BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00002190
         (2017 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [A...   363   e-138
emb|CBI29694.3| unnamed protein product [Vitis vinifera]              366   e-132
ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Popu...   347   e-129
ref|XP_006385052.1| Smg-4/UPF3 family protein [Populus trichocar...   347   e-127
ref|XP_007041200.1| Smg-4/UPF3 family protein, putative isoform ...   374   e-126
ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts...   358   e-123
ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr...   358   e-123
ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Popu...   330   e-120
ref|XP_007041201.1| Smg-4/UPF3 family protein, putative isoform ...   367   e-116
gb|EYU26454.1| hypothetical protein MIMGU_mgv1a004529mg [Mimulus...   337   e-116
gb|EYU26453.1| hypothetical protein MIMGU_mgv1a004529mg [Mimulus...   334   e-115
ref|XP_004485448.1| PREDICTED: regulator of nonsense transcripts...   330   e-112
ref|XP_007148572.1| hypothetical protein PHAVU_006G219800g [Phas...   324   e-111
ref|XP_007221816.1| hypothetical protein PRUPE_ppa004923mg [Prun...   356   e-111
ref|XP_007221815.1| hypothetical protein PRUPE_ppa004923mg [Prun...   356   e-111
ref|XP_006592654.1| PREDICTED: regulator of nonsense transcripts...   335   e-110
ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts...   320   e-109
ref|XP_006598794.1| PREDICTED: regulator of nonsense transcripts...   324   e-109
ref|XP_004485447.1| PREDICTED: regulator of nonsense transcripts...   330   e-107
ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts...   321   e-107

>ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [Amborella trichopoda]
            gi|548862693|gb|ERN20051.1| hypothetical protein
            AMTR_s00071p00188270 [Amborella trichopoda]
          Length = 599

 Score =  363 bits (932), Expect(2) = e-138
 Identities = 184/261 (70%), Positives = 214/261 (81%)
 Frame = +2

Query: 221  MKDPLDRTKVVLRHLPPGISQSALLDQIDSRFSGRYRWFSFRPGKTSQSYQLYSRAYIDF 400
            MKDPLDRTKVV+R LPP ++Q AL+++IDSRFSGRY W +FRPGK S   Q +SR YIDF
Sbjct: 1    MKDPLDRTKVVVRRLPPALTQQALMEKIDSRFSGRYEWAAFRPGKNSLKNQRHSRIYIDF 60

Query: 401  NGREDVVEFAEFFDGRVFVNEKGAQFKCIVEYAPSQRVPKVSSKKDGREGTISKDPEYLE 580
               EDV+EFAEFF G VFVNEKG+QFK +VEYAPSQRVPK  SKKDGREGTI KDPEYLE
Sbjct: 61   KRPEDVLEFAEFFVGHVFVNEKGSQFKAVVEYAPSQRVPKPWSKKDGREGTIFKDPEYLE 120

Query: 581  FLELLAKPVENLPSAEIQLERREAERVGAAKETPIVTPLMDFVRQKRAAKSGSQRPTSNG 760
            FLE LAKP ENLPSAEIQLERREAER GA+KE+ IVTPLMDFVRQKRAAKSG+ R ++NG
Sbjct: 121  FLEFLAKPAENLPSAEIQLERREAERAGASKESLIVTPLMDFVRQKRAAKSGTLRSSANG 180

Query: 761  KLSRKATGAAPGNSRSASTKRGLEKRKASTSMYVLRDSGKNASGKDKATYILVPRREDHQ 940
            K SR++TG +  +  S S KRG E+RK STSMYVLRDS K  S KDK+TY LVPRR++ +
Sbjct: 181  KTSRRSTGVSSTSPGSNSQKRGPERRKISTSMYVLRDSTKGTSSKDKSTYGLVPRRDEQK 240

Query: 941  LPDKSIAIAAIAGHEKINDNS 1003
            LPD S A++A+AG E ++D S
Sbjct: 241  LPDNSSAVSALAGPEALDDES 261



 Score =  158 bits (400), Expect(2) = e-138
 Identities = 116/317 (36%), Positives = 164/317 (51%), Gaps = 10/317 (3%)
 Frame = +3

Query: 1080 ASRVVSQQQTETSPAKNFPVSTS-KVNQQREASARMIRSILSNKEARXXXXXXXXXXXX- 1253
            AS  V QQQT +SP +N   S   + +Q+R+ ++RM++SILSNK+ R             
Sbjct: 296  ASGSVVQQQTVSSPIRNLSGSAPFRQSQRRDGNSRMVKSILSNKDGRQVPAHVLTQTEQQ 355

