BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00005022
         (1874 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Popu...   504   e-161
ref|XP_006467340.1| PREDICTED: transcription initiation factor I...   504   e-158
ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citr...   504   e-158
ref|XP_007211539.1| hypothetical protein PRUPE_ppa003970mg [Prun...   494   e-157
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|...   483   e-156
ref|XP_006857695.1| hypothetical protein AMTR_s00061p00167160 [A...   475   e-155
ref|XP_004250258.1| PREDICTED: transcription initiation factor I...   473   e-150
ref|XP_006352364.1| PREDICTED: transcription initiation factor I...   473   e-150
ref|XP_006352367.1| PREDICTED: transcription initiation factor I...   473   e-150
ref|XP_004152016.1| PREDICTED: transcription initiation factor I...   461   e-146
ref|XP_003594206.1| Transcription initiation factor IIF subunit ...   454   e-145
ref|XP_004486214.1| PREDICTED: transcription initiation factor I...   460   e-145
ref|XP_006586768.1| PREDICTED: transcription initiation factor I...   460   e-145
ref|XP_007147660.1| hypothetical protein PHAVU_006G143600g [Phas...   457   e-145
emb|CBI33123.3| unnamed protein product [Vitis vinifera]              518   e-144
ref|XP_007154011.1| hypothetical protein PHAVU_003G083500g [Phas...   453   e-143
ref|XP_002262798.2| PREDICTED: transcription initiation factor I...   509   e-141
gb|EYU27712.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus...   437   e-140
gb|AAN04997.1| putative transcription initiation factor [Oryza s...   432   e-140
gb|AAX95773.1| putative transcription initiation factor [Oryza s...   432   e-140

>ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
            gi|550335193|gb|ERP58675.1| hypothetical protein
            POPTR_0006s01070g [Populus trichocarpa]
          Length = 536

 Score =  504 bits (1299), Expect(2) = e-161
 Identities = 273/442 (61%), Positives = 295/442 (66%), Gaps = 3/442 (0%)
 Frame = -1

Query: 1610 MSFDLHLKASCSGCGSPNELYGSNCKHMTLCLTCGKTMAEKRGKCYECGVPVTRLIREYN 1431
            MSFDL L+ SCSGCGS  +LYGSNCKHMTLCLTCGKTMAE RGKC++CG  VTRLIREYN
Sbjct: 1    MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYN 60

Query: 1430 VRASSASDKSYFIARFVTGLPNFSKKKNAENKWSLHKEGLQGRHVTDALREKYKNKPWLL 1251
            VRAS++S+K+YFI RFVTGLP FSKKKNAENKWSL KEG+ GR +TD LREK+KNKPWLL
Sbjct: 61   VRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLL 120

Query: 1250 EDETGQSQYHGQLEGAQSATYYLLMMQGKEFVAIPAGSW--YNFNKVAQYKQLTLEEAEE 1077
            EDETGQ QY G LEG+QSATYYLLMM GKEFVAIPAGSW  YNFNKVA YKQLTLEEAEE
Sbjct: 121  EDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQLTLEEAEE 180

Query: 1076 KMKNRKKNADGYERWMMKLANNGAAAFGEVERPDEKDXXXXXXXXXXXXXXXAXXXXXXX 897
            KMKNR+K ADGYERWMMK A+NGAAAFGEVE+PD+KD                       
Sbjct: 181  KMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVS 240

Query: 896  XXXXXXXXXXXXRKNRLRPNKSXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDD 717
                        RK+RL  NK                           DWEHEEIFTDDD
Sbjct: 241  DKGEEDEEEEAGRKSRLGLNKG-GGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDD 299

Query: 716  EAVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXEGGLSTSGKELKKLLGKASGLNXXX 537
            EAV  DPEEREDLAPEVPAPP              EGGLS SGKELKKLLGKA+GLN   
Sbjct: 300  EAVAIDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKELKKLLGKANGLN--- 356

Query: 536  XXXXXXXXXXXXXXXXXSPVLAPKQKD-VPKEEPVDNSPSKAAATGSVRGTPPXXXXXXX 360
                             SPVLAPKQKD VPKEEP DNSP+K    GS +GTP        
Sbjct: 357  ESDAEDDDDDDDMDDDISPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKG 416

Query: 359  XXXSGGDDAKAANGAPSKKXLK 294
                  DDAK +NGAP KK +K
Sbjct: 417  KRKLNADDAKTSNGAPVKKEVK 438



 Score = 93.2 bits (230), Expect(2) = e-161
 Identities = 47/63 (74%), Positives = 55/63 (87%)
 Frame = -3

Query: 201 PVTEDEIRAVLLQMAPVTTQELVGRFKARLKTAEDKGAFAAILQKISKIQKTGGHSYVVL 22
           PVTE+EIRAVLLQ  PVTTQ+LV RFK+RL+T EDK AFA IL++ISKIQKT G ++VVL
Sbjct: 473 PVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVL 532

Query: 21  RDK 13
           RDK
Sbjct: 533 RDK 535


>ref|XP_006467340.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Citrus sinensis]
            gi|568825955|ref|XP_006467341.1| PREDICTED: transcription
            initiation factor IIF subunit alpha-like isoform X2
            [Citrus sinensis]
          Length = 538

 Score =  504 bits (1298), Expect(2) = e-158
 Identities = 271/437 (62%), Positives = 297/437 (67%), Gaps = 1/437 (0%)
 Frame = -1

Query: 1610 MSFDLHLKASCSGCGSPNELYGSNCKHMTLCLTCGKTMAEKRGKCYECGVPVTRLIREYN 1431
            MSFDL LK  CSGCGS  +LYGSNCKHMTLCLTCGKTMAE + KC++CG  VTRLIREYN
Sbjct: 1    MSFDLLLKPQCSGCGSQADLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYN 60

Query: 1430 VRASSASDKSYFIARFVTGLPNFSKKKNAENKWSLHKEGLQGRHVTDALREKYKNKPWLL 1251
            VR S++SDK+YFI RFV+GLP+FSKKKNAENKW+LHK+GLQGR VTD LREKYKNKPW+L
Sbjct: 61   VRPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWML 120

Query: 1250 EDETGQSQYHGQLEGAQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1071
            EDETGQ+QY G LEG+QSATYYLL+M  KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1070 KNRKKNADGYERWMMKLANNGAAAFGEVERPDEKDXXXXXXXXXXXXXXXAXXXXXXXXX 891
            KNR+K ADGYERWMMK ANNGAAAFGEVE+PD+K+                         
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKE-SAGTGGRGRSKKSGDEDEGNVSDR 239

Query: 890  XXXXXXXXXXRKNRLRPNKSXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEA 711
                      RKNRL  NK                           DWEHEEIFTDDDEA
Sbjct: 240  GEEDEDEEAKRKNRLGLNK-RGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEA 298

Query: 710  VGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXEGGLSTSGKELKKLLGKASGLNXXXXX 531
            VGNDPEEREDLAPEVPAPP              EGGLS SGKELKKLLG+A+GLN     
Sbjct: 299  VGNDPEEREDLAPEVPAPP-EIKQDEEDEDEEEEGGLSKSGKELKKLLGRANGLNESDAE 357

Query: 530  XXXXXXXXXXXXXXXSPVLAPKQKDVP-KEEPVDNSPSKAAATGSVRGTPPXXXXXXXXX 354
                           SP+LAPK KD P KEEP DNSP+K A +GS R TP          
Sbjct: 358  DDDDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGRATPSTSKSAKGKR 417

Query: 353  XSGGDDAKAANGAPSKK 303
             S GDDA+A +GAP KK
Sbjct: 418  KSNGDDARAPSGAPLKK 434



 Score = 85.1 bits (209), Expect(2) = e-158
 Identities = 45/64 (70%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
 Frame = -3

Query: 201 PVTEDEIRAVLLQMAPVTTQELVGRFKARLKTAEDKGAFAAILQKISKIQKTGGHS-YVV 25
           PVT +EIRAVLLQ APVTTQ+LV +FK RL++ ED+ AFA IL++ISKIQKT G S YVV
Sbjct: 475 PVTAEEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADILKRISKIQKTNGPSNYVV 534

Query: 24  LRDK 13
           LR+K
Sbjct: 535 LREK 538


>ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
            gi|567915083|ref|XP_006449855.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
            gi|557552465|gb|ESR63094.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
            gi|557552466|gb|ESR63095.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
          Length = 538

 Score =  504 bits (1297), Expect(2) = e-158
 Identities = 271/437 (62%), Positives = 297/437 (67%), Gaps = 1/437 (0%)
 Frame = -1

Query: 1610 MSFDLHLKASCSGCGSPNELYGSNCKHMTLCLTCGKTMAEKRGKCYECGVPVTRLIREYN 1431
            MSFDL LK  CSGCGS  +LYGSNCKHMTLCLTCGKTMAE + KC++CG  VTRLIREYN
Sbjct: 1    MSFDLLLKPQCSGCGSQVDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYN 60

Query: 1430 VRASSASDKSYFIARFVTGLPNFSKKKNAENKWSLHKEGLQGRHVTDALREKYKNKPWLL 1251
            VR S++SDK+YFI RFV+GLP+FSKKKNAENKW+LHK+GLQGR VTD LREKYKNKPW+L
Sbjct: 61   VRPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWML 120

