BLASTX nr result
ID: Cocculus23_contig00002574
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00002574
(4804 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su... 1659 0.0
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 1626 0.0
ref|XP_006859038.1| hypothetical protein AMTR_s00068p00181410 [A... 1623 0.0
ref|XP_007025631.1| DNA-directed RNA polymerase family protein i... 1620 0.0
ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II su... 1615 0.0
ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citr... 1615 0.0
ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II su... 1611 0.0
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta... 1611 0.0
gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Mimulus... 1610 0.0
gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus not... 1610 0.0
ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su... 1605 0.0
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 1603 0.0
ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II su... 1603 0.0
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su... 1602 0.0
ref|XP_007138707.1| hypothetical protein PHAVU_009G230400g [Phas... 1602 0.0
ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II su... 1601 0.0
ref|XP_007214559.1| hypothetical protein PRUPE_ppa000425mg [Prun... 1600 0.0
ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phas... 1597 0.0
ref|XP_006650345.1| PREDICTED: DNA-directed RNA polymerase II su... 1596 0.0
gb|ABF97884.1| DNA-directed RNA polymerase II 135 kDa polypeptid... 1595 0.0
>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
vinifera] gi|147841183|emb|CAN72948.1| hypothetical
protein VITISV_033708 [Vitis vinifera]
gi|302143287|emb|CBI21848.3| unnamed protein product
[Vitis vinifera]
Length = 1193
Score = 1659 bits (4296), Expect = 0.0
Identities = 824/872 (94%), Positives = 845/872 (96%), Gaps = 4/872 (0%)
Frame = -2
Query: 3867 MYGGDEYDPTA----NDEDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 3700
MYG DEYDPT D+DEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV
Sbjct: 1 MYGEDEYDPTVVEEEEDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 60
Query: 3699 DESDDIIIRPESQHNPGRQSDFLETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRN 3520
DES DI IRPESQHNPGRQSDFLETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRN
Sbjct: 61 DESADIEIRPESQHNPGRQSDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN 120
Query: 3519 LTYSAPLYVDVTKQVMKKGHDGEEVTENPETIPKVFIGKVPIMLRSSYCTLYQNSEKDLT 3340
LTYSAPLYVDVTK+++KKGHD EEVTE E KVFIGKVPIMLRSSYCT+YQNSEKDLT
Sbjct: 121 LTYSAPLYVDVTKRIIKKGHDLEEVTETQE-FTKVFIGKVPIMLRSSYCTVYQNSEKDLT 179
Query: 3339 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRP 3160
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRP
Sbjct: 180 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 239
Query: 3159 PSSMFVRMLSRTSAKGGSSGQYIRATLPYIKQEIPIIVVFRALGFVADKDILEHICYDFS 2980
PSSMFVRMLSRTSAKGGSSGQYIRATLPYI+ EIPII+VFRALGFVADKDILEHICYDFS
Sbjct: 240 PSSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 299
Query: 2979 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGV 2800
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTR+KRIKYAKEILQKEMLPHVGV
Sbjct: 300 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGV 359
Query: 2799 GEYCETKKAYYFGYIVHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 2620
GEYCETKKAYYFGYI+HRLLLCA+GRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
Sbjct: 360 GEYCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 419
Query: 2619 DVKAYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2440
DV+AY QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 420 DVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 479
Query: 2439 YSSTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITV 2260
Y+STLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITV
Sbjct: 480 YASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITV 539
Query: 2259 GSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQV 2080
GSAANPILEFLEEWSTENFEEISPAVIPQ+TKIFVNGCWVGIHRNP+LLVKTLRQLRRQV
Sbjct: 540 GSAANPILEFLEEWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQV 599
Query: 2079 DVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPDDGGWH 1900
DVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKK+DIRALQ RESP+DGGWH
Sbjct: 600 DVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKRDIRALQLRESPEDGGWH 659
Query: 1899 DLVAKGFIEYVDXXXXXXTMISMTINDLITARLKPEEAYSETYTHCEIHPSLILGVCASI 1720
DLV+KGFIEYVD TMISMTINDLI+ARL PEEAYSETYTHCEIHPSLILGVCASI
Sbjct: 660 DLVSKGFIEYVDTEEEETTMISMTINDLISARLNPEEAYSETYTHCEIHPSLILGVCASI 719
Query: 1719 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1540
IPFPDHNQSPRNTYQSAMGKQAMGIYVTN+QLRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 720 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFR 779
Query: 1539 QLPAGINAIVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFG 1360
QLPAGINAIVAI CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FG
Sbjct: 780 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 839
Query: 1359 RPNRENTMGMRHGSYDKLDDDGLAPPGTRVSG 1264
RPNRENTMGMRHGSYDKLDDDGLAPPGTRVSG
Sbjct: 840 RPNRENTMGMRHGSYDKLDDDGLAPPGTRVSG 871
Score = 564 bits (1453), Expect = e-157
Identities = 273/278 (98%), Positives = 277/278 (99%)
Frame = -1
Query: 1249 TSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 1070
TSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 901 TSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 960
Query: 1069 MPWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 890
MPWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 961 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1020
Query: 889 LHKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 710
LHKCGYQMRGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1021 LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1080
Query: 709 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQICGLIAIANLKKNS 530
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC+ CGLIAIANLKKNS
Sbjct: 1081 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS 1140
Query: 529 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 416
FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML
Sbjct: 1141 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1178
>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 1626 bits (4211), Expect = 0.0
Identities = 799/864 (92%), Positives = 835/864 (96%)
Frame = -2
Query: 3855 DEYDPTANDEDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESDDIII 3676
+EYDPT DE+EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES DI I
Sbjct: 7 EEYDPTMEDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI 66
Query: 3675 RPESQHNPGRQSDFLETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 3496
RPESQHNPG QSDF ETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY
Sbjct: 67 RPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 126
Query: 3495 VDVTKQVMKKGHDGEEVTENPETIPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD 3316
VDVTK+V+KKGHDGEEVTE + KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD
Sbjct: 127 VDVTKRVIKKGHDGEEVTETQD-FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD 185
Query: 3315 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSSMFVRM 3136
QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS+MFVRM
Sbjct: 186 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRM 245
Query: 3135 LSRTSAKGGSSGQYIRATLPYIKQEIPIIVVFRALGFVADKDILEHICYDFSDTQMMELL 2956
LSRTSAKGGSSGQYIRATLPYI+ EIPII+VFRALGFVADKDILEHICYDF+DTQMMELL
Sbjct: 246 LSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELL 305
Query: 2955 RPSLEEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGEYCETKK 2776
RPSLEEAFVIQNQQVALDYIGKRG+TVGVT++KRIKYAKEILQKEMLPHVGVGEYCETKK
Sbjct: 306 RPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKK 365
Query: 2775 AYYFGYIVHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKAYAQK 2596
AYYFGYI+HRLLLCA+GRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+ Y QK
Sbjct: 366 AYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQK 425
Query: 2595 CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYSSTLSHL 2416
CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY+STLSHL
Sbjct: 426 CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHL 485
Query: 2415 RRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPIL 2236
RRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PIL
Sbjct: 486 RRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPIL 545
Query: 2235 EFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGV 2056
EFLEEW TENFEEISPAVIPQATKIFVNGCWVGIHR+P++LV+TLR+LRR+VDVNTEVGV
Sbjct: 546 EFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGV 605
Query: 2055 IRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPDDGGWHDLVAKGFI 1876
+RDIRLKELR+YTDYGRCSRPLFIVEKQRLLIK+KDI+ALQQRE+P+DGGWHDLVAKGFI
Sbjct: 606 VRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGFI 665
Query: 1875 EYVDXXXXXXTMISMTINDLITARLKPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ 1696
EY+D TMISMTINDL++ARL PEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ
Sbjct: 666 EYIDTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ 725
Query: 1695 SPRNTYQSAMGKQAMGIYVTNFQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 1516
SPRNTYQSAMGKQAMGIYVTN+Q RMDT+AYVLYYPQKPLVTTRAMEHLHFRQLPAGINA
Sbjct: 726 SPRNTYQSAMGKQAMGIYVTNYQFRMDTVAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 785
Query: 1515 IVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTM 1336
IVAI CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRP+R NTM
Sbjct: 786 IVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTM 845
Query: 1335 GMRHGSYDKLDDDGLAPPGTRVSG 1264
GMRHGSYDKLDDDGLAPPGTRVSG
Sbjct: 846 GMRHGSYDKLDDDGLAPPGTRVSG 869
Score = 558 bits (1437), Expect = e-155
Identities = 268/278 (96%), Positives = 277/278 (99%)
Frame = -1
Query: 1249 TSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 1070
TSLRHSE+GMVDQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 899 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 958
Query: 1069 MPWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 890
MPWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 959 MPWTMEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1018
Query: 889 LHKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 710
LHKCGYQMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1019 LHKCGYQMRGFETMYNGHTGRRLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1078
Query: 709 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQICGLIAIANLKKNS 530
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVC+ CGLIAIANLKKNS
Sbjct: 1079 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNS 1138
Query: 529 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 416
FECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRML
Sbjct: 1139 FECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRML 1176
>ref|XP_006859038.1| hypothetical protein AMTR_s00068p00181410 [Amborella trichopoda]
gi|548863150|gb|ERN20505.1| hypothetical protein
AMTR_s00068p00181410 [Amborella trichopoda]
Length = 1190
Score = 1623 bits (4204), Expect = 0.0
Identities = 806/868 (92%), Positives = 840/868 (96%)
Frame = -2
Query: 3867 MYGGDEYDPTANDEDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESD 3688
M GG++ D +EDEEITQEDAWAVISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDES
Sbjct: 1 MSGGEDDDYV--NEDEEITQEDAWAVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDESA 58
Query: 3687 DIIIRPESQHNPGRQSDFLETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 3508
DI IRPESQHNPGRQ+DF+ETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYS
Sbjct: 59 DIEIRPESQHNPGRQADFVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 118
Query: 3507 APLYVDVTKQVMKKGHDGEEVTENPETIPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGE 3328
APLYVDVTK+V+KKGHD EE+ E E + KVFIGKVPIMLRSSYCTL+QNSEKDLTELGE
Sbjct: 119 APLYVDVTKRVIKKGHDHEELAEQQE-LTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGE 177
