BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00002349
         (889 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006485880.1| PREDICTED: RNA pseudouridine synthase 5-like...   374   e-101
ref|XP_006436267.1| hypothetical protein CICLE_v10033672mg [Citr...   374   e-101
ref|XP_006485879.1| PREDICTED: RNA pseudouridine synthase 5-like...   370   e-100
ref|XP_002312025.1| hypothetical protein POPTR_0008s04160g [Popu...   365   1e-98
ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like...   365   1e-98
ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like...   365   1e-98
ref|XP_007009784.1| Pseudouridine synthase family protein [Theob...   364   2e-98
ref|XP_004233537.1| PREDICTED: RNA pseudourine synthase 5-like [...   364   2e-98
gb|EXB80105.1| RNA pseudourine synthase 5 [Morus notabilis]           363   4e-98
ref|XP_006346978.1| PREDICTED: RNA pseudouridine synthase 5-like...   363   4e-98
ref|XP_004307403.1| PREDICTED: RNA pseudourine synthase 5-like [...   363   4e-98
ref|XP_004496322.1| PREDICTED: RNA pseudourine synthase 5-like [...   363   5e-98
ref|XP_007143685.1| hypothetical protein PHAVU_007G093000g [Phas...   358   1e-96
ref|XP_002276664.1| PREDICTED: RNA pseudourine synthase 5-like [...   357   3e-96
emb|CBI31488.3| unnamed protein product [Vitis vinifera]              356   8e-96
ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatul...   354   2e-95
gb|EYU39826.1| hypothetical protein MIMGU_mgv1a008941mg [Mimulus...   353   6e-95
ref|XP_003556222.1| PREDICTED: RNA pseudouridine synthase 5-like...   351   2e-94
ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [...   346   6e-93
ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [...   345   1e-92

>ref|XP_006485880.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X2 [Citrus
           sinensis] gi|568865018|ref|XP_006485881.1| PREDICTED:
           RNA pseudouridine synthase 5-like isoform X3 [Citrus
           sinensis]
          Length = 389

 Score =  374 bits (961), Expect = e-101
 Identities = 192/293 (65%), Positives = 218/293 (74%)
 Frame = +3

Query: 9   GSELVYHRLPWKEPDAPFXXXXXXXXXXXXXXNKPSGLQVLPGGLFQQRTVLSQLQWRAQ 188
           GSELVYHRLPWKEPD P+              NKPSGLQVLPGGLFQQRTVL QLQWRA 
Sbjct: 82  GSELVYHRLPWKEPDVPYLLEVFYEDDDLIALNKPSGLQVLPGGLFQQRTVLKQLQWRAS 141

Query: 189 KMQLGSSGTLEAQVPHLVPVHRLGRGTSGIXXXXXXXXXXXXXXXYFADGTSVVANQRCA 368
           K     S +L +Q  H VPVHRLGRGTSGI               YFAD TSVV     A
Sbjct: 142 KQ----SSSLSSQASHPVPVHRLGRGTSGILLCAKTKLAKTCIAAYFADKTSVVD----A 193

Query: 369 ENTKDHFSVRKILKVYRALVSGIIDKDEVVIEQPIGMIRYPGVAKGLYAASLSGKPALSK 548
           +NT    S RKI K+YRALV GI+D+D+V+I+QPIG++RYPGVAKGLY AS SGKPALSK
Sbjct: 194 DNTVMELSQRKITKIYRALVHGIVDEDKVIIKQPIGIVRYPGVAKGLYVASPSGKPALSK 253

Query: 549 VNVLERHFQGNNTLVQVEIQSGRPHQIRIHLSFIGNPLLGDPLYVAGGHPICFDSESRDE 728
           V+VLER  Q N TLVQVEIQSGRPHQIRIHL+F+G+PLLGDPLYVAGG P  FDSE  D 
Sbjct: 254 VDVLERDVQRNCTLVQVEIQSGRPHQIRIHLAFLGHPLLGDPLYVAGGQPKSFDSEFADG 313

Query: 729 GYTEDGGYPRPTKPVPGDCGYCLHAHRVALRHPTTNEVMEITAPLPSILQTKE 887
            + +DGGY RP  PVPGDCGY LHA+++ L HPTTNEV++ITAPLPS+L+T+E
Sbjct: 314 TFAQDGGYERPVNPVPGDCGYYLHAYQLFLSHPTTNEVIKITAPLPSVLKTRE 366


>ref|XP_006436267.1| hypothetical protein CICLE_v10033672mg [Citrus clementina]
           gi|557538463|gb|ESR49507.1| hypothetical protein
           CICLE_v10033672mg [Citrus clementina]
          Length = 312

 Score =  374 bits (961), Expect = e-101
 Identities = 192/293 (65%), Positives = 218/293 (74%)
 Frame = +3

Query: 9   GSELVYHRLPWKEPDAPFXXXXXXXXXXXXXXNKPSGLQVLPGGLFQQRTVLSQLQWRAQ 188
           GSELVYHRLPWKEPD P+              NKPSGLQVLPGGLFQQRTVL QLQWRA 
Sbjct: 5   GSELVYHRLPWKEPDVPYLLEVFYEDDDLIALNKPSGLQVLPGGLFQQRTVLKQLQWRAS 64

Query: 189 KMQLGSSGTLEAQVPHLVPVHRLGRGTSGIXXXXXXXXXXXXXXXYFADGTSVVANQRCA 368
           K     S +L +Q  H VPVHRLGRGTSGI               YFAD TSVV     A
Sbjct: 65  KQ----SSSLSSQASHPVPVHRLGRGTSGILLCAKTKLAKTCIAAYFADKTSVVD----A 116

Query: 369 ENTKDHFSVRKILKVYRALVSGIIDKDEVVIEQPIGMIRYPGVAKGLYAASLSGKPALSK 548
           +NT    S RKI K+YRALV GI+D+D+V+I+QPIG++RYPGVAKGLY AS SGKPALSK
Sbjct: 117 DNTVMELSQRKITKIYRALVHGIVDEDKVIIKQPIGIVRYPGVAKGLYVASPSGKPALSK 176