Query: 1250 EDETGQSQYHGQLEGAQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1071
            EDETGQ+QY G LEG+QSATYYLL+M  KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1070 KNRKKNADGYERWMMKLANNGAAAFGEVERPDEKDXXXXXXXXXXXXXXXAXXXXXXXXX 891
            KNR+K ADGYERWMMK ANNGAAAFGEVE+PD+K+                         
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKE-SAGTGGRGRSKKSGDEDEGNVSDR 239

Query: 890  XXXXXXXXXXRKNRLRPNKSXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEA 711
                      RKNRL  NK                           DWEHEEIFTDDDEA
Sbjct: 240  GEEDEDEEAKRKNRLGLNK-RGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEA 298

Query: 710  VGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXEGGLSTSGKELKKLLGKASGLNXXXXX 531
            VGNDPEEREDLAPEVPAPP              EGGLS SGKELKKLLG+A+GLN     
Sbjct: 299  VGNDPEEREDLAPEVPAPP-EIKQDEEDEDEEEEGGLSKSGKELKKLLGRANGLNESDAE 357

Query: 530  XXXXXXXXXXXXXXXSPVLAPKQKDVP-KEEPVDNSPSKAAATGSVRGTPPXXXXXXXXX 354
                           SP+LAPK KD P KEEP DNSP+K A +GS R TP          
Sbjct: 358  DDDDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGRATPSTSKSAKGKR 417

Query: 353  XSGGDDAKAANGAPSKK 303
             S GDDA+A +GAP KK
Sbjct: 418  KSNGDDARAPSGAPLKK 434



 Score = 85.1 bits (209), Expect(2) = e-158
 Identities = 45/64 (70%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
 Frame = -3

Query: 201 PVTEDEIRAVLLQMAPVTTQELVGRFKARLKTAEDKGAFAAILQKISKIQKTGGHS-YVV 25
           PVT +EIRAVLLQ APVTTQ+LV +FK RL++ ED+ AFA IL++ISKIQKT G S YVV
Sbjct: 475 PVTAEEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADILKRISKIQKTNGPSNYVV 534

Query: 24  LRDK 13
           LR+K
Sbjct: 535 LREK 538


>ref|XP_007211539.1| hypothetical protein PRUPE_ppa003970mg [Prunus persica]
            gi|462407404|gb|EMJ12738.1| hypothetical protein
            PRUPE_ppa003970mg [Prunus persica]
          Length = 537

 Score =  494 bits (1272), Expect(2) = e-157
 Identities = 264/436 (60%), Positives = 286/436 (65%)
 Frame = -1

Query: 1610 MSFDLHLKASCSGCGSPNELYGSNCKHMTLCLTCGKTMAEKRGKCYECGVPVTRLIREYN 1431
            MS DL L++SCSGCGS +ELYGSNCKHMTLCL+CGKTMAE R KC++CG  VTRLIREYN
Sbjct: 1    MSADLTLRSSCSGCGSTSELYGSNCKHMTLCLSCGKTMAENRAKCFDCGAIVTRLIREYN 60

Query: 1430 VRASSASDKSYFIARFVTGLPNFSKKKNAENKWSLHKEGLQGRHVTDALREKYKNKPWLL 1251
            VRAS+ +DK+YFI RFVTGLP+FSKKKNAENKWSLHKEGLQGR ++D LR+KYKNKPW+L
Sbjct: 61   VRASTVNDKNYFIGRFVTGLPSFSKKKNAENKWSLHKEGLQGRQLSDTLRDKYKNKPWVL 120

Query: 1250 EDETGQSQYHGQLEGAQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1071
            EDETGQSQY G LEGAQ+ATYYLLM QGKEF AIPAGSW+NFNKVAQYKQLTLEEAEEK+
Sbjct: 121  EDETGQSQYQGHLEGAQTATYYLLMRQGKEFSAIPAGSWFNFNKVAQYKQLTLEEAEEKI 180

Query: 1070 KNRKKNADGYERWMMKLANNGAAAFGEVERPDEKDXXXXXXXXXXXXXXXAXXXXXXXXX 891
            KNRKK ADGYERWMMK ANNGAAAFGEVER D KD                         
Sbjct: 181  KNRKKTADGYERWMMKAANNGAAAFGEVERFD-KDNSVTSGKGRKKAGDDDDGEGNVSDK 239

Query: 890  XXXXXXXXXXRKNRLRPNKSXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEA 711
                      RKNRL  NK                           DWEHEEIFTDDDEA
Sbjct: 240  GEEDEEEELARKNRL--NKKGGDDDDDDGARGADADLDDDDVEKGDDWEHEEIFTDDDEA 297

Query: 710  VGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXEGGLSTSGKELKKLLGKASGLNXXXXX 531
            VGN+PEEREDL  EVPAPP              EGGLS SGKELKKLLG+  GL+     
Sbjct: 298  VGNNPEEREDLELEVPAPPEIKQDDEDEDEDDKEGGLSKSGKELKKLLGRTGGLDDSDAE 357

Query: 530  XXXXXXXXXXXXXXXSPVLAPKQKDVPKEEPVDNSPSKAAATGSVRGTPPXXXXXXXXXX 351
                               APKQKD  KEEP DNSPSK   +GS RGTP           
Sbjct: 358  DDDDDDDDMDDDIGFPQAAAPKQKDASKEEPSDNSPSKPVPSGSARGTPSTAKSAKGKRK 417

Query: 350  SGGDDAKAANGAPSKK 303
               DDAK +N AP KK
Sbjct: 418  LSADDAKTSNSAPPKK 433



 Score = 91.3 bits (225), Expect(2) = e-157
 Identities = 49/64 (76%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
 Frame = -3

Query: 201 PVTEDEIRAVLLQMAPVTTQELVGRFKARLKTAEDKGAFAAILQKISKIQK-TGGHSYVV 25
           PVTE+EIR VL+Q  PVTTQ+LV RFKARL+  EDK AFAAIL+KISKIQK T G SYVV
Sbjct: 474 PVTEEEIRTVLVQRTPVTTQDLVARFKARLRLQEDKTAFAAILRKISKIQKTTNGSSYVV 533

Query: 24  LRDK 13
           LRDK
Sbjct: 534 LRDK 537


>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|223541454|gb|EEF43004.1|
            tfiif-alpha, putative [Ricinus communis]
          Length = 533

 Score =  483 bits (1244), Expect(2) = e-156
 Identities = 263/435 (60%), Positives = 286/435 (65%)
 Frame = -1

Query: 1607 SFDLHLKASCSGCGSPNELYGSNCKHMTLCLTCGKTMAEKRGKCYECGVPVTRLIREYNV 1428
            + DL LK SCSGCGS  +LYGSNCKHMTLCL+CGKTMAE   KC++CG  V+RLIREYNV
Sbjct: 3    TMDLMLKGSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHAKCFDCGATVSRLIREYNV 62

Query: 1427 RASSASDKSYFIARFVTGLPNFSKKKNAENKWSLHKEGLQGRHVTDALREKYKNKPWLLE 1248
            RASS+SDK+YFI RFVTGLP+FSKKKNAENKWSL KEGLQGR +TDALREKYKN+PWLLE
Sbjct: 63   RASSSSDKNYFIGRFVTGLPSFSKKKNAENKWSLQKEGLQGRQLTDALREKYKNRPWLLE 122

Query: 1247 DETGQSQYHGQLEGAQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 1068
            DETGQ QY G LEG+QSATYYLL++QGKEFVAIPA SWYNFNKVAQYKQLTLEEAEEKM+
Sbjct: 123  DETGQFQYQGHLEGSQSATYYLLILQGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMR 182

Query: 1067 NRKKNADGYERWMMKLANNGAAAFGEVERPDEKDXXXXXXXXXXXXXXXAXXXXXXXXXX 888
            NR+K ADGYERWMMK ANNG AAFGEVE+ D+KD                          
Sbjct: 183  NRRKTADGYERWMMKAANNGPAAFGEVEKLDDKD-SGAASGRGRKKAAGDDEEGNVSDRG 241

Query: 887  XXXXXXXXXRKNRLRPNKSXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAV 708
                     RKNRL  NK                           DWEHEEIFTDDDEAV
Sbjct: 242  DEDEEEEAARKNRLGLNK-RGGDDDEEGPRGGDHDIDDDDIEKGDDWEHEEIFTDDDEAV 300

Query: 707  GNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXEGGLSTSGKELKKLLGKASGLNXXXXXX 528
            GND EEREDLAPEVPAPP              EGGLS SGKELKKLLG+A GLN      
Sbjct: 301  GNDREEREDLAPEVPAPPEIKQDEDDEDEENEEGGLSKSGKELKKLLGRAGGLN-DSDAE 359

Query: 527  XXXXXXXXXXXXXXSPVLAPKQKDVPKEEPVDNSPSKAAATGSVRGTPPXXXXXXXXXXS 348
                          SPVLAPKQ   PKEEP DNSP+K   + S +GTP            
Sbjct: 360  DDDDDDDMDEDVSISPVLAPKQ--TPKEEPADNSPAKPMTSASSKGTPSTSKSAKGKRKL 417

Query: 347  GGDDAKAANGAPSKK 303
              D+AK  N AP KK
Sbjct: 418  NSDEAKQTNVAPQKK 432



 Score = 96.3 bits (238), Expect(2) = e-156
 Identities = 49/63 (77%), Positives = 56/63 (88%)
 Frame = -3