Query: 1254 IESSDLE-DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXXDKVVGNVHHTAGHIS 1430
            ++   LE DKR  R  + R  S+DH                     K+ GN  +     +
Sbjct: 356  LQGLSLEKDKRPPRPNSTRLASKDHLSGYLMPTSMSDSDPKKALDQKITGNDSYGLVPAN 415

Query: 1431 EKKEKRTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXXEEKTIAQAVAS 1610
            EK+EKRTRNKDRPDR  WTPLRRS+G+H  DE                 E+ + AQ +  
Sbjct: 416  EKQEKRTRNKDRPDRAVWTPLRRSDGIHTVDE---------SQMTSDSLEKLSNAQELKL 466

Query: 1611 SGVDVIEDMD--SSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVP 1784
               D  E+ D   S   S +G K +  D+  + ++ GRG  S S+ +  L+  + K D  
Sbjct: 467  G--DDTEECDGLGSNASSSMG-KSRTSDLGYHNSRSGRGASS-SSSEHSLNQGDTKFDTS 522

Query: 1785 NANRGGQIKSHGSSRNNFSSIENGG-RHF-RRGPSHGSKDVDNFMVPTEGKSSKRGGATS 1958
            +A+R  ++K+ G+ R++  S+ENG  RH  RR  S G KD D  M   +GK  KRGG  S
Sbjct: 523  SASRSLEMKTQGTGRSSTVSVENGSHRHAGRRSSSTGLKDADGSMNLPDGKPVKRGGIPS 582

Query: 1959 ---HEKQVWVQKSGSGS 2000
               HEKQ+WVQKSG+G+
Sbjct: 583  YGAHEKQIWVQKSGTGT 599


>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  366 bits (940), Expect(2) = e-132
 Identities = 187/273 (68%), Positives = 217/273 (79%)
 Frame = +2

Query: 221  MKDPLDRTKVVLRHLPPGISQSALLDQIDSRFSGRYRWFSFRPGKTSQSYQLYSRAYIDF 400
            MK PLDRTKVV+RHLPP IS++A L+QID+ F GRY    FRPGK SQ  Q YSRAY+DF
Sbjct: 1    MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF 60

Query: 401  NGREDVVEFAEFFDGRVFVNEKGAQFKCIVEYAPSQRVPKVSSKKDGREGTISKDPEYLE 580
               EDV+EFAEFFDG VFVNEKG QFK IVEYAPSQR+PK   KKDGREGTI KDPEY+E
Sbjct: 61   KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYME 120

Query: 581  FLELLAKPVENLPSAEIQLERREAERVGAAKETPIVTPLMDFVRQKRAAKSGSQRPTSNG 760
            F+ELLAKPVENLPSAEIQLERREAER GA K+TPIVTPLMDFVRQKRAAK  S+R  SNG
Sbjct: 121  FVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNG 180

Query: 761  KLSRKATGAAPGNSRSASTKRGLEKRKASTSMYVLRDSGKNASGKDKATYILVPRREDHQ 940
            KLSR+A+G++ GN    S+KRG EKR+ ST+MYVLRD+ K+ S KDK+T+ILVP+R+D  
Sbjct: 181  KLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQL 240

Query: 941  LPDKSIAIAAIAGHEKINDNSGRSRGCCYWKKE 1039
            L DKS+ +AA  G E + + SG S      KK+
Sbjct: 241  LSDKSVNLAAGGGAEALEEESGVSGAVDAGKKK 273



 Score =  134 bits (337), Expect(2) = e-132
 Identities = 107/306 (34%), Positives = 137/306 (44%), Gaps = 7/306 (2%)
 Frame = +3

Query: 1101 QQTETSPAKNF-PVSTSKVNQQREASARMIRSILSNKEARXXXXXXXXXXXXIESSDLE- 1274
            QQ  TSP KN    +  K NQ+RE S R+IRSIL NK+AR             ++S+LE 
Sbjct: 290  QQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQASNLEK 349

Query: 1275 DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXXDKVVGNVHHTAGHISEKKEKRTR 1454
            +KR  R    +  S++                     DKVVGN  H+   +SEK++KRTR
Sbjct: 350  EKRPPRPPHIQLASKE---------------TNGAQDDKVVGNDVHS--FVSEKQDKRTR 392