Query: 549 VNVLERHFQGNNTLVQVEIQSGRPHQIRIHLSFIGNPLLGDPLYVAGGHPICFDSESRDE 728
           V+VLER  Q N TLVQVEIQSGRPHQIRIHL+F+G+PLLGDPLYVAGG P  FDSE  D 
Sbjct: 177 VDVLERDVQRNCTLVQVEIQSGRPHQIRIHLAFLGHPLLGDPLYVAGGQPKSFDSEFADG 236

Query: 729 GYTEDGGYPRPTKPVPGDCGYCLHAHRVALRHPTTNEVMEITAPLPSILQTKE 887
            + +DGGY RP  PVPGDCGY LHA+++ L HPTTNEV++ITAPLPS+L+T+E
Sbjct: 237 TFAQDGGYERPVNPVPGDCGYYLHAYQLFLSHPTTNEVIKITAPLPSVLKTRE 289


>ref|XP_006485879.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X1 [Citrus
           sinensis]
          Length = 390

 Score =  370 bits (949), Expect = e-100
 Identities = 192/294 (65%), Positives = 218/294 (74%), Gaps = 1/294 (0%)
 Frame = +3

Query: 9   GSELVYHRLPWKEPDAPFXXXXXXXXXXXXXXNKPSGLQVLPGGLFQQRTVLSQLQWRAQ 188
           GSELVYHRLPWKEPD P+              NKPSGLQVLPGGLFQQRTVL QLQWRA 
Sbjct: 82  GSELVYHRLPWKEPDVPYLLEVFYEDDDLIALNKPSGLQVLPGGLFQQRTVLKQLQWRAS 141

Query: 189 KMQLGSSGTLEAQVPHLVPVHRLGRGTSGIXXXXXXXXXXXXXXXYFADGTSVVANQRCA 368
           K     S +L +Q  H VPVHRLGRGTSGI               YFAD TSVV     A
Sbjct: 142 KQ----SSSLSSQASHPVPVHRLGRGTSGILLCAKTKLAKTCIAAYFADKTSVVD----A 193

Query: 369 ENTKDHFSVRKILKVYRALVSGIIDKDEVVIEQPIGMIRYPGVAKGLYAASLSGKPALSK 548
           +NT    S RKI K+YRALV GI+D+D+V+I+QPIG++RYPGVAKGLY AS SGKPALSK
Sbjct: 194 DNTVMELSQRKITKIYRALVHGIVDEDKVIIKQPIGIVRYPGVAKGLYVASPSGKPALSK 253

Query: 549 VNVLERHFQGNNTLVQ-VEIQSGRPHQIRIHLSFIGNPLLGDPLYVAGGHPICFDSESRD 725
           V+VLER  Q N TLVQ VEIQSGRPHQIRIHL+F+G+PLLGDPLYVAGG P  FDSE  D
Sbjct: 254 VDVLERDVQRNCTLVQQVEIQSGRPHQIRIHLAFLGHPLLGDPLYVAGGQPKSFDSEFAD 313

Query: 726 EGYTEDGGYPRPTKPVPGDCGYCLHAHRVALRHPTTNEVMEITAPLPSILQTKE 887
             + +DGGY RP  PVPGDCGY LHA+++ L HPTTNEV++ITAPLPS+L+T+E
Sbjct: 314 GTFAQDGGYERPVNPVPGDCGYYLHAYQLFLSHPTTNEVIKITAPLPSVLKTRE 367


>ref|XP_002312025.1| hypothetical protein POPTR_0008s04160g [Populus trichocarpa]
           gi|222851845|gb|EEE89392.1| hypothetical protein
           POPTR_0008s04160g [Populus trichocarpa]
          Length = 377

 Score =  365 bits (938), Expect = 1e-98
 Identities = 188/295 (63%), Positives = 215/295 (72%), Gaps = 1/295 (0%)
 Frame = +3

Query: 3   RPGSELVYHRLPWKEPDAPFXXXXXXXXXXXXXXNKPSGLQVLPGGLFQQRTVLSQLQWR 182
           R G ELVYHRLPW+EPDAP+              NKP GLQVLPGGLFQQRTVL QLQWR
Sbjct: 82  RDGMELVYHRLPWREPDAPYLLQVLYEDDDMVALNKPPGLQVLPGGLFQQRTVLMQLQWR 141

Query: 183 AQKMQLGSSGTLEAQVPHLVPVHRLGRGTSGIXXXXXXXXXXXXXXXYFADGTSVVANQR 362
           A K     S +L  Q  H VPVHRLGRGTSGI               YFADGTS++ +  
Sbjct: 142 ASK----GSSSLAIQGSHPVPVHRLGRGTSGILLCAKTKVAKTSLAAYFADGTSLIGDSS 197

Query: 363 CAENTKDHFSVRKILKVYRALVSGIIDKDEVVIEQPIGMIRYPGVAKGLYAASLSGKPAL 542
            A    +    RKI K+YRALV+GI+++D+++I+QPIG +RYPGVAKGLY AS SGKPAL
Sbjct: 198 NAN--MEQSKRRKISKIYRALVNGILNQDKIIIKQPIGTMRYPGVAKGLYVASPSGKPAL 255

Query: 543 SKVNVLERHFQGNNTLVQVEIQSGRPHQIRIHLSFIGNPLLGDPLYVAGGHPICFDSESR 722
           SKV VLER  Q N TLVQVEI+SGRPHQIRIHLSFIG+PLLGDPLY  GG P+CFDSE  
Sbjct: 256 SKVEVLERDSQLNQTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLYDVGGQPMCFDSEHE 315

Query: 723 DEGYTEDGGYPRPTKPVPGDCGYCLHAHRVALRHPTTNE-VMEITAPLPSILQTK 884
           DE + EDGGY RP KPVPGDCGY LHAH++ L HPT NE V++ITAPLPSIL+T+
Sbjct: 316 DESFAEDGGYERPAKPVPGDCGYYLHAHQLVLSHPTKNEQVIKITAPLPSILRTQ 370


>ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X3 [Solanum
           tuberosum]
          Length = 374

 Score =  365 bits (937), Expect = 1e-98
 Identities = 188/295 (63%), Positives = 217/295 (73%)
 Frame = +3