Query: 201 PVTEDEIRAVLLQMAPVTTQELVGRFKARLKTAEDKGAFAAILQKISKIQKTGGHSYVVL 22
           PVTE+EIRAVLLQ  PVTTQ+LV RFK+RLK++EDK AFA IL++ISKIQKT G SYVVL
Sbjct: 471 PVTEEEIRAVLLQNGPVTTQDLVARFKSRLKSSEDKKAFADILRRISKIQKTSGSSYVVL 530

Query: 21  RDK 13
           RDK
Sbjct: 531 RDK 533


>ref|XP_006857695.1| hypothetical protein AMTR_s00061p00167160 [Amborella trichopoda]
            gi|548861791|gb|ERN19162.1| hypothetical protein
            AMTR_s00061p00167160 [Amborella trichopoda]
          Length = 558

 Score =  475 bits (1223), Expect(2) = e-155
 Identities = 261/439 (59%), Positives = 290/439 (66%), Gaps = 3/439 (0%)
 Frame = -1

Query: 1610 MSFDLHLKASCSGCGSPNELYGSNCKHMTLCLTCGKTMAEKRGKCYECGVPVTRLIREYN 1431
            MS DL LK+SC GCGS ++LYGSNCKH+TLC +CGKTMAE R KCYECG P+TRLIREYN
Sbjct: 12   MSGDLVLKSSCVGCGSNSDLYGSNCKHLTLCQSCGKTMAETRSKCYECGTPITRLIREYN 71

Query: 1430 VRASSASDKSYFIARFVTGLPNFSKKKNAENKWSLHKEGLQGRHVTDALREKYKNKPWLL 1251
            VRA+  +DK+Y+I+RFV GLP FS+KKN + KW+L KEGLQGR VT++LREK+KNKPWLL
Sbjct: 72   VRANVNTDKTYYISRFVMGLPGFSRKKNGDVKWTLQKEGLQGRQVTESLREKFKNKPWLL 131

Query: 1250 EDETGQSQYHGQLEGAQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1071
            EDETGQ QYHGQLEGAQSATYYLL  QGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 132  EDETGQHQYHGQLEGAQSATYYLLTNQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 191

Query: 1070 KNRKKNADGYERWMMKLANNGAAAFGEVERPD-EKDXXXXXXXXXXXXXXXAXXXXXXXX 894
            KNR+KNA+GYERW+MK ANNGA+AF ++E+ D                            
Sbjct: 192  KNRRKNAEGYERWIMKAANNGASAFRDMEKIDGSGGNGGASGGRRRKGSGDEDDDAVRSD 251

Query: 893  XXXXXXXXXXXRKNRLRPNKSXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDE 714
                       RKNRL  NK                           DWEHEEIFTDDDE
Sbjct: 252  REGEDDDDEEARKNRLGLNKKTFDDEGEEVPRGDDHDFDDDDIEKGDDWEHEEIFTDDDE 311

Query: 713  AVGNDPEEREDLAPEVPAPP--XXXXXXXXXXXXXXEGGLSTSGKELKKLLGKASGLNXX 540
            AVGNDPEERED APEVPAPP                EGGLS SG+ELKKLLG+A GLN  
Sbjct: 312  AVGNDPEEREDFAPEVPAPPEIKQDDEDEDEGNEDEEGGLSKSGRELKKLLGRAGGLN-E 370

Query: 539  XXXXXXXXXXXXXXXXXXSPVLAPKQKDVPKEEPVDNSPSKAAATGSVRGTPPXXXXXXX 360
                              S VLAPKQK+V KEEPVDNSP+K A +GS RGTP        
Sbjct: 371  SDGDDDDDDDDLDDDMGTSSVLAPKQKEV-KEEPVDNSPTKTATSGSNRGTPSTSKSTKA 429

Query: 359  XXXSGGDDAKAANGAPSKK 303
               SG DDAK A  APSKK
Sbjct: 430  KRKSGSDDAKPAASAPSKK 448



 Score =  101 bits (252), Expect(2) = e-155
 Identities = 57/97 (58%), Positives = 69/97 (71%), Gaps = 2/97 (2%)
 Frame = -3

Query: 297 KDGPTSSHKSNNAT-IKXXXXXXXXXXXXXXXGPVTEDEIRAVLLQMAPVTTQELVGRFK 121
           KD P S+ +SN    +                 PVTEDEIRAVLLQMAPVTTQ+LVG+FK
Sbjct: 462 KDEPASAQRSNTPVKLPSSSGTKPAGSPVAAAVPVTEDEIRAVLLQMAPVTTQDLVGKFK 521

Query: 120 ARLKTAEDKGAFAAILQKISKIQKT-GGHSYVVLRDK 13
           ARL+T EDK +FAA+L+KIS+IQKT GG ++VVLRDK
Sbjct: 522 ARLRTKEDKDSFAAVLKKISRIQKTNGGANFVVLRDK 558


>ref|XP_004250258.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Solanum lycopersicum]
          Length = 534

 Score =  473 bits (1218), Expect(2) = e-150
 Identities = 263/438 (60%), Positives = 292/438 (66%), Gaps = 2/438 (0%)
 Frame = -1

Query: 1610 MSFDLHLKASCSGCGSPNELYGSNCKHMTLCLTCGKTMAEKRGKCYECGVPVTRLIREYN 1431
            MS DL LK SCS CGS ++LYGS+CKH+TLCL+CGK MAE R KCYECG PVTRLIREYN
Sbjct: 1    MSIDLILKPSCSRCGSSSDLYGSSCKHLTLCLSCGKNMAETRDKCYECGTPVTRLIREYN 60

Query: 1430 VRASSASDKSYFIARFVTGLPNFSKKKNAENKWSLHKEGLQGRHVTDALREKYKNKPWLL 1251
            VRA S++DK++FIARF +GLP FSKKKN ++KW+L KEGLQGR VTD LREKYKNKPWLL
Sbjct: 61   VRACSSNDKNHFIARFASGLPKFSKKKN-DSKWTLQKEGLQGRQVTDTLREKYKNKPWLL 119

Query: 1250 EDETGQSQYHGQLEGAQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1071
            EDETGQ Q+HG LEGAQSA YYLLMMQG+E  AIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 120  EDETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLTLEEAEEKM 179

Query: 1070 KNRKKNADGYERWMMKLANNGAAAFGEVERPDEKDXXXXXXXXXXXXXXXAXXXXXXXXX 891
            KNR+K ADGY+RWMMK ANNG AAFGE+ER D+K+                         
Sbjct: 180  KNRRKTADGYQRWMMKAANNGPAAFGELERFDDKE-GGSGGTRGRKKTSGDEDEGNASDH 238

Query: 890  XXXXXXXXXXRKNRLRPNKSXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEA 711
                      RKNRL  NK                           DWEHEEIFTDDDEA
Sbjct: 239  GDEDEEEEAARKNRLGLNK-RGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEA 297

Query: 710  VGNDPEEREDLAPEVPAPP-XXXXXXXXXXXXXXEGGLSTSGKELKKLLGKASGLNXXXX 534
            VGNDPEEREDLAPE+PAPP                GGLS SGKELKKLLGKA+GLN    
Sbjct: 298  VGNDPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKKLLGKANGLN---- 353

Query: 533  XXXXXXXXXXXXXXXXSPVLAPKQKDVPKEEPVD-NSPSKAAATGSVRGTPPXXXXXXXX 357
                            SPVLAPK K+ PKEEPV+ NSP KAAA+GS RGT P        
Sbjct: 354  ESDEDDDDDDDTEEDISPVLAPKPKEAPKEEPVETNSPLKAAASGSNRGT-PTSKSAKTK 412

Query: 356  XXSGGDDAKAANGAPSKK 303
              + GD++K  +GAP KK
Sbjct: 413  RKANGDESKPTSGAPLKK 430



 Score = 88.6 bits (218), Expect(2) = e-150
 Identities = 47/64 (73%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
 Frame = -3

Query: 201 PVTEDEIRAVLLQMAPVTTQELVGRFKARLKTAEDKGAFAAILQKISKIQK-TGGHSYVV 25
           PVTEDEIRAVLLQ  PVTTQ+LV +FK+RLK  EDK AFA +L+KISKIQK T G SYVV
Sbjct: 471 PVTEDEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTTGSSYVV 530

Query: 24  LRDK 13
           LR++
Sbjct: 531 LRER 534


>ref|XP_006352364.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Solanum tuberosum]
            gi|565371548|ref|XP_006352365.1| PREDICTED: transcription
            initiation factor IIF subunit alpha-like isoform X2
            [Solanum tuberosum] gi|565371550|ref|XP_006352366.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha-like isoform X3 [Solanum tuberosum]
          Length = 538

 Score =  473 bits (1216), Expect(2) = e-150
 Identities = 263/438 (60%), Positives = 291/438 (66%), Gaps = 2/438 (0%)
 Frame = -1

Query: 1610 MSFDLHLKASCSGCGSPNELYGSNCKHMTLCLTCGKTMAEKRGKCYECGVPVTRLIREYN 1431
            MS DL LK SCS CGS ++LYGS+CKH+TLCL+CGK MAE R KCYECG PVTRLIREYN
Sbjct: 1    MSIDLILKPSCSRCGSSSDLYGSSCKHLTLCLSCGKNMAETRDKCYECGTPVTRLIREYN 60

