BLASTX nr result
ID: Cocculus23_contig00002594
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00002594
(2667 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI34075.3| unnamed protein product [Vitis vinifera] 455 e-148
ref|XP_002270102.1| PREDICTED: uncharacterized protein LOC100266... 453 e-147
ref|XP_006838503.1| hypothetical protein AMTR_s00002p00175460 [A... 389 e-126
ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232... 347 e-115
ref|XP_002302501.2| hypothetical protein POPTR_0002s14050g [Popu... 347 e-115
ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu... 349 e-115
gb|EXB38373.1| Heterogeneous nuclear ribonucleoprotein Q [Morus ... 347 e-114
ref|XP_006338911.1| PREDICTED: nucleolin-like isoform X1 [Solanu... 348 e-114
ref|XP_006338915.1| PREDICTED: nucleolin-like isoform X5 [Solanu... 348 e-114
ref|XP_007220623.1| hypothetical protein PRUPE_ppa002214mg [Prun... 347 e-114
ref|NP_001275825.1| RNA recognition motif protein 1 [Citrus sine... 346 e-113
ref|XP_006445454.1| hypothetical protein CICLE_v10018944mg [Citr... 346 e-113
ref|XP_007052382.1| RNA-binding family protein isoform 2 [Theobr... 345 e-113
ref|XP_007052381.1| RNA-binding family protein isoform 1 [Theobr... 343 e-112
ref|XP_006375182.1| hypothetical protein POPTR_0014s05040g [Popu... 339 e-112
ref|XP_004229726.1| PREDICTED: uncharacterized protein LOC101251... 337 e-112
ref|XP_006338909.1| PREDICTED: nucleolin-like isoform X3 [Solanu... 341 e-112
ref|XP_006354662.1| PREDICTED: heterogeneous nuclear ribonucleop... 337 e-111
ref|XP_006338907.1| PREDICTED: nucleolin-like isoform X1 [Solanu... 339 e-111
ref|XP_006354663.1| PREDICTED: heterogeneous nuclear ribonucleop... 336 e-111
>emb|CBI34075.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 455 bits (1170), Expect(2) = e-148
Identities = 261/530 (49%), Positives = 321/530 (60%), Gaps = 30/530 (5%)
Frame = -1
Query: 2124 VNGKQCGVCPSQDSDTLFIGNICKTWTKEAFKEKLAKYGVNNFEDLTLVEDVKNIGMNRG 1945
+NGKQCGV PSQDSDTLF+GNICKTWTK A K+KLA YGV+ +EDLTLVED KN GMNRG
Sbjct: 252 INGKQCGVAPSQDSDTLFVGNICKTWTKVAVKDKLAYYGVDKYEDLTLVEDTKNEGMNRG 311
Query: 1944 FAFLEFSSRADALDACKHLQKMDVVFGTDRLAKVAFADTFIEPDDEIMAQVKKVFIDGLH 1765
FAFL+FSSRADAL+ACK LQK DVVFGTDR A+VAFADTFIEPDDEIM+QV+ +F+DGL
Sbjct: 312 FAFLDFSSRADALEACKRLQKRDVVFGTDRTARVAFADTFIEPDDEIMSQVRTIFLDGLP 371
Query: 1764 AAWDEDRVRKHLRKFGRIEMVELARNMPAAKRTDFGFVTFDTHDAAVACVEGVNSAELCD 1585
A WDEDRVR +L+KFGRIE +ELARNMPAAKRTDFGFVTFDTHD+AVACV+ +N++EL D
Sbjct: 372 ATWDEDRVRDYLKKFGRIEKIELARNMPAAKRTDFGFVTFDTHDSAVACVDSINNSELVD 431
Query: 1584 GDDKVKVRARLTRPRQRGKLGNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGGQ 1405
G+ VKVRARL+RPRQRGK H G GG+
Sbjct: 432 GERLVKVRARLSRPRQRGKSAKHARGGYLVAQGSGRGFKAPWGSSSSRMDSWKFTGRGGR 491
Query: 1404 GRQ----YVGDFKQSRGPWGRYTSINLAFDGAESRRTWTSPQRPLGQSSPGTAYRKGTST 1237
Q Y G K+ GP R++ + + SRR + SP+ G+ SP Y K ++
Sbjct: 492 SMQTRGAYDGGLKRPVGPRDRHSMMEMVPTRVGSRRRFPSPESSFGRRSP--VYEKSSTK 549
Query: 1236 REHIRPDEHFPRPSEFVARAPAERHLSYRDIYPSRESGYMGNPSQSGSRGAAHRPPPRHS 1057
RE+I+ DE F RP+ F AR P ER Y+D Y SR S Y+ +P ++ SR A HR P +
Sbjct: 550 REYIQRDESFSRPAVF-ARDPTERRY-YKDNYSSRGSEYLDSPPRNVSRAAGHR-APLYE 606
Query: 1056 KESYGRHMEQ--XXXXXXXXXXXXXXXSKRPYLSVEEFHSDYIESMHRQPRARHDYRGAN 883
+ Y R++E+ SKR + ++EE HS Y E R RAR DY G+N
Sbjct: 607 DDDYDRYLERPTNYHDGHRHDYGSISSSKRSHSAMEEVHSRYAEPPIRHSRARFDYGGSN 666
Query: 882 MDMVYGDTAYGSES------------------------ARXXXXXXXXXXXXXXXFSDGT 775
+ Y D YGSES +R +D
Sbjct: 667 SGLPY-DDHYGSESTSERRMGRGSRLGYDGGMRSSSGHSRGMYETRTSTTGYRRVLADDI 725
Query: 774 SRGDTGRLYSSYERDYNSRDYASSETYGGADPYSYPNSSRRMNNGYANGR 625
SRG+ +YSSY+R+Y SRDY S + G Y SRRMN+GY +GR
Sbjct: 726 SRGNEEGMYSSYDREYMSRDYMPSRSDLGTGSYPSDYPSRRMNDGYLSGR 775
Score = 100 bits (249), Expect(2) = e-148
Identities = 46/62 (74%), Positives = 54/62 (87%)
Frame = -2
Query: 2330 GGLDRDAVEEDLWKVFSEVGDITEVRLMKNPLTKKNKGFGFVRFATTEQAKRAVNELKHP 2151
GGLDRD E+DL+ F +VGDITEVRLMKN LT+KNKGF F+RFAT EQA+RAVNELKHP
Sbjct: 191 GGLDRDVTEDDLFHFFRQVGDITEVRLMKNALTQKNKGFAFIRFATVEQARRAVNELKHP 250
Query: 2150 MV 2145
++
Sbjct: 251 VI 252
>ref|XP_002270102.1| PREDICTED: uncharacterized protein LOC100266805 [Vitis vinifera]
Length = 719
Score = 453 bits (1165), Expect(2) = e-147
Identities = 264/527 (50%), Positives = 321/527 (60%), Gaps = 27/527 (5%)
Frame = -1
Query: 2124 VNGKQCGVCPSQDSDTLFIGNICKTWTKEAFKEKLAKYGVNNFEDLTLVEDVKNIGMNRG 1945
+NGKQCGV PSQDSDTLF+GNICKTWTK A K+KLA YGV+ +EDLTLVED KN GMNRG
Sbjct: 191 INGKQCGVAPSQDSDTLFVGNICKTWTKVAVKDKLAYYGVDKYEDLTLVEDTKNEGMNRG 250
Query: 1944 FAFLEFSSRADALDACKHLQKMDVVFGTDRLAKVAFADTFIEPDDEIMAQVKKVFIDGLH 1765
FAFL+FSSRADAL+ACK LQK DVVFGTDR A+VAFADTFIEPDDEIM+QV+ +F+DGL
Sbjct: 251 FAFLDFSSRADALEACKRLQKRDVVFGTDRTARVAFADTFIEPDDEIMSQVRTIFLDGLP 310
Query: 1764 AAWDEDRVRKHLRKFGRIEMVELARNMPAAKRTDFGFVTFDTHDAAVACVEGVNSAELCD 1585
A WDEDRVR +L+KFGRIE +ELARNMPAAKRTDFGFVTFDTHD+AVACV+ +N++EL D
Sbjct: 311 ATWDEDRVRDYLKKFGRIEKIELARNMPAAKRTDFGFVTFDTHDSAVACVDSINNSELVD 370
Query: 1584 GDDKVKVRARLTRPRQRGKLGNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGGQ 1405
G+ VKVRARL+RPRQRGK H G GG+
Sbjct: 371 GERLVKVRARLSRPRQRGKSAKHARGGYLVAQGSGRGFKAPWGSSSSRMDSWKFTGRGGR 430
Query: 1404 GRQ----YVGDFKQSRGPWGRYTSINLAFDGAESRRTWTSPQRPLGQSSPGTAYRKGTST 1237
Q Y G K+ GP R++ + + SRR + SP+ G+ SP Y K ++
Sbjct: 431 SMQTRGAYDGGLKRPVGPRDRHSMMEMVPTRVGSRRRFPSPESSFGRRSP--VYEKSSTK 488
Query: 1236 REHIRPDEHFPRPSEFVARAPAERHLSYRDIYPSRESGYMGNPSQSGSRGAAHRPPPRHS 1057
RE+I+ DE F RP+ F AR P ER Y+D Y SR S Y+ +P ++ SR A HR P +
Sbjct: 489 REYIQRDESFSRPAVF-ARDPTERRY-YKDNYSSRGSEYLDSPPRNVSRAAGHR-APLYE 545
Query: 1056 KESYGRHMEQ--XXXXXXXXXXXXXXXSKRPYLSVEEFHSDYIESMHRQPRARHDYRGAN 883
+ Y R++E+ SKR + ++EE HS Y E R RAR DY G+N
Sbjct: 546 DDDYDRYLERPTNYHDGHRHDYGSISSSKRSHSAMEEVHSRYAEPPIRHSRARFDYGGSN 605
Query: 882 MDMVYGDTAYGSESA--RXXXXXXXXXXXXXXXFSDGTSRG--------------DTGR- 754
+ Y D YGSES R S G SRG D R
Sbjct: 606 SGLPY-DDHYGSESTSERRMGRGSRLGYDGGMRSSSGHSRGMYETRTSTTGYRRDDISRG 664
Query: 753 ----LYSSYERDYNSRDYASSETYGGADPYSYPNSSRRMNNGYANGR 625
+YSSY+R+Y SRDY S + G Y SRRMN+GY +GR
Sbjct: 665 NEEGMYSSYDREYMSRDYMPSRSDLGTGSYPSDYPSRRMNDGYLSGR 711
Score = 100 bits (249), Expect(2) = e-147
Identities = 46/62 (74%), Positives = 54/62 (87%)
Frame = -2
Query: 2330 GGLDRDAVEEDLWKVFSEVGDITEVRLMKNPLTKKNKGFGFVRFATTEQAKRAVNELKHP 2151
GGLDRD E+DL+ F +VGDITEVRLMKN LT+KNKGF F+RFAT EQA+RAVNELKHP
Sbjct: 130 GGLDRDVTEDDLFHFFRQVGDITEVRLMKNALTQKNKGFAFIRFATVEQARRAVNELKHP 189
Query: 2150 MV 2145
++
Sbjct: 190 VI 191
>ref|XP_006838503.1| hypothetical protein AMTR_s00002p00175460 [Amborella trichopoda]