Query: 3   RPGSELVYHRLPWKEPDAPFXXXXXXXXXXXXXXNKPSGLQVLPGGLFQQRTVLSQLQWR 182
           R G+ELVYHRLPW+EPDAP+              NKPSGLQVLPGGL+QQRTVL+QLQW 
Sbjct: 81  RAGAELVYHRLPWREPDAPYLLEVLFQDDYLIVVNKPSGLQVLPGGLYQQRTVLTQLQWH 140

Query: 183 AQKMQLGSSGTLEAQVPHLVPVHRLGRGTSGIXXXXXXXXXXXXXXXYFADGTSVVANQR 362
           A K    SSG    Q  H VPVHRLGRGTSGI               YFA+GTSVV + +
Sbjct: 141 ACKPTTTSSG---CQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVVED-K 196

Query: 363 CAENTKDHFSVRKILKVYRALVSGIIDKDEVVIEQPIGMIRYPGVAKGLYAASLSGKPAL 542
           C  +  +  ++RKI K+YRALVSG++D DEVVI+QPIG I+YPGVAKGLY AS SGKPAL
Sbjct: 197 CTNSECN--TMRKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAKGLYVASPSGKPAL 254

Query: 543 SKVNVLERHFQGNNTLVQVEIQSGRPHQIRIHLSFIGNPLLGDPLYVAGGHPICFDSESR 722
           S V VLER  + N TLVQVEIQSGRPHQIRIHLSFIG PL+GDPLYV+GG P CF  E  
Sbjct: 255 SSVRVLERDSENNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPELM 314

Query: 723 DEGYTEDGGYPRPTKPVPGDCGYCLHAHRVALRHPTTNEVMEITAPLPSILQTKE 887
           DE + +DGGY RP  PVPGDCGY LHAH++ L HP TNE+++ITAPLP+ILQT+E
Sbjct: 315 DESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTRE 369


>ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X1 [Solanum
           tuberosum] gi|565360441|ref|XP_006346976.1| PREDICTED:
           RNA pseudouridine synthase 5-like isoform X2 [Solanum
           tuberosum]
          Length = 379

 Score =  365 bits (937), Expect = 1e-98
 Identities = 188/295 (63%), Positives = 217/295 (73%)
 Frame = +3

Query: 3   RPGSELVYHRLPWKEPDAPFXXXXXXXXXXXXXXNKPSGLQVLPGGLFQQRTVLSQLQWR 182
           R G+ELVYHRLPW+EPDAP+              NKPSGLQVLPGGL+QQRTVL+QLQW 
Sbjct: 86  RAGAELVYHRLPWREPDAPYLLEVLFQDDYLIVVNKPSGLQVLPGGLYQQRTVLTQLQWH 145

Query: 183 AQKMQLGSSGTLEAQVPHLVPVHRLGRGTSGIXXXXXXXXXXXXXXXYFADGTSVVANQR 362
           A K    SSG    Q  H VPVHRLGRGTSGI               YFA+GTSVV + +
Sbjct: 146 ACKPTTTSSG---CQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVVED-K 201

Query: 363 CAENTKDHFSVRKILKVYRALVSGIIDKDEVVIEQPIGMIRYPGVAKGLYAASLSGKPAL 542
           C  +  +  ++RKI K+YRALVSG++D DEVVI+QPIG I+YPGVAKGLY AS SGKPAL
Sbjct: 202 CTNSECN--TMRKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAKGLYVASPSGKPAL 259

Query: 543 SKVNVLERHFQGNNTLVQVEIQSGRPHQIRIHLSFIGNPLLGDPLYVAGGHPICFDSESR 722
           S V VLER  + N TLVQVEIQSGRPHQIRIHLSFIG PL+GDPLYV+GG P CF  E  
Sbjct: 260 SSVRVLERDSENNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPELM 319

Query: 723 DEGYTEDGGYPRPTKPVPGDCGYCLHAHRVALRHPTTNEVMEITAPLPSILQTKE 887
           DE + +DGGY RP  PVPGDCGY LHAH++ L HP TNE+++ITAPLP+ILQT+E
Sbjct: 320 DESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTRE 374


>ref|XP_007009784.1| Pseudouridine synthase family protein [Theobroma cacao]
           gi|508726697|gb|EOY18594.1| Pseudouridine synthase
           family protein [Theobroma cacao]
          Length = 378

 Score =  364 bits (935), Expect = 2e-98
 Identities = 187/296 (63%), Positives = 216/296 (72%), Gaps = 1/296 (0%)
 Frame = +3

Query: 3   RPGSELVYHRLPWKEPDAPFXXXXXXXXXXXXXXNKPSGLQVLPGGLFQQRTVLSQLQWR 182
           R  SELVYHRLPWKEPDAP               NKPSGLQVLPGGLFQQRTVL+QL WR
Sbjct: 79  RGSSELVYHRLPWKEPDAPHALEVLYEDDDMIALNKPSGLQVLPGGLFQQRTVLTQLSWR 138

Query: 183 AQKMQLGSSGTLEAQVPHLVPVHRLGRGTSGIXXXXXXXXXXXXXXXYFADGTSVVANQR 362
            +K     + +L +Q  H VPVHRLGRGTSGI               YFADGTS++    
Sbjct: 139 MRKQ----TSSLASQESHPVPVHRLGRGTSGILLCAKTKAAKTCLAAYFADGTSLIGAN- 193

Query: 363 CAENTKDHFS-VRKILKVYRALVSGIIDKDEVVIEQPIGMIRYPGVAKGLYAASLSGKPA 539
              N K   S  RKI K+YRALV+GI+ +D+VVI QPIG+++YPGVAKGLY AS SGKPA
Sbjct: 194 --SNRKMQPSCTRKISKIYRALVTGILGEDKVVINQPIGIVQYPGVAKGLYVASPSGKPA 251

Query: 540 LSKVNVLERHFQGNNTLVQVEIQSGRPHQIRIHLSFIGNPLLGDPLYVAGGHPICFDSES 719
           LSKV VLE+  Q N+TLVQV+I+SGRPHQIRIHLSFIG+PLLGDPLY+AGG P CFDSE 
Sbjct: 252 LSKVEVLEKDEQQNHTLVQVQIESGRPHQIRIHLSFIGHPLLGDPLYIAGGQPRCFDSEF 311

