query: 101 FRSRMEYFMYSGDKKHVLIGIGIVSAIFAVPW 6
           FR +ME+++YSGDKKHV+ GI ++SA+FAVPW
Sbjct: 14  FRGKMEHYLYSGDKKHVMAGIVLISAVFAVPW 45


>ref|XP_002890141.1| hypothetical protein ARALYDRAFT_471799 [Arabidopsis lyrata subsp.
           lyrata] gi|297335983|gb|EFH66400.1| hypothetical protein
           ARALYDRAFT_471799 [Arabidopsis lyrata subsp. lyrata]
          Length = 82

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 21/32 (65%), Positives = 30/32 (93%)
 Frame = -1

Query: 101 FRSRMEYFMYSGDKKHVLIGIGIVSAIFAVPW 6
           FR++ME+++YSG++KHVL+GIGIV+ IF VPW
Sbjct: 21  FRAKMEHYVYSGERKHVLVGIGIVTIIFGVPW 52


>ref|XP_002889269.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335110|gb|EFH65528.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 79

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 21/32 (65%), Positives = 29/32 (90%)
 Frame = -1

Query: 101 FRSRMEYFMYSGDKKHVLIGIGIVSAIFAVPW 6
           FR++ME+++YSG+KKHVL GIGI+S IF +PW
Sbjct: 13  FRAKMEHYVYSGEKKHVLAGIGIISIIFGIPW 44


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