gi|548841009|gb|ERN01072.1| hypothetical protein
AMTR_s00002p00175460 [Amborella trichopoda]
Length = 805
Score = 389 bits (999), Expect(2) = e-126
Identities = 246/534 (46%), Positives = 291/534 (54%), Gaps = 28/534 (5%)
Frame = -1
Query: 2124 VNGKQCGVCPSQDSDTLFIGNICKTWTKEAFKEKLAKYGVNNFEDLTLVEDVKNIGMNRG 1945
VNGKQCGV PSQDSDTLF+GNICKTWTKEA KEKL YG+ N ED+TLVED N GMNRG
Sbjct: 280 VNGKQCGVSPSQDSDTLFLGNICKTWTKEALKEKLKHYGIENIEDMTLVEDSNNEGMNRG 339
Query: 1944 FAFLEFSSRADALDACKHLQKMDVVFGTDRLAKVAFADTFIEPDDEIMAQVKKVFIDGLH 1765
FAFLEF+SR++A++A K LQK DVVFGTDR AKVAFAD+FIEPDDEIMAQVK VFIDG+
Sbjct: 340 FAFLEFASRSEAMEAYKRLQKRDVVFGTDRTAKVAFADSFIEPDDEIMAQVKTVFIDGIP 399
Query: 1764 AAWDEDRVRKHLRKFGRIEMVELARNMPAAKRTDFGFVTFDTHDAAVACVEGVNSAELCD 1585
+WDEDRV++ L+KFG IE VELARNMP+AKR DFGFVTFDTHDAAVACVEG+N+AEL +
Sbjct: 400 PSWDEDRVKELLKKFGDIEKVELARNMPSAKRNDFGFVTFDTHDAAVACVEGINNAELGE 459
Query: 1584 GDDKVKVRARLTRPRQRGKLGNH-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1420
GD KVKVRARL+RP QRG++
Sbjct: 460 GDSKVKVRARLSRPHQRGRVSKRGARGDFKVGRGGMRGAKAPWAGRGAPRLESRRFPARV 519
Query: 1419 GHGGQGRQYVGDFKQSRGPWGRYTSINLAFDGAESRRTWTSPQRPLGQSSPGTAYRKGTS 1240
G GR + R P G +A E R P R + P Y K +S
Sbjct: 520 PRGLGGRGAPIPSRALRRPLGFRDRRPVAPVPPERVRHLPPPGRSYDRRPPVPPYPK-SS 578
Query: 1239 TREHIRPDEHFPRPS----EFVARAPAERHLSYRDIYPSRESGYMGNPSQSGSRGAAHRP 1072
R+H R D+ P S EFV RAP ER SYRD YPSR S Y + +S SRGAA RP
Sbjct: 579 KRDHSRRDDLPPPRSRAAPEFVPRAPVERRPSYRDDYPSRGSAYSDSAPRSASRGAARRP 638
Query: 1071 PPRHSKESYGRHMEQ--XXXXXXXXXXXXXXXSKRPYLSVEEFHSDYIESMHRQPRARHD 898
P E YGR +++ SKRPY S+ + Y ++ R RAR D
Sbjct: 639 YP---DEGYGRRLDRPPSYREGRGREYDSISGSKRPYSSLSDATPRYADTSVRHSRARLD 695
Query: 897 YRGANMDMVYGDTAYGS-----------------ESARXXXXXXXXXXXXXXXFSDGTSR 769
Y YGD ++G S + S
Sbjct: 696 YGVGGGASQYGDGSFGETARLGRGSHLGYGGSSRSSISGHDSHGMYDSRHGMGYGGSVSN 755
Query: 768 GDTGRLYSSYERDYNSRDYASSETYGGADPYSYPNSSRRMNNGYANGRRPRTYY 607
+ G +YSS Y S DY G+ YS SSR ++ GY G +YY
Sbjct: 756 SEVGGMYSS---SYGS-DYLPGGPDVGSGSYSSIYSSRGLSGGYMGGSGSGSYY 805
Score = 93.6 bits (231), Expect(2) = e-126
Identities = 45/62 (72%), Positives = 52/62 (83%)
Frame = -2
Query: 2330 GGLDRDAVEEDLWKVFSEVGDITEVRLMKNPLTKKNKGFGFVRFATTEQAKRAVNELKHP 2151
GGLD++A EEDL KVFSEVG++ EVRLM N TKKNKGF F+RFAT E AKRAV ELK+P
Sbjct: 219 GGLDKEATEEDLLKVFSEVGEVAEVRLMMNLQTKKNKGFAFIRFATVEHAKRAVTELKNP 278
Query: 2150 MV 2145
+V
Sbjct: 279 VV 280
>ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
gi|297734640|emb|CBI16691.3| unnamed protein product
[Vitis vinifera]
Length = 812
Score = 347 bits (889), Expect(2) = e-115
Identities = 238/529 (44%), Positives = 289/529 (54%), Gaps = 23/529 (4%)
Frame = -1
Query: 2124 VNGKQCGVCPSQDSDTLFIGNICKTWTKEAFKEKLAKYGVNNFEDLTLVEDVKNIGMNRG 1945
VNGKQCGV PSQDSDTLF+GNICKTWTKEA KEKL YGV N EDLTLVED N GMNRG
Sbjct: 298 VNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDLTLVEDSNNEGMNRG 357
Query: 1944 FAFLEFSSRADALDACKHLQKMDVVFGTDRLAKVAFADTFIEPDDEIMAQVKKVFIDGLH 1765
FAFLEFSSR+DA+DA K LQK DVVFG DR AKV+FAD+FI+P DEIMAQVK VFIDGL
Sbjct: 358 FAFLEFSSRSDAMDAFKRLQKRDVVFGVDRTAKVSFADSFIDPGDEIMAQVKTVFIDGLP 417
Query: 1764 AAWDEDRVRKHLRKFGRIEMVELARNMPAAKRTDFGFVTFDTHDAAVACVEGVNSAELCD 1585
A+WDEDRVR+ L+K+G IE +ELARNMP+AKR DFGFVTFDTHDAAV C + +N+AEL +
Sbjct: 418 ASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNAELGE 477
Query: 1584 GDDKVKVRARLTRPRQRGKLGNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGGQ 1405
G++K KVRARL+RP QRGK G H G G
Sbjct: 478 GENKAKVRARLSRPLQRGK-GKHISRGDFRPGRGGPVRGVRGSWARPALRSFPGRGARGL 536
Query: 1404 G-RQYVGDFKQSRGPWGRYTSINLAFDGAESRRTWTSPQRPLGQSSPGTAYRKGTSTREH 1228
G R K+ G R + + G R P R + +P AY K R++
Sbjct: 537 GPRLPPAAVKRPIGFRDRRPVMAMPPRG----RPLPPPSRSYDRRAPVPAYPKPNLKRDY 592
Query: 1227 IRPDE--HFPRPS-EFVARAPAERHLSYRDIYPSRESGYMGNPSQSGSRGAAHRPPPRHS 1057
R +E RP+ ++ +R ER SYRD Y +R SGY P ++ SR AA R +
Sbjct: 593 GRREEVPLRSRPAVDYGSRVAPERRPSYRDDYATRGSGYSDIP-RNTSRTAARR---TYE 648
Query: 1056 KESYGRHMEQ----XXXXXXXXXXXXXXXSKRPYLSVEEFHSDYIESMHRQPRARHDYRG 889
++YG+ E+ SKRPY ++++ Y ++ RQ RAR DY
Sbjct: 649 DDAYGQRFERPPPPSYREGRPRDYDSIAGSKRPYGALDDVPPRYADASVRQSRARLDYEM 708
Query: 888 ANMDMVYGDTAYGSESARXXXXXXXXXXXXXXXFSDG--TSR------------GDTGRL 751
+ YGD AYG R S G +SR D G +
Sbjct: 709 SAGASQYGD-AYGDRLGRSNLGYGGSRSSMSSQDSHGLYSSRQGMGYGGGSFGGSDVGGM 767
Query: 750 YSSYERDYNSRDYASSETYGGADPYSYPNSSRRM-NNGYANGRRPRTYY 607
YSS Y S DY G YS SSR + + Y +YY
Sbjct: 768 YSS---SYGS-DYMPRGADVGGSSYSSLYSSRGVGGSSYMGSGGSGSYY 812
Score = 99.4 bits (246), Expect(2) = e-115
Identities = 47/62 (75%), Positives = 55/62 (88%)
Frame = -2
Query: 2330 GGLDRDAVEEDLWKVFSEVGDITEVRLMKNPLTKKNKGFGFVRFATTEQAKRAVNELKHP 2151
GGLD+DA E+DL KVFS+VG++TEVRLM NP TKKNKGF F+RFAT EQAKRAV ELK+P
Sbjct: 237 GGLDKDATEDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKRAVTELKNP 296
Query: 2150 MV 2145
+V
Sbjct: 297 VV 298
>ref|XP_002302501.2| hypothetical protein POPTR_0002s14050g [Populus trichocarpa]
gi|550344986|gb|EEE81774.2| hypothetical protein
POPTR_0002s14050g [Populus trichocarpa]
Length = 784
Score = 347 bits (889), Expect(2) = e-115
Identities = 234/514 (45%), Positives = 281/514 (54%), Gaps = 24/514 (4%)
Frame = -1
Query: 2124 VNGKQCGVCPSQDSDTLFIGNICKTWTKEAFKEKLAKYGVNNFEDLTLVEDVKNIGMNRG 1945
+NGKQCGV PSQDSDTLF+GNICKTWTKEA KEKL YGV N +DLTLVED N GMNRG
Sbjct: 276 INGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVKDLTLVEDSNNAGMNRG 335
Query: 1944 FAFLEFSSRADALDACKHLQKMDVVFGTDRLAKVAFADTFIEPDDEIMAQVKKVFIDGLH 1765
FAFLEFSSR+DA+DA K LQK DV+FG DR AKV+FAD+FI+P DEIMAQVK VFIDGL
Sbjct: 336 FAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDEIMAQVKTVFIDGLP 395
Query: 1764 AAWDEDRVRKHLRKFGRIEMVELARNMPAAKRTDFGFVTFDTHDAAVACVEGVNSAELCD 1585
A+WDEDRVR L+K+G IE +ELARNMP+A+R DFGFVTFDTHDAAV C + +N+AEL +
Sbjct: 396 ASWDEDRVRVLLKKYGEIEKIELARNMPSARRKDFGFVTFDTHDAAVTCAKSINNAELGE 455
Query: 1584 GDDKVKVRARLTRPRQRGKLGNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGGQ 1405
GD+K KVRARL+RP QRGK G H G
Sbjct: 456 GDNKAKVRARLSRPLQRGK-GKHLSRGDFRPGYGASRVVKGPWVRPVPHSYSTRPVRGIA 514
Query: 1404 GRQYVGDFKQSRGPWGRYTSINLAFDGAESRRTWTSPQRPLGQSSPGTAYRKGTSTREHI 1225
R K S G R + R P R + P +Y K RE+
Sbjct: 515 TRAPPFSLKSSTGLRERRPPV---MSMPARSRPLAPPSRSFERRPPPPSYAKSLK-REYG 570
Query: 1224 RPDEHFP---RPS-EFVARAPAERHLSYRDIYPSRESGYMGNPSQSGSRGAAHRP----- 1072
R DE P RP+ ++ R+ ER SYRD Y SR + Y P +S SR +A R
Sbjct: 571 RRDEPPPSRSRPAVDYDPRSIPERRPSYRDEYSSRGTSYADLP-RSTSRMSARRAYADDG 629
Query: 1071 -------PPRHSKESYGRHMEQXXXXXXXXXXXXXXXSKRPYLSVEEFHSDYIESMHRQP 913
PP + +E +GR + SKRPY ++++ Y ++ R