Query: 3327 CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSSM 3148
CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QN+PPSSM
Sbjct: 178 CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNKPPSSM 237
Query: 3147 FVRMLSRTSAKGGSSGQYIRATLPYIKQEIPIIVVFRALGFVADKDILEHICYDFSDTQM 2968
FVRMLSRTS+KGGSSGQYIRATLPYI+ EIPII+VFRALGFVADKDILEHICYDFSDTQM
Sbjct: 238 FVRMLSRTSSKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQM 297
Query: 2967 MELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGEYC 2788
MELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVT++KRIKYAKEILQKEMLPHVGVGEYC
Sbjct: 298 MELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYC 357
Query: 2787 ETKKAYYFGYIVHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKA 2608
ETKKAYYFGYI+HRLL+CA+GRRPEDDRDHYGNKRLDLAGPLLG LFR +FRKLTRDV++
Sbjct: 358 ETKKAYYFGYIIHRLLVCALGRRPEDDRDHYGNKRLDLAGPLLGSLFRTMFRKLTRDVRS 417
Query: 2607 YAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYSST 2428
Y QKCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT++ST
Sbjct: 418 YVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFAST 477
Query: 2427 LSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA 2248
LSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA
Sbjct: 478 LSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA 537
Query: 2247 NPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNT 2068
NPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNT
Sbjct: 538 NPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNT 597
Query: 2067 EVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPDDGGWHDLVA 1888
EVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKK DIRALQQRESPD+ GWHDLVA
Sbjct: 598 EVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKSDIRALQQRESPDE-GWHDLVA 656
Query: 1887 KGFIEYVDXXXXXXTMISMTINDLITARLKPEEAYSETYTHCEIHPSLILGVCASIIPFP 1708
KGFIEYVD TMISMTI+DL++ARL PEEAYSETYTHCEIHPSLILGVCASIIPFP
Sbjct: 657 KGFIEYVDTEEEETTMISMTISDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFP 716
Query: 1707 DHNQSPRNTYQSAMGKQAMGIYVTNFQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 1528
DHNQSPRNTYQSAMGKQAMGIYVTN+QLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA
Sbjct: 717 DHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 776
Query: 1527 GINAIVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNR 1348
GINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNR
Sbjct: 777 GINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 836
Query: 1347 ENTMGMRHGSYDKLDDDGLAPPGTRVSG 1264
ENTMGMRHGSYDKLDDDGLAPPGTRVSG
Sbjct: 837 ENTMGMRHGSYDKLDDDGLAPPGTRVSG 864
Score = 563 bits (1451), Expect = e-157
Identities = 272/277 (98%), Positives = 276/277 (99%)
Frame = -1
Query: 1249 TSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 1070
TSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 894 TSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 953
Query: 1069 MPWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 890
MPWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 954 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1013
Query: 889 LHKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 710
LHKCGYQMRGFETMYNGHTGR+LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1014 LHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1073
Query: 709 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQICGLIAIANLKKNS 530
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC+ CGLIAIANLKKNS
Sbjct: 1074 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEQCGLIAIANLKKNS 1133
Query: 529 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM 419
FECRGCKNKTDI+QVHIPYACKLLFQELMAMAIAPRM
Sbjct: 1134 FECRGCKNKTDIIQVHIPYACKLLFQELMAMAIAPRM 1170
>ref|XP_007025631.1| DNA-directed RNA polymerase family protein isoform 1 [Theobroma
cacao] gi|508780997|gb|EOY28253.1| DNA-directed RNA
polymerase family protein isoform 1 [Theobroma cacao]
Length = 1189
Score = 1620 bits (4194), Expect = 0.0
Identities = 801/870 (92%), Positives = 832/870 (95%), Gaps = 2/870 (0%)
Frame = -2
Query: 3867 MYGGDEYDPTANDE--DEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 3694
M EYDP D+ DEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MEDDSEYDPQLMDDEDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 3693 SDDIIIRPESQHNPGRQSDFLETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLT 3514
S DI IRPESQHNPG QSDF ETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61 SADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120
Query: 3513 YSAPLYVDVTKQVMKKGHDGEEVTENPETIPKVFIGKVPIMLRSSYCTLYQNSEKDLTEL 3334
YSAPLYVDVTK+V+KKGHDGEEVTE + KVFIGKVPIMLRSSYCTLYQNSEKDLTEL
Sbjct: 121 YSAPLYVDVTKRVIKKGHDGEEVTETQD-FTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL 179
Query: 3333 GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPS 3154
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS
Sbjct: 180 GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS 239
Query: 3153 SMFVRMLSRTSAKGGSSGQYIRATLPYIKQEIPIIVVFRALGFVADKDILEHICYDFSDT 2974
+MFVRMLSRTSAKGGSSGQYIRATLPYI+ EIPII+VFRALGFVADKDILEHICYDFSDT
Sbjct: 240 TMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDT 299
Query: 2973 QMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGE 2794
QMMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVTR+KRIKYAKEILQKEMLPHVGVG+
Sbjct: 300 QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGD 359
Query: 2793 YCETKKAYYFGYIVHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV 2614
+CETKKAYYFGYI+HRLLLCA+GRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV
Sbjct: 360 FCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV 419
Query: 2613 KAYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYS 2434
++Y QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY+
Sbjct: 420 RSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA 479
Query: 2433 STLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS 2254
STLSHLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS
Sbjct: 480 STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS 539
Query: 2253 AANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDV 2074
AA PILEFLEEW TENFEEISPAVIPQATKIFVNGCWVG+HRNP++LV TLR+LRR+VDV
Sbjct: 540 AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDV 599
Query: 2073 NTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPDDGGWHDL 1894
NTEVGV+RDIRLKELR+YTDYGRCSRPLFIVEKQRLLIKKKDI ALQQRESP+DGGWHDL
Sbjct: 600 NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDL 659
Query: 1893 VAKGFIEYVDXXXXXXTMISMTINDLITARLKPEEAYSETYTHCEIHPSLILGVCASIIP 1714
VAKGFIEY+D TMISMTINDL+ AR+ PEEAYSETYTHCEIHPSLILGVCASIIP
Sbjct: 660 VAKGFIEYIDTEEEETTMISMTINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIP 719
Query: 1713 FPDHNQSPRNTYQSAMGKQAMGIYVTNFQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL 1534
FPDHNQSPRNTYQSAMGKQAMGIYVTN+Q RMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
Sbjct: 720 FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL 779
Query: 1533 PAGINAIVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRP 1354
PAGINAIVAI CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRP
Sbjct: 780 PAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP 839
Query: 1353 NRENTMGMRHGSYDKLDDDGLAPPGTRVSG 1264
+R NTMGMRHGSYDKLDDDGLAPPGTRVSG
Sbjct: 840 DRANTMGMRHGSYDKLDDDGLAPPGTRVSG 869
Score = 555 bits (1431), Expect = e-155
Identities = 268/277 (96%), Positives = 276/277 (99%)
Frame = -1
Query: 1246 SLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 1067
SLRHSE+G+VDQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
Sbjct: 900 SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 959
Query: 1066 PWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 887
PWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+AL
Sbjct: 960 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRAL 1019
Query: 886 HKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 707
HKCGYQMRGFETMYNGHTGR+LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
Sbjct: 1020 HKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 1079
Query: 706 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQICGLIAIANLKKNSF 527
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC+ CGLIAIANLKKNSF
Sbjct: 1080 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF 1139
Query: 526 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 416
ECRGCKNKTDIVQV+IPYACKLLFQELMAMAIAPRML
Sbjct: 1140 ECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRML 1176
>ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Citrus
sinensis]
Length = 1195
Score = 1615 bits (4183), Expect = 0.0
Identities = 796/864 (92%), Positives = 830/864 (96%)
Frame = -2
Query: 3855 DEYDPTANDEDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESDDIII 3676
+++ DE+EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES DI I
Sbjct: 10 EQHQQEEEDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI 69
Query: 3675 RPESQHNPGRQSDFLETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 3496
RPESQHNPG+QSDF ETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY
Sbjct: 70 RPESQHNPGQQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 129
Query: 3495 VDVTKQVMKKGHDGEEVTENPETIPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD 3316
VDVTK+V+KKGHDGEEVTE + KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD
Sbjct: 130 VDVTKRVIKKGHDGEEVTETQD-FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD 188
Query: 3315 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSSMFVRM 3136
QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS+MFVRM
Sbjct: 189 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRM 248
Query: 3135 LSRTSAKGGSSGQYIRATLPYIKQEIPIIVVFRALGFVADKDILEHICYDFSDTQMMELL 2956
LSRTSAKGGSSGQYIRATLPYI+ EIPII+VFRALGFVADKDILEHICYDF DTQMMELL
Sbjct: 249 LSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELL 308
Query: 2955 RPSLEEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGEYCETKK 2776
RPSLEEAFVIQNQQVALDYIGKRG+TVGVTRDKRIKYAKEILQKEMLPHVG G++CETKK
Sbjct: 309 RPSLEEAFVIQNQQVALDYIGKRGATVGVTRDKRIKYAKEILQKEMLPHVGTGDFCETKK 368
Query: 2775 AYYFGYIVHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKAYAQK 2596
AYYFGYI+HRLLLCA+GRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+AY QK
Sbjct: 369 AYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQK 428
Query: 2595 CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYSSTLSHL 2416
CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY+STLSHL
Sbjct: 429 CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHL 488
Query: 2415 RRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPIL 2236
RRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PIL
Sbjct: 489 RRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPIL 548
Query: 2235 EFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGV 2056
EFLEEW TENFEEISPAVIPQATKIFVNGCWVGIHR+PE+LVKTLR+LRR+VDVNTEVGV
Sbjct: 549 EFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGV 608
Query: 2055 IRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPDDGGWHDLVAKGFI 1876
+RDIRLKELR+YTDYGRCSRPLFIVEKQRLLIKK+DI ALQQRESP+DGGWHDLVAKGFI
Sbjct: 609 VRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGFI 668
Query: 1875 EYVDXXXXXXTMISMTINDLITARLKPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ 1696
EY+D TMISMTINDL+ ARL PEEAY++TYTHCEIHPSLILGVCASIIPFPDHNQ
Sbjct: 669 EYIDTEEEETTMISMTINDLVQARLHPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQ 728
Query: 1695 SPRNTYQSAMGKQAMGIYVTNFQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 1516
SPRNTYQSAMGKQAMGIYVTN+Q RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA
Sbjct: 729 SPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 788
Query: 1515 IVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTM 1336
IVAI CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRP+R NTM
Sbjct: 789 IVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTM 848
Query: 1335 GMRHGSYDKLDDDGLAPPGTRVSG 1264
GMRHGSYDKLDDDGLAPPGTRVSG
Sbjct: 849 GMRHGSYDKLDDDGLAPPGTRVSG 872