Query: 1430 VRASSASDKSYFIARFVTGLPNFSKKKNAENKWSLHKEGLQGRHVTDALREKYKNKPWLL 1251
            VRA S++DK++FIARF +GLP FSKKKN ++KW+L KEGLQGR VTD LREKYKNKPWLL
Sbjct: 61   VRACSSNDKNHFIARFASGLPKFSKKKN-DSKWTLQKEGLQGRQVTDTLREKYKNKPWLL 119

Query: 1250 EDETGQSQYHGQLEGAQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1071
            EDETGQ Q+HG LEGAQSA YYLLMMQG+E  AIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 120  EDETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLTLEEAEEKM 179

Query: 1070 KNRKKNADGYERWMMKLANNGAAAFGEVERPDEKDXXXXXXXXXXXXXXXAXXXXXXXXX 891
            KNR+K ADGY+RWMMK ANNG AAFGEVER D+K+                         
Sbjct: 180  KNRRKTADGYQRWMMKAANNGPAAFGEVERFDDKE-GGSGGTRGRKKTSGDEDEGNASDH 238

Query: 890  XXXXXXXXXXRKNRLRPNKSXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEA 711
                      RKNRL  NK                           DWEHEEIFTDDDEA
Sbjct: 239  GDEDEEEEAARKNRLGLNK-RGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEA 297

Query: 710  VGNDPEEREDLAPEVPAPP-XXXXXXXXXXXXXXEGGLSTSGKELKKLLGKASGLNXXXX 534
            VGNDPEEREDLAPE+PAPP                GGLS SGKELKKLLGKA+GLN    
Sbjct: 298  VGNDPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKKLLGKANGLN---E 354

Query: 533  XXXXXXXXXXXXXXXXSPVLAPKQKDVPKEEPVD-NSPSKAAATGSVRGTPPXXXXXXXX 357
                            SPVLAPK K+ PKEEPV+ NSP K AA+GS RGT P        
Sbjct: 355  SDAEDDDDDDDTEEDISPVLAPKPKEAPKEEPVETNSPLKPAASGSNRGT-PTSKSAKTK 413

Query: 356  XXSGGDDAKAANGAPSKK 303
              + GD++K  +GAP KK
Sbjct: 414  RKANGDESKPTSGAPLKK 431



 Score = 88.6 bits (218), Expect(2) = e-150
 Identities = 47/64 (73%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
 Frame = -3

Query: 201 PVTEDEIRAVLLQMAPVTTQELVGRFKARLKTAEDKGAFAAILQKISKIQK-TGGHSYVV 25
           PVTEDEIRAVLLQ  PVTTQ+LV +FK+RLK  EDK AFA +L+KISKIQK T G SYVV
Sbjct: 472 PVTEDEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTTGSSYVV 531

Query: 24  LRDK 13
           LR++
Sbjct: 532 LRER 535


>ref|XP_006352367.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X4 [Solanum tuberosum]
          Length = 535

 Score =  473 bits (1216), Expect(2) = e-150
 Identities = 263/438 (60%), Positives = 291/438 (66%), Gaps = 2/438 (0%)
 Frame = -1

Query: 1610 MSFDLHLKASCSGCGSPNELYGSNCKHMTLCLTCGKTMAEKRGKCYECGVPVTRLIREYN 1431
            MS DL LK SCS CGS ++LYGS+CKH+TLCL+CGK MAE R KCYECG PVTRLIREYN
Sbjct: 1    MSIDLILKPSCSRCGSSSDLYGSSCKHLTLCLSCGKNMAETRDKCYECGTPVTRLIREYN 60

Query: 1430 VRASSASDKSYFIARFVTGLPNFSKKKNAENKWSLHKEGLQGRHVTDALREKYKNKPWLL 1251
            VRA S++DK++FIARF +GLP FSKKKN ++KW+L KEGLQGR VTD LREKYKNKPWLL
Sbjct: 61   VRACSSNDKNHFIARFASGLPKFSKKKN-DSKWTLQKEGLQGRQVTDTLREKYKNKPWLL 119

Query: 1250 EDETGQSQYHGQLEGAQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1071
            EDETGQ Q+HG LEGAQSA YYLLMMQG+E  AIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 120  EDETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLTLEEAEEKM 179

Query: 1070 KNRKKNADGYERWMMKLANNGAAAFGEVERPDEKDXXXXXXXXXXXXXXXAXXXXXXXXX 891
            KNR+K ADGY+RWMMK ANNG AAFGEVER D+K+                         
Sbjct: 180  KNRRKTADGYQRWMMKAANNGPAAFGEVERFDDKE-GGSGGTRGRKKTSGDEDEGNASDH 238

Query: 890  XXXXXXXXXXRKNRLRPNKSXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEA 711
                      RKNRL  NK                           DWEHEEIFTDDDEA
Sbjct: 239  GDEDEEEEAARKNRLGLNK-RGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEA 297

Query: 710  VGNDPEEREDLAPEVPAPP-XXXXXXXXXXXXXXEGGLSTSGKELKKLLGKASGLNXXXX 534
            VGNDPEEREDLAPE+PAPP                GGLS SGKELKKLLGKA+GLN    
Sbjct: 298  VGNDPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKKLLGKANGLN---E 354

Query: 533  XXXXXXXXXXXXXXXXSPVLAPKQKDVPKEEPVD-NSPSKAAATGSVRGTPPXXXXXXXX 357
                            SPVLAPK K+ PKEEPV+ NSP K AA+GS RGT P        
Sbjct: 355  SDAEDDDDDDDTEEDISPVLAPKPKEAPKEEPVETNSPLKPAASGSNRGT-PTSKSAKTK 413

Query: 356  XXSGGDDAKAANGAPSKK 303
              + GD++K  +GAP KK
Sbjct: 414  RKANGDESKPTSGAPLKK 431



 Score = 88.6 bits (218), Expect(2) = e-150
 Identities = 47/64 (73%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
 Frame = -3

Query: 201 PVTEDEIRAVLLQMAPVTTQELVGRFKARLKTAEDKGAFAAILQKISKIQK-TGGHSYVV 25
           PVTEDEIRAVLLQ  PVTTQ+LV +FK+RLK  EDK AFA +L+KISKIQK T G SYVV
Sbjct: 472 PVTEDEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTTGSSYVV 531

Query: 24  LRDK 13
           LR++
Sbjct: 532 LRER 535


>ref|XP_004152016.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Cucumis sativus] gi|449517383|ref|XP_004165725.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha-like [Cucumis sativus]
          Length = 538

 Score =  461 bits (1187), Expect(2) = e-146
 Identities = 253/437 (57%), Positives = 281/437 (64%), Gaps = 2/437 (0%)
 Frame = -1

Query: 1610 MSFDLHLKASCSGCGSPNELYGSNCKHMTLCLTCGKTMAEKRGKCYECGVPVTRLIREYN 1431
            MSFDL LK SCSGCGS  ELYGSNCKHMTLCLTCGKTMAE +GKCY+CG  VTRLIREYN
Sbjct: 1    MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60

Query: 1430 VRASSASDKSYFIARFVTGLPNFSKKKNAENKWSLHKEGLQGRHVTDALREKYKNKPWLL 1251
            VRAS+++DK+YFI RF++GLPNFSKK+NAENKWSL+KEGLQGR ++DALREKYKN+PWLL
Sbjct: 61   VRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120

Query: 1250 EDETGQSQYHGQLEGAQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1071
            EDETGQ Q+ G LEG+QSATYYLL++QGKEF AIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1070 KNRKKNADGYERWMMKLANNGAAAFGEVERPDEKDXXXXXXXXXXXXXXXAXXXXXXXXX 891
            KNRKK ADGYERWMMK A+NG AAFGEVE+ D+K+                         
Sbjct: 181  KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKE-TVGTSGRGRRKTTGDENEGNVSDR 239

Query: 890  XXXXXXXXXXRKNRL-RPNKSXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDE 714
                      RKNRL    K                           DWEHEEIFTDDDE
Sbjct: 240  GEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDE 299

Query: 713  AVGNDPEEREDLAPEVPAPP-XXXXXXXXXXXXXXEGGLSTSGKELKKLLGKASGLNXXX 537
                D EEREDLAPEVPAPP               EGGLS SGKELKKLL +  GLN   
Sbjct: 300  TTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLN-DS 358

Query: 536  XXXXXXXXXXXXXXXXXSPVLAPKQKDVPKEEPVDNSPSKAAATGSVRGTPPXXXXXXXX 357
                             +PVL  KQKD  KEE   NSPSK   +GS +GT P        
Sbjct: 359  DGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGT-PSTAKTAKG 417

Query: 356  XXSGGDDAKAANGAPSK 306
                G+D K ++  P K
Sbjct: 418  KRKNGEDVKPSSAPPKK 434



 Score = 87.0 bits (214), Expect(2) = e-146
 Identities = 46/62 (74%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
 Frame = -3

Query: 201 PVTEDEIRAVLLQMAPVTTQELVGRFKARLKTAEDKGAFAAILQKISKIQKT-GGHSYVV 25
           PVTE+EIRAVL Q  PVTTQ+LV +FKARL+T EDK AFA IL++IS+IQKT GG SYVV
Sbjct: 473 PVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVV 532