Query: 720 RDEGYTEDGGYPRPTKPVPGDCGYCLHAHRVALRHPTTNEVMEITAPLPSILQTKE 887
            DE Y +DGGY RP  PVPGDCGY LHAHR+ L HPTT+E++ ITAPLP +LQT++
Sbjct: 312 VDENYAQDGGYQRPVNPVPGDCGYYLHAHRLLLSHPTTDEIINITAPLPPVLQTQD 367


>ref|XP_004233537.1| PREDICTED: RNA pseudourine synthase 5-like [Solanum lycopersicum]
          Length = 402

 Score =  364 bits (935), Expect = 2e-98
 Identities = 186/295 (63%), Positives = 217/295 (73%)
 Frame = +3

Query: 3   RPGSELVYHRLPWKEPDAPFXXXXXXXXXXXXXXNKPSGLQVLPGGLFQQRTVLSQLQWR 182
           R G+ELVYHRLPW+EPDAP+              NKPSGLQVLPGGL+QQRTVL+QLQW 
Sbjct: 104 RAGAELVYHRLPWREPDAPYLLEVLFEDDYLIVVNKPSGLQVLPGGLYQQRTVLTQLQWH 163

Query: 183 AQKMQLGSSGTLEAQVPHLVPVHRLGRGTSGIXXXXXXXXXXXXXXXYFADGTSVVANQR 362
           A K+   SSG    Q  H VPVHRLGRGTSGI               YFA+GTSVV  ++
Sbjct: 164 ACKLTTTSSG---CQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVV-EEK 219

Query: 363 CAENTKDHFSVRKILKVYRALVSGIIDKDEVVIEQPIGMIRYPGVAKGLYAASLSGKPAL 542
           C  +  +  ++RKI K+YRALVSG++D DE VI+QPIG I+YPGVAKGLY AS SGKPAL
Sbjct: 220 CTNSECN--TMRKICKIYRALVSGVMDMDEAVIKQPIGTIKYPGVAKGLYVASPSGKPAL 277

Query: 543 SKVNVLERHFQGNNTLVQVEIQSGRPHQIRIHLSFIGNPLLGDPLYVAGGHPICFDSESR 722
           S V VLER  + N TLVQVEIQSGRPHQIRIHLSFIG PL+GDPLYV+GG P CF  E  
Sbjct: 278 SSVRVLERDSESNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPELL 337

Query: 723 DEGYTEDGGYPRPTKPVPGDCGYCLHAHRVALRHPTTNEVMEITAPLPSILQTKE 887
           DE + +DGGY RP  PVPGDCGY LHAH++ L HP TNE+++ITAPLP+ILQT++
Sbjct: 338 DESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTRD 392


>gb|EXB80105.1| RNA pseudourine synthase 5 [Morus notabilis]
          Length = 377

 Score =  363 bits (933), Expect = 4e-98
 Identities = 186/293 (63%), Positives = 215/293 (73%)
 Frame = +3

Query: 9   GSELVYHRLPWKEPDAPFXXXXXXXXXXXXXXNKPSGLQVLPGGLFQQRTVLSQLQWRAQ 188
           GSELVYHRLPWKEP AP+              +KPS LQVLPGGLFQQRTVL+QLQWRA 
Sbjct: 83  GSELVYHRLPWKEPGAPYILEILYEDGDMIALDKPSELQVLPGGLFQQRTVLTQLQWRAT 142

Query: 189 KMQLGSSGTLEAQVPHLVPVHRLGRGTSGIXXXXXXXXXXXXXXXYFADGTSVVANQRCA 368
           K     S +L    P+ VPVHRLGRGTSGI               YFADGTS V     +
Sbjct: 143 KQ----SSSLVCCEPNPVPVHRLGRGTSGILLCAKTKFAKTQLAAYFADGTSYVGGN--S 196

Query: 369 ENTKDHFSVRKILKVYRALVSGIIDKDEVVIEQPIGMIRYPGVAKGLYAASLSGKPALSK 548
           +N  +  + RKILK+YRALV+GI+ +D+V++EQPIG ++YPGVAKGLY AS SGKPALSK
Sbjct: 197 KNNLELNARRKILKIYRALVTGIVCEDKVIVEQPIGTVQYPGVAKGLYVASPSGKPALSK 256

Query: 549 VNVLERHFQGNNTLVQVEIQSGRPHQIRIHLSFIGNPLLGDPLYVAGGHPICFDSESRDE 728
           V VLER  + N TLV+VEIQSGRPHQIRIHLSFIG+PLLGDPLYV GG P CFD E  D 
Sbjct: 257 VEVLERDVEKNCTLVKVEIQSGRPHQIRIHLSFIGHPLLGDPLYVVGGRPRCFDPEFVDG 316

Query: 729 GYTEDGGYPRPTKPVPGDCGYCLHAHRVALRHPTTNEVMEITAPLPSILQTKE 887
            + +DGG+PRP KPVPGDCGY LHAH V+L HPTTNEV+EITAPLP +L T++
Sbjct: 317 SFAQDGGFPRPAKPVPGDCGYTLHAHHVSLSHPTTNEVIEITAPLPPVLWTRQ 369


>ref|XP_006346978.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X4 [Solanum
           tuberosum]
          Length = 349

 Score =  363 bits (933), Expect = 4e-98
 Identities = 187/293 (63%), Positives = 216/293 (73%)
 Frame = +3

Query: 9   GSELVYHRLPWKEPDAPFXXXXXXXXXXXXXXNKPSGLQVLPGGLFQQRTVLSQLQWRAQ 188
           G+ELVYHRLPW+EPDAP+              NKPSGLQVLPGGL+QQRTVL+QLQW A 
Sbjct: 58  GAELVYHRLPWREPDAPYLLEVLFQDDYLIVVNKPSGLQVLPGGLYQQRTVLTQLQWHAC 117