Query: 1455 NKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXXEEKTIAQAVASSGVDVIED 1634
            NKDRPDRG WTPLRRS+G HASDE L                                  
Sbjct: 393  NKDRPDRGVWTPLRRSDGSHASDESL---------------------------------- 418

Query: 1635 MDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPNANRGGQIKS 1814
              S+++P+       +H    +     R G               +V    + RGG    
Sbjct: 419  SSSASQPTSSDFPEGSHGEMRSDMSNARSG---------------EVKALGSGRGGH--- 460

Query: 1815 HGSSRNNFSSIENGGRHF--RRGPSHGSKDVDNFMVPTEGKSSKRGGAT---SHEKQVWV 1979
                    S+++NG      RRGP+H  KD D   + +EGK SKRG A    SHEKQVWV
Sbjct: 461  --------SALDNGSHKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGSHEKQVWV 512

Query: 1980 QKSGSG 1997
            QKS SG
Sbjct: 513  QKSSSG 518


>ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Populus trichocarpa]
            gi|550341819|gb|ERP62848.1| hypothetical protein
            POPTR_0004s23450g [Populus trichocarpa]
          Length = 520

 Score =  347 bits (891), Expect(2) = e-129
 Identities = 174/256 (67%), Positives = 208/256 (81%)
 Frame = +2

Query: 236  DRTKVVLRHLPPGISQSALLDQIDSRFSGRYRWFSFRPGKTSQSYQLYSRAYIDFNGRED 415
            D+TKVV+RHLPPGISQ   ++QID  FSGRY W S+RPG  SQ +Q YSRAYIDF   ED
Sbjct: 8    DKTKVVVRHLPPGISQPMFVEQIDVAFSGRYNWLSYRPGNNSQKHQSYSRAYIDFKRPED 67

Query: 416  VVEFAEFFDGRVFVNEKGAQFKCIVEYAPSQRVPKVSSKKDGREGTISKDPEYLEFLELL 595
            V++FAEFF+G +FVNEKG QFK IVEY+PSQRVPK  SKKDGREGTISKDPEYLEFLEL+
Sbjct: 68   VIDFAEFFNGHIFVNEKGTQFKAIVEYSPSQRVPKQWSKKDGREGTISKDPEYLEFLELI 127

Query: 596  AKPVENLPSAEIQLERREAERVGAAKETPIVTPLMDFVRQKRAAKSGSQRPTSNGKLSRK 775
            AKPVENLPSAEIQLERREAER GAAK+ PIVTPLMDFVRQKR AK+G +R  SNGKLSR+
Sbjct: 128  AKPVENLPSAEIQLERREAERAGAAKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKLSRR 187

Query: 776  ATGAAPGNSRSASTKRGLEKRKASTSMYVLRDSGKNASGKDKATYILVPRREDHQLPDKS 955
            A G+  G+  S+S KRG EK++ ST+MYVLRD+ K+ SGKDK+TY+ VP+R+D QL   +
Sbjct: 188  AGGS--GSPSSSSLKRGSEKKRISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQL-SNA 244

Query: 956  IAIAAIAGHEKINDNS 1003
            + + + +G   + D S
Sbjct: 245  VTLGSGSGTAVLEDES 260



 Score =  143 bits (361), Expect(2) = e-129
 Identities = 115/315 (36%), Positives = 152/315 (48%), Gaps = 6/315 (1%)
 Frame = +3

Query: 1062 EQGTTVASRVVSQQQTETSPAKNFPVSTSKVNQQREASARMIRSILSNKEARXXXXXXXX 1241
            E+  ++ +  +SQQQ+ +S  +N   ST+  +Q+RE S RMIRSIL NK++R        
Sbjct: 280  EKEISLVTGTMSQQQSISSSDRNIISSTALKSQRRETSGRMIRSILLNKDSRHIRSSGVH 339

Query: 1242 XXXXIESSDLE-DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXXDKVVGNVHHTA 1418
                +++S+LE +KR  R   A+   +D                     DKVVGN  H  
Sbjct: 340  SEPQMQTSNLEKEKRPPRPPHAQLGLKD---------------ANGTPDDKVVGNDLH-- 382

Query: 1419 GHISEKKEKRTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXXEEKTIAQ 1598
            G  +EK+EKRTRNKDRPDRG WTPLRRS+G +ASDE L                      
Sbjct: 383  GFPNEKQEKRTRNKDRPDRGVWTPLRRSDGSYASDESL---------------------- 420