Sbjct: 630 YSQRYERPPPNYREGHGRDYDS------------VAGSKRPYPAMDDIPPRYADAGVRHS 677
Query: 912 RARHDYRGANMDMVYGDTAYGSESARXXXXXXXXXXXXXXXFSDG--TSR-----GDTGR 754
R R DY + YGD AYG R S G +SR G+ G
Sbjct: 678 RPRLDYELGSSASQYGD-AYGDRLGRSAAGYGGSRSSISSQDSHGMYSSRQGSYGGNDGG 736
Query: 753 LY-SSYERDYNSRDYASSETYGGADPYSYPNSSR 655
+Y SSY DY SR S GG+ YS SSR
Sbjct: 737 MYSSSYGGDYMSR----SGDVGGSS-YSSMYSSR 765
Score = 97.8 bits (242), Expect(2) = e-115
Identities = 45/62 (72%), Positives = 54/62 (87%)
Frame = -2
Query: 2330 GGLDRDAVEEDLWKVFSEVGDITEVRLMKNPLTKKNKGFGFVRFATTEQAKRAVNELKHP 2151
GGLD+DA E+DL K+FS VG++TEVRLM NP TKKNKGF F+RFAT EQAKRAV ELK+P
Sbjct: 215 GGLDKDATEDDLRKIFSRVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKRAVTELKNP 274
Query: 2150 MV 2145
++
Sbjct: 275 VI 276
>ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis]
gi|223534154|gb|EEF35870.1| RNA binding protein, putative
[Ricinus communis]
Length = 784
Score = 349 bits (895), Expect(2) = e-115
Identities = 239/550 (43%), Positives = 296/550 (53%), Gaps = 44/550 (8%)
Frame = -1
Query: 2124 VNGKQCGVCPSQDSDTLFIGNICKTWTKEAFKEKLAKYGVNNFEDLTLVEDVKNIGMNRG 1945
+NGKQCGV PSQDSDTLF+GNICKTWTKEA KEKL YGV N ED+TLVED N GMNRG
Sbjct: 279 INGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDVTLVEDSNNEGMNRG 338
Query: 1944 FAFLEFSSRADALDACKHLQKMDVVFGTDRLAKVAFADTFIEPDDEIMAQVKKVFIDGLH 1765
FAFLEFSSR+DA+DA K LQK DV+FG DR AKV+FAD+FI+P DEIMAQVK VF+DGL
Sbjct: 339 FAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGLP 398
Query: 1764 AAWDEDRVRKHLRKFGRIEMVELARNMPAAKRTDFGFVTFDTHDAAVACVEGVNSAELCD 1585
A+WDEDRVR+ L+KFG IE +ELARNMP+AKR DFGFVTFD+HDAAV C + +N+AEL +
Sbjct: 399 ASWDEDRVRELLKKFGEIEKIELARNMPSAKRKDFGFVTFDSHDAAVTCAKSINNAELGE 458
Query: 1584 GDDKVKVRARLTRPRQRGKLGNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGGQ 1405
GD+K KVRARL+RP QRGK G H +GG
Sbjct: 459 GDNKAKVRARLSRPLQRGK-GKH------------------------ASRADFRSWYGG- 492
Query: 1404 GRQYVGDFKQSRGPWGR----------YTSINLAFDGAESR----------RTWTSPQRP 1285
+ +RGPW R TS+ + R R P R
Sbjct: 493 --------RTARGPWVRPVRGIASRAAPTSVKRHVGLRDRRPPVMSMPVRGRPLPPPNRT 544
Query: 1284 LGQSSPGTAYRKGTSTREHIRPDEHFP----RPSEFVARAPAERHLSYRDIYPSRESGYM 1117
+ +P +Y K + R++ R +E P P ++ +R+ AER SYRD Y SR SGY
Sbjct: 545 YDRRAPAPSYPKSSLKRDYGRREELPPPRSRAPVDYSSRSVAERRQSYRDDYSSRGSGYS 604
Query: 1116 GNPSQSGSRGAAHRPPPRHSKESYGRHMEQ---XXXXXXXXXXXXXXXSKRPYLSVEEFH 946
P + SR +A R + + YG+ +E+ SKRPY ++++
Sbjct: 605 DIP-RGTSRSSARR---AYVDDGYGQRLERHPPSYREGRARDYDSISGSKRPYSAMDDVP 660
Query: 945 SDYIE--SMHRQPRARHDYRGANMDMVYGDTAYGSESARXXXXXXXXXXXXXXXFSDG-- 778
Y + + R RAR DY YGD AYG R S G
Sbjct: 661 PRYADGGAGTRHSRARLDYELGPSASQYGD-AYGDRIGRSSVGYGGSRSSLSSQDSHGLY 719
Query: 777 TSR-----------GDTGRLY-SSYERDYNSRDYASSETYGGADPYSYPNSSRRM-NNGY 637
TSR D G +Y SSY DY R S+ G+ YS SSR M ++ Y
Sbjct: 720 TSRQGMGYGGSYGANDVGGMYQSSYGGDYMPR---GSDV--GSRSYSSIYSSRGMGSSNY 774
Query: 636 ANGRRPRTYY 607
+YY
Sbjct: 775 MGSGGSGSYY 784
Score = 94.7 bits (234), Expect(2) = e-115
Identities = 43/62 (69%), Positives = 54/62 (87%)
Frame = -2
Query: 2330 GGLDRDAVEEDLWKVFSEVGDITEVRLMKNPLTKKNKGFGFVRFATTEQAKRAVNELKHP 2151
GGLD+DA E+DL KVF+ VG++TEVRLM NP TKKNKGF F+RF+T EQAK+AV ELK+P
Sbjct: 218 GGLDKDATEDDLRKVFTRVGEVTEVRLMMNPQTKKNKGFAFLRFSTVEQAKKAVTELKNP 277
Query: 2150 MV 2145
++
Sbjct: 278 VI 279
>gb|EXB38373.1| Heterogeneous nuclear ribonucleoprotein Q [Morus notabilis]
Length = 791
Score = 347 bits (891), Expect(2) = e-114
Identities = 222/501 (44%), Positives = 268/501 (53%), Gaps = 32/501 (6%)
Frame = -1
Query: 2124 VNGKQCGVCPSQDSDTLFIGNICKTWTKEAFKEKLAKYGVNNFEDLTLVEDVKNIGMNRG 1945
+ GKQCGV PSQDSDTLF+GNICKTW+KEA KEKL YGVNN ED+TLVED N GMNRG
Sbjct: 276 IKGKQCGVTPSQDSDTLFLGNICKTWSKEALKEKLKHYGVNNVEDVTLVEDSNNDGMNRG 335
Query: 1944 FAFLEFSSRADALDACKHLQKMDVVFGTDRLAKVAFADTFIEPDDEIMAQVKKVFIDGLH 1765
FAFLEFSSR++A+DA K LQK DVVFG DR AKV+FAD+FI+P DEIMAQVK VF+DGL
Sbjct: 336 FAFLEFSSRSEAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGLP 395
Query: 1764 AAWDEDRVRKHLRKFGRIEMVELARNMPAAKRTDFGFVTFDTHDAAVACVEGVNSAELCD 1585
A WDEDRVR L+K+G I +ELARNMP+AKR DFGFVTFDTHDAAV C + +N+ EL +
Sbjct: 396 ATWDEDRVRWLLKKYGEIVKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNVELGE 455
Query: 1584 GDDKVKVRARLTRPRQRGKLGNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGGQ 1405
G +K KVRARL+RP Q+GK G H G
Sbjct: 456 GGNKAKVRARLSRPLQKGK-GRHVARGDFRSSRGSGRVVKGSWSHPSPRSLPMRGLRGAG 514
Query: 1404 GRQYVGDFKQSRGPWGRYTSINLAFDGAESRRTWTSPQRPLGQSSPGTAYRKGTSTREHI 1225
R K+ G R +++ R P R + +P ++Y K + RE+
Sbjct: 515 SRIPPPSVKRPAGFRDRRPVMSVPV----RARPLAPPARSYDRRAPVSSYPKSSLKREYS 570
Query: 1224 RPDEHFPRPSEFVA----RAPAERHLSYRDIYPSRESGYMGNPSQSGSRGAAHR------ 1075
R DE P S VA R ER SYRD Y SR SGY +P +S SR +A R
Sbjct: 571 RRDEILPPRSRAVADYGSRVVHERRPSYRDDYSSRASGY-SDPPRSTSRTSARRAYVDDG 629
Query: 1074 -----------PPPRHSKESYGRHMEQXXXXXXXXXXXXXXXSKRPYLSVEEFHSDYIES 928
PPP +E R + SKRPY S+++ Y ++
Sbjct: 630 YGPRFERPPPPPPPPSYREGRARDYDS------------VSGSKRPYSSMDDVPPRYADA 677
Query: 927 MHRQPRARHDYR----GANMDMVYGD------TAYGSESARXXXXXXXXXXXXXXXFSDG 778
RQ RAR DY G++ YGD YGS
Sbjct: 678 SVRQSRARLDYEYGSGGSHYGDAYGDRLGRSNLGYGSSRTSQDSHGLYSSRQGMGYGEGS 737
Query: 777 TSRGDTGRLY-SSYERDYNSR 718
GD G +Y SSY +Y SR
Sbjct: 738 YGGGDAGGMYSSSYGGEYISR 758
Score = 95.1 bits (235), Expect(2) = e-114
Identities = 45/62 (72%), Positives = 53/62 (85%)
Frame = -2
Query: 2330 GGLDRDAVEEDLWKVFSEVGDITEVRLMKNPLTKKNKGFGFVRFATTEQAKRAVNELKHP 2151
GGLD+DA E DL KVFS VG++TEVRLM NP TKKNKGF F+RF+T EQAKRAV ELK+P
Sbjct: 215 GGLDKDATEGDLRKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFSTVEQAKRAVTELKNP 274
Query: 2150 MV 2145
++
Sbjct: 275 VI 276
>ref|XP_006338911.1| PREDICTED: nucleolin-like isoform X1 [Solanum tuberosum]
gi|565343588|ref|XP_006338912.1| PREDICTED:
nucleolin-like isoform X2 [Solanum tuberosum]
gi|565343590|ref|XP_006338913.1| PREDICTED:
nucleolin-like isoform X3 [Solanum tuberosum]
gi|565343592|ref|XP_006338914.1| PREDICTED:
nucleolin-like isoform X4 [Solanum tuberosum]
Length = 774
Score = 348 bits (892), Expect(2) = e-114
Identities = 232/561 (41%), Positives = 287/561 (51%), Gaps = 55/561 (9%)
Frame = -1
Query: 2124 VNGKQCGVCPSQDSDTLFIGNICKTWTKEAFKEKLAKYGVNNFEDLTLVEDVKNIGMNRG 1945
+NGKQCGV PSQD+DTLF+GNICKTWTKEA KEKL YGV+N EDLTLVED N GMNRG
Sbjct: 262 INGKQCGVSPSQDNDTLFLGNICKTWTKEALKEKLKHYGVDNIEDLTLVEDTNNEGMNRG 321
Query: 1944 FAFLEFSSRADALDACKHLQKMDVVFGTDRLAKVAFADTFIEPDDEIMAQVKKVFIDGLH 1765
FAFLEFSSR++A+DA K LQK DV+FG DR AKV+F D+FI+P DEIM+QVK VF+DGL
Sbjct: 322 FAFLEFSSRSEAMDAFKRLQKRDVMFGVDRPAKVSFEDSFIDPGDEIMSQVKTVFVDGLS 381