Query: 189 KMQLGSSGTLEAQVPHLVPVHRLGRGTSGIXXXXXXXXXXXXXXXYFADGTSVVANQRCA 368
           K    SSG    Q  H VPVHRLGRGTSGI               YFA+GTSVV + +C 
Sbjct: 118 KPTTTSSG---CQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVVED-KCT 173

Query: 369 ENTKDHFSVRKILKVYRALVSGIIDKDEVVIEQPIGMIRYPGVAKGLYAASLSGKPALSK 548
            +  +  ++RKI K+YRALVSG++D DEVVI+QPIG I+YPGVAKGLY AS SGKPALS 
Sbjct: 174 NSECN--TMRKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAKGLYVASPSGKPALSS 231

Query: 549 VNVLERHFQGNNTLVQVEIQSGRPHQIRIHLSFIGNPLLGDPLYVAGGHPICFDSESRDE 728
           V VLER  + N TLVQVEIQSGRPHQIRIHLSFIG PL+GDPLYV+GG P CF  E  DE
Sbjct: 232 VRVLERDSENNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPELMDE 291

Query: 729 GYTEDGGYPRPTKPVPGDCGYCLHAHRVALRHPTTNEVMEITAPLPSILQTKE 887
            + +DGGY RP  PVPGDCGY LHAH++ L HP TNE+++ITAPLP+ILQT+E
Sbjct: 292 SFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTRE 344


>ref|XP_004307403.1| PREDICTED: RNA pseudourine synthase 5-like [Fragaria vesca subsp.
           vesca]
          Length = 375

 Score =  363 bits (933), Expect = 4e-98
 Identities = 188/296 (63%), Positives = 218/296 (73%), Gaps = 1/296 (0%)
 Frame = +3

Query: 3   RPGSELVYHRLPWKEPDAPFXXXXXXXXXXXXXXNKPSGLQVLPGGLFQQRTVLSQLQWR 182
           R GSELVYHRLPW EPDAP+              NKP GLQVLPGGLFQQRTVL+QL WR
Sbjct: 80  RVGSELVYHRLPWGEPDAPYLLEVLYEDDDMIALNKPGGLQVLPGGLFQQRTVLTQLLWR 139

Query: 183 -AQKMQLGSSGTLEAQVPHLVPVHRLGRGTSGIXXXXXXXXXXXXXXXYFADGTSVVANQ 359
            +QK        L  Q  HLVPVHRLGRGTSGI               YFADGTS + + 
Sbjct: 140 ESQKFD-----HLACQKSHLVPVHRLGRGTSGILLCAKTKHAKTQLAAYFADGTSHIGDD 194

Query: 360 RCAENTKDHFSVRKILKVYRALVSGIIDKDEVVIEQPIGMIRYPGVAKGLYAASLSGKPA 539
               NTK H + RKI K+YRALV+GII +DEV+++QPIG +RYPGVAKGLY AS +GKPA
Sbjct: 195 STT-NTKLH-TTRKITKIYRALVTGIICEDEVIVKQPIGTVRYPGVAKGLYIASPAGKPA 252

Query: 540 LSKVNVLERHFQGNNTLVQVEIQSGRPHQIRIHLSFIGNPLLGDPLYVAGGHPICFDSES 719
           LSKV VL+R  Q N+T+VQVEIQSGRPHQIRIHLSFIG+PLLGDPLYVAGG P C  S+ 
Sbjct: 253 LSKVEVLDRDIQKNHTIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPKCLGSDL 312

Query: 720 RDEGYTEDGGYPRPTKPVPGDCGYCLHAHRVALRHPTTNEVMEITAPLPSILQTKE 887
            DE + +DGG+ RPTKPVPGDCGY LHAH+V L HP++NEV++ITAPLP +L+T+E
Sbjct: 313 VDESFADDGGFKRPTKPVPGDCGYNLHAHQVVLSHPSSNEVIKITAPLPLVLRTRE 368


>ref|XP_004496322.1| PREDICTED: RNA pseudourine synthase 5-like [Cicer arietinum]
          Length = 368

 Score =  363 bits (932), Expect = 5e-98
 Identities = 186/296 (62%), Positives = 212/296 (71%), Gaps = 1/296 (0%)
 Frame = +3

Query: 3   RPGSELVYHRLPWKEPDAPFXXXXXXXXXXXXXXNKPSGLQVLPGGLFQQRTVLSQLQWR 182
           R GS+LVYHRLPWKEPDAP               NKPSGLQVLPGGLFQQRTVL+QLQW 
Sbjct: 74  RAGSKLVYHRLPWKEPDAPHTIQVLYEDDDIIALNKPSGLQVLPGGLFQQRTVLTQLQW- 132

Query: 183 AQKMQLGSSGTLEA-QVPHLVPVHRLGRGTSGIXXXXXXXXXXXXXXXYFADGTSVVANQ 359
               +  +  T EA Q PH VPVHRLGRGTSGI               YFADGTS +  +
Sbjct: 133 ----ETNNKCTFEAHQKPHPVPVHRLGRGTSGILLCAKTKLARVHLASYFADGTSRIGGK 188

Query: 360 RCAENTKDHFSVRKILKVYRALVSGIIDKDEVVIEQPIGMIRYPGVAKGLYAASLSGKPA 539
           R          + KI K+YRALVSGIID D+V I+QPIGM++YPGVAKGLY AS SGKPA
Sbjct: 189 RDTNQ-----ELGKIAKIYRALVSGIIDNDKVTIDQPIGMVKYPGVAKGLYVASQSGKPA 243

Query: 540 LSKVNVLERHFQGNNTLVQVEIQSGRPHQIRIHLSFIGNPLLGDPLYVAGGHPICFDSES 719
           LS V++LER+ + N+TLVQV+IQSGRPHQIRIHLSFIG+PL+GDPLY  GG P C D + 
Sbjct: 244 LSVVDILERNVKENSTLVQVKIQSGRPHQIRIHLSFIGHPLIGDPLYAVGGQPKCLDYDF 303

Query: 720 RDEGYTEDGGYPRPTKPVPGDCGYCLHAHRVALRHPTTNEVMEITAPLPSILQTKE 887
            D+ + EDGGYPRP KPVPGDCGY LHAH + L HP TNE++EI APLPSILQT E
Sbjct: 304 LDDSFAEDGGYPRPPKPVPGDCGYYLHAHELLLTHPITNEIIEIIAPLPSILQTHE 359