Score = 559 bits (1441), Expect = e-156
Identities = 270/277 (97%), Positives = 276/277 (99%)
Frame = -1
Query: 1246 SLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 1067
SLRHSE+GMVDQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
Sbjct: 903 SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 962
Query: 1066 PWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 887
PWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL
Sbjct: 963 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 1022
Query: 886 HKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 707
HKCGYQMRGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
Sbjct: 1023 HKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 1082
Query: 706 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQICGLIAIANLKKNSF 527
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC+ CGLIAIANLKKNSF
Sbjct: 1083 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKNSF 1142
Query: 526 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 416
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML
Sbjct: 1143 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1179
>ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citrus clementina]
gi|557525528|gb|ESR36834.1| hypothetical protein
CICLE_v10027701mg [Citrus clementina]
Length = 1195
Score = 1615 bits (4183), Expect = 0.0
Identities = 796/864 (92%), Positives = 830/864 (96%)
Frame = -2
Query: 3855 DEYDPTANDEDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESDDIII 3676
+++ DE+EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES DI I
Sbjct: 10 EQHQQEEEDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI 69
Query: 3675 RPESQHNPGRQSDFLETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 3496
RPESQHNPG+QSDF ETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY
Sbjct: 70 RPESQHNPGQQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 129
Query: 3495 VDVTKQVMKKGHDGEEVTENPETIPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD 3316
VDVTK+V+KKGHDGEEVTE + KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD
Sbjct: 130 VDVTKRVIKKGHDGEEVTETQD-FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD 188
Query: 3315 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSSMFVRM 3136
QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS+MFVRM
Sbjct: 189 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRM 248
Query: 3135 LSRTSAKGGSSGQYIRATLPYIKQEIPIIVVFRALGFVADKDILEHICYDFSDTQMMELL 2956
LSRTSAKGGSSGQYIRATLPYI+ EIPII+VFRALGFVADKDILEHICYDF DTQMMELL
Sbjct: 249 LSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELL 308
Query: 2955 RPSLEEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGEYCETKK 2776
RPSLEEAFVIQNQQVALDYIGKRG+TVGVTRDKRIKYAKEILQKEMLPHVG G++CETKK
Sbjct: 309 RPSLEEAFVIQNQQVALDYIGKRGATVGVTRDKRIKYAKEILQKEMLPHVGTGDFCETKK 368
Query: 2775 AYYFGYIVHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKAYAQK 2596
AYYFGYI+HRLLLCA+GRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+AY QK
Sbjct: 369 AYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQK 428
Query: 2595 CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYSSTLSHL 2416
CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY+STLSHL
Sbjct: 429 CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHL 488
Query: 2415 RRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPIL 2236
RRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PIL
Sbjct: 489 RRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPIL 548
Query: 2235 EFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGV 2056
EFLEEW TENFEEISPAVIPQATKIFVNGCWVGIHR+PE+LVKTLR+LRR+VDVNTEVGV
Sbjct: 549 EFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGV 608
Query: 2055 IRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPDDGGWHDLVAKGFI 1876
+RDIRLKELR+YTDYGRCSRPLFIVEKQRLLIKK+DI ALQQRESP+DGGWHDLVAKGFI
Sbjct: 609 VRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGFI 668
Query: 1875 EYVDXXXXXXTMISMTINDLITARLKPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ 1696
EY+D TMISMTINDL+ ARL PEEAY++TYTHCEIHPSLILGVCASIIPFPDHNQ
Sbjct: 669 EYIDTEEEETTMISMTINDLVQARLHPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQ 728
Query: 1695 SPRNTYQSAMGKQAMGIYVTNFQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 1516
SPRNTYQSAMGKQAMGIYVTN+Q RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA
Sbjct: 729 SPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 788
Query: 1515 IVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTM 1336
IVAI CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRP+R NTM
Sbjct: 789 IVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTM 848
Query: 1335 GMRHGSYDKLDDDGLAPPGTRVSG 1264
GMRHGSYDKLDDDGLAPPGTRVSG
Sbjct: 849 GMRHGSYDKLDDDGLAPPGTRVSG 872
Score = 558 bits (1438), Expect = e-156
Identities = 269/277 (97%), Positives = 276/277 (99%)
Frame = -1
Query: 1246 SLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 1067
SLRHSE+GMVDQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
Sbjct: 903 SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 962
Query: 1066 PWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 887
PWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL
Sbjct: 963 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 1022
Query: 886 HKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 707
HKCGYQMRGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
Sbjct: 1023 HKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 1082
Query: 706 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQICGLIAIANLKKNSF 527
EGRSRDGGLRFGEMERDCMIAHGA+HFLKERLFDQSDAYRVHVC+ CGLIAIANLKKNSF
Sbjct: 1083 EGRSRDGGLRFGEMERDCMIAHGASHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKNSF 1142
Query: 526 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 416
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML
Sbjct: 1143 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1179
>ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
sativus] gi|449479313|ref|XP_004155566.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
sativus]
Length = 1199
Score = 1611 bits (4172), Expect = 0.0
Identities = 796/868 (91%), Positives = 829/868 (95%)
Frame = -2
Query: 3867 MYGGDEYDPTANDEDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESD 3688
M D+ D D++EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES
Sbjct: 11 MNDDDDMDQAIPDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA 70
Query: 3687 DIIIRPESQHNPGRQSDFLETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 3508
DI IRPESQHNPG QSD ETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYS
Sbjct: 71 DIEIRPESQHNPGHQSDVAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 130
Query: 3507 APLYVDVTKQVMKKGHDGEEVTENPETIPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGE 3328
APLYVDV+K+V+KKGHDGEEVTE + KVFIGKVPIMLRSSYCTLYQNSEKDLTELGE
Sbjct: 131 APLYVDVSKRVIKKGHDGEEVTETQD-FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGE 189
Query: 3327 CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSSM 3148
CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPS+M
Sbjct: 190 CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTM 249
Query: 3147 FVRMLSRTSAKGGSSGQYIRATLPYIKQEIPIIVVFRALGFVADKDILEHICYDFSDTQM 2968
FVRMLSRTSAKGGSSGQYIRATLPYI+ EIPII+VFRALGFVADKDILEHICYDFSDTQM
Sbjct: 250 FVRMLSRTSAKGGSSGQYIRATLPYIRNEIPIIIVFRALGFVADKDILEHICYDFSDTQM 309
Query: 2967 MELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGEYC 2788
MELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVT++KRIKYAKEILQKEMLPHVGVGE+C
Sbjct: 310 MELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEFC 369
Query: 2787 ETKKAYYFGYIVHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKA 2608
ETKKAYYFGYI+HRLLLCA+GRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+
Sbjct: 370 ETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRG 429
Query: 2607 YAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYSST 2428
Y QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY+ST
Sbjct: 430 YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAST 489
Query: 2427 LSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA 2248
LSHLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA
Sbjct: 490 LSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAA 549
Query: 2247 NPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNT 2068
PILEFLEEW TENFEEISPAVIPQATKIFVNGCWVGIHR+PE+LVKTLR+LRR+VDVNT
Sbjct: 550 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNT 609
Query: 2067 EVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPDDGGWHDLVA 1888
EVGV+RDIRLKELR+YTDYGRCSRPLFIVEKQRLLIKKKDI ALQQRESP+DGGWHDLVA
Sbjct: 610 EVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVA 669
Query: 1887 KGFIEYVDXXXXXXTMISMTINDLITARLKPEEAYSETYTHCEIHPSLILGVCASIIPFP 1708
KGFIEY+D TMISMTI+DLI AR+ P EAYS+TYTHCEIHPSLILGVCASIIPFP
Sbjct: 670 KGFIEYIDTEEEETTMISMTISDLIQARINPVEAYSDTYTHCEIHPSLILGVCASIIPFP 729
Query: 1707 DHNQSPRNTYQSAMGKQAMGIYVTNFQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 1528
DHNQSPRNTYQSAMGKQAMGIYVTN+Q RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA
Sbjct: 730 DHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 789
Query: 1527 GINAIVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNR 1348
GINAIVAI CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRP+R
Sbjct: 790 GINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 849
Query: 1347 ENTMGMRHGSYDKLDDDGLAPPGTRVSG 1264
NTMGMRHGSYDKLDDDGLAPPGTRVSG
Sbjct: 850 SNTMGMRHGSYDKLDDDGLAPPGTRVSG 877
Score = 553 bits (1426), Expect = e-154
Identities = 266/276 (96%), Positives = 275/276 (99%)
Frame = -1
Query: 1246 SLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 1067
SLRHSE+G+VDQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
Sbjct: 908 SLRHSENGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 967
Query: 1066 PWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 887
PWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL
Sbjct: 968 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 1027
Query: 886 HKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 707
HKCGYQMRGFETMYNGHTGR+LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
Sbjct: 1028 HKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 1087
Query: 706 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQICGLIAIANLKKNSF 527
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVC+ CGLIAIANLKK+SF
Sbjct: 1088 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCECCGLIAIANLKKSSF 1147
Query: 526 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM 419
ECRGCKNKTDIVQV+IPYACKLLFQELMAMAIAPRM
Sbjct: 1148 ECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRM 1183
>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
II subunit, putative [Ricinus communis]
Length = 1194
Score = 1611 bits (4171), Expect = 0.0
Identities = 800/873 (91%), Positives = 832/873 (95%), Gaps = 5/873 (0%)
Frame = -2
Query: 3867 MYGGDEYDPTAN----DEDE-EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 3703
M EYD N DEDE EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MEDDQEYDQNLNEDYEDEDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3702 VDESDDIIIRPESQHNPGRQSDFLETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLR 3523
VDES DI IRPESQHNPG QSDF ETIYKI FGQIYLSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3522 NLTYSAPLYVDVTKQVMKKGHDGEEVTENPETIPKVFIGKVPIMLRSSYCTLYQNSEKDL 3343
NLTYSAPLYVDVTK+V+KKGHDGEEVTE + KVFIGKVPIMLRSSYCTLYQNSEKDL
Sbjct: 121 NLTYSAPLYVDVTKRVIKKGHDGEEVTETQD-FTKVFIGKVPIMLRSSYCTLYQNSEKDL 179
Query: 3342 TELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNR 3163
TELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNR
Sbjct: 180 TELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNR 239
Query: 3162 PPSSMFVRMLSRTSAKGGSSGQYIRATLPYIKQEIPIIVVFRALGFVADKDILEHICYDF 2983
PPS+MFVRMLSRTSAKGGSSGQYIRATLPYI+ EIPII+VFRALGFVADKDILEHICYDF
Sbjct: 240 PPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF 299
Query: 2982 SDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVG 2803
SDTQMMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVT++KRIKYAKEILQKEMLPHVG
Sbjct: 300 SDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVG 359
Query: 2802 VGEYCETKKAYYFGYIVHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLT 2623
VGEYCETKKAYYFGYI+HRLLLCA+GRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLT
Sbjct: 360 VGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLT 419
Query: 2622 RDVKAYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRL 2443
RDV++Y QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRL
Sbjct: 420 RDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRL 479
Query: 2442 TYSSTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYIT 2263
TY+STLSHLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYIT
Sbjct: 480 TYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYIT 539
Query: 2262 VGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQ 2083
VGSAA PILEFLEEW TENFEEISPAVIPQATKIFVNGCWVGIHR+P++LVKTLR+LRR+
Sbjct: 540 VGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRR 599
Query: 2082 VDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPDDGGW 1903
VDVNTEVGV+RDIRLKELR+YTDYGRCSRPLFIVEKQRLLIKKKDI ALQQRES ++GGW
Sbjct: 600 VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGW 659
Query: 1902 HDLVAKGFIEYVDXXXXXXTMISMTINDLITARLKPEEAYSETYTHCEIHPSLILGVCAS 1723
HDLVAKGFIEY+D TMISMTI+DL+ AR+ PEEAYS+TYTHCEIHPSLILGVCAS
Sbjct: 660 HDLVAKGFIEYIDTEEEETTMISMTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCAS 719
Query: 1722 IIPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQLRMDTLAYVLYYPQKPLVTTRAMEHLHF 1543
IIPFPDHNQSPRNTYQSAMGKQAMGIYVTN+Q RMDTLAYVLYYPQKPLVTTRAMEHLHF
Sbjct: 720 IIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHF 779
Query: 1542 RQLPAGINAIVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEF 1363
RQLPAGINAIVAI CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+F
Sbjct: 780 RQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDF 839
Query: 1362 GRPNRENTMGMRHGSYDKLDDDGLAPPGTRVSG 1264
GRP+R NTMGMRHGSYDKLDDDGLAPPGTRVSG
Sbjct: 840 GRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSG 872
Score = 558 bits (1437), Expect = e-155
Identities = 269/277 (97%), Positives = 276/277 (99%)
Frame = -1
Query: 1246 SLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 1067
SLRHSE+G+VDQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
Sbjct: 903 SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 962
Query: 1066 PWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 887
PWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL
Sbjct: 963 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 1022
Query: 886 HKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 707
HKCGYQMRGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
Sbjct: 1023 HKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 1082
Query: 706 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQICGLIAIANLKKNSF 527
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC+ CGLIAIANLKKNSF
Sbjct: 1083 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF 1142
Query: 526 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 416
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML
Sbjct: 1143 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1179
>gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Mimulus guttatus]
Length = 1197
Score = 1610 bits (4169), Expect = 0.0
Identities = 793/867 (91%), Positives = 830/867 (95%)
Frame = -2
Query: 3864 YGGDEYDPTANDEDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESDD 3685
Y +E++ +++EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES D
Sbjct: 12 YPDEEFE---EEDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAD 68
Query: 3684 IIIRPESQHNPGRQSDFLETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSA 3505
I IRPESQHNPG Q DF ETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSA
Sbjct: 69 IEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSA 128
Query: 3504 PLYVDVTKQVMKKGHDGEEVTENPETIPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGEC 3325
PLYVDVTK+V+KKGHDGEEVTE + KVFIGKVPIMLRSSYCTLYQNSEKDLTELGEC
Sbjct: 129 PLYVDVTKRVIKKGHDGEEVTETQD-FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGEC 187
Query: 3324 PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSSMF 3145
PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE QNRPPS+MF
Sbjct: 188 PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMF 247
Query: 3144 VRMLSRTSAKGGSSGQYIRATLPYIKQEIPIIVVFRALGFVADKDILEHICYDFSDTQMM 2965
+RML+RTSAKGGSSGQYIRATLPYI+ EIPII+VFRALGFVADKDILEHICY+F DTQMM
Sbjct: 248 IRMLARTSAKGGSSGQYIRATLPYIRSEIPIIIVFRALGFVADKDILEHICYNFQDTQMM 307
Query: 2964 ELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGEYCE 2785
ELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVTRD+RIKYAKEILQKEMLPHVGVGEYCE
Sbjct: 308 ELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTRDRRIKYAKEILQKEMLPHVGVGEYCE 367
Query: 2784 TKKAYYFGYIVHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKAY 2605
TKKAYYFGYI+HRLLLCA+GRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+ Y
Sbjct: 368 TKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGY 427
Query: 2604 AQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYSSTL 2425
QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY+STL
Sbjct: 428 VQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTL 487
Query: 2424 SHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAN 2245
SHLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA
Sbjct: 488 SHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAY 547
Query: 2244 PILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTE 2065
PILEFLEEW TENFEEISPAVIPQATKIFVNGCWVGIHRNP++LV TLR+LRR+VDVNTE
Sbjct: 548 PILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTLRRLRRRVDVNTE 607
Query: 2064 VGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPDDGGWHDLVAK 1885
VGV+RDIRLKELR+YTDYGRCSRPLFIVEKQRLLIKKKDI+ALQQRESPDDGGWHDLVAK
Sbjct: 608 VGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAK 667
Query: 1884 GFIEYVDXXXXXXTMISMTINDLITARLKPEEAYSETYTHCEIHPSLILGVCASIIPFPD 1705
GFIEY+D TMISMTINDL++AR+ P EAYS+TYTHCEIHPSLILGVCASIIPFPD
Sbjct: 668 GFIEYIDTEEEETTMISMTINDLVSARINPGEAYSDTYTHCEIHPSLILGVCASIIPFPD 727
Query: 1704 HNQSPRNTYQSAMGKQAMGIYVTNFQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 1525
HNQSPRNTYQSAMGKQAMGIYVTN+Q RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG
Sbjct: 728 HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 787
Query: 1524 INAIVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRE 1345
INAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRP+R
Sbjct: 788 INAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA 847
Query: 1344 NTMGMRHGSYDKLDDDGLAPPGTRVSG 1264
NTMGMRHGSYDKLDDDGLAPPGTRVSG
Sbjct: 848 NTMGMRHGSYDKLDDDGLAPPGTRVSG 874
Score = 553 bits (1426), Expect = e-154
Identities = 265/278 (95%), Positives = 275/278 (98%)
Frame = -1
Query: 1249 TSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 1070
TSLRHSE+GMVDQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 905 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 964
Query: 1069 MPWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 890
MPWT+EGI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 965 MPWTLEGINPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKA 1024
Query: 889 LHKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 710
LHKCGYQMRG+ETMYNGHTGRKL++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1025 LHKCGYQMRGYETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1084
Query: 709 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQICGLIAIANLKKNS 530
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVC+ CGLIAIANLKKNS
Sbjct: 1085 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCEKCGLIAIANLKKNS 1144
Query: 529 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 416
FECR CKNKTDIVQVHIPYACKLLFQELM+MAIAPRML
Sbjct: 1145 FECRACKNKTDIVQVHIPYACKLLFQELMSMAIAPRML 1182
>gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
Length = 1193
Score = 1610 bits (4169), Expect = 0.0
Identities = 794/866 (91%), Positives = 830/866 (95%), Gaps = 3/866 (0%)
Frame = -2
Query: 3852 EYDPTANDED---EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESDDI 3682
EYD ND+D EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES DI
Sbjct: 6 EYDQQYNDDDDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 65
Query: 3681 IIRPESQHNPGRQSDFLETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 3502
IRPESQHNPG QSDF+ETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 66 EIRPESQHNPGHQSDFVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 125
Query: 3501 LYVDVTKQVMKKGHDGEEVTENPETIPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP 3322
LYVDVTK+V+KKGHDGEEVTE + KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP
Sbjct: 126 LYVDVTKRVIKKGHDGEEVTETQD-FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP 184
Query: 3321 YDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSSMFV 3142
YDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS+MFV
Sbjct: 185 YDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFV 244
Query: 3141 RMLSRTSAKGGSSGQYIRATLPYIKQEIPIIVVFRALGFVADKDILEHICYDFSDTQMME 2962
RMLSRTS+KGGSSGQYIRATLPYI+ EIPII+VFRALGFVADKDILEHICYDFSDTQMME
Sbjct: 245 RMLSRTSSKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMME 304
Query: 2961 LLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGEYCET 2782
LLRPSLEEAFVIQNQQVALDYIGKRG+TVGVT++KRIKYAKEILQKEMLPHVG GE+CET
Sbjct: 305 LLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGTGEFCET 364
Query: 2781 KKAYYFGYIVHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKAYA 2602
KKAYYFGYI+HRLLLCA+GRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+ Y
Sbjct: 365 KKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYV 424
Query: 2601 QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYSSTLS 2422
QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY+STLS
Sbjct: 425 QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLS 484
Query: 2421 HLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANP 2242
HLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA P
Sbjct: 485 HLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYP 544
Query: 2241 ILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEV 2062
ILEFLEEW TENFEEISPAVIPQATKIFVNGCWVGIHR+P++LVKTLR+LRR+VDVNTEV
Sbjct: 545 ILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEV 604
Query: 2061 GVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPDDGGWHDLVAKG 1882
GV+RDIRLKELR+YTDYGRCSRPLFIVEKQRLLIKK+DIRALQQRE+P++ GWHDLV+ G
Sbjct: 605 GVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIRALQQRETPEEAGWHDLVSNG 664
Query: 1881 FIEYVDXXXXXXTMISMTINDLITARLKPEEAYSETYTHCEIHPSLILGVCASIIPFPDH 1702
FIEY+D TMISMTINDL+ ARL PEEAYSETYTHCEIHPSLILGVCASIIPFPDH
Sbjct: 665 FIEYIDTEEEETTMISMTINDLVQARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDH 724
Query: 1701 NQSPRNTYQSAMGKQAMGIYVTNFQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI 1522
NQSPRNTYQSAMGKQAMGIYVTN+Q RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI
Sbjct: 725 NQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI 784
Query: 1521 NAIVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNREN 1342
NAIVAI CYSGYNQEDSVIMNQS+IDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRP+R N
Sbjct: 785 NAIVAIACYSGYNQEDSVIMNQSAIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSN 844
Query: 1341 TMGMRHGSYDKLDDDGLAPPGTRVSG 1264
TMGMRHGSYDKLDDDGLAPPGTRVSG
Sbjct: 845 TMGMRHGSYDKLDDDGLAPPGTRVSG 870
Score = 557 bits (1436), Expect = e-155
Identities = 268/277 (96%), Positives = 276/277 (99%)
Frame = -1
Query: 1246 SLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 1067
SLRHSE+G+VDQVLLTTNADGLRFVKVR+RS+RIPQIGDKFSSRHGQKGTVGMTYTQEDM
Sbjct: 902 SLRHSENGIVDQVLLTTNADGLRFVKVRVRSIRIPQIGDKFSSRHGQKGTVGMTYTQEDM 961
Query: 1066 PWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 887
PWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL
Sbjct: 962 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 1021
Query: 886 HKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 707
HKCGYQMRGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
Sbjct: 1022 HKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 1081
Query: 706 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQICGLIAIANLKKNSF 527
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC+ CGLIAIANLKKNSF
Sbjct: 1082 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF 1141
Query: 526 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 416
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML
Sbjct: 1142 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1178
>ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Solanum
tuberosum]
Length = 1191
Score = 1605 bits (4155), Expect = 0.0
Identities = 792/866 (91%), Positives = 830/866 (95%), Gaps = 2/866 (0%)
Frame = -2
Query: 3855 DEYDPTAN--DEDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESDDI 3682
DEY+P N D++EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES DI
Sbjct: 5 DEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 64
Query: 3681 IIRPESQHNPGRQSDFLETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 3502
IRPESQHNPG QSDF ETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 65 EIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 124
Query: 3501 LYVDVTKQVMKKGHDGEEVTENPETIPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP 3322
LYVDVTK+V+KKGHDGEEVTE + KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP
Sbjct: 125 LYVDVTKRVIKKGHDGEEVTETQD-FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP 183
Query: 3321 YDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSSMFV 3142
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPS+MFV
Sbjct: 184 LDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFV 243
Query: 3141 RMLSRTSAKGGSSGQYIRATLPYIKQEIPIIVVFRALGFVADKDILEHICYDFSDTQMME 2962
RMLSRTSAKGGSSGQYIRATLPYI+ EIPII+VFRALGFVADKDILEHICYDF+DTQMME
Sbjct: 244 RMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMME 303
Query: 2961 LLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGEYCET 2782
LLRPSLEEAFVIQNQQVALDYIGKRG+TVGVTR+KRIKYAKEILQKEMLPHVGVGEYCET
Sbjct: 304 LLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCET 363
Query: 2781 KKAYYFGYIVHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKAYA 2602
KKAYYFGYI+HRLLLCA+GRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+ Y
Sbjct: 364 KKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYV 423
Query: 2601 QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYSSTLS 2422
QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY+STLS
Sbjct: 424 QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLS 483
Query: 2421 HLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANP 2242
HLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA P
Sbjct: 484 HLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYP 543
Query: 2241 ILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEV 2062
ILEFLEEW TENFEEISPAVIPQATKIFVNG WVGIHR+P++LV+TLR+LRR+VDVNTEV
Sbjct: 544 ILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEV 603
Query: 2061 GVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPDDGGWHDLVAKG 1882
GV+RDIRLKELR+YTDYGRCSRPLFIVEKQRL+IKKKDI+ LQQRESPD+GGWHDLVAKG
Sbjct: 604 GVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKG 663
Query: 1881 FIEYVDXXXXXXTMISMTINDLITARLKPEEAYSETYTHCEIHPSLILGVCASIIPFPDH 1702
+IEY+D TMISMTINDL+ ARL P +AYS+TYTHCEIHPSLILGVCASIIPFPDH
Sbjct: 664 YIEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDH 723
Query: 1701 NQSPRNTYQSAMGKQAMGIYVTNFQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI 1522
NQSPRNTYQSAMGKQAMGIYVTN+Q RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI
Sbjct: 724 NQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI 783
Query: 1521 NAIVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNREN 1342
NAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRP+R
Sbjct: 784 NAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRAT 843
Query: 1341 TMGMRHGSYDKLDDDGLAPPGTRVSG 1264
TMGMRHGSYDKLDDDGLAPPGTRVSG
Sbjct: 844 TMGMRHGSYDKLDDDGLAPPGTRVSG 869
Score = 561 bits (1445), Expect = e-156
Identities = 271/278 (97%), Positives = 277/278 (99%)
Frame = -1
Query: 1249 TSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 1070
TSLRHSE+GMVDQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 899 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 958
Query: 1069 MPWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 890
MPWT+EGI+PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 959 MPWTVEGISPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1018
Query: 889 LHKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 710
LHKCGYQMRGFETMYNGHTGR+LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1019 LHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1078
Query: 709 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQICGLIAIANLKKNS 530
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC+ CGLIAIANLKKNS
Sbjct: 1079 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS 1138
Query: 529 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 416
FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML
Sbjct: 1139 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1176
>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
Full=DNA-directed RNA polymerase II subunit RPB2;
Short=RNA polymerase II subunit 2; Short=RNA polymerase
II subunit B2; AltName: Full=DNA-directed RNA polymerase
II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
polymerase II subunit 2 [Solanum lycopersicum]
Length = 1191
Score = 1603 bits (4152), Expect = 0.0
Identities = 791/866 (91%), Positives = 830/866 (95%), Gaps = 2/866 (0%)
Frame = -2
Query: 3855 DEYDPTAN--DEDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESDDI 3682
DEY+P N D++EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES DI
Sbjct: 5 DEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 64
Query: 3681 IIRPESQHNPGRQSDFLETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 3502
IRPESQHNPG QSDF ETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 65 EIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 124
Query: 3501 LYVDVTKQVMKKGHDGEEVTENPETIPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP 3322
LYVDVTK+V+KKGHDGEEVTE + KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP
Sbjct: 125 LYVDVTKRVIKKGHDGEEVTETQD-FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP 183
Query: 3321 YDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSSMFV 3142
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMA+ QNRPPS+MFV
Sbjct: 184 LDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMADTQNRPPSTMFV 243
Query: 3141 RMLSRTSAKGGSSGQYIRATLPYIKQEIPIIVVFRALGFVADKDILEHICYDFSDTQMME 2962
RMLSRTSAKGGSSGQYIRATLPYI+ EIPII+VFRALGFVADKDILEHICYDF+DTQMME
Sbjct: 244 RMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMME 303
Query: 2961 LLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGEYCET 2782
LLRPSLEEAFVIQNQQVALDYIGKRG+TVGVTR+KRIKYAKEILQKEMLPHVGVGEYCET
Sbjct: 304 LLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCET 363
Query: 2781 KKAYYFGYIVHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKAYA 2602
KKAYYFGYI+HRLLLCA+GRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+ Y
Sbjct: 364 KKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYV 423
Query: 2601 QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYSSTLS 2422
QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY+STLS
Sbjct: 424 QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLS 483
Query: 2421 HLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANP 2242
HLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA P
Sbjct: 484 HLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYP 543
Query: 2241 ILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEV 2062
ILEFLEEW TENFEEISPAVIPQATKIFVNG WVGIHR+P++LV+TLR+LRR+VDVNTEV
Sbjct: 544 ILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEV 603
Query: 2061 GVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPDDGGWHDLVAKG 1882
GV+RDIRLKELR+YTDYGRCSRPLFIVEKQRL+IKKKDI+ LQQRESPD+GGWHDLVAKG
Sbjct: 604 GVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKG 663
Query: 1881 FIEYVDXXXXXXTMISMTINDLITARLKPEEAYSETYTHCEIHPSLILGVCASIIPFPDH 1702
+IEY+D TMISMTINDL+ ARL P +AYS+TYTHCEIHPSLILGVCASIIPFPDH
Sbjct: 664 YIEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDH 723
Query: 1701 NQSPRNTYQSAMGKQAMGIYVTNFQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI 1522
NQSPRNTYQSAMGKQAMGIYVTN+Q RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI
Sbjct: 724 NQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI 783
Query: 1521 NAIVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNREN 1342
NAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRP+R +
Sbjct: 784 NAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRAS 843
Query: 1341 TMGMRHGSYDKLDDDGLAPPGTRVSG 1264
TMGMRHGSYDKLDDDGLAPPGTRVSG
Sbjct: 844 TMGMRHGSYDKLDDDGLAPPGTRVSG 869
Score = 562 bits (1449), Expect = e-157
Identities = 272/278 (97%), Positives = 277/278 (99%)
Frame = -1
Query: 1249 TSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 1070
TSLRHSE+GMVDQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 899 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 958
Query: 1069 MPWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 890
MPWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 959 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1018
Query: 889 LHKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 710
LHKCGYQMRGFETMYNGHTGR+LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1019 LHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1078
Query: 709 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQICGLIAIANLKKNS 530
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC+ CGLIAIANLKKNS
Sbjct: 1079 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS 1138
Query: 529 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 416
FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML
Sbjct: 1139 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1176
>ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cicer
arietinum]
Length = 1194
Score = 1603 bits (4150), Expect = 0.0
Identities = 789/866 (91%), Positives = 831/866 (95%), Gaps = 3/866 (0%)
Frame = -2
Query: 3852 EYDPTANDED---EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESDDI 3682
EYD DE+ EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES DI
Sbjct: 8 EYDQQMMDEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 67
Query: 3681 IIRPESQHNPGRQSDFLETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 3502
IRPESQHNPG QSDF ETIYKI FGQIYLSKPMMTESDGET+TLFPKAARLRNLTYSAP
Sbjct: 68 EIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETSTLFPKAARLRNLTYSAP 127
Query: 3501 LYVDVTKQVMKKGHDGEEVTENPETIPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP 3322
LYVDV+K+V+KKGHDGEEVTE + KVFIGKVPIMLRSSYCTL+QNSEKDLTELGECP
Sbjct: 128 LYVDVSKRVIKKGHDGEEVTETQD-FTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECP 186
Query: 3321 YDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSSMFV 3142
YDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS+MFV
Sbjct: 187 YDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFV 246
Query: 3141 RMLSRTSAKGGSSGQYIRATLPYIKQEIPIIVVFRALGFVADKDILEHICYDFSDTQMME 2962
RMLSRTS+KGGSSGQYIRATLPYI+ EIPII+VFRALGFVADKDILEHICYDFSDTQMME
Sbjct: 247 RMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMME 306
Query: 2961 LLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGEYCET 2782
LLRPSLEEAFVIQNQQVALDYIGKRG+TVGVT++KRIKYAK+ILQ+EMLPHVGVGEYCET
Sbjct: 307 LLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKDILQREMLPHVGVGEYCET 366
Query: 2781 KKAYYFGYIVHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKAYA 2602
KKAYYFGYI+HRLLLCA+GRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+ Y
Sbjct: 367 KKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYV 426