Query: 24  LR 19
           LR
Sbjct: 533 LR 534


>ref|XP_003594206.1| Transcription initiation factor IIF subunit alpha [Medicago
            truncatula] gi|87241158|gb|ABD33016.1| Transcription
            Factor IIF, Rap30/Rap74, interaction [Medicago
            truncatula] gi|355483254|gb|AES64457.1| Transcription
            initiation factor IIF subunit alpha [Medicago truncatula]
          Length = 536

 Score =  454 bits (1169), Expect(2) = e-145
 Identities = 249/436 (57%), Positives = 275/436 (63%), Gaps = 3/436 (0%)
 Frame = -1

Query: 1601 DLHLKASCSGCGSPNELYGSNCKHMTLCLTCGKTMAEKRGKCYECGVPVTRLIREYNVRA 1422
            DL LK+SCSGCG    LYGSNCKH+T+C  CGKTMAE R KC  CG  +TRLIREYNVRA
Sbjct: 2    DLQLKSSCSGCGETTGLYGSNCKHLTICAPCGKTMAENRSKCSTCGALLTRLIREYNVRA 61

Query: 1421 SSASDKSYFIARFVTGLPNFSKKKNAENKWSLHKEGLQGRHVTDALREKYKNKPWLLEDE 1242
            SSA+DK+YFI RF+TGLP+FSKKK+AENKWSL K+GL+GR VTDA REKYKN+PWLLEDE
Sbjct: 62   SSANDKNYFIGRFMTGLPDFSKKKSAENKWSLQKDGLKGRQVTDATREKYKNRPWLLEDE 121

Query: 1241 TGQSQYHGQLEGAQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR 1062
            TGQSQ+ G LEG+QSATYYLLM + KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR
Sbjct: 122  TGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR 181

Query: 1061 KKNADGYERWMMKLANNGAAAFGEVERPDEKDXXXXXXXXXXXXXXXAXXXXXXXXXXXX 882
            KK ADGY+RWMMK ANNG AAFGE  + D+K+                            
Sbjct: 182  KKTADGYQRWMMKAANNGPAAFGEHGKLDDKESNAGGGRGRKKTGDDEDEGPSSDKGEED 241

Query: 881  XXXXXXXRKNRLRPNKSXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGN 702
                   +K   RPNK                           DWEHEEIFTDDDEAVGN
Sbjct: 242  EDEEVDRKK---RPNKKNTFDDDEEGPRGGDHDEDDYDVEKGDDWEHEEIFTDDDEAVGN 298

Query: 701  DPEEREDLAPEVPAPP---XXXXXXXXXXXXXXEGGLSTSGKELKKLLGKASGLNXXXXX 531
            DPEEREDLAPEVPAPP                  GGLS SGKELKKLLG+  GL+     
Sbjct: 299  DPEEREDLAPEVPAPPEIKQDDEEEEEDEDNEEGGGLSKSGKELKKLLGRTGGLS-ESDD 357

Query: 530  XXXXXXXXXXXXXXXSPVLAPKQKDVPKEEPVDNSPSKAAATGSVRGTPPXXXXXXXXXX 351
                             V A KQK+ PKEEPVDNSPSK  ATG  RGTP           
Sbjct: 358  DDDDDDDDIDDEDGVPAVTATKQKE-PKEEPVDNSPSKPTATGPARGTP--TSKSSKAKR 414

Query: 350  SGGDDAKAANGAPSKK 303
               ++AK +   P KK
Sbjct: 415  KANEEAKPSISVPPKK 430



 Score = 91.7 bits (226), Expect(2) = e-145
 Identities = 53/99 (53%), Positives = 63/99 (63%)
 Frame = -3

Query: 309 KKGXKDGPTSSHKSNNATIKXXXXXXXXXXXXXXXGPVTEDEIRAVLLQMAPVTTQELVG 130
           K   KD   SS KSN                    GPVTE+EI+AVLLQ  P+TTQELV 
Sbjct: 438 KSSAKDVNGSSSKSNAPPRGTPPPSSNSGSSNAASGPVTEEEIKAVLLQRTPLTTQELVA 497

Query: 129 RFKARLKTAEDKGAFAAILQKISKIQKTGGHSYVVLRDK 13
           +F+ARL+  EDK AFA IL++ISKIQKT G SYV+LR+K
Sbjct: 498 KFRARLRCKEDKEAFANILKRISKIQKTNGSSYVILREK 536


>ref|XP_004486214.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Cicer arietinum]
          Length = 538

 Score =  460 bits (1183), Expect(2) = e-145
 Identities = 256/438 (58%), Positives = 283/438 (64%), Gaps = 2/438 (0%)
 Frame = -1

Query: 1610 MSFDLHLKASCSGCGSPNELYGSNCKHMTLCLTCGKTMAEKRGKCYECGVPVTRLIREYN 1431
            M+ DL LK+ CSGC S  +LYGSNCKHMTLCLTCGKTMAE R KCY+CG  +TRLIREYN
Sbjct: 1    MTMDLQLKSCCSGCRSTTDLYGSNCKHMTLCLTCGKTMAENRAKCYDCGATLTRLIREYN 60

Query: 1430 VRASSASDKSYFIARFVTGLPNFSKKKNAENKWSLHKEGLQGRHVTDALREKYKNKPWLL 1251
            VRASSA+DK+YFI RF+TGLP+FSKKK+AENKW L K+GLQ R VTDALREK+KN+PWLL
Sbjct: 61   VRASSANDKNYFIGRFMTGLPDFSKKKSAENKWCLQKDGLQRREVTDALREKFKNRPWLL 120

Query: 1250 EDETGQSQYHGQLEGAQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1071
            EDETGQSQY G LEG+QSATYYLLM + KEFVA PAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQYQGHLEGSQSATYYLLMKEKKEFVAXPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1070 KNRKKNADGYERWMMKLANNGAAAFGEVERPDEKDXXXXXXXXXXXXXXXAXXXXXXXXX 891
            KNRKK ADGY+RWMMK ANNG AAFGE  + DEK+                         
Sbjct: 181  KNRKKTADGYQRWMMKAANNGPAAFGEHGKLDEKE--SNTGGGRSRKKTGDDDEGVVSDK 238

Query: 890  XXXXXXXXXXRKNRLRPN-KSXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDE 714
                      RK+RL  N KS                          DWEHEEIFTDDDE
Sbjct: 239  GEEDEDEEVDRKSRLGLNKKSGYDDDEDEGPKGGDSDIDGDDIEKGDDWEHEEIFTDDDE 298

Query: 713  AVGNDPEEREDLAPEVPAPP-XXXXXXXXXXXXXXEGGLSTSGKELKKLLGKASGLNXXX 537
            AVGNDPEEREDLAPE+PAPP               EGGLS SGKELKKLLG+ SGL+   
Sbjct: 299  AVGNDPEEREDLAPEIPAPPEIKQDDDEEDEDNEEEGGLSKSGKELKKLLGRTSGLDESD 358

Query: 536  XXXXXXXXXXXXXXXXXSPVLAPKQKDVPKEEPVDNSPSKAAATGSVRGTPPXXXXXXXX 357
                              PV A K++  PKEEPVD SPSK   TG  RGTP         
Sbjct: 359  AEDDDDDDDDIDDEVGVPPVTAAKKE--PKEEPVDTSPSKPTTTGPARGTP--TSKSSKG 414

Query: 356  XXSGGDDAKAANGAPSKK 303
                 ++AK  N AP+KK
Sbjct: 415  KRKASEEAK-PNIAPTKK 431



 Score = 85.5 bits (210), Expect(2) = e-145
 Identities = 51/100 (51%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = -3

Query: 309 KKGXKDGPTSSHKSNNATIKXXXXXXXXXXXXXXXGPVTEDEIRAVLLQMAPVTTQELVG 130
           K   KD   S+ KSN  +                 GPVTE+EIR VL+Q  PVTTQ+LV 
Sbjct: 439 KSSGKDVNGSTSKSNAPSKGAPPPPSKAGSSTAASGPVTEEEIRTVLMQKTPVTTQDLVA 498

Query: 129 RFKARLKTAEDKGAFAAILQKISKIQK-TGGHSYVVLRDK 13
           +FKARL+ +EDK AFA IL++ISKIQK T G SYV+LR +
Sbjct: 499 KFKARLRCSEDKQAFAEILKRISKIQKTTNGSSYVILRGR 538


>ref|XP_006586768.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Glycine max]
          Length = 536

 Score =  460 bits (1183), Expect(2) = e-145
 Identities = 255/441 (57%), Positives = 278/441 (63%), Gaps = 1/441 (0%)
 Frame = -1

Query: 1610 MSFDLHLKASCSGCGSPNELYGSNCKHMTLCLTCGKTMAEKRGKCYECGVPVTRLIREYN 1431
            MS DL LK+SCSGCGS  +LYGSNCKHMTLCL CGKTMA KR KC +CG  +TRLIREYN
Sbjct: 1    MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLGCGKTMAAKRAKCVDCGATLTRLIREYN 60

Query: 1430 VRASSASDKSYFIARFVTGLPNFSKKKNAENKWSLHKEGLQGRHVTDALREKYKNKPWLL 1251
            VRASS +DK+YFI RF+ GLP+FSKKK+AENKWSL K+GL GR +TD LREKYKNKPWLL
Sbjct: 61   VRASSPNDKNYFIGRFINGLPDFSKKKSAENKWSLQKDGLHGRQITDTLREKYKNKPWLL 120