>ref|XP_007143685.1| hypothetical protein PHAVU_007G093000g [Phaseolus vulgaris]
           gi|561016875|gb|ESW15679.1| hypothetical protein
           PHAVU_007G093000g [Phaseolus vulgaris]
          Length = 365

 Score =  358 bits (920), Expect = 1e-96
 Identities = 183/295 (62%), Positives = 207/295 (70%)
 Frame = +3

Query: 3   RPGSELVYHRLPWKEPDAPFXXXXXXXXXXXXXXNKPSGLQVLPGGLFQQRTVLSQLQWR 182
           R GS+LVYHRLPWKEPDAP               NKPSGLQVLPGGLFQQRTVL+QLQW 
Sbjct: 74  RVGSKLVYHRLPWKEPDAPHMIEVLYEDDEMIALNKPSGLQVLPGGLFQQRTVLTQLQWE 133

Query: 183 AQKMQLGSSGTLEAQVPHLVPVHRLGRGTSGIXXXXXXXXXXXXXXXYFADGTSVVANQR 362
           A   +           PH VPVHRLGRGTSGI               YFADGTS +  +R
Sbjct: 134 ANLHKK----------PHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSHIGGKR 183

Query: 363 CAENTKDHFSVRKILKVYRALVSGIIDKDEVVIEQPIGMIRYPGVAKGLYAASLSGKPAL 542
                     + KI K+YR L SGI++ DEV I QPIG+++YPGVAKGLY AS SGKPAL
Sbjct: 184 DTNG-----EIGKIAKIYRGLASGIVENDEVTINQPIGVVKYPGVAKGLYVASQSGKPAL 238

Query: 543 SKVNVLERHFQGNNTLVQVEIQSGRPHQIRIHLSFIGNPLLGDPLYVAGGHPICFDSESR 722
           S V +LER+ Q N+TLVQV+IQSGRPHQIRIHLSFIG+PLLGDPLY  GG P C D +S 
Sbjct: 239 SVVGILERNVQENSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYGDGGQPKCLDCDSI 298

Query: 723 DEGYTEDGGYPRPTKPVPGDCGYCLHAHRVALRHPTTNEVMEITAPLPSILQTKE 887
           DE + EDGGY RPTKPVPGDCGY LHAH++ L HP TNE++EITAPLPS+LQT E
Sbjct: 299 DESFAEDGGYQRPTKPVPGDCGYNLHAHKLVLSHPLTNELIEITAPLPSVLQTPE 353


>ref|XP_002276664.1| PREDICTED: RNA pseudourine synthase 5-like [Vitis vinifera]
          Length = 348

 Score =  357 bits (917), Expect = 3e-96
 Identities = 181/279 (64%), Positives = 205/279 (73%)
 Frame = +3

Query: 3   RPGSELVYHRLPWKEPDAPFXXXXXXXXXXXXXXNKPSGLQVLPGGLFQQRTVLSQLQWR 182
           R GS+LVYHRLPW+EPDAP+              NKPSGLQVLPGGLFQQRTVL+QLQWR
Sbjct: 72  RAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRTVLTQLQWR 131

Query: 183 AQKMQLGSSGTLEAQVPHLVPVHRLGRGTSGIXXXXXXXXXXXXXXXYFADGTSVVANQR 362
           A K     +     Q  H VPVHRLGRGTSGI               YFADGTSVV   R
Sbjct: 132 ANKQ----NSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSVVGGNR 187

Query: 363 CAENTKDHFSVRKILKVYRALVSGIIDKDEVVIEQPIGMIRYPGVAKGLYAASLSGKPAL 542
              + K   ++RKI K+YRALV+GI+DKDE+VIEQPIGM++YPGVAKGLY AS SGKPAL
Sbjct: 188 LDADMKSR-TMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGKPAL 246

Query: 543 SKVNVLERHFQGNNTLVQVEIQSGRPHQIRIHLSFIGNPLLGDPLYVAGGHPICFDSESR 722
           SKV++LER  QG++ +VQVEIQSGRPHQIRIHLSFIG+PLLGDPLYV GG P C D+E  
Sbjct: 247 SKVSILERDVQGDHMIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCDAEFT 306

Query: 723 DEGYTEDGGYPRPTKPVPGDCGYCLHAHRVALRHPTTNE 839
           +E Y  DGGY RP KPVPGDCGY LHAH++ L HPTTNE
Sbjct: 307 NESYALDGGYQRPVKPVPGDCGYHLHAHQLVLSHPTTNE 345


>emb|CBI31488.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  356 bits (913), Expect = 8e-96
 Identities = 181/279 (64%), Positives = 205/279 (73%)
 Frame = +3

Query: 3   RPGSELVYHRLPWKEPDAPFXXXXXXXXXXXXXXNKPSGLQVLPGGLFQQRTVLSQLQWR 182
           R GS+LVYHRLPW+EPDAP+              NKPSGLQVLPGGLFQQRTVL+QLQWR
Sbjct: 72  RAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRTVLTQLQWR 131

Query: 183 AQKMQLGSSGTLEAQVPHLVPVHRLGRGTSGIXXXXXXXXXXXXXXXYFADGTSVVANQR 362
           A K     +     Q  H VPVHRLGRGTSGI               YFADGTSVV   R
Sbjct: 132 ANKQ----NSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSVVGGNR 187

Query: 363 CAENTKDHFSVRKILKVYRALVSGIIDKDEVVIEQPIGMIRYPGVAKGLYAASLSGKPAL 542
            A+      ++RKI K+YRALV+GI+DKDE+VIEQPIGM++YPGVAKGLY AS SGKPAL
Sbjct: 188 DADMKSR--TMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGKPAL 245

Query: 543 SKVNVLERHFQGNNTLVQVEIQSGRPHQIRIHLSFIGNPLLGDPLYVAGGHPICFDSESR 722
           SKV++LER  QG++ +VQVEIQSGRPHQIRIHLSFIG+PLLGDPLYV GG P C D+E  
Sbjct: 246 SKVSILERDVQGDHMIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCDAEFT 305