Query: 2601 QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYSSTLS 2422
QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY+STLS
Sbjct: 427 QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLS 486
Query: 2421 HLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANP 2242
HLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA P
Sbjct: 487 HLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYP 546
Query: 2241 ILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEV 2062
ILEFLEEW TENFEEISPAVIPQATKIFVNGCW+GIHR+P++LV+TLR+LRR+VDVNTEV
Sbjct: 547 ILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEV 606
Query: 2061 GVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPDDGGWHDLVAKG 1882
GV+RDIRLKELR+YTDYGRCSRPLFIV+KQRLLIKKKDI +LQQRESP++GGWHDLV+KG
Sbjct: 607 GVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHSLQQRESPEEGGWHDLVSKG 666
Query: 1881 FIEYVDXXXXXXTMISMTINDLITARLKPEEAYSETYTHCEIHPSLILGVCASIIPFPDH 1702
FIEY+D TMISMTINDL+ ARL PEEAYS+TYTHCEIHPSLILGVCASIIPFPDH
Sbjct: 667 FIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDH 726
Query: 1701 NQSPRNTYQSAMGKQAMGIYVTNFQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI 1522
NQSPRNTYQSAMGKQAMGIYVTN+Q RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI
Sbjct: 727 NQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI 786
Query: 1521 NAIVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNREN 1342
NAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRP+R N
Sbjct: 787 NAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRAN 846
Query: 1341 TMGMRHGSYDKLDDDGLAPPGTRVSG 1264
TMGMRHGSYDKLDDDGLAPPGTRVSG
Sbjct: 847 TMGMRHGSYDKLDDDGLAPPGTRVSG 872
Score = 556 bits (1434), Expect = e-155
Identities = 269/277 (97%), Positives = 276/277 (99%)
Frame = -1
Query: 1246 SLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 1067
SLRHSE+G+VDQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
Sbjct: 903 SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 962
Query: 1066 PWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 887
PWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL
Sbjct: 963 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 1022
Query: 886 HKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 707
HKCGYQMRGFETMYNGHTGR+LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
Sbjct: 1023 HKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 1082
Query: 706 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQICGLIAIANLKKNSF 527
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC+ CGLIAIANLKKNSF
Sbjct: 1083 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKNSF 1142
Query: 526 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 416
ECRGCKNKTDIVQV+IPYACKLLFQELMAMAIAPRML
Sbjct: 1143 ECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRML 1179
>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
max]
Length = 1192
Score = 1602 bits (4149), Expect = 0.0
Identities = 788/864 (91%), Positives = 828/864 (95%)
Frame = -2
Query: 3855 DEYDPTANDEDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESDDIII 3676
DE D++EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES DI I
Sbjct: 10 DEQMMEEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI 69
Query: 3675 RPESQHNPGRQSDFLETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 3496
RPESQHNPG QSDF ETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY
Sbjct: 70 RPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 129
Query: 3495 VDVTKQVMKKGHDGEEVTENPETIPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD 3316
VDV+K+V+KKGHDGEEVTE + KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD
Sbjct: 130 VDVSKRVIKKGHDGEEVTE-AQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD 188
Query: 3315 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSSMFVRM 3136
QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS+MFVRM
Sbjct: 189 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRM 248
Query: 3135 LSRTSAKGGSSGQYIRATLPYIKQEIPIIVVFRALGFVADKDILEHICYDFSDTQMMELL 2956
LSRTS+KGGSSGQYIRATLPYI+ EIPII+VFRALGFVADKDILEHICYDFS TQMMELL
Sbjct: 249 LSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSYTQMMELL 308
Query: 2955 RPSLEEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGEYCETKK 2776
RPSLEEAFVIQNQQVALDYIGKRG+TVGVT++KRIKYAKEILQKEMLPHVGVGEYCETKK
Sbjct: 309 RPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKK 368
Query: 2775 AYYFGYIVHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKAYAQK 2596
AYYFGYI+HRLLLCA+GRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+ Y QK
Sbjct: 369 AYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQK 428
Query: 2595 CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYSSTLSHL 2416
CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY+STLSHL
Sbjct: 429 CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHL 488
Query: 2415 RRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPIL 2236
RRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PIL
Sbjct: 489 RRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPIL 548
Query: 2235 EFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGV 2056
EFLEEW TENFEEISPAVIPQATKIFVNGCW+GIHR+P++LV+TL++LRR+VDVNTEVGV
Sbjct: 549 EFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLKKLRRRVDVNTEVGV 608
Query: 2055 IRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPDDGGWHDLVAKGFI 1876
+RDIRLKELR+YTDYGRCSRPLFIV+KQRLLIKKKDI ALQQRESP+DGGWHDLV+KGFI
Sbjct: 609 VRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGFI 668
Query: 1875 EYVDXXXXXXTMISMTINDLITARLKPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ 1696
EY+D TMISMTINDL+ AR+ PE+AYS+TYTHCEIHPSLILGVCASIIPFPDHNQ
Sbjct: 669 EYIDTEEEETTMISMTINDLVQARINPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQ 728
Query: 1695 SPRNTYQSAMGKQAMGIYVTNFQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 1516
SPRNTYQSAMGKQAMGIYVTN+Q RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA
Sbjct: 729 SPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 788
Query: 1515 IVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTM 1336
IV+I CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRP+R NTM
Sbjct: 789 IVSIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTM 848
Query: 1335 GMRHGSYDKLDDDGLAPPGTRVSG 1264
GMRHGSYDKLDDDGLAPPGTRVSG
Sbjct: 849 GMRHGSYDKLDDDGLAPPGTRVSG 872
Score = 556 bits (1434), Expect = e-155
Identities = 269/277 (97%), Positives = 276/277 (99%)
Frame = -1
Query: 1246 SLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 1067
SLRHSE+G+VDQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
Sbjct: 903 SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 962
Query: 1066 PWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 887
PWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL
Sbjct: 963 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 1022
Query: 886 HKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 707
HKCGYQMRGFETMYNGHTGR+LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
Sbjct: 1023 HKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 1082
Query: 706 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQICGLIAIANLKKNSF 527
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC+ CGLIAIANLKKNSF
Sbjct: 1083 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF 1142
Query: 526 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 416
ECRGCKNKTDIVQV+IPYACKLLFQELMAMAIAPRML
Sbjct: 1143 ECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRML 1179
>ref|XP_007138707.1| hypothetical protein PHAVU_009G230400g [Phaseolus vulgaris]
gi|561011794|gb|ESW10701.1| hypothetical protein
PHAVU_009G230400g [Phaseolus vulgaris]
Length = 1196
Score = 1602 bits (4147), Expect = 0.0
Identities = 786/867 (90%), Positives = 832/867 (95%), Gaps = 3/867 (0%)
Frame = -2
Query: 3855 DEYDPTA---NDEDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESDD 3685
DEY+ +E++EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES D
Sbjct: 5 DEYEEQMMEDEEEEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAD 64
Query: 3684 IIIRPESQHNPGRQSDFLETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSA 3505
I IRPESQHNPG QSD ET+YKI FGQIYLSKPMMTESDGETA+LFPKAARLRNLTYSA
Sbjct: 65 IEIRPESQHNPGHQSDSAETVYKISFGQIYLSKPMMTESDGETASLFPKAARLRNLTYSA 124
Query: 3504 PLYVDVTKQVMKKGHDGEEVTENPETIPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGEC 3325
PLYVDV+K+V+KKGHDGEEVTE + KVFIGKVPIMLRSSYCTLYQNSEKDLTELGEC
Sbjct: 125 PLYVDVSKRVIKKGHDGEEVTETQD-FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGEC 183
Query: 3324 PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSSMF 3145
PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS+MF
Sbjct: 184 PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMF 243
Query: 3144 VRMLSRTSAKGGSSGQYIRATLPYIKQEIPIIVVFRALGFVADKDILEHICYDFSDTQMM 2965
VRMLSRTS+KGGSSGQYIRATLPYI+ EIPII+VFRALGFVADKDILEHICYDFSDTQMM
Sbjct: 244 VRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMM 303
Query: 2964 ELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGEYCE 2785
+LLRPSLEEAFVIQNQQVALDYIGKRGSTVGVT++KRIKYAKEILQKEMLPHVG+GEYCE
Sbjct: 304 DLLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGIGEYCE 363
Query: 2784 TKKAYYFGYIVHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKAY 2605
TKKAYYFGYI+HRLLLCA+GRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+AY
Sbjct: 364 TKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAY 423
Query: 2604 AQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYSSTL 2425
QKCVDNGKDVNLQFAIKAKT+TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY+STL
Sbjct: 424 VQKCVDNGKDVNLQFAIKAKTVTSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTL 483
Query: 2424 SHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAN 2245
SHLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA
Sbjct: 484 SHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAY 543
Query: 2244 PILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTE 2065
PILEFLEEW TENFEEISPAVIPQATKIFVNGCW+GIHR+P++LV+TLR+LRR+VDVNTE
Sbjct: 544 PILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTE 603
Query: 2064 VGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPDDGGWHDLVAK 1885
VGV+RDIRLKELR+YTDYGRCSRPLFIV++QRLLIKKKDI ALQQRESP++GGWHDLV+K
Sbjct: 604 VGVVRDIRLKELRIYTDYGRCSRPLFIVDRQRLLIKKKDIHALQQRESPEEGGWHDLVSK 663
Query: 1884 GFIEYVDXXXXXXTMISMTINDLITARLKPEEAYSETYTHCEIHPSLILGVCASIIPFPD 1705
GFIEY+D TMISMTINDL+ AR+ PEEAYS+TYTHCEIHPSLILGVCASIIPFPD
Sbjct: 664 GFIEYIDTEEEETTMISMTINDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPD 723
Query: 1704 HNQSPRNTYQSAMGKQAMGIYVTNFQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 1525
HNQSPRNTYQSAMGKQAMGIYVTN+Q RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG
Sbjct: 724 HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 783
Query: 1524 INAIVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRE 1345
INAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRP+R
Sbjct: 784 INAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA 843
Query: 1344 NTMGMRHGSYDKLDDDGLAPPGTRVSG 1264
NTMGMRHGSYDKLDDDGLAPPGTRVSG
Sbjct: 844 NTMGMRHGSYDKLDDDGLAPPGTRVSG 870
Score = 553 bits (1426), Expect = e-154
Identities = 268/277 (96%), Positives = 275/277 (99%)
Frame = -1
Query: 1246 SLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 1067
SLRHSE+G+VDQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
Sbjct: 901 SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 960
Query: 1066 PWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 887
PWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVD+ISKAL
Sbjct: 961 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDSISKAL 1020
Query: 886 HKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 707
HKCGYQMRGFETMYNGHTGR+LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
Sbjct: 1021 HKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 1080
Query: 706 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQICGLIAIANLKKNSF 527
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC+ CGLIAIANLKKNSF