Query: 1250 EDETGQSQYHGQLEGAQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1071
            EDETGQSQ+ G LEG+QSATYYLLM + KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQFQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1070 KNRKKNADGYERWMMKLANNGAAAFGEVERPDEKDXXXXXXXXXXXXXXXAXXXXXXXXX 891
            KNRKK ADGY+RWMMK ANNG AAFGE  + D  D                         
Sbjct: 181  KNRKKTADGYQRWMMKAANNGPAAFGEHGKFD--DNESNTGGGRSHKKTDEDDEGHVSDK 238

Query: 890  XXXXXXXXXXRKNRLRPNKSXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEA 711
                      RK+RL  NK                               E IFTDDDEA
Sbjct: 239  GEEDEEEESERKSRLGLNKRAGEDDEEGPRGGDHDLDDDDVEKGDDWEHEE-IFTDDDEA 297

Query: 710  VGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXEG-GLSTSGKELKKLLGKASGLNXXXX 534
            VGNDPEEREDLAPEVPAPP              EG GLS SGKELKKLLGKASGLN    
Sbjct: 298  VGNDPEEREDLAPEVPAPPEIKQDEEEEDEDNEEGEGLSKSGKELKKLLGKASGLNESDA 357

Query: 533  XXXXXXXXXXXXXXXXSPVLAPKQKDVPKEEPVDNSPSKAAATGSVRGTPPXXXXXXXXX 354
                             PV+A KQKD  KEEP+DNSPSK  ATG  RGTP          
Sbjct: 358  EDDDDDDDDVDDDVGVPPVIATKQKDALKEEPIDNSPSKPTATGPARGTPSSKSSKGKRK 417

Query: 353  XSGGDDAKAANGAPSKKXLKM 291
                ++ K +N A  KK  K+
Sbjct: 418  L--NEETKPSNTATPKKEPKL 436



 Score = 85.1 bits (209), Expect(2) = e-145
 Identities = 45/64 (70%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
 Frame = -3

Query: 201 PVTEDEIRAVLLQMAPVTTQELVGRFKARLKTAEDKGAFAAILQKISKIQK-TGGHSYVV 25
           PV+E+EIRAVL Q  PVTTQ+LV +FKARL+ +EDK AFA IL++ISKIQK T G SYV+
Sbjct: 473 PVSEEEIRAVLRQKTPVTTQDLVAKFKARLRCSEDKQAFAEILKRISKIQKTTTGASYVI 532

Query: 24  LRDK 13
           LRDK
Sbjct: 533 LRDK 536


>ref|XP_007147660.1| hypothetical protein PHAVU_006G143600g [Phaseolus vulgaris]
            gi|561020883|gb|ESW19654.1| hypothetical protein
            PHAVU_006G143600g [Phaseolus vulgaris]
          Length = 540

 Score =  457 bits (1175), Expect(2) = e-145
 Identities = 255/445 (57%), Positives = 278/445 (62%), Gaps = 1/445 (0%)
 Frame = -1

Query: 1610 MSFDLHLKASCSGCGSPNELYGSNCKHMTLCLTCGKTMAEKRGKCYECGVPVTRLIREYN 1431
            MS DL LK+SCSGCGS  +LYGSNCKHMTLCL+CGKTMAE R KC +CGV +TRLIREYN
Sbjct: 1    MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENRAKCVDCGVTLTRLIREYN 60

Query: 1430 VRASSASDKSYFIARFVTGLPNFSKKKNAENKWSLHKEGLQGRHVTDALREKYKNKPWLL 1251
            VRASS +DK+YFI RF+TGLP+FSKKK+AENKW+L KEGL GR +TD LREKYKNKPWLL
Sbjct: 61   VRASSTNDKNYFIGRFMTGLPDFSKKKSAENKWALQKEGLLGRQITDTLREKYKNKPWLL 120

Query: 1250 EDETGQSQYHGQLEGAQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1071
            EDETGQSQY G LEG+QSATYYLLM + KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQYQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1070 KNRKKNADGYERWMMKLANNGAAAFGEVERPDEKDXXXXXXXXXXXXXXXAXXXXXXXXX 891
            KNRKK ADGY+RWMMK ANNG AAFG+  + DEK+                         
Sbjct: 181  KNRKKTADGYQRWMMKAANNGPAAFGDHGKFDEKE--SNTGGGRSRKKTGEEEEGHVSDK 238

Query: 890  XXXXXXXXXXRKNRLRPNKSXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEA 711
                      RKNRL   K                               E    DD EA
Sbjct: 239  GEEDEDDESERKNRLGLYKRPADDDEEGPRGGDHDLEDDDVEKGDDWEHEEIFTDDD-EA 297

Query: 710  VGNDPEEREDLAPEVPAPP-XXXXXXXXXXXXXXEGGLSTSGKELKKLLGKASGLNXXXX 534
            VGNDPEEREDLAPEVPAPP                GGLS SGKELKKLLGKASGLN    
Sbjct: 298  VGNDPEEREDLAPEVPAPPEIKQDEEEEDEDNEEGGGLSKSGKELKKLLGKASGLNESDA 357

Query: 533  XXXXXXXXXXXXXXXXSPVLAPKQKDVPKEEPVDNSPSKAAATGSVRGTPPXXXXXXXXX 354
                             PV+A K KD PKEEPVDNSPSK  ATG  RGTP          
Sbjct: 358  EDEDDDDDDMDDEVGNPPVIATKTKDAPKEEPVDNSPSKPTATGPARGTP--SSKSSKGK 415

Query: 353  XSGGDDAKAANGAPSKKXLKMDPHP 279
                ++ K  N A  KK +K +  P
Sbjct: 416  RKSNEEVKPTNTATPKK-VKQENEP 439



 Score = 87.0 bits (214), Expect(2) = e-145
 Identities = 45/64 (70%), Positives = 55/64 (85%), Gaps = 1/64 (1%)
 Frame = -3

Query: 201 PVTEDEIRAVLLQMAPVTTQELVGRFKARLKTAEDKGAFAAILQKISKIQKT-GGHSYVV 25
           PV+E+EIRAVL Q  PVTTQ+LV +FKARL+++EDK AFA IL++ISKIQKT  G SYV+
Sbjct: 477 PVSEEEIRAVLRQKTPVTTQDLVAKFKARLRSSEDKQAFAEILKRISKIQKTANGSSYVI 536

Query: 24  LRDK 13
           LRDK
Sbjct: 537 LRDK 540


>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  518 bits (1333), Expect = e-144
 Identities = 280/438 (63%), Positives = 298/438 (68%), Gaps = 2/438 (0%)
 Frame = -1

Query: 1610 MSFDLHLKASCSGCGSPNELYGSNCKHMTLCLTCGKTMAEKRGKCYECGVPVTRLIREYN 1431
            MSFDL LK SCSGCGS  +LYGSNCKHMTLCL+CGKTMAE  GKCY+CG PVTRLIREYN
Sbjct: 1    MSFDLMLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYN 60

Query: 1430 VRASSASDKSYFIARFVTGLPNFSKKKNAENKWSLHKEGLQGRHVTDALREKYKNKPWLL 1251
            VR +S+ DK+YFI RFVTGLP FSKKKNA+NKWSLHKEGLQGR V+DALREKYKNKPWLL
Sbjct: 61   VRTNSSGDKNYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLL 120

Query: 1250 EDETGQSQYHGQLEGAQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1071
            EDETGQ QYHGQLEG+QSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1070 KNRKKNADGYERWMMKLANNGAAAFGEVERPDEKD-XXXXXXXXXXXXXXXAXXXXXXXX 894
            KNR++ ADGY+RWMMK ANNG AAFGEVE+ D+K+                         
Sbjct: 181  KNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSD 240

Query: 893  XXXXXXXXXXXRKNRLRPNKSXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDE 714
                       RKNRL  NK                           DWEHEEIFTDDDE
Sbjct: 241  KAEEDEEEEAERKNRLGLNK-RSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDE 299

Query: 713  AVGNDPEEREDLAPEVPAPP-XXXXXXXXXXXXXXEGGLSTSGKELKKLLGKASGLNXXX 537
            AVGNDPEEREDLAPEVPAPP               EGGLS SGKELKKLLGKA+G+N   
Sbjct: 300  AVGNDPEEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMN--D 357

Query: 536  XXXXXXXXXXXXXXXXXSPVLAPKQKDVPKEEPVDNSPSKAAATGSVRGTPPXXXXXXXX 357
                             SPVLAPKQKDVPKEEP DNSP K +AT S R TPP        
Sbjct: 358  SDAEDDDDDEEEDEIGLSPVLAPKQKDVPKEEPADNSPMK-SATASARSTPPTSKSSKGK 416

Query: 356  XXSGGDDAKAANGAPSKK 303
              S GDD K  NG P KK
Sbjct: 417  RKSNGDDMKTTNGGPPKK 434



 Score = 97.4 bits (241), Expect = 2e-17
 Identities = 50/63 (79%), Positives = 56/63 (88%)
 Frame = -3

Query: 201 PVTEDEIRAVLLQMAPVTTQELVGRFKARLKTAEDKGAFAAILQKISKIQKTGGHSYVVL 22
           PVTEDEIRAVLLQ APVTTQ+LV +FKARLK+ EDK AFA IL++ISKIQKT G +YVVL
Sbjct: 477 PVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVL 536