Query: 723 DEGYTEDGGYPRPTKPVPGDCGYCLHAHRVALRHPTTNE 839
           +E Y  DGGY RP KPVPGDCGY LHAH++ L HPTTNE
Sbjct: 306 NESYALDGGYQRPVKPVPGDCGYHLHAHQLVLSHPTTNE 344


>ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatula]
           gi|358349060|ref|XP_003638558.1| RNA pseudourine
           synthase [Medicago truncatula]
           gi|355481000|gb|AES62203.1| RNA pseudourine synthase
           [Medicago truncatula] gi|355504493|gb|AES85696.1| RNA
           pseudourine synthase [Medicago truncatula]
          Length = 371

 Score =  354 bits (909), Expect = 2e-95
 Identities = 185/297 (62%), Positives = 212/297 (71%), Gaps = 2/297 (0%)
 Frame = +3

Query: 3   RPGSELVYHRLPWKEPDAPFXXXXXXXXXXXXXXNKPSGLQVLPGGLFQQRTVLSQLQWR 182
           R GS+LVYHR+PWKEPDAP               NKPSGLQVLPGGLFQQRTVL+QLQW 
Sbjct: 74  RVGSKLVYHRIPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGLFQQRTVLTQLQW- 132

Query: 183 AQKMQLGSSGTLEA-QVPHLVPVHRLGRGTSGIXXXXXXXXXXXXXXXYFADGTSVVANQ 359
               +  +  T+EA Q PH VPVHRLGRGTSGI               YFADGTS +  +
Sbjct: 133 ----ETNNKSTIEAHQKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSRIEGK 188

Query: 360 RCAENTKDHFSVRKILKVYRALVSGIIDKDEVVIEQPIGMIRYPGVAKGLYAASLSGKPA 539
                      + KI K+YRALVSGII+ D+V I QPIGM++YPGVAKGLY AS SGKPA
Sbjct: 189 GHTNQ-----ELGKIAKIYRALVSGIINNDQVTINQPIGMVKYPGVAKGLYVASQSGKPA 243

Query: 540 LSKVNVLERHFQGNNTLVQV-EIQSGRPHQIRIHLSFIGNPLLGDPLYVAGGHPICFDSE 716
           LS V+VLER+ + N+TLVQV +IQSGRPHQIRIHLSFIG+PLLGDPLY  GG P C D +
Sbjct: 244 LSVVHVLERNVKENSTLVQVVKIQSGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLDCD 303

Query: 717 SRDEGYTEDGGYPRPTKPVPGDCGYCLHAHRVALRHPTTNEVMEITAPLPSILQTKE 887
             DE + EDGGY RP+KPVPGDCGY LHAHR+ L HP TNE++E+ APLPSILQT E
Sbjct: 304 FLDESFAEDGGYTRPSKPVPGDCGYHLHAHRLFLSHPITNEIIEMIAPLPSILQTHE 360


>gb|EYU39826.1| hypothetical protein MIMGU_mgv1a008941mg [Mimulus guttatus]
          Length = 357

 Score =  353 bits (905), Expect = 6e-95
 Identities = 185/292 (63%), Positives = 205/292 (70%)
 Frame = +3

Query: 3   RPGSELVYHRLPWKEPDAPFXXXXXXXXXXXXXXNKPSGLQVLPGGLFQQRTVLSQLQWR 182
           R G+ELVYHRLPWKEPDAP               NKPSGLQVLPGGLFQQRTVL+QLQ  
Sbjct: 71  RGGAELVYHRLPWKEPDAPHLVEILYEDDDVIALNKPSGLQVLPGGLFQQRTVLTQLQRH 130

Query: 183 AQKMQLGSSGTLEAQVPHLVPVHRLGRGTSGIXXXXXXXXXXXXXXXYFADGTSVVANQR 362
           A             Q PH VPVHRLGRGTSGI               +FADGTSVV    
Sbjct: 131 AGG----------CQEPHPVPVHRLGRGTSGILLCAKTKLAKSRLAAFFADGTSVVGV-- 178

Query: 363 CAENTKDHFSVRKILKVYRALVSGIIDKDEVVIEQPIGMIRYPGVAKGLYAASLSGKPAL 542
           C EN +   S R I K+YRAL SGII +DEVVI+QPIG+++YPGVA GLY AS SGKPA 
Sbjct: 179 CRENDQQQKSTRNITKLYRALASGIIIEDEVVIDQPIGLVKYPGVANGLYVASPSGKPAW 238

Query: 543 SKVNVLERHFQGNNTLVQVEIQSGRPHQIRIHLSFIGNPLLGDPLYVAGGHPICFDSESR 722
           SKV VLER+   N+TLVQVEIQSGRPHQIRIHLSFIG+PL+GDPLY  GG P C D E  
Sbjct: 239 SKVVVLERNMLNNSTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYSTGGQPKCSDHELV 298

Query: 723 DEGYTEDGGYPRPTKPVPGDCGYCLHAHRVALRHPTTNEVMEITAPLPSILQ 878
           D+ + EDGGY RP KPVPGDCGY LHAHRV   HP +NE++EITAPLPSIL+
Sbjct: 299 DQSFAEDGGYERPEKPVPGDCGYHLHAHRVLFTHPVSNEIIEITAPLPSILR 350


>ref|XP_003556222.1| PREDICTED: RNA pseudouridine synthase 5-like [Glycine max]
          Length = 371

 Score =  351 bits (900), Expect = 2e-94
 Identities = 182/296 (61%), Positives = 210/296 (70%), Gaps = 1/296 (0%)
 Frame = +3

Query: 3   RPGSELVYHRLPWKEPDAPFXXXXXXXXXXXXXXNKPSGLQVLPGGLFQQRTVLSQLQWR 182
           R GS+L+YHRLPWKEPDAP               NKPSGLQVLPGGL+QQRT+L+QLQW 
Sbjct: 74  RVGSKLIYHRLPWKEPDAPHMIDVLYEDDDMIALNKPSGLQVLPGGLYQQRTILTQLQWE 133

