BLASTX nr result

ID: Cocculus23_contig00005075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00005075
         (310 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004230885.1| PREDICTED: triosephosphate isomerase, chloro...    55   8e-06

>ref|XP_004230885.1| PREDICTED: triosephosphate isomerase, chloroplastic-like [Solanum
           lycopersicum]
          Length = 326

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 33/68 (48%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
 Frame = +3

Query: 117 MATASTFLASQLPGPKXXXXXXXTHFSGLRRVC--FNNSPS--TNQAFFHKIDSHLTLST 284
           MA AST LASQ+ GPK         FSGLR+     +NS S  T+QAFF  +DSHL +S+
Sbjct: 1   MAVASTSLASQMSGPKSVTSISCPQFSGLRKSLSKLDNSVSFSTSQAFFQNVDSHLRISS 60

Query: 285 PHSPCRGV 308
               CR V
Sbjct: 61  DRKGCRAV 68


Top