Query: 1764 AAWDEDRVRKHLRKFGRIEMVELARNMPAAKRTDFGFVTFDTHDAAVACVEGVNSAELCD 1585
A+WDEDRVR+ L+++G+IE VELARNMP+AKR DFGFVTFDTH+AAV C + +N+ EL +
Sbjct: 382 ASWDEDRVREFLKEYGKIEKVELARNMPSAKRKDFGFVTFDTHEAAVTCAKSINNEELGE 441
Query: 1584 GDDKVKVRARLTRPRQRGKLGNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGGQ 1405
GD+KVKVRARL+RP +RG+ +GG+
Sbjct: 442 GDNKVKVRARLSRPLERGR-----------------------------------GKYGGR 466
Query: 1404 G--RQYVGDFKQSRGPWGRYTSINLAFDGA------------------------------ 1321
G R + R PWGR + A G
Sbjct: 467 GDLRPWRMSMHGPRAPWGRIVPHSHAIRGTRVSTRMPPVVGRGFKRPAGSRDRRAVMDLP 526
Query: 1320 -ESRRTWTSPQRPLGQSSPGTAYRKGTSTREHIRPDEHFPRPSEFVARAP----AERHLS 1156
R T R + P +Y K + RE+ R +E P S VA P ++R S
Sbjct: 527 PRGRPTAPPSSRSYDRRPPVPSYPKSSLKREYGRREEIPPPKSRAVAEYPSRVHSDRRAS 586
Query: 1155 YRDIYPSRESGYMGNP--SQSGSRGA---------AHRPPPRHSKESYGRHMEQXXXXXX 1009
YRD Y SR SGY P + S +R A RPPP + +E GR +
Sbjct: 587 YRDEYSSRGSGYPELPRGTHSAARRAYVDDGYGQRFERPPPSY-REGRGREYDS------ 639
Query: 1008 XXXXXXXXXSKRPYLSVEEFHSDYIESMHRQPRARHDYR-GANMDMVYGDTAYGSESARX 832
SKRPY +V++ H Y E+ R RAR DY G+ YGD S R
Sbjct: 640 ------ASGSKRPYTAVDDVHPRYAEAGVRHSRARLDYELGSGSGSHYGDAYADSRLGRS 693
Query: 831 XXXXXXXXXXXXXXFSDG--TSRGDTGRLYSSYERD----YNSRDYASSETYGGADPYSY 670
S G +SR D G SY S Y S G+D S
Sbjct: 694 NLGYGGSRGSLSGQDSHGMYSSRQDMGYGGGSYGGSDVGGMYSSSYGSDYMSRGSDVDSV 753
Query: 669 PNSSRRMNNGYANGRRPRTYY 607
+S +GY +YY
Sbjct: 754 YSSRGMGGSGYTGSGGSGSYY 774
Score = 94.0 bits (232), Expect(2) = e-114
Identities = 44/62 (70%), Positives = 53/62 (85%)
Frame = -2
Query: 2330 GGLDRDAVEEDLWKVFSEVGDITEVRLMKNPLTKKNKGFGFVRFATTEQAKRAVNELKHP 2151
GGLD+DA E+DL KVFS+VG++TEVRLM N TKKNKGF F+RFAT EQAKRA ELK+P
Sbjct: 201 GGLDKDATEDDLRKVFSKVGEVTEVRLMMNSYTKKNKGFAFLRFATVEQAKRACTELKNP 260
Query: 2150 MV 2145
++
Sbjct: 261 VI 262
>ref|XP_006338915.1| PREDICTED: nucleolin-like isoform X5 [Solanum tuberosum]
Length = 773
Score = 348 bits (892), Expect(2) = e-114
Identities = 233/561 (41%), Positives = 288/561 (51%), Gaps = 55/561 (9%)
Frame = -1
Query: 2124 VNGKQCGVCPSQDSDTLFIGNICKTWTKEAFKEKLAKYGVNNFEDLTLVEDVKNIGMNRG 1945
+NGKQCGV PSQD+DTLF+GNICKTWTKEA KEKL YGV+N EDLTLVED N GMNRG
Sbjct: 262 INGKQCGVSPSQDNDTLFLGNICKTWTKEALKEKLKHYGVDNIEDLTLVEDTNNEGMNRG 321
Query: 1944 FAFLEFSSRADALDACKHLQKMDVVFGTDRLAKVAFADTFIEPDDEIMAQVKKVFIDGLH 1765
FAFLEFSSR++A+DA K LQK DV+FG DR AKV+F D+FI+P DEIM+QVK VF+DGL
Sbjct: 322 FAFLEFSSRSEAMDAFKRLQKRDVMFGVDRPAKVSFEDSFIDPGDEIMSQVKTVFVDGLS 381
Query: 1764 AAWDEDRVRKHLRKFGRIEMVELARNMPAAKRTDFGFVTFDTHDAAVACVEGVNSAELCD 1585
A+WDEDRVR+ L+++G+IE VELARNMP+AKR DFGFVTFDTH+AAV C + +N+ EL +
Sbjct: 382 ASWDEDRVREFLKEYGKIEKVELARNMPSAKRKDFGFVTFDTHEAAVTCAKSINNEELGE 441
Query: 1584 GDDKVKVRARLTRPRQRGKLGNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGGQ 1405
GD+KVKVRARL+RP +RG+ +GG+
Sbjct: 442 GDNKVKVRARLSRPLERGR-----------------------------------GKYGGR 466
Query: 1404 G--RQYVGDFKQSRGPWGRYTSINLAFDGA------------------------------ 1321
G R + R PWGR + A G
Sbjct: 467 GDLRPWRMSMHGPRAPWGRIVPHSHAIRGTRVSTRMPPVVGRGFKRPAGSRDRRAVMDLP 526
Query: 1320 -ESRRTWTSPQRPLGQSSPGTAYRKGTSTREHIRPDEHFPRPSEFVARAP----AERHLS 1156
R T R + P +Y K + RE+ R +E P S VA P ++R S
Sbjct: 527 PRGRPTAPPSSRSYDRRPPVPSYPKSSLKREYGRREEIPPPKSRAVAEYPSRVHSDRRAS 586
Query: 1155 YRDIYPSRESGYMGNP--SQSGSRGA---------AHRPPPRHSKESYGRHMEQXXXXXX 1009
YRD Y SR SGY P + S +R A RPPP + +E GR +
Sbjct: 587 YRDEYSSRGSGYPELPRGTHSAARRAYVDDGYGQRFERPPPSY-REGRGREYDS------ 639
Query: 1008 XXXXXXXXXSKRPYLSVEEFHSDYIESMHRQPRARHDYR-GANMDMVYGDTAYGSESARX 832
SKRPY +V++ H Y E+ R RAR DY G+ YGD AY R
Sbjct: 640 ------ASGSKRPYTAVDDVHPRYAEAGVRHSRARLDYELGSGSGSHYGD-AYADRLGRS 692
Query: 831 XXXXXXXXXXXXXXFSDG--TSRGDTGRLYSSYERD----YNSRDYASSETYGGADPYSY 670
S G +SR D G SY S Y S G+D S
Sbjct: 693 NLGYGGSRGSLSGQDSHGMYSSRQDMGYGGGSYGGSDVGGMYSSSYGSDYMSRGSDVDSV 752
Query: 669 PNSSRRMNNGYANGRRPRTYY 607
+S +GY +YY
Sbjct: 753 YSSRGMGGSGYTGSGGSGSYY 773
Score = 94.0 bits (232), Expect(2) = e-114
Identities = 44/62 (70%), Positives = 53/62 (85%)
Frame = -2
Query: 2330 GGLDRDAVEEDLWKVFSEVGDITEVRLMKNPLTKKNKGFGFVRFATTEQAKRAVNELKHP 2151
GGLD+DA E+DL KVFS+VG++TEVRLM N TKKNKGF F+RFAT EQAKRA ELK+P
Sbjct: 201 GGLDKDATEDDLRKVFSKVGEVTEVRLMMNSYTKKNKGFAFLRFATVEQAKRACTELKNP 260
Query: 2150 MV 2145
++
Sbjct: 261 VI 262
>ref|XP_007220623.1| hypothetical protein PRUPE_ppa002214mg [Prunus persica]
gi|462417085|gb|EMJ21822.1| hypothetical protein
PRUPE_ppa002214mg [Prunus persica]
Length = 700
Score = 347 bits (889), Expect(2) = e-114
Identities = 241/562 (42%), Positives = 294/562 (52%), Gaps = 74/562 (13%)
Frame = -1
Query: 2124 VNGKQCGVCPSQDSDTLFIGNICKTWTKEAFKEKLAKYGVNNFEDLTLVEDVKNIGMNRG 1945
+NGKQCGV PSQDSDTLF+GNI KTWTK+A +EKL YGV+N EDLTLVED N+GMNRG
Sbjct: 183 INGKQCGVTPSQDSDTLFLGNISKTWTKDALREKLKHYGVDNVEDLTLVEDTNNVGMNRG 242
Query: 1944 FAFLEFSSRADALDACKHLQKMDVVFGTDRLAKVAFADTFIEPDDEIMAQVKKVFIDGLH 1765
FAFLEFSSR+DA+DA K LQK D+VFG DR AKV+FAD+FI+P DEIMAQVK VF+DGL
Sbjct: 243 FAFLEFSSRSDAMDAFKRLQKRDIVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGLP 302
Query: 1764 AAWDEDRVRKHLRKFGRIEMVELARNMPAAKRTDFGFVTFDTHDAAVACVEGVNSAELCD 1585
A+WDED V+ L+K+G +E +ELARNMP+AKR DFGFVTFDTHDAAV C + +N+AEL +
Sbjct: 303 ASWDEDHVQDLLKKYGEVEKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNAELGE 362
Query: 1584 GDDKVKVRARLTRPRQRGKLGNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGGQ 1405
GD+K KVRARL+RP QRGK G H
Sbjct: 363 GDNKAKVRARLSRPLQRGK-GKHV------------------------------------ 385
Query: 1404 GRQYVGDFKQS-------RGPWGRYTSINL----AFDGAESRRTWTSPQRPLG------- 1279
GR GD++ S RG WGR T +L G SR S +RP+G
Sbjct: 386 GR---GDYRPSRAVGRVVRGSWGRPTPRSLPPLRGLRGVGSRIPPASVKRPVGLRERRPA 442
Query: 1278 -------------------QSSPGTAYRKGTSTREHIRPDEHFPRPS----EFVARAPAE 1168
+ P AY K + RE+ R DE P S ++ +RA E
Sbjct: 443 MSPYPARGRPLPPPARSYDRRPPVPAYPKSSFKREYGRRDEVPPPRSRVATDYGSRAVPE 502
Query: 1167 RHLSYRDIYPSRESGYMGNP---SQSGSRGA----------AHRPPPRHSKESY--GRHM 1033
R SYRD Y R GY P S++G R A PPP H SY GR
Sbjct: 503 RRQSYRDDYTPRGPGYSDPPRSTSRTGGRRAYVDEGYGQRYERHPPPSHPPPSYREGRAR 562
Query: 1032 EQXXXXXXXXXXXXXXXSKRPYLSVEEFHSDYIESMHRQPRARHDYRGANMDMVYGD--- 862
+ SKRPY ++++ Y ++ RQ RAR DY A+ YGD
Sbjct: 563 D----------YDSISGSKRPYSALDDVPPRYADAGIRQSRARLDYEYASGSQ-YGDAYS 611
Query: 861 -----TAYGSESARXXXXXXXXXXXXXXXFSDGTSRG--DTGRLY-SSYERDYNSR---- 718
++ G S+R G S G D G +Y SSY DY SR
Sbjct: 612 DRMGRSSLGYGSSRTSQDSHGLYSSRQGMGYGGGSYGGNDVGGMYSSSYGGDYMSRGSDV 671
Query: 717 ---DYASSETYGGADPYSYPNS 661
Y+S + G SY S
Sbjct: 672 GGSSYSSMYSGRGVGGSSYMGS 693
Score = 95.1 bits (235), Expect(2) = e-114