Query: 183 AQKMQLGSSGTLEAQVP-HLVPVHRLGRGTSGIXXXXXXXXXXXXXXXYFADGTSVVANQ 359
           A      + GT E     H VPVHRLGRGTSGI               +FADGTS V  +
Sbjct: 134 AN-----NQGTCEMHKRLHPVPVHRLGRGTSGILLCAKTKLARARLASHFADGTSHVGGK 188

Query: 360 RCAENTKDHFSVRKILKVYRALVSGIIDKDEVVIEQPIGMIRYPGVAKGLYAASLSGKPA 539
           R   +TK      KI K+YRALVSGI++ D+V I QPIG+++YPGVAKGLY AS SGKPA
Sbjct: 189 R---DTKQELG--KIAKMYRALVSGIVENDKVTINQPIGIVKYPGVAKGLYVASESGKPA 243

Query: 540 LSKVNVLERHFQGNNTLVQVEIQSGRPHQIRIHLSFIGNPLLGDPLYVAGGHPICFDSES 719
           LS V++LE + Q N+TLVQV+IQSGRPHQIRIHLSFIG+PLLGDPLY  GG P C D + 
Sbjct: 244 LSVVDILETNIQENSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYGVGGQPKCLDCDF 303

Query: 720 RDEGYTEDGGYPRPTKPVPGDCGYCLHAHRVALRHPTTNEVMEITAPLPSILQTKE 887
            DE + EDGGY RPTKPVPGDCGY LHAH++ L HPTTNE++EI APLPS L T E
Sbjct: 304 VDESFAEDGGYQRPTKPVPGDCGYYLHAHKLVLSHPTTNELIEIIAPLPSALHTAE 359


>ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  346 bits (888), Expect = 6e-93
 Identities = 180/294 (61%), Positives = 208/294 (70%)
 Frame = +3

Query: 3   RPGSELVYHRLPWKEPDAPFXXXXXXXXXXXXXXNKPSGLQVLPGGLFQQRTVLSQLQWR 182
           R GS+LVY RLPWKEPD P+              NKPSGLQVLPGG+FQQRTVL+QLQW 
Sbjct: 77  RIGSDLVYRRLPWKEPDTPYLLEILYEDNEMIALNKPSGLQVLPGGVFQQRTVLTQLQWW 136

Query: 183 AQKMQLGSSGTLEAQVPHLVPVHRLGRGTSGIXXXXXXXXXXXXXXXYFADGTSVVANQR 362
           + K     S  L     H VPVHRLGRGTSGI               YFA+GTS V   R
Sbjct: 137 SSKQSFSVSEEL-----HPVPVHRLGRGTSGILLCAKTKLARTQFAAYFAEGTSSVRRNR 191

Query: 363 CAENTKDHFSVRKILKVYRALVSGIIDKDEVVIEQPIGMIRYPGVAKGLYAASLSGKPAL 542
              +T +  + RKI K+YRALV+GII  DEV ++QPIG ++YPGVA+GLY A+ SGKPA 
Sbjct: 192 --NSTMEEGTKRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKPAC 249

Query: 543 SKVNVLERHFQGNNTLVQVEIQSGRPHQIRIHLSFIGNPLLGDPLYVAGGHPICFDSESR 722
           SKVNVLER  Q  +TLVQVEIQSGRPHQIRIHLS IG+PLLGDPLYVAGG P C  SE  
Sbjct: 250 SKVNVLERDEQSKHTLVQVEIQSGRPHQIRIHLSSIGHPLLGDPLYVAGGQPNCLHSEVV 309

Query: 723 DEGYTEDGGYPRPTKPVPGDCGYCLHAHRVALRHPTTNEVMEITAPLPSILQTK 884
           ++ + EDGGY RPTKPVPGDCGY LHAH++ L HP TNEV++I APLP IL+T+
Sbjct: 310 NQSFAEDGGYERPTKPVPGDCGYYLHAHQLILYHPKTNEVVKIIAPLPPILRTR 363


>ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  345 bits (885), Expect = 1e-92
 Identities = 179/294 (60%), Positives = 208/294 (70%)
 Frame = +3

Query: 3   RPGSELVYHRLPWKEPDAPFXXXXXXXXXXXXXXNKPSGLQVLPGGLFQQRTVLSQLQWR 182
           R GS+LVY RLPWKEPD P+              NKPSGLQVLPGG+FQQRTVL+QLQW 
Sbjct: 77  RIGSDLVYRRLPWKEPDTPYLLEILYEDNEMIALNKPSGLQVLPGGVFQQRTVLTQLQWW 136

Query: 183 AQKMQLGSSGTLEAQVPHLVPVHRLGRGTSGIXXXXXXXXXXXXXXXYFADGTSVVANQR 362
           + K     S  L     H VPVHRLGRGTSGI               YFA+GTS V   R
Sbjct: 137 SSKQSFSVSEEL-----HPVPVHRLGRGTSGILLCAKTKLARTQFAAYFAEGTSSVRRNR 191

Query: 363 CAENTKDHFSVRKILKVYRALVSGIIDKDEVVIEQPIGMIRYPGVAKGLYAASLSGKPAL 542
              +T +  + RKI K+YRALV+GII  DEV ++QPIG ++YPGVA+GLY A+ SGKPA 
Sbjct: 192 --NSTMEEGTKRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKPAC 249

Query: 543 SKVNVLERHFQGNNTLVQVEIQSGRPHQIRIHLSFIGNPLLGDPLYVAGGHPICFDSESR 722
           SKVNVLER  Q  +TLVQVEIQSGRPHQIRIHLS IG+PL+GDPLYVAGG P C  SE  
Sbjct: 250 SKVNVLERDEQSKHTLVQVEIQSGRPHQIRIHLSSIGHPLVGDPLYVAGGQPNCLHSEVV 309

Query: 723 DEGYTEDGGYPRPTKPVPGDCGYCLHAHRVALRHPTTNEVMEITAPLPSILQTK 884
           ++ + EDGGY RPTKPVPGDCGY LHAH++ L HP TNEV++I APLP IL+T+
Sbjct: 310 NQSFAEDGGYERPTKPVPGDCGYYLHAHQLILYHPKTNEVVKIIAPLPPILRTR 363