Sbjct: 1081 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSF 1140
Query: 526 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 416
ECRGCKNKTDIVQV IPYACKLLFQELMAMAIAPRML
Sbjct: 1141 ECRGCKNKTDIVQVFIPYACKLLFQELMAMAIAPRML 1177
>ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
max]
Length = 1193
Score = 1601 bits (4146), Expect = 0.0
Identities = 788/864 (91%), Positives = 828/864 (95%)
Frame = -2
Query: 3855 DEYDPTANDEDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESDDIII 3676
DE +D++EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES DI I
Sbjct: 10 DEQMMEEDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI 69
Query: 3675 RPESQHNPGRQSDFLETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 3496
RPESQHNPG QSDF ETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY
Sbjct: 70 RPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 129
Query: 3495 VDVTKQVMKKGHDGEEVTENPETIPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD 3316
VDV+K+V+KKGHDGEEVTE + + KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD
Sbjct: 130 VDVSKRVVKKGHDGEEVTETQD-LTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD 188
Query: 3315 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSSMFVRM 3136
QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS+MFVRM
Sbjct: 189 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRM 248
Query: 3135 LSRTSAKGGSSGQYIRATLPYIKQEIPIIVVFRALGFVADKDILEHICYDFSDTQMMELL 2956
LSRTS+KGGSSGQYIRATLPYI+ EIPII+VFRALGFVADKDILEHICYDFSDT MMELL
Sbjct: 249 LSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTLMMELL 308
Query: 2955 RPSLEEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGEYCETKK 2776
RPSLEEAFVIQNQQVALDYIGKRG+TVGVT++KRIKYAKEILQKEMLPHVGVGEYCETKK
Sbjct: 309 RPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKK 368
Query: 2775 AYYFGYIVHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKAYAQK 2596
AYYFGYI+HRLLLCA+GRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+ Y QK
Sbjct: 369 AYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQK 428
Query: 2595 CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYSSTLSHL 2416
CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY+STLSHL
Sbjct: 429 CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHL 488
Query: 2415 RRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPIL 2236
RRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PIL
Sbjct: 489 RRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPIL 548
Query: 2235 EFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGV 2056
EFLEEW TENFEEISPAVIPQATKIFVNGCW+GIHR+P++LV+TLR+LRR+VDVNTEVGV
Sbjct: 549 EFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGV 608
Query: 2055 IRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPDDGGWHDLVAKGFI 1876
+RDI LKELR+YTDYGRCSRPLFIV+KQRLLIKKKDI ALQQRESP+DGGWHDLV+KGFI
Sbjct: 609 VRDIILKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGFI 668
Query: 1875 EYVDXXXXXXTMISMTINDLITARLKPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ 1696
EY+D TMISMTINDL+ AR+ PE+AY+ TYTHCEIHPSLILGVCASIIPFPDHNQ
Sbjct: 669 EYIDTEEEETTMISMTINDLVQARINPEDAYAGTYTHCEIHPSLILGVCASIIPFPDHNQ 728
Query: 1695 SPRNTYQSAMGKQAMGIYVTNFQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 1516
SPRNTYQSAMGKQAMGIYVTN+Q RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA
Sbjct: 729 SPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 788
Query: 1515 IVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTM 1336
IVAI CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRP+R NTM
Sbjct: 789 IVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTM 848
Query: 1335 GMRHGSYDKLDDDGLAPPGTRVSG 1264
GMRHGSYDKLDDDGLAPPGTRVSG
Sbjct: 849 GMRHGSYDKLDDDGLAPPGTRVSG 872
Score = 556 bits (1434), Expect = e-155
Identities = 269/277 (97%), Positives = 276/277 (99%)
Frame = -1
Query: 1246 SLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 1067
SLRHSE+G+VDQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
Sbjct: 903 SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 962
Query: 1066 PWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 887
PWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL
Sbjct: 963 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 1022
Query: 886 HKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 707
HKCGYQMRGFETMYNGHTGR+LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
Sbjct: 1023 HKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 1082
Query: 706 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQICGLIAIANLKKNSF 527
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC+ CGLIAIANLKKNSF
Sbjct: 1083 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF 1142
Query: 526 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 416
ECRGCKNKTDIVQV+IPYACKLLFQELMAMAIAPRML
Sbjct: 1143 ECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRML 1179
>ref|XP_007214559.1| hypothetical protein PRUPE_ppa000425mg [Prunus persica]
gi|462410424|gb|EMJ15758.1| hypothetical protein
PRUPE_ppa000425mg [Prunus persica]
Length = 1192
Score = 1600 bits (4144), Expect = 0.0
Identities = 790/865 (91%), Positives = 829/865 (95%), Gaps = 2/865 (0%)
Frame = -2
Query: 3852 EYDPTA-NDEDE-EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESDDII 3679
EYD ND+DE EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES DI
Sbjct: 6 EYDDQQYNDDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIE 65
Query: 3678 IRPESQHNPGRQSDFLETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPL 3499
IRPESQHNPG Q DF ET Y+I FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPL
Sbjct: 66 IRPESQHNPGHQPDFAETTYRIKFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPL 125
Query: 3498 YVDVTKQVMKKGHDGEEVTENPETIPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 3319
YVDV+K ++KKGHDGEEVTE + KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY
Sbjct: 126 YVDVSKSIVKKGHDGEEVTETQD-FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 184
Query: 3318 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSSMFVR 3139
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS+MFVR
Sbjct: 185 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVR 244
Query: 3138 MLSRTSAKGGSSGQYIRATLPYIKQEIPIIVVFRALGFVADKDILEHICYDFSDTQMMEL 2959
ML+RTS+KGGSSGQYIRATLPYI+ EIPII+VFRALGFVADKDILEHICYDFSDTQMMEL
Sbjct: 245 MLARTSSKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL 304
Query: 2958 LRPSLEEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGEYCETK 2779
LRPSLEEAFVIQNQQVALDYIGKRG+TVGV+R+KRIKYAKEILQKEMLPHVGVGE+CETK
Sbjct: 305 LRPSLEEAFVIQNQQVALDYIGKRGATVGVSREKRIKYAKEILQKEMLPHVGVGEFCETK 364
Query: 2778 KAYYFGYIVHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKAYAQ 2599
KAYYFGYI+HRLLLCA+GRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+ Y Q
Sbjct: 365 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 424
Query: 2598 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYSSTLSH 2419
KCVDNGK++NLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY+STLSH
Sbjct: 425 KCVDNGKELNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 484
Query: 2418 LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPI 2239
LRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PI
Sbjct: 485 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI 544
Query: 2238 LEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVG 2059
LEFLEEW TENFEEISPAVIPQATKIFVNGCWVGIHR+PE+LVKTLR+LRR+VDVNTEVG
Sbjct: 545 LEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRKLRRRVDVNTEVG 604
Query: 2058 VIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPDDGGWHDLVAKGF 1879
V+RDIRLKELR+YTDYGRCSRPLFIV+KQRLLIKKKDI ALQQRE+P+DGGWHDLVAKGF
Sbjct: 605 VVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRENPEDGGWHDLVAKGF 664
Query: 1878 IEYVDXXXXXXTMISMTINDLITARLKPEEAYSETYTHCEIHPSLILGVCASIIPFPDHN 1699
IEY+D TMISMTINDL+ ARL PEEAYS+TYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 665 IEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 724
Query: 1698 QSPRNTYQSAMGKQAMGIYVTNFQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 1519
QSPRNTYQSAMGKQAMGIYVTN+Q RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 725 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 784
Query: 1518 AIVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENT 1339
AIVAI+CYSGYNQEDSVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKE+FGRP+R NT
Sbjct: 785 AIVAISCYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANT 844
Query: 1338 MGMRHGSYDKLDDDGLAPPGTRVSG 1264
MGMRHGSYDKLDDDGLAPPGTRVSG
Sbjct: 845 MGMRHGSYDKLDDDGLAPPGTRVSG 869
Score = 552 bits (1422), Expect = e-154
Identities = 265/277 (95%), Positives = 275/277 (99%)
Frame = -1
Query: 1246 SLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 1067
SLRHSE+G+VDQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
Sbjct: 901 SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 960
Query: 1066 PWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 887
PWT+EG+TPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+AL
Sbjct: 961 PWTVEGVTPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRAL 1020
Query: 886 HKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 707
H CGYQMRGFETMYNGHTGR+LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
Sbjct: 1021 HSCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 1080
Query: 706 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQICGLIAIANLKKNSF 527
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC+ CGLIAIANLKKNSF
Sbjct: 1081 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF 1140
Query: 526 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 416
ECRGCKNKTDIVQV+IPYACKLLFQELM+MAIAPRML
Sbjct: 1141 ECRGCKNKTDIVQVYIPYACKLLFQELMSMAIAPRML 1177
>ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phaseolus vulgaris]
gi|561021391|gb|ESW20162.1| hypothetical protein
PHAVU_006G185800g [Phaseolus vulgaris]
Length = 1194
Score = 1597 bits (4135), Expect = 0.0
Identities = 786/866 (90%), Positives = 829/866 (95%), Gaps = 3/866 (0%)
Frame = -2
Query: 3852 EYDPTA---NDEDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESDDI 3682
EYD D++++ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES DI
Sbjct: 8 EYDQQMMEEEDDEDDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 67
Query: 3681 IIRPESQHNPGRQSDFLETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 3502
IRPESQHNPG QSDF ETIY+I FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 68 EIRPESQHNPGHQSDFAETIYRISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 127
Query: 3501 LYVDVTKQVMKKGHDGEEVTENPETIPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP 3322
LYVDV+K+V+KKGHDGEEVTE + KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP
Sbjct: 128 LYVDVSKRVIKKGHDGEEVTETQD-FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP 186
Query: 3321 YDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSSMFV 3142
YDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS+MFV
Sbjct: 187 YDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFV 246
Query: 3141 RMLSRTSAKGGSSGQYIRATLPYIKQEIPIIVVFRALGFVADKDILEHICYDFSDTQMME 2962
RMLSRTS+KGGSSGQYIRATLPYI+ EIPII+VFRALGFVADKDILEHICYDFSDTQMME
Sbjct: 247 RMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMME 306
Query: 2961 LLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGEYCET 2782
LLRPSLEEAFVIQNQQVALDYIGKRG+TVGVT++KRIKYAKEILQKEMLPHVGVGEYCET
Sbjct: 307 LLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCET 366
Query: 2781 KKAYYFGYIVHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKAYA 2602
KKAYYFGYI+HRLLLCA+GRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+ Y
Sbjct: 367 KKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYV 426
Query: 2601 QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYSSTLS 2422
QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT++STLS
Sbjct: 427 QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLS 486
Query: 2421 HLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANP 2242
HLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA P