Identities = 45/62 (72%), Positives = 52/62 (83%)
Frame = -2
Query: 2330 GGLDRDAVEEDLWKVFSEVGDITEVRLMKNPLTKKNKGFGFVRFATTEQAKRAVNELKHP 2151
GGLD+DA E DL K F+ VG++TEVRLM NP TKKNKGF F+RFAT EQAKRAV ELKHP
Sbjct: 122 GGLDKDASETDLKKAFAIVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKRAVTELKHP 181
Query: 2150 MV 2145
++
Sbjct: 182 VI 183
>ref|NP_001275825.1| RNA recognition motif protein 1 [Citrus sinensis]
gi|567905936|ref|XP_006445456.1| hypothetical protein
CICLE_v10018944mg [Citrus clementina]
gi|568819733|ref|XP_006464400.1| PREDICTED: nucleolin
isoform X4 [Citrus sinensis] gi|359386142|gb|AEV43360.1|
RNA recognition motif protein 1 [Citrus sinensis]
gi|557547718|gb|ESR58696.1| hypothetical protein
CICLE_v10018944mg [Citrus clementina]
Length = 775
Score = 346 bits (888), Expect(2) = e-113
Identities = 228/507 (44%), Positives = 274/507 (54%), Gaps = 21/507 (4%)
Frame = -1
Query: 2124 VNGKQCGVCPSQDSDTLFIGNICKTWTKEAFKEKLAKYGVNNFEDLTLVEDVKNIGMNRG 1945
+NGKQCGV PSQDSDTLF+GNICKTWTKEA KEKL YGV+N EDLTLVED N GMNRG
Sbjct: 263 INGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNVEDLTLVEDSNNEGMNRG 322
Query: 1944 FAFLEFSSRADALDACKHLQKMDVVFGTDRLAKVAFADTFIEPDDEIMAQVKKVFIDGLH 1765
FAFLEFSSR+DA+DA K LQK DV+FG DR AKV+FAD+FI+P DEIMAQVK VF+DGL
Sbjct: 323 FAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGLP 382
Query: 1764 AAWDEDRVRKHLRKFGRIEMVELARNMPAAKRTDFGFVTFDTHDAAVACVEGVNSAELCD 1585
A+WDEDRVR+ L+ +G I +ELARNMP+AKR DFGFVTFDTHDAAV C + +N+AEL +
Sbjct: 383 ASWDEDRVRELLKNYGEITKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNAELGE 442
Query: 1584 GDDKVKVRARLTRPRQRGKLGNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGGQ 1405
GD+K KVRARL+RP QRGK G H G
Sbjct: 443 GDNKAKVRARLSRPLQRGK-GKHASRGDFRSGRGTGRATRGSWGLPSPRSLPGRSARGIG 501
Query: 1404 GRQYVGDFKQSRGPWGRYTSINLAFDGAESRRTWTSPQRPLGQSSPGTAYRKGTSTREHI 1225
R K+ R +++ A +R P R + +P +Y K RE+
Sbjct: 502 SRLPPASVKRPVPVRDRRPIMSMT---ARARPMPPPPPRSYDRRAPVPSYPKPGLKREYG 558
Query: 1224 RPDEHFP----RPSEFVARAPAERHLSYRDIYPSRESGYMGNPSQSGSRGAAHRPPPRHS 1057
R DE P P ++ +R +R YRD Y SR SGY P +S SRGAA RP +
Sbjct: 559 RRDEVPPPRSRAPVDYGSRVVPDRR-PYRDEYTSRGSGYPDMP-RSTSRGAARRP---YV 613
Query: 1056 KESYGRHMEQ---XXXXXXXXXXXXXXXSKRPYLSVEEFHSDYIESMHRQPRARHDYRGA 886
+ Y + E+ SKRPY V++ Y + R RAR DY
Sbjct: 614 DDGYAQRFERPPPSYREGRARDYETVSGSKRPYSVVDDVPPRYADPGVRHSRARLDYDLG 673
Query: 885 NMDMVYGDTAYGSESARXXXXXXXXXXXXXXXFSDGT-------------SRGDTGRLY- 748
YGD AYG R S G S GD G +Y
Sbjct: 674 GGAPQYGD-AYGDRMGRSNLGYGGSRSSISSQDSHGLYSSRQGMGYGGSYSGGDVGGMYS 732
Query: 747 SSYERDYNSRDYASSETYGGADPYSYP 667
SSY DY R S+ G + YP
Sbjct: 733 SSYGSDYMPR---GSDVGGSSYSSMYP 756
Score = 93.6 bits (231), Expect(2) = e-113
Identities = 43/62 (69%), Positives = 54/62 (87%)
Frame = -2
Query: 2330 GGLDRDAVEEDLWKVFSEVGDITEVRLMKNPLTKKNKGFGFVRFATTEQAKRAVNELKHP 2151
GGLD+D V +DL KVFS+VG++TEVRLM NP TKKNKGF F+RFAT EQA++AV ELK+P
Sbjct: 202 GGLDKDVVGDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQARQAVTELKNP 261
Query: 2150 MV 2145
++
Sbjct: 262 VI 263
>ref|XP_006445454.1| hypothetical protein CICLE_v10018944mg [Citrus clementina]
gi|567905934|ref|XP_006445455.1| hypothetical protein
CICLE_v10018944mg [Citrus clementina]
gi|568819727|ref|XP_006464397.1| PREDICTED: nucleolin
isoform X1 [Citrus sinensis]
gi|568819729|ref|XP_006464398.1| PREDICTED: nucleolin
isoform X2 [Citrus sinensis]
gi|568819731|ref|XP_006464399.1| PREDICTED: nucleolin
isoform X3 [Citrus sinensis] gi|557547716|gb|ESR58694.1|
hypothetical protein CICLE_v10018944mg [Citrus
clementina] gi|557547717|gb|ESR58695.1| hypothetical
protein CICLE_v10018944mg [Citrus clementina]
Length = 776
Score = 346 bits (887), Expect(2) = e-113
Identities = 228/508 (44%), Positives = 274/508 (53%), Gaps = 22/508 (4%)
Frame = -1
Query: 2124 VNGKQCGVCPSQDSDTLFIGNICKTWTKEAFKEKLAKYGVNNFEDLTLVEDVKNIGMNRG 1945
+NGKQCGV PSQDSDTLF+GNICKTWTKEA KEKL YGV+N EDLTLVED N GMNRG
Sbjct: 263 INGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNVEDLTLVEDSNNEGMNRG 322
Query: 1944 FAFLEFSSRADALDACKHLQKMDVVFGTDRLAKVAFADTFIEPDDEIMAQVKKVFIDGLH 1765
FAFLEFSSR+DA+DA K LQK DV+FG DR AKV+FAD+FI+P DEIMAQVK VF+DGL
Sbjct: 323 FAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGLP 382
Query: 1764 AAWDEDRVRKHLRKFGRIEMVELARNMPAAKRTDFGFVTFDTHDAAVACVEGVNSAELCD 1585
A+WDEDRVR+ L+ +G I +ELARNMP+AKR DFGFVTFDTHDAAV C + +N+AEL +
Sbjct: 383 ASWDEDRVRELLKNYGEITKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNAELGE 442
Query: 1584 GDDKVKVRARLTRPRQRGKLGNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGGQ 1405
GD+K KVRARL+RP QRGK G H G
Sbjct: 443 GDNKAKVRARLSRPLQRGK-GKHASRGDFRSGRGTGRATRGSWGLPSPRSLPGRSARGIG 501
Query: 1404 GRQYVGDFKQSRGPWGRYTSINLAFDGAESRRTWTSPQRPLGQSSPGTAYRKGTSTREHI 1225
R K+ R +++ A +R P R + +P +Y K RE+
Sbjct: 502 SRLPPASVKRPVPVRDRRPIMSMT---ARARPMPPPPPRSYDRRAPVPSYPKPGLKREYG 558
Query: 1224 RPDEHFP----RPSEFVARAPAERHLSYRDIYPSRESGYMGNPSQSGSRGAAHRPPPRHS 1057
R DE P P ++ +R +R YRD Y SR SGY P +S SRGAA RP +
Sbjct: 559 RRDEVPPPRSRAPVDYGSRVVPDRR-PYRDEYTSRGSGYPDMP-RSTSRGAARRP---YV 613
Query: 1056 KESYGRHMEQ---XXXXXXXXXXXXXXXSKRPYLSVEEFHSDYIESMHRQPRARHDYRGA 886
+ Y + E+ SKRPY V++ Y + R RAR DY
Sbjct: 614 DDGYAQRFERPPPSYREGRARDYETVSGSKRPYSVVDDVPPRYADPGVRHSRARLDYDLG 673
Query: 885 NMDMVYGDTAYGSESARXXXXXXXXXXXXXXXFSDGT--------------SRGDTGRLY 748
YGD AYG R S G S GD G +Y
Sbjct: 674 GGAPQYGD-AYGDRMGRSNLGYGGSRSSISSQDSHGLYSSRQGMGYGGGSYSGGDVGGMY 732
Query: 747 -SSYERDYNSRDYASSETYGGADPYSYP 667
SSY DY R S+ G + YP
Sbjct: 733 SSSYGSDYMPR---GSDVGGSSYSSMYP 757
Score = 93.6 bits (231), Expect(2) = e-113
Identities = 43/62 (69%), Positives = 54/62 (87%)
Frame = -2
Query: 2330 GGLDRDAVEEDLWKVFSEVGDITEVRLMKNPLTKKNKGFGFVRFATTEQAKRAVNELKHP 2151
GGLD+D V +DL KVFS+VG++TEVRLM NP TKKNKGF F+RFAT EQA++AV ELK+P
Sbjct: 202 GGLDKDVVGDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQARQAVTELKNP 261
Query: 2150 MV 2145
++
Sbjct: 262 VI 263
>ref|XP_007052382.1| RNA-binding family protein isoform 2 [Theobroma cacao]
gi|508704643|gb|EOX96539.1| RNA-binding family protein
isoform 2 [Theobroma cacao]
Length = 802
Score = 345 bits (886), Expect(2) = e-113
Identities = 225/515 (43%), Positives = 276/515 (53%), Gaps = 16/515 (3%)
Frame = -1
Query: 2124 VNGKQCGVCPSQDSDTLFIGNICKTWTKEAFKEKLAKYGVNNFEDLTLVEDVKNIGMNRG 1945
+NGKQCGV PSQDSDTLF+GNICKTWTKEA KEKL YGV+N EDLTLVED N GMNRG
Sbjct: 292 INGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNVEDLTLVEDSNNEGMNRG 351
Query: 1944 FAFLEFSSRADALDACKHLQKMDVVFGTDRLAKVAFADTFIEPDDEIMAQVKKVFIDGLH 1765
FAFLEF+SR+DA+DA K LQ+ DV+FG DR AKV+FAD+FI+P DEIMAQV+ +FID L