Query: 21  RDK 13
           RDK
Sbjct: 537 RDK 539


>ref|XP_007154011.1| hypothetical protein PHAVU_003G083500g [Phaseolus vulgaris]
            gi|561027365|gb|ESW26005.1| hypothetical protein
            PHAVU_003G083500g [Phaseolus vulgaris]
          Length = 540

 Score =  453 bits (1165), Expect(2) = e-143
 Identities = 258/445 (57%), Positives = 280/445 (62%), Gaps = 1/445 (0%)
 Frame = -1

Query: 1610 MSFDLHLKASCSGCGSPNELYGSNCKHMTLCLTCGKTMAEKRGKCYECGVPVTRLIREYN 1431
            MS DL LK +C GCGS  +LYGSNCKHMTLCLTCGKTMAE + KC++CG  VTRLIREY+
Sbjct: 1    MSIDLLLKPTCGGCGSTTDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGATVTRLIREYS 60

Query: 1430 VRASSASDKSYFIARFVTGLPNFSKKKNAENKWSLHKEGLQGRHVTDALREKYKNKPWLL 1251
            VRASS SDK YFI RFV+GLP+FSKKK+AENKWSL KEGLQ R VTDALREKYKNKPWLL
Sbjct: 61   VRASSGSDKHYFIGRFVSGLPDFSKKKSAENKWSLQKEGLQSRQVTDALREKYKNKPWLL 120

Query: 1250 EDETGQSQYHGQLEGAQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1071
            EDETGQSQ+ G LEGAQSATYYLLMM+ KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQFQGHLEGAQSATYYLLMMERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1070 KNRKKNADGYERWMMKLANNGAAAFGEVERPDEKDXXXXXXXXXXXXXXXAXXXXXXXXX 891
            KNRKK ADGYERWMMK ANNG AAFGE  R DEK+                         
Sbjct: 181  KNRKKTADGYERWMMKAANNGPAAFGERGRFDEKE-SNVGGGGKNRKKTDEDEEGHVSDK 239

Query: 890  XXXXXXXXXXRKNRLRPNKSXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEA 711
                      R++RL  NK                               E    DD EA
Sbjct: 240  GEEDEDDEVARRSRLGLNKKGGDDDEEGPRGGDLDQDDDDIEKGDDWEHEEIFTDDD-EA 298

Query: 710  VGNDPEEREDLAPEVPAPP-XXXXXXXXXXXXXXEGGLSTSGKELKKLLGKASGLNXXXX 534
            VGNDPEEREDLAPEVPAPP                GGLS SGKELKKLL + SGLN    
Sbjct: 299  VGNDPEEREDLAPEVPAPPEIKQDDEDEDEDNEEGGGLSKSGKELKKLL-RTSGLN-ESD 356

Query: 533  XXXXXXXXXXXXXXXXSPVLAPKQKDVPKEEPVDNSPSKAAATGSVRGTPPXXXXXXXXX 354
                             PV+A K KD PKEEP DNSPSK A TG+ RGT           
Sbjct: 357  AEDDDDDDDVDDEAGVPPVIASKPKDAPKEEPADNSPSKPAVTGTARGTLSTSKPSKGKR 416

Query: 353  XSGGDDAKAANGAPSKKXLKMDPHP 279
                ++ KAANGAP KK +K++  P
Sbjct: 417  KL-NEETKAANGAPPKK-VKIENEP 439



 Score = 85.5 bits (210), Expect(2) = e-143
 Identities = 41/63 (65%), Positives = 53/63 (84%)
 Frame = -3

Query: 201 PVTEDEIRAVLLQMAPVTTQELVGRFKARLKTAEDKGAFAAILQKISKIQKTGGHSYVVL 22
           PV+E+EIRAVL+Q  P+TTQ+LV +F+ARL+  EDK AFA IL++ISKIQKT   SYV+L
Sbjct: 478 PVSEEEIRAVLMQKTPLTTQDLVAKFRARLRCPEDKKAFADILKRISKIQKTNASSYVIL 537

Query: 21  RDK 13
           RD+
Sbjct: 538 RDR 540


>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Vitis vinifera]
          Length = 534

 Score =  509 bits (1310), Expect = e-141
 Identities = 275/432 (63%), Positives = 293/432 (67%), Gaps = 2/432 (0%)
 Frame = -1

Query: 1592 LKASCSGCGSPNELYGSNCKHMTLCLTCGKTMAEKRGKCYECGVPVTRLIREYNVRASSA 1413
            LK SCSGCGS  +LYGSNCKHMTLCL+CGKTMAE  GKCY+CG PVTRLIREYNVR +S+
Sbjct: 2    LKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYNVRTNSS 61

Query: 1412 SDKSYFIARFVTGLPNFSKKKNAENKWSLHKEGLQGRHVTDALREKYKNKPWLLEDETGQ 1233
             DK+YFI RFVTGLP FSKKKNA+NKWSLHKEGLQGR V+DALREKYKNKPWLLEDETGQ
Sbjct: 62   GDKNYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLLEDETGQ 121

Query: 1232 SQYHGQLEGAQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKN 1053
             QYHGQLEG+QSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR++ 
Sbjct: 122  YQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRRT 181

Query: 1052 ADGYERWMMKLANNGAAAFGEVERPDEKD-XXXXXXXXXXXXXXXAXXXXXXXXXXXXXX 876
            ADGY+RWMMK ANNG AAFGEVE+ D+K+                               
Sbjct: 182  ADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSDKAEEDE 241

Query: 875  XXXXXRKNRLRPNKSXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGNDP 696
                 RKNRL  NK                           DWEHEEIFTDDDEAVGNDP
Sbjct: 242  EEEAERKNRLGLNK-RSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAVGNDP 300

Query: 695  EEREDLAPEVPAPP-XXXXXXXXXXXXXXEGGLSTSGKELKKLLGKASGLNXXXXXXXXX 519
            EEREDLAPEVPAPP               EGGLS SGKELKKLLGKA+G+N         
Sbjct: 301  EEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMN--DSDAEDD 358

Query: 518  XXXXXXXXXXXSPVLAPKQKDVPKEEPVDNSPSKAAATGSVRGTPPXXXXXXXXXXSGGD 339
                       SPVLAPKQKDVPKEEP DNSP K +AT S R TPP          S GD
Sbjct: 359  DDDEEEDEIGLSPVLAPKQKDVPKEEPADNSPMK-SATASARSTPPTSKSSKGKRKSNGD 417

Query: 338  DAKAANGAPSKK 303
            D K  NG P KK
Sbjct: 418  DMKTTNGGPPKK 429



 Score = 97.4 bits (241), Expect = 2e-17
 Identities = 50/63 (79%), Positives = 56/63 (88%)
 Frame = -3

Query: 201 PVTEDEIRAVLLQMAPVTTQELVGRFKARLKTAEDKGAFAAILQKISKIQKTGGHSYVVL 22
           PVTEDEIRAVLLQ APVTTQ+LV +FKARLK+ EDK AFA IL++ISKIQKT G +YVVL
Sbjct: 472 PVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVL 531

Query: 21  RDK 13
           RDK
Sbjct: 532 RDK 534


>gb|EYU27712.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus guttatus]
          Length = 534

 Score =  437 bits (1124), Expect(2) = e-140
 Identities = 245/437 (56%), Positives = 276/437 (63%), Gaps = 1/437 (0%)
 Frame = -1

Query: 1610 MSFDLHLKASCSGCGSPNELYGSNCKHMTLCLTCGKTMAEKRGKCYECGVPVTRLIREYN 1431
            MS DL LK SCSGCGS  ELYGS CKH+TLC+ CGK+MAEKR KCYECG P+TRLIREYN
Sbjct: 1    MSIDLILKPSCSGCGSAVELYGSTCKHLTLCVKCGKSMAEKRAKCYECGTPITRLIREYN 60

Query: 1430 VRASSASDKSYFIARFVTGLPNFSKKKNAENKWSLHKEGLQGRHVTDALREKYKNKPWLL 1251
            VRASS+S+K+Y I RF TGLP F KK   +N W+  KEGLQGR VTD+LREK+KNKPWLL
Sbjct: 61   VRASSSSEKNYIIGRFATGLPTFKKKN--DNNWTFQKEGLQGRQVTDSLREKFKNKPWLL 118

Query: 1250 EDETGQSQYHGQLEGAQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1071
            EDETGQ QYHG  EG+QSATYYLLM+QGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 119  EDETGQFQYHGHFEGSQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 178

Query: 1070 KNRKKNADGYERWMMKLANNGAAAFGEVERPDEKDXXXXXXXXXXXXXXXAXXXXXXXXX 891
            KNR+K ADGY+RWMMK ANNG AAFGEVE+ D +                          
Sbjct: 179  KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDGE--GASGGGRGRKKSTGDDDEGNVSDR 236

Query: 890  XXXXXXXXXXRKNRLRPNKSXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEA 711
                      RK RL  NK                               E    DD EA
Sbjct: 237  GDEDEEEEASRKGRLGLNKKHADDDEEGPRGGDLDFDDDDIEKGDDWEHEEIFTDDD-EA 295

Query: 710  VGNDPEEREDLAPEVPAPP-XXXXXXXXXXXXXXEGGLSTSGKELKKLLGKASGLNXXXX 534
            VGNDPEEREDLAPE+PAPP               EGGLS SGKELKKLLG+++G++    
Sbjct: 296  VGNDPEEREDLAPEIPAPPEIKQDDDDEDEDGEEEGGLSKSGKELKKLLGRSNGMD--DS 353