Sbjct: 487 HLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYP 546
Query: 2241 ILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEV 2062
ILEFLEEW TENFEEISPAVIPQATKIFVNG W+GIHR+P++LV+TLR+LRR+VDVNTEV
Sbjct: 547 ILEFLEEWGTENFEEISPAVIPQATKIFVNGSWMGIHRDPDMLVRTLRKLRRRVDVNTEV 606
Query: 2061 GVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPDDGGWHDLVAKG 1882
GV+RDIRLKELR+YTDYGRCSRPLFIV+KQRLLIKK+DI ALQQRESP++GGWHDLV+KG
Sbjct: 607 GVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKRDIHALQQRESPEEGGWHDLVSKG 666
Query: 1881 FIEYVDXXXXXXTMISMTINDLITARLKPEEAYSETYTHCEIHPSLILGVCASIIPFPDH 1702
FIEY+D TMISMTINDL+ ARL PE+AYS+TYTHCEIHPSLILGVCASIIPFPDH
Sbjct: 667 FIEYIDTEEEETTMISMTINDLVQARLNPEDAYSDTYTHCEIHPSLILGVCASIIPFPDH 726
Query: 1701 NQSPRNTYQSAMGKQAMGIYVTNFQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI 1522
NQSPRNTYQSAMGKQAMGIYVTN+Q RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI
Sbjct: 727 NQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI 786
Query: 1521 NAIVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNREN 1342
NAIVAI CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRP+R N
Sbjct: 787 NAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTN 846
Query: 1341 TMGMRHGSYDKLDDDGLAPPGTRVSG 1264
TMGMRHGSYDKLDDDGLAPPGTRVSG
Sbjct: 847 TMGMRHGSYDKLDDDGLAPPGTRVSG 872
Score = 558 bits (1438), Expect = e-156
Identities = 270/277 (97%), Positives = 276/277 (99%)
Frame = -1
Query: 1246 SLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 1067
SLRHSE+GMVDQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
Sbjct: 903 SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 962
Query: 1066 PWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 887
PWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL
Sbjct: 963 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 1022
Query: 886 HKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 707
HKCGYQMRGFETMYNGHTGR+LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
Sbjct: 1023 HKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 1082
Query: 706 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQICGLIAIANLKKNSF 527
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC+ CGLIAIANLKKNSF
Sbjct: 1083 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF 1142
Query: 526 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 416
ECRGCKNKTDIVQV+IPYACKLLFQELMAMAIAPRML
Sbjct: 1143 ECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRML 1179
>ref|XP_006650345.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Oryza
brachyantha]
Length = 1184
Score = 1596 bits (4132), Expect = 0.0
Identities = 792/864 (91%), Positives = 825/864 (95%)
Frame = -2
Query: 3855 DEYDPTANDEDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESDDIII 3676
DE + DE EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES DI I
Sbjct: 4 DEAEGDGPDE-EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI 62
Query: 3675 RPESQHNPGRQSDFLETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 3496
RPESQHNPGRQ++F ET++KI FGQIYLSKPMMTE+DGETATLFPK+ARLRNLTYSAPLY
Sbjct: 63 RPESQHNPGRQAEFAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLY 122
Query: 3495 VDVTKQVMKKGHDGEEVTENPETIPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD 3316
VDV+ +VMKKGHD EEVTE E PKVFIGKVPIMLRSSYCTL+Q SEKDLTELGECPYD
Sbjct: 123 VDVSYRVMKKGHDCEEVTETME-YPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYD 181
Query: 3315 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSSMFVRM 3136
QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRP SSMFVRM
Sbjct: 182 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRM 241
Query: 3135 LSRTSAKGGSSGQYIRATLPYIKQEIPIIVVFRALGFVADKDILEHICYDFSDTQMMELL 2956
LSR AKGGSSGQYIRATLPYI+ +IPII+VFRALGFVADKDILEHICYDFSDTQMMELL
Sbjct: 242 LSRAGAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELL 301
Query: 2955 RPSLEEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGEYCETKK 2776
RPSLEEAFVIQNQQVALDYIGKRG+TVGVTR+KRIKYAKEILQKEMLPHVGVGE+CETKK
Sbjct: 302 RPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKK 361
Query: 2775 AYYFGYIVHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKAYAQK 2596
AYYFGYI+HRLL+CA+GRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV++Y QK
Sbjct: 362 AYYFGYIIHRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQK 421
Query: 2595 CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYSSTLSHL 2416
CVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLTY+STLSHL
Sbjct: 422 CVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHL 481
Query: 2415 RRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPIL 2236
RRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPIL
Sbjct: 482 RRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPIL 541
Query: 2235 EFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGV 2056
EFLEEW TENFEEISPAVIPQA KIFVNGCWVGIHRNP+LLVKTLR+LRRQ+DVNTEVGV
Sbjct: 542 EFLEEWGTENFEEISPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGV 601
Query: 2055 IRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPDDGGWHDLVAKGFI 1876
+RDIRLKELRLYTDYGRCSRPLFIVE QRLLIKKK IRALQQRE+P++ GWHDLVAKGFI
Sbjct: 602 VRDIRLKELRLYTDYGRCSRPLFIVENQRLLIKKKHIRALQQRETPEE-GWHDLVAKGFI 660
Query: 1875 EYVDXXXXXXTMISMTINDLITARLKPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ 1696
EY+D TMISMTINDL+ AR PEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ
Sbjct: 661 EYIDTEEEETTMISMTINDLVNARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ 720
Query: 1695 SPRNTYQSAMGKQAMGIYVTNFQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 1516
SPRNTYQSAMGKQAMGIYVTN+QLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA
Sbjct: 721 SPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 780
Query: 1515 IVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTM 1336
IVAI CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTM
Sbjct: 781 IVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTM 840
Query: 1335 GMRHGSYDKLDDDGLAPPGTRVSG 1264
GMRHGSYDKLDDDGLAPPGTRVSG
Sbjct: 841 GMRHGSYDKLDDDGLAPPGTRVSG 864
Score = 563 bits (1451), Expect = e-157
Identities = 275/278 (98%), Positives = 276/278 (99%)
Frame = -1
Query: 1249 TSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 1070
TSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 894 TSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 953
Query: 1069 MPWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 890
MPWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 954 MPWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1013
Query: 889 LHKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 710
LHKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1014 LHKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1073
Query: 709 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQICGLIAIANLKKNS 530
AEGRSRDGGLRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVC+ CGLIAIANLKKNS
Sbjct: 1074 AEGRSRDGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNS 1133
Query: 529 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 416
FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML
Sbjct: 1134 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1171
>gb|ABF97884.1| DNA-directed RNA polymerase II 135 kDa polypeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|125545063|gb|EAY91202.1| hypothetical protein
OsI_12811 [Oryza sativa Indica Group]
Length = 1222
Score = 1595 bits (4131), Expect = 0.0
Identities = 792/879 (90%), Positives = 828/879 (94%), Gaps = 12/879 (1%)
Frame = -2
Query: 3864 YGGDEYDPTANDE------------DEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQ 3721
YG +EY +E +EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQ
Sbjct: 26 YGAEEYGAVGGEEMEDEEADGDAPDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQ 85
Query: 3720 NTMQEIVDESDDIIIRPESQHNPGRQSDFLETIYKIGFGQIYLSKPMMTESDGETATLFP 3541
NTMQEIVDES DI IRPESQHNPGRQ++F ET++KI FGQIYLSKPMMTE+DGETATLFP
Sbjct: 86 NTMQEIVDESADIEIRPESQHNPGRQAEFAETLHKISFGQIYLSKPMMTEADGETATLFP 145
Query: 3540 KAARLRNLTYSAPLYVDVTKQVMKKGHDGEEVTENPETIPKVFIGKVPIMLRSSYCTLYQ 3361
K+ARLRNLTYSAPLYVDV+ +VMKKGHD EEVTE E PKVFIGKVPIMLRSSYCTL+Q
Sbjct: 146 KSARLRNLTYSAPLYVDVSYRVMKKGHDCEEVTETME-YPKVFIGKVPIMLRSSYCTLFQ 204
Query: 3360 NSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSM 3181
SEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSM
Sbjct: 205 QSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSM 264
Query: 3180 AENQNRPPSSMFVRMLSRTSAKGGSSGQYIRATLPYIKQEIPIIVVFRALGFVADKDILE 3001
AENQNRP SSMFVRMLSR AKGGSSGQYIRATLPYI+ +IPII+VFRALGFVADKDILE
Sbjct: 265 AENQNRPASSMFVRMLSRAGAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILE 324
Query: 3000 HICYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKE 2821
HICYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVT++KRIKYAKEILQKE
Sbjct: 325 HICYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKE 384
Query: 2820 MLPHVGVGEYCETKKAYYFGYIVHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRM 2641
MLPHVGVGE+CETKKAYYFGYI+HRLL+CA+GRR EDDRDHYGNKRLDLAGPLLGGLFRM
Sbjct: 385 MLPHVGVGEFCETKKAYYFGYIIHRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRM 444
Query: 2640 LFRKLTRDVKAYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVS 2461
LFRKLTRDV++Y QKCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQAN AGTRAGVS
Sbjct: 445 LFRKLTRDVRSYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVS 504
Query: 2460 QVLNRLTYSSTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLA 2281
QVLNRLTY+STLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLA
Sbjct: 505 QVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLA 564
Query: 2280 LMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTL 2101
LMVYITVGSAANPILEFLEEW TENFEEISPAVIPQA KIFVNGCWVGIHRNP+LLVKTL
Sbjct: 565 LMVYITVGSAANPILEFLEEWGTENFEEISPAVIPQAAKIFVNGCWVGIHRNPDLLVKTL 624
Query: 2100 RQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRES 1921
R+LRRQ+DVNTEVGV+RDIRLKELRLYTDYGRCSRPLFIVE QRLLIKK+ IRALQQRE+
Sbjct: 625 RRLRRQIDVNTEVGVVRDIRLKELRLYTDYGRCSRPLFIVENQRLLIKKRHIRALQQRET 684
Query: 1920 PDDGGWHDLVAKGFIEYVDXXXXXXTMISMTINDLITARLKPEEAYSETYTHCEIHPSLI 1741
P++ GWHDLVAKGFIEY+D TMISMTINDLI AR PEEAYSETYTHCEIHPSLI
Sbjct: 685 PEE-GWHDLVAKGFIEYIDTEEEETTMISMTINDLIGARHNPEEAYSETYTHCEIHPSLI 743
Query: 1740 LGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQLRMDTLAYVLYYPQKPLVTTRA 1561
LGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTN+QLRMDTLAYVLYYPQKPLVTTRA
Sbjct: 744 LGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRA 803
Query: 1560 MEHLHFRQLPAGINAIVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGT 1381
MEHLHFRQLPAGINAIVAI CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGT
Sbjct: 804 MEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGT 863
Query: 1380 LVKEEFGRPNRENTMGMRHGSYDKLDDDGLAPPGTRVSG 1264
LVKEEFGRPNRENTMGMRHGSYDKLDDDGLAPPGTRVSG
Sbjct: 864 LVKEEFGRPNRENTMGMRHGSYDKLDDDGLAPPGTRVSG 902
Score = 562 bits (1448), Expect = e-157
Identities = 274/278 (98%), Positives = 276/278 (99%)
Frame = -1
Query: 1249 TSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 1070
TSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 932 TSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 991
Query: 1069 MPWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 890
MPWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 992 MPWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1051
Query: 889 LHKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 710
LHKCGYQMRGFETMYNGHTGRKL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1052 LHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1111
Query: 709 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQICGLIAIANLKKNS 530
AEGRSRDGGLRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVC+ CGLIAIANLKKNS
Sbjct: 1112 AEGRSRDGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNS 1171
Query: 529 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 416
FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML
Sbjct: 1172 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1209