Sbjct: 352 FAFLEFASRSDAMDAFKCLQRRDVLFGVDRPAKVSFADSFIDPGDEIMAQVRTIFIDCLP 411
Query: 1764 AAWDEDRVRKHLRKFGRIEMVELARNMPAAKRTDFGFVTFDTHDAAVACVEGVNSAELCD 1585
+WDEDRVR+ L+K+G IE +ELARNMP+A R D+GFVTFDTHDAAV C + +N+ EL +
Sbjct: 412 PSWDEDRVRELLKKYGEIEKIELARNMPSADRKDYGFVTFDTHDAAVTCAKSINNTELGE 471
Query: 1584 GDDKVKVRARLTRPRQRGKLGNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGGQ 1405
GD K KVRARL+RP QRG+ G H G
Sbjct: 472 GDSKAKVRARLSRPHQRGR-GKHIGRDGFRSGRGSGRVVRGSWGRPPPRGFPPRGVRGIS 530
Query: 1404 GRQYVGDFKQSRGPWGRYTSINLAFDGAESRRTWTSPQRPLGQSSPGTAYRKGTSTREHI 1225
R K+ P G + A R P R + +P Y K + RE+
Sbjct: 531 NRVPPPSLKR---PVGLRDRRPIMSTPARGRPLAPPPSRSYDRRAPVPPYPKSSLKREYG 587
Query: 1224 RPDEHFP----RPSEFVARAPAERHLSYRDIYPSRESGYMGNPSQSGSRGAAHRPPPRHS 1057
R DE P P ++ +R ER SYRD Y +R SGY P +S SR AA RP +
Sbjct: 588 RRDELPPPRSRAPVDYGSRVVPERRPSYRDDYSARSSGYSDLP-RSTSRTAARRP---YV 643
Query: 1056 KESYGRHMEQ---XXXXXXXXXXXXXXXSKRPYLSVEEFHSDYIESMHRQPRARHDYRGA 886
++YG+ E+ SKRPY ++++ Y ++ R RAR DY A
Sbjct: 644 DDAYGQRFERPPPSYRDGRGRDYDSMSGSKRPYSAMDDVPPRYADAGARHSRARLDYELA 703
Query: 885 NMDMVYGDTAYGSESARXXXXXXXXXXXXXXXFSDGT--------SRGDTGRLYSSYERD 730
Y DT YG R S G S D G +YSS
Sbjct: 704 TGAPPYADT-YGDRLGRSSLGYGGSRSSMSSQDSHGLYGSRQGSFSGSDVGGMYSS---S 759
Query: 729 YNSRDYASSETYGGADPYSYPNSSRRM-NNGYANG 628
S DY + G YS SSR M + Y G
Sbjct: 760 GYSGDYMPRGSDVGGSSYSSMYSSRGMGGSSYMGG 794
Score = 93.2 bits (230), Expect(2) = e-113
Identities = 42/62 (67%), Positives = 53/62 (85%)
Frame = -2
Query: 2330 GGLDRDAVEEDLWKVFSEVGDITEVRLMKNPLTKKNKGFGFVRFATTEQAKRAVNELKHP 2151
GGLD+DA E+D+ KVFS+VG++ +VRLM NP TKKNKGF F+RFA EQAKRAV ELK+P
Sbjct: 231 GGLDKDATEDDIRKVFSQVGEVVDVRLMMNPQTKKNKGFAFLRFANVEQAKRAVTELKNP 290
Query: 2150 MV 2145
++
Sbjct: 291 VI 292
>ref|XP_007052381.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590724146|ref|XP_007052383.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508704642|gb|EOX96538.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508704644|gb|EOX96540.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 808
Score = 343 bits (880), Expect(2) = e-112
Identities = 225/521 (43%), Positives = 276/521 (52%), Gaps = 22/521 (4%)
Frame = -1
Query: 2124 VNGKQCGVCPSQDSDTLFIGNICKTWTKEAFKEKLAKYGVNNFEDLTLVEDVKNIGMNRG 1945
+NGKQCGV PSQDSDTLF+GNICKTWTKEA KEKL YGV+N EDLTLVED N GMNRG
Sbjct: 292 INGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNVEDLTLVEDSNNEGMNRG 351
Query: 1944 FAFLEFSSRADALDACKHLQKMDVVFGTDRLAKVAFADTFIEPDDEIMAQVKKVFIDGLH 1765
FAFLEF+SR+DA+DA K LQ+ DV+FG DR AKV+FAD+FI+P DEIMAQV+ +FID L
Sbjct: 352 FAFLEFASRSDAMDAFKCLQRRDVLFGVDRPAKVSFADSFIDPGDEIMAQVRTIFIDCLP 411
Query: 1764 AAWDEDRVRKHLRKFGRIEMVELARNMPAAKRTDFGFVTFDTHDAAVACVEGVNSAELCD 1585
+WDEDRVR+ L+K+G IE +ELARNMP+A R D+GFVTFDTHDAAV C + +N+ EL +
Sbjct: 412 PSWDEDRVRELLKKYGEIEKIELARNMPSADRKDYGFVTFDTHDAAVTCAKSINNTELGE 471
Query: 1584 GDDKVKVRARLTRPRQRGKLGNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGGQ 1405
GD K KVRARL+RP QRG+ G H G
Sbjct: 472 GDSKAKVRARLSRPHQRGR-GKHIGRDGFRSGRGSGRVVRGSWGRPPPRGFPPRGVRGIS 530
Query: 1404 GRQYVGDFKQSRGPWGRYTSINLAFDGAESRRTWTSPQRPLGQSSPGTAYRKGTSTREHI 1225
R K+ P G + A R P R + +P Y K + RE+
Sbjct: 531 NRVPPPSLKR---PVGLRDRRPIMSTPARGRPLAPPPSRSYDRRAPVPPYPKSSLKREYG 587
Query: 1224 RPDEHFP----RPSEFVARAPAERHLSYRDIYPSRESGYMGNPSQSGSRGAAHRPPPRHS 1057
R DE P P ++ +R ER SYRD Y +R SGY P +S SR AA RP +
Sbjct: 588 RRDELPPPRSRAPVDYGSRVVPERRPSYRDDYSARSSGYSDLP-RSTSRTAARRP---YV 643
Query: 1056 KESYGRHMEQ---XXXXXXXXXXXXXXXSKRPYLSVEEFHSDYIESMHRQPRARHDYRGA 886
++YG+ E+ SKRPY ++++ Y ++ R RAR DY A
Sbjct: 644 DDAYGQRFERPPPSYRDGRGRDYDSMSGSKRPYSAMDDVPPRYADAGARHSRARLDYELA 703
Query: 885 NMDMVYGDTAYGSESARXXXXXXXXXXXXXXXFSDGT--------------SRGDTGRLY 748
Y DT YG R S G S D G +Y
Sbjct: 704 TGAPPYADT-YGDRLGRSSLGYGGSRSSMSSQDSHGLYGSRQGMGYGGGSFSGSDVGGMY 762
Query: 747 SSYERDYNSRDYASSETYGGADPYSYPNSSRRM-NNGYANG 628
SS S DY + G YS SSR M + Y G
Sbjct: 763 SS---SGYSGDYMPRGSDVGGSSYSSMYSSRGMGGSSYMGG 800
Score = 93.2 bits (230), Expect(2) = e-112
Identities = 42/62 (67%), Positives = 53/62 (85%)
Frame = -2
Query: 2330 GGLDRDAVEEDLWKVFSEVGDITEVRLMKNPLTKKNKGFGFVRFATTEQAKRAVNELKHP 2151
GGLD+DA E+D+ KVFS+VG++ +VRLM NP TKKNKGF F+RFA EQAKRAV ELK+P
Sbjct: 231 GGLDKDATEDDIRKVFSQVGEVVDVRLMMNPQTKKNKGFAFLRFANVEQAKRAVTELKNP 290
Query: 2150 MV 2145
++
Sbjct: 291 VI 292
>ref|XP_006375182.1| hypothetical protein POPTR_0014s05040g [Populus trichocarpa]
gi|550323501|gb|ERP52979.1| hypothetical protein
POPTR_0014s05040g [Populus trichocarpa]
Length = 785
Score = 339 bits (870), Expect(2) = e-112
Identities = 234/554 (42%), Positives = 292/554 (52%), Gaps = 48/554 (8%)
Frame = -1
Query: 2124 VNGKQCGVCPSQDSDTLFIGNICKTWTKEAFKEKLAKYGVNNFEDLTLVEDVKNIGMNRG 1945
+NGKQCGV PSQDSDTLF+GNICKTWTKEA KEKL YGV N EDLTLVED N+GMNRG
Sbjct: 276 INGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDLTLVEDSNNLGMNRG 335
Query: 1944 FAFLEFSSRADALDACKHLQKMDVVFGTDRLAKVAFADTFIEPDDEIMAQVKKVFIDGLH 1765
FAFLEFSSR+DA++A K LQK DV+FG DR AKV+FAD+FI P DEIMAQVK +FIDGL
Sbjct: 336 FAFLEFSSRSDAMNAFKRLQKRDVLFGVDRPAKVSFADSFIGPGDEIMAQVKTLFIDGLP 395
Query: 1764 AAWDEDRVRKHLRKFGRIEMVELARNMPAAKRTDFGFVTFDTHDAAVACVEGVNSAELCD 1585
A+WDEDR R L+K+G IE +ELARNMP+A+R DFGFVTFDTHDAAVAC + +N+ EL +
Sbjct: 396 ASWDEDRFRVLLKKYGNIEKIELARNMPSARRKDFGFVTFDTHDAAVACAKSINNVELGE 455
Query: 1584 GDDKVKVRARLTRPRQRGKLGNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGGQ 1405
GD+KVKVRARL+RP QRGK G H G
Sbjct: 456 GDNKVKVRARLSRPLQRGK-GKHASR--------------------------------GD 482
Query: 1404 GRQYVGDFKQSRGPWGR-----YTSINLAFDGAESR-------------------RTWTS 1297
+ G + RGPW R Y++ G +R + +
Sbjct: 483 FQSGHGASRVVRGPWVRPLQHSYSTRAPPVRGIATRAPPVSLKRSPGLRERRPPVMSMPA 542
Query: 1296 PQRPLGQSS-------PGTAYRKGTSTREHIRPDEHFPRPS-----EFVARAPAERHLSY 1153
RPL S P +Y KG+ RE++R +E P P ++ R+ ER SY
Sbjct: 543 RSRPLAPHSRSYDRRPPPPSYPKGSFKREYVRHEE-LPSPRSRPAVDYGPRSVPERRPSY 601
Query: 1152 RDIYPSRESGYMGNPSQSGSRGAAHRPPPRHSKESYGRHMEQ---XXXXXXXXXXXXXXX 982
R+ Y SR + Y P +S SR +A R ++ + Y + E+
Sbjct: 602 REDYSSRGTSYSDLP-RSTSRTSARR---AYADDGYNQRYERPPPSYHEGRSRDYDSVAG 657
Query: 981 SKRPYLSVEEFHSDYIESMHRQPRARHDYRGANMDMVYGDTAYGSESARXXXXXXXXXXX 802
SKRPY ++++ Y ++ R R R DY + YGD AY R
Sbjct: 658 SKRPYSAIDDIPPRYADAGARHSRPRLDYELGSRASQYGD-AYSDRLGRSAVGYGGSRNS 716
Query: 801 XXXXFSDG--TSR------GDTGRLYSSYERDYNSRDYASSETYGGADPYSYPNSSRRM- 649
S G +SR D G SSY DY SR GG+ YS SSR M
Sbjct: 717 ISSQDSHGMYSSRQGSYGGSDGGMYQSSYSGDYMSR----GGDVGGSS-YSSMYSSRGMG 771
Query: 648 NNGYANGRRPRTYY 607
++ Y +YY
Sbjct: 772 SSNYMGTGSSGSYY 785