Query: 533  XXXXXXXXXXXXXXXXSPVLAPKQKDVPKEEPVDNSPSKAAATGSVRGTPPXXXXXXXXX 354
                            SPVLAPK K+ PKEEP+DNSP K+  +G+ RGT P         
Sbjct: 354  DAEDDDDDDDDMEDDISPVLAPK-KEAPKEEPIDNSPLKSTTSGAGRGT-PNGSKSKSKR 411

Query: 353  XSGGDDAKAANGAPSKK 303
             S G+++K  NGAP KK
Sbjct: 412  KSNGEESKTTNGAPLKK 428



 Score = 91.7 bits (226), Expect(2) = e-140
 Identities = 53/98 (54%), Positives = 65/98 (66%)
 Frame = -3

Query: 306 KGXKDGPTSSHKSNNATIKXXXXXXXXXXXXXXXGPVTEDEIRAVLLQMAPVTTQELVGR 127
           K  KD   SS KS+  T                 GPVTE+EIRAVLLQ  PVTTQ+LV +
Sbjct: 436 KSVKDEIGSSSKSSAPTKGATPPAPSVSASAPPTGPVTEEEIRAVLLQKMPVTTQDLVAK 495

Query: 126 FKARLKTAEDKGAFAAILQKISKIQKTGGHSYVVLRDK 13
           FK+RLK  EDK AFAAIL++IS+IQKT G ++VVLR++
Sbjct: 496 FKSRLKLKEDKDAFAAILRRISRIQKTNGANFVVLRER 533


>gb|AAN04997.1| putative transcription initiation factor [Oryza sativa Japonica
            Group] gi|31430629|gb|AAP52517.1| mutant TFIIF-alpha,
            putative, expressed [Oryza sativa Japonica Group]
          Length = 532

 Score =  432 bits (1112), Expect(2) = e-140
 Identities = 242/448 (54%), Positives = 276/448 (61%), Gaps = 3/448 (0%)
 Frame = -1

Query: 1607 SFDLHLKASCSGCGSPNELYGSNCKHMTLCLTCGKTMAEKRGKCYECGVPVTRLIREYNV 1428
            S DL LKA+C GCGSP++LYG++CKH TLC +CGK+MA    +C  C  P+T LIREYNV
Sbjct: 3    SADLVLKAACEGCGSPSDLYGTSCKHTTLCSSCGKSMALSGARCLVCSAPITNLIREYNV 62

Query: 1427 RASSASDKSYFIARFVTGLPNFSKKKNAENKWSLHKEGLQGRHVTDALREKYKNKPWLLE 1248
            RA++ +DKS+ I RFVTGLP FSKKK+AENKWSLHKEGLQGR + + +REKY  KPW+LE
Sbjct: 63   RANATTDKSFSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPWILE 122

Query: 1247 DETGQSQYHGQLEGAQS--ATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEK 1074
            DETGQ QY GQ+EG+QS  ATYYLLMM GKEF A PAGSWYNF+K+AQYKQLTLEEAEEK
Sbjct: 123  DETGQYQYQGQMEGSQSSTATYYLLMMHGKEFHAYPAGSWYNFSKIAQYKQLTLEEAEEK 182

Query: 1073 MKNRKKNADGYERWMMKLANNGAAAFGEVERPDEKDXXXXXXXXXXXXXXXAXXXXXXXX 894
            M  RK +A GYERWMMK A NG AAFG   +  E                          
Sbjct: 183  MNKRKTSATGYERWMMKAATNGPAAFGSDVKKLE-PTNGTEKENARPKKGKNNEEGNNSD 241

Query: 893  XXXXXXXXXXXRKNRLRPNKSXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDE 714
                       RKNRL  NK                           DWEHEE FTDDDE
Sbjct: 242  KGEEDEEEEAARKNRLALNKK--SMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDDE 299

Query: 713  AVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXEGGLSTSGKELKKLLGKASGLNXXXX 534
            AV  DPEER DLAPE+PAPP              EGGLS SGKELKKLLGKA+GLN    
Sbjct: 300  AVDIDPEERADLAPEIPAPP---EIKQDDEENEEEGGLSKSGKELKKLLGKAAGLN---E 353

Query: 533  XXXXXXXXXXXXXXXXSPVLAPKQKDVPKEEPVDNSPSKAAATGSVRGTPPXXXXXXXXX 354
                            SPVLAPKQKD PK+EPVDNSP+K   +G  RGTPP         
Sbjct: 354  SDADEDDEDDDQEDESSPVLAPKQKDQPKDEPVDNSPAKPTPSGHARGTPPASKSKQKRK 413

Query: 353  XSGGDDAKAANGAPSKK-XLKMDPHPPI 273
              GGDD+KA+ GA SKK  ++ D  P +
Sbjct: 414  SGGGDDSKASGGAASKKAKVESDTKPSV 441



 Score = 96.3 bits (238), Expect(2) = e-140
 Identities = 48/62 (77%), Positives = 54/62 (87%)
 Frame = -3

Query: 201 PVTEDEIRAVLLQMAPVTTQELVGRFKARLKTAEDKGAFAAILQKISKIQKTGGHSYVVL 22
           PVTEDEIR VLL +APVTTQ+LV RFK+RL+  EDK AFA IL+KISKIQKT GH+YVVL
Sbjct: 468 PVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKIQKTNGHNYVVL 527

Query: 21  RD 16
           RD
Sbjct: 528 RD 529


>gb|AAX95773.1| putative transcription initiation factor [Oryza sativa Japonica
            Group] gi|78708004|gb|ABB46979.1| mutant TFIIF-alpha,
            putative, expressed [Oryza sativa Japonica Group]
          Length = 531

 Score =  432 bits (1112), Expect(2) = e-140
 Identities = 242/448 (54%), Positives = 276/448 (61%), Gaps = 3/448 (0%)
 Frame = -1

Query: 1607 SFDLHLKASCSGCGSPNELYGSNCKHMTLCLTCGKTMAEKRGKCYECGVPVTRLIREYNV 1428
            S DL LKA+C GCGSP++LYG++CKH TLC +CGK+MA    +C  C  P+T LIREYNV
Sbjct: 3    SADLVLKAACEGCGSPSDLYGTSCKHTTLCSSCGKSMALSGARCLVCSAPITNLIREYNV 62

Query: 1427 RASSASDKSYFIARFVTGLPNFSKKKNAENKWSLHKEGLQGRHVTDALREKYKNKPWLLE 1248
            RA++ +DKS+ I RFVTGLP FSKKK+AENKWSLHKEGLQGR + + +REKY  KPW+LE
Sbjct: 63   RANATTDKSFSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPWILE 122

Query: 1247 DETGQSQYHGQLEGAQS--ATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEK 1074
            DETGQ QY GQ+EG+QS  ATYYLLMM GKEF A PAGSWYNF+K+AQYKQLTLEEAEEK
Sbjct: 123  DETGQYQYQGQMEGSQSSTATYYLLMMHGKEFHAYPAGSWYNFSKIAQYKQLTLEEAEEK 182

Query: 1073 MKNRKKNADGYERWMMKLANNGAAAFGEVERPDEKDXXXXXXXXXXXXXXXAXXXXXXXX 894
            M  RK +A GYERWMMK A NG AAFG   +  E                          
Sbjct: 183  MNKRKTSATGYERWMMKAATNGPAAFGSDVKKLE-PTNGTEKENARPKKGKNNEEGNNSD 241

Query: 893  XXXXXXXXXXXRKNRLRPNKSXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDE 714
                       RKNRL  NK                           DWEHEE FTDDDE
Sbjct: 242  KGEEDEEEEAARKNRLALNKK--SMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDDE 299

Query: 713  AVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXEGGLSTSGKELKKLLGKASGLNXXXX 534
            AV  DPEER DLAPE+PAPP              EGGLS SGKELKKLLGKA+GLN    
Sbjct: 300  AVDIDPEERADLAPEIPAPP---EIKQDDEENEEEGGLSKSGKELKKLLGKAAGLN---- 352

Query: 533  XXXXXXXXXXXXXXXXSPVLAPKQKDVPKEEPVDNSPSKAAATGSVRGTPPXXXXXXXXX 354
                            SPVLAPKQKD PK+EPVDNSP+K   +G  RGTPP         
Sbjct: 353  ESDADEDDEDDDEDESSPVLAPKQKDQPKDEPVDNSPAKPTPSGHARGTPPASKSKQKRK 412

Query: 353  XSGGDDAKAANGAPSKK-XLKMDPHPPI 273
              GGDD+KA+ GA SKK  ++ D  P +
Sbjct: 413  SGGGDDSKASGGAASKKAKVESDTKPSV 440



 Score = 96.3 bits (238), Expect(2) = e-140
 Identities = 48/62 (77%), Positives = 54/62 (87%)
 Frame = -3

Query: 201 PVTEDEIRAVLLQMAPVTTQELVGRFKARLKTAEDKGAFAAILQKISKIQKTGGHSYVVL 22
           PVTEDEIR VLL +APVTTQ+LV RFK+RL+  EDK AFA IL+KISKIQKT GH+YVVL
Sbjct: 467 PVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKIQKTNGHNYVVL 526

Query: 21  RD 16
           RD
Sbjct: 527 RD 528