Score = 96.7 bits (239), Expect(2) = e-112
Identities = 45/62 (72%), Positives = 53/62 (85%)
Frame = -2
Query: 2330 GGLDRDAVEEDLWKVFSEVGDITEVRLMKNPLTKKNKGFGFVRFATTEQAKRAVNELKHP 2151
GGLD+DA E+DL KVFS VG++TE RLM NP TKKNKGF F+RFAT EQAKRAV ELK+P
Sbjct: 215 GGLDKDATEDDLRKVFSRVGEVTEARLMMNPQTKKNKGFAFLRFATVEQAKRAVTELKNP 274
Query: 2150 MV 2145
++
Sbjct: 275 VI 276
>ref|XP_004229726.1| PREDICTED: uncharacterized protein LOC101251325 [Solanum
lycopersicum]
Length = 783
Score = 337 bits (864), Expect(2) = e-112
Identities = 234/578 (40%), Positives = 294/578 (50%), Gaps = 72/578 (12%)
Frame = -1
Query: 2124 VNGKQCGVCPSQDSDTLFIGNICKTWTKEAFKEKLAKYGVNNFEDLTLVEDVKNIGMNRG 1945
VNGK+CGV PSQDSDTLF+GNICK+WTKEA KEKL YG++N EDLTLVED N GMNRG
Sbjct: 270 VNGKKCGVSPSQDSDTLFLGNICKSWTKEALKEKLKHYGIDNVEDLTLVEDTNNEGMNRG 329
Query: 1944 FAFLEFSSRADALDACKHLQKMDVVFGTDRLAKVAFADTFIEPDDEIMAQVKKVFIDGLH 1765
FAFLEF SR++A+DA K LQK D+VFG DR AKV+FAD+FI+P DEIMAQVK +FIDGL
Sbjct: 330 FAFLEFPSRSEAMDAFKRLQKRDIVFGVDRPAKVSFADSFIDPGDEIMAQVKTIFIDGLS 389
Query: 1764 AAWDEDRVRKHLRKFGRIEMVELARNMPAAKRTDFGFVTFDTHDAAVACVEGVNSAELCD 1585
A+WDEDRVR L+++G+IE +ELARNMP+AKR DFGFV+FDTHDAAV CV+ +N+ EL +
Sbjct: 390 ASWDEDRVRDLLKQYGKIEKIELARNMPSAKRKDFGFVSFDTHDAAVICVKSINNEELGE 449
Query: 1584 GDDKVKVRARLTRPRQRGKLGNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGGQ 1405
GD KVKVRARL+RP QRG+
Sbjct: 450 GDKKVKVRARLSRPLQRGR----------------------------------------- 468
Query: 1404 GRQYVGDFKQSRG-------PWGRYTSINLAFDGA--------------------ESRRT 1306
GR D + RG PWGR S L G+ RR
Sbjct: 469 GRYGARDLRPRRGMMRGPPAPWGRPVSRRLPVRGSRVGSRVPPLGDRSFKRPVTMRDRRP 528
Query: 1305 WTSPQ-RPLGQSS--------PGTAYRKGTSTREHIRPDEHFPRPS----EFVARAPAER 1165
+P+ RP+ S P +Y K RE+ R +E P S ++ +R P++R
Sbjct: 529 VMAPRGRPMSPLSSRSYDRRPPVPSYSKSNLKREYARHEEIPPPRSRSTVDYPSRFPSDR 588
Query: 1164 HLSYRDIYPSRESGYMGNPSQSGSRGAA-----------------HRPPPRHSKESYGRH 1036
+SYRD Y SR S Y P RG A RPPP + +E GR
Sbjct: 589 RVSYRDDYSSRSSAYSDFP-----RGTARTTTRRTYVDDDYEQRYERPPPAY-REGRGRE 642
Query: 1035 MEQXXXXXXXXXXXXXXXSKRPYLSVEEFHSDYIESMHRQPRARHDYR-GANMDMVYGDT 859
+ SKR Y ++++ Y ++ R RAR DY G YGD
Sbjct: 643 YDS------------TSGSKRSYSAMDDVPPRYADAGPRPSRARLDYELGDASGAQYGDY 690
Query: 858 A-----------YGSESARXXXXXXXXXXXXXXXFSDGT--SRGDTGRLYSSYERDYNSR 718
+ GS S+ + G+ G +G S Y DY SR
Sbjct: 691 SDSRLGRSNAGYSGSRSSLSGQDSHGMYSSRQGGYGGGSYDGSGVSGMYSSGYGGDYMSR 750
Query: 717 DYASSETYGGADPYSYPNSSRRM-NNGYANGRRPRTYY 607
S++ G + YS SSR M +GY +YY
Sbjct: 751 ---SNDVAGSS--YSSAYSSRSMGGSGYMGSGDSGSYY 783
Score = 98.6 bits (244), Expect(2) = e-112
Identities = 46/62 (74%), Positives = 56/62 (90%)
Frame = -2
Query: 2330 GGLDRDAVEEDLWKVFSEVGDITEVRLMKNPLTKKNKGFGFVRFATTEQAKRAVNELKHP 2151
GGLD+DAVE+DL K+FS+VG++TEVRL+ NPLTKKNKGF F+RFAT EQAKRA ELK+P
Sbjct: 209 GGLDKDAVEDDLRKIFSQVGEVTEVRLLMNPLTKKNKGFAFLRFATVEQAKRACIELKNP 268
Query: 2150 MV 2145
+V
Sbjct: 269 VV 270
>ref|XP_006338909.1| PREDICTED: nucleolin-like isoform X3 [Solanum tuberosum]
gi|565343584|ref|XP_006338910.1| PREDICTED:
nucleolin-like isoform X4 [Solanum tuberosum]
Length = 785
Score = 341 bits (875), Expect(2) = e-112
Identities = 235/571 (41%), Positives = 292/571 (51%), Gaps = 65/571 (11%)
Frame = -1
Query: 2124 VNGKQCGVCPSQDSDTLFIGNICKTWTKEAFKEKLAKYGVNNFEDLTLVEDVKNIGMNRG 1945
+NGKQCGV PSQD+DTLF+GNICKTWTKEA KEKL YGV+N EDLTLVED N GMNRG
Sbjct: 273 INGKQCGVSPSQDNDTLFLGNICKTWTKEALKEKLKHYGVDNTEDLTLVEDTNNEGMNRG 332
Query: 1944 FAFLEFSSRADALDACKHLQKMDVVFGTDRLAKVAFADTFIEPDDEIMAQVKKVFIDGLH 1765
FAFLEFSSR++A+DA K LQK DVVFG DR AKV+F D+FI+P DEIM+QVK VFIDGL
Sbjct: 333 FAFLEFSSRSEAMDAFKRLQKRDVVFGVDRPAKVSFEDSFIDPGDEIMSQVKTVFIDGLA 392
Query: 1764 AAWDEDRVRKHLRKFGRIEMVELARNMPAAKRTDFGFVTFDTHDAAVACVEGVNSAELCD 1585
+W+ED VR+ L+++G+I VELARN P+AKR DFGFVTFDTH+AAV C + +N+ EL +
Sbjct: 393 VSWNEDHVRELLKEYGKIRKVELARNRPSAKRKDFGFVTFDTHEAAVTCAKSINNEELGE 452
Query: 1584 GDDKVKVRARLTRPRQ--RGKLGNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHG 1411
GD+KVKVRARL+RP RGK G
Sbjct: 453 GDNKVKVRARLSRPLHMGRGKYGGR----------------------------------- 477
Query: 1410 GQGRQYVGDFKQSRGPWGRYTSINLAFDGA------------------------------ 1321
G+ R + S PWGR + + G
Sbjct: 478 GEFRPWRMPMHGSHAPWGRTAPYSRSIRGTRVSTCMPPVVGRGFKRPAALRDRHAEMALS 537
Query: 1320 -ESRRTWTSPQRPLGQSSPGTAYRKGTSTREHIRPDEHFPRPS----EFVARAPAERHLS 1156
R + P+R + P ++Y K RE+ R +E P S E+ +R ++R +S
Sbjct: 538 PRGRFMASPPRRSYDRRPPVSSYPKSNFKREYGRREEISPSRSRAIAEYPSRVHSDRRIS 597
Query: 1155 YRDIYPSRESGYMGNP--SQSGSRGA---------AHRPPPRHSKESYGRHMEQXXXXXX 1009
YRD Y SR SGY P + S +R A RPPP + +E GR +
Sbjct: 598 YRDEYSSRGSGYPELPRGTHSAARRAYVDDGYGQRFERPPPSY-REGRGREYDS------ 650
Query: 1008 XXXXXXXXXSKRPYLSVEEFHSDYIESMHRQPRARHDYR-GANMDMVYGDTAYGSESARX 832
SKRPY +V++ H Y E+ R RAR DY G+ YGD AYG R
Sbjct: 651 ------VSGSKRPYTAVDDVHPHYAEAGMRHSRARLDYELGSGSGSHYGD-AYGDRLGRS 703
Query: 831 XXXXXXXXXXXXXXFSDG--TSR------------GDTGRLY-SSYERDYNSRDYASSET 697
S G +SR D G +Y SSY DY SR
Sbjct: 704 NLGYGGNRSSISRQDSHGIYSSRQGMGYGGGSYGGSDVGGMYSSSYGGDYMSR------- 756
Query: 696 YGGADPYSYPNSSRRM-NNGYANGRRPRTYY 607
G+D S SSR M +GY +YY
Sbjct: 757 --GSDVGSSVYSSRGMGGSGYMGSGGSGSYY 785
Score = 94.0 bits (232), Expect(2) = e-112
Identities = 45/62 (72%), Positives = 53/62 (85%)
Frame = -2
Query: 2330 GGLDRDAVEEDLWKVFSEVGDITEVRLMKNPLTKKNKGFGFVRFATTEQAKRAVNELKHP 2151
GGLD+DA EEDL KVFS+VG+ITEVRL+ N TKKNKGF F+RFAT EQAKRA ELK+P
Sbjct: 212 GGLDKDATEEDLRKVFSKVGEITEVRLLMNSQTKKNKGFAFLRFATVEQAKRACTELKNP 271
Query: 2150 MV 2145
++
Sbjct: 272 VI 273
>ref|XP_006354662.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like isoform X1
[Solanum tuberosum]
Length = 790
Score = 337 bits (864), Expect(2) = e-111
Identities = 233/579 (40%), Positives = 291/579 (50%), Gaps = 73/579 (12%)
Frame = -1
Query: 2124 VNGKQCGVCPSQDSDTLFIGNICKTWTKEAFKEKLAKYGVNNFEDLTLVEDVKNIGMNRG 1945
VNGK+CGV PSQDSDTLF+GNICK+WTKEA KEKL YG++N EDLTLVED N GMNRG
Sbjct: 276 VNGKKCGVSPSQDSDTLFLGNICKSWTKEALKEKLKHYGIDNVEDLTLVEDTNNEGMNRG 335
Query: 1944 FAFLEFSSRADALDACKHLQKMDVVFGTDRLAKVAFADTFIEPDDEIMAQVKKVFIDGLH 1765
FAFLEF SR++A+DA K LQK D+VFG DR AKV+FAD+FI+P DEIMAQVK +FIDGL
Sbjct: 336 FAFLEFPSRSEAMDAFKRLQKRDIVFGVDRPAKVSFADSFIDPGDEIMAQVKTIFIDGLS 395
Query: 1764 AAWDEDRVRKHLRKFGRIEMVELARNMPAAKRTDFGFVTFDTHDAAVACVEGVNSAELCD 1585
A+WDEDRVR L+++G+IE +ELARNMP+AKR DFGFV+FDTHDAAV CV+ +N+ EL +
Sbjct: 396 ASWDEDRVRDLLKQYGKIEKIELARNMPSAKRKDFGFVSFDTHDAAVICVKSINNEELGE 455
Query: 1584 GDDKVKVRARLTRPRQRGKLGNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGGQ 1405
GD KVKVRARL+RP QRG+
Sbjct: 456 GDKKVKVRARLSRPLQRGR----------------------------------------- 474
Query: 1404 GRQYVGDFKQSRG-------PWGRYTSINLAFDGA--------------------ESRRT 1306
GR D + RG PW R S L G+ RR
Sbjct: 475 GRYGARDLRPRRGLMRGPPAPWSRPVSRRLPVRGSRVSSRVPPLADRSFKRPVTMRDRRP 534
Query: 1305 WTSPQ-RPLGQSS--------PGTAYRKGTSTREHIRPDEHFPRPS----EFVARAPAER 1165
+P+ RP+ S P +Y K RE+ R +E P S ++ +R P++R
Sbjct: 535 VMAPRGRPMSPLSSRSYDRRPPVPSYSKSNLKREYARHEEIPPPRSRATVDYPSRFPSDR 594
Query: 1164 HLSYRDIYPSRESGYMGNPSQSGSRGAA-----------------HRPPPRHSKESYGRH 1036
+SYRD Y SR SGY P RG A RPPP + +E GR
Sbjct: 595 RVSYRDDYSSRSSGYSDFP-----RGTARTTTRRTYVDDDYEQRYERPPPAY-REGRGRE 648
Query: 1035 MEQXXXXXXXXXXXXXXXSKRPYLSVEEFHSDYIESMHRQPRARHDYR-GANMDMVYGDT 859
+ SKR Y ++++ Y ++ R R+R DY G YGD
Sbjct: 649 YDS------------TSGSKRSYSAMDDVPPRYADAGPRPSRSRLDYELGGASGTQYGDY 696
Query: 858 AYGSESARXXXXXXXXXXXXXXXFSDGT--------------SRGDTGRLYSSYERDYNS 721
+ S R S G G +G S Y DY S
Sbjct: 697 SDSSRLGRSNAGYSGSRNSLSGQDSHGVYSSRQGGYGGGSYDGSGVSGMYSSGYGGDYMS 756
Query: 720 RDYASSETYGGADPYSYPNSSRRM-NNGYANGRRPRTYY 607
R S++ G + YS SSR M +GY +YY
Sbjct: 757 R---SNDVAGSS--YSSAYSSRNMGGSGYMGSGDSGSYY 790
Score = 96.3 bits (238), Expect(2) = e-111
Identities = 45/62 (72%), Positives = 55/62 (88%)
Frame = -2
Query: 2330 GGLDRDAVEEDLWKVFSEVGDITEVRLMKNPLTKKNKGFGFVRFATTEQAKRAVNELKHP 2151
GGLD+DAVE+DL K+FS+VG++TEVRL+ NP TKKNKGF F+RFAT EQAKRA ELK+P
Sbjct: 215 GGLDKDAVEDDLRKIFSQVGEVTEVRLLMNPQTKKNKGFAFLRFATVEQAKRACIELKNP 274
Query: 2150 MV 2145
+V
Sbjct: 275 VV 276
>ref|XP_006338907.1| PREDICTED: nucleolin-like isoform X1 [Solanum tuberosum]
gi|565343580|ref|XP_006338908.1| PREDICTED:
nucleolin-like isoform X2 [Solanum tuberosum]
Length = 786
Score = 339 bits (870), Expect(2) = e-111
Identities = 231/571 (40%), Positives = 291/571 (50%), Gaps = 65/571 (11%)
Frame = -1
Query: 2124 VNGKQCGVCPSQDSDTLFIGNICKTWTKEAFKEKLAKYGVNNFEDLTLVEDVKNIGMNRG 1945
+NGKQCGV PSQD+DTLF+GNICKTWTKEA KEKL YGV+N EDLTLVED N GMNRG
Sbjct: 273 INGKQCGVSPSQDNDTLFLGNICKTWTKEALKEKLKHYGVDNTEDLTLVEDTNNEGMNRG 332
Query: 1944 FAFLEFSSRADALDACKHLQKMDVVFGTDRLAKVAFADTFIEPDDEIMAQVKKVFIDGLH 1765
FAFLEFSSR++A+DA K LQK DVVFG DR AKV+F D+FI+P DEIM+QVK VFIDGL
Sbjct: 333 FAFLEFSSRSEAMDAFKRLQKRDVVFGVDRPAKVSFEDSFIDPGDEIMSQVKTVFIDGLA 392
Query: 1764 AAWDEDRVRKHLRKFGRIEMVELARNMPAAKRTDFGFVTFDTHDAAVACVEGVNSAELCD 1585
+W+ED VR+ L+++G+I VELARN P+AKR DFGFVTFDTH+AAV C + +N+ EL +
Sbjct: 393 VSWNEDHVRELLKEYGKIRKVELARNRPSAKRKDFGFVTFDTHEAAVTCAKSINNEELGE 452
Query: 1584 GDDKVKVRARLTRPRQ--RGKLGNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHG 1411
GD+KVKVRARL+RP RGK G
Sbjct: 453 GDNKVKVRARLSRPLHMGRGKYGGR----------------------------------- 477
Query: 1410 GQGRQYVGDFKQSRGPWGRYTSINLAFDGA------------------------------ 1321
G+ R + S PWGR + + G
Sbjct: 478 GEFRPWRMPMHGSHAPWGRTAPYSRSIRGTRVSTCMPPVVGRGFKRPAALRDRHAEMALS 537
Query: 1320 -ESRRTWTSPQRPLGQSSPGTAYRKGTSTREHIRPDEHFPRPS----EFVARAPAERHLS 1156
R + P+R + P ++Y K RE+ R +E P S E+ +R ++R +S
Sbjct: 538 PRGRFMASPPRRSYDRRPPVSSYPKSNFKREYGRREEISPSRSRAIAEYPSRVHSDRRIS 597
Query: 1155 YRDIYPSRESGYMGNP--SQSGSRGA---------AHRPPPRHSKESYGRHMEQXXXXXX 1009
YRD Y SR SGY P + S +R A RPPP + +E GR +
Sbjct: 598 YRDEYSSRGSGYPELPRGTHSAARRAYVDDGYGQRFERPPPSY-REGRGREYDS------ 650
Query: 1008 XXXXXXXXXSKRPYLSVEEFHSDYIESMHRQPRARHDYR-----GANMDMVYGDTAYG-- 850
SKRPY +V++ H Y E+ R RAR DY G++ YGD+ G
Sbjct: 651 ------VSGSKRPYTAVDDVHPHYAEAGMRHSRARLDYELGSGSGSHYGDAYGDSRLGRS 704
Query: 849 -------SESARXXXXXXXXXXXXXXXFSDGTSRG-DTGRLY-SSYERDYNSRDYASSET 697
S + G+ G D G +Y SSY DY SR
Sbjct: 705 NLGYGGNRSSISRQDSHGIYSSRQGMGYGGGSYGGSDVGGMYSSSYGGDYMSR------- 757
Query: 696 YGGADPYSYPNSSRRM-NNGYANGRRPRTYY 607
G+D S SSR M +GY +YY
Sbjct: 758 --GSDVGSSVYSSRGMGGSGYMGSGGSGSYY 786
Score = 94.0 bits (232), Expect(2) = e-111
Identities = 45/62 (72%), Positives = 53/62 (85%)
Frame = -2
Query: 2330 GGLDRDAVEEDLWKVFSEVGDITEVRLMKNPLTKKNKGFGFVRFATTEQAKRAVNELKHP 2151
GGLD+DA EEDL KVFS+VG+ITEVRL+ N TKKNKGF F+RFAT EQAKRA ELK+P
Sbjct: 212 GGLDKDATEEDLRKVFSKVGEITEVRLLMNSQTKKNKGFAFLRFATVEQAKRACTELKNP 271
Query: 2150 MV 2145
++
Sbjct: 272 VI 273
>ref|XP_006354663.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like isoform X2
[Solanum tuberosum]
Length = 789
Score = 336 bits (861), Expect(2) = e-111
Identities = 232/578 (40%), Positives = 294/578 (50%), Gaps = 72/578 (12%)
Frame = -1
Query: 2124 VNGKQCGVCPSQDSDTLFIGNICKTWTKEAFKEKLAKYGVNNFEDLTLVEDVKNIGMNRG 1945
VNGK+CGV PSQDSDTLF+GNICK+WTKEA KEKL YG++N EDLTLVED N GMNRG
Sbjct: 276 VNGKKCGVSPSQDSDTLFLGNICKSWTKEALKEKLKHYGIDNVEDLTLVEDTNNEGMNRG 335
Query: 1944 FAFLEFSSRADALDACKHLQKMDVVFGTDRLAKVAFADTFIEPDDEIMAQVKKVFIDGLH 1765
FAFLEF SR++A+DA K LQK D+VFG DR AKV+FAD+FI+P DEIMAQVK +FIDGL
Sbjct: 336 FAFLEFPSRSEAMDAFKRLQKRDIVFGVDRPAKVSFADSFIDPGDEIMAQVKTIFIDGLS 395
Query: 1764 AAWDEDRVRKHLRKFGRIEMVELARNMPAAKRTDFGFVTFDTHDAAVACVEGVNSAELCD 1585
A+WDEDRVR L+++G+IE +ELARNMP+AKR DFGFV+FDTHDAAV CV+ +N+ EL +
Sbjct: 396 ASWDEDRVRDLLKQYGKIEKIELARNMPSAKRKDFGFVSFDTHDAAVICVKSINNEELGE 455
Query: 1584 GDDKVKVRARLTRPRQRGKLGNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGGQ 1405
GD KVKVRARL+RP QRG+
Sbjct: 456 GDKKVKVRARLSRPLQRGR----------------------------------------- 474
Query: 1404 GRQYVGDFKQSRG-------PWGRYTSINLAFDGA--------------------ESRRT 1306
GR D + RG PW R S L G+ RR
Sbjct: 475 GRYGARDLRPRRGLMRGPPAPWSRPVSRRLPVRGSRVSSRVPPLADRSFKRPVTMRDRRP 534
Query: 1305 WTSPQ-RPLGQSS--------PGTAYRKGTSTREHIRPDEHFPRPS----EFVARAPAER 1165
+P+ RP+ S P +Y K RE+ R +E P S ++ +R P++R
Sbjct: 535 VMAPRGRPMSPLSSRSYDRRPPVPSYSKSNLKREYARHEEIPPPRSRATVDYPSRFPSDR 594
Query: 1164 HLSYRDIYPSRESGYMGNPSQSGSRGAA-----------------HRPPPRHSKESYGRH 1036
+SYRD Y SR SGY P RG A RPPP + +E GR
Sbjct: 595 RVSYRDDYSSRSSGYSDFP-----RGTARTTTRRTYVDDDYEQRYERPPPAY-REGRGRE 648
Query: 1035 MEQXXXXXXXXXXXXXXXSKRPYLSVEEFHSDYIESMHRQPRARHDYR-GANMDMVYGDT 859
+ SKR Y ++++ Y ++ R R+R DY G YGD
Sbjct: 649 YDS------------TSGSKRSYSAMDDVPPRYADAGPRPSRSRLDYELGGASGTQYGDY 696
Query: 858 A-----------YGSESARXXXXXXXXXXXXXXXFSDGT--SRGDTGRLYSSYERDYNSR 718
+ GS ++ + G+ G +G S Y DY SR
Sbjct: 697 SDSRLGRSNAGYSGSRNSLSGQDSHGVYSSRQGGYGGGSYDGSGVSGMYSSGYGGDYMSR 756
Query: 717 DYASSETYGGADPYSYPNSSRRM-NNGYANGRRPRTYY 607
S++ G + YS SSR M +GY +YY
Sbjct: 757 ---SNDVAGSS--YSSAYSSRNMGGSGYMGSGDSGSYY 789
Score = 96.3 bits (238), Expect(2) = e-111
Identities = 45/62 (72%), Positives = 55/62 (88%)
Frame = -2
Query: 2330 GGLDRDAVEEDLWKVFSEVGDITEVRLMKNPLTKKNKGFGFVRFATTEQAKRAVNELKHP 2151
GGLD+DAVE+DL K+FS+VG++TEVRL+ NP TKKNKGF F+RFAT EQAKRA ELK+P
Sbjct: 215 GGLDKDAVEDDLRKIFSQVGEVTEVRLLMNPQTKKNKGFAFLRFATVEQAKRACIELKNP 274
Query: 2150 MV 2145
+V
Sbjct: 275 VV 276