Query: 1599 AVASSGVDVIEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVD 1778
                     +     ST+  F   +  + D                          VKVD
Sbjct: 421  ---------LSSASQSTQSVFDSSQGNHGD--------------------------VKVD 445

Query: 1779 VPNANRGGQIKSHGSSRNNFSSIENGG-RHF-RRGPSHGSKDVDNFMVPTEGKSSKRGGA 1952
              N  R G++K  GS R N SS++NG  +HF RRGPSH  +D D   V  E K+ KRGG+
Sbjct: 446  SLNL-RSGEVKVLGSGRGNHSSLDNGSHKHFGRRGPSHIVRDADGSTV--EAKTPKRGGS 502

Query: 1953 T---SHEKQVWVQKS 1988
            +   SHEKQVWVQKS
Sbjct: 503  SGYGSHEKQVWVQKS 517


>ref|XP_006385052.1| Smg-4/UPF3 family protein [Populus trichocarpa]
            gi|550341820|gb|ERP62849.1| Smg-4/UPF3 family protein
            [Populus trichocarpa]
          Length = 527

 Score =  347 bits (891), Expect(2) = e-127
 Identities = 174/256 (67%), Positives = 208/256 (81%)
 Frame = +2

Query: 236  DRTKVVLRHLPPGISQSALLDQIDSRFSGRYRWFSFRPGKTSQSYQLYSRAYIDFNGRED 415
            D+TKVV+RHLPPGISQ   ++QID  FSGRY W S+RPG  SQ +Q YSRAYIDF   ED
Sbjct: 8    DKTKVVVRHLPPGISQPMFVEQIDVAFSGRYNWLSYRPGNNSQKHQSYSRAYIDFKRPED 67

Query: 416  VVEFAEFFDGRVFVNEKGAQFKCIVEYAPSQRVPKVSSKKDGREGTISKDPEYLEFLELL 595
            V++FAEFF+G +FVNEKG QFK IVEY+PSQRVPK  SKKDGREGTISKDPEYLEFLEL+
Sbjct: 68   VIDFAEFFNGHIFVNEKGTQFKAIVEYSPSQRVPKQWSKKDGREGTISKDPEYLEFLELI 127

Query: 596  AKPVENLPSAEIQLERREAERVGAAKETPIVTPLMDFVRQKRAAKSGSQRPTSNGKLSRK 775
            AKPVENLPSAEIQLERREAER GAAK+ PIVTPLMDFVRQKR AK+G +R  SNGKLSR+
Sbjct: 128  AKPVENLPSAEIQLERREAERAGAAKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKLSRR 187

Query: 776  ATGAAPGNSRSASTKRGLEKRKASTSMYVLRDSGKNASGKDKATYILVPRREDHQLPDKS 955
            A G+  G+  S+S KRG EK++ ST+MYVLRD+ K+ SGKDK+TY+ VP+R+D QL   +
Sbjct: 188  AGGS--GSPSSSSLKRGSEKKRISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQL-SNA 244

Query: 956  IAIAAIAGHEKINDNS 1003
            + + + +G   + D S
Sbjct: 245  VTLGSGSGTAVLEDES 260



 Score =  136 bits (343), Expect(2) = e-127
 Identities = 115/322 (35%), Positives = 152/322 (47%), Gaps = 13/322 (4%)
 Frame = +3

Query: 1062 EQGTTVASRVVSQQQTETSPAKNFPVSTSKVNQQREASARMIRSILSNKEARXXXXXXXX 1241
            E+  ++ +  +SQQQ+ +S  +N   ST+  +Q+RE S RMIRSIL NK++R        
Sbjct: 280  EKEISLVTGTMSQQQSISSSDRNIISSTALKSQRRETSGRMIRSILLNKDSRHIRSSGVH 339

Query: 1242 XXXXIESSDLE-DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXXDKVVGNVHHTA 1418
                +++S+LE +KR  R   A+   +D                     DKVVGN  H  
Sbjct: 340  SEPQMQTSNLEKEKRPPRPPHAQLGLKD---------------ANGTPDDKVVGNDLH-- 382

Query: 1419 GHISEKKEKRTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXXEEKTIAQ 1598
            G  +EK+EKRTRNKDRPDRG WTPLRRS+G +ASDE L                      
Sbjct: 383  GFPNEKQEKRTRNKDRPDRGVWTPLRRSDGSYASDESL---------------------- 420

Query: 1599 AVASSGVDVIEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVD 1778
                     +     ST+  F   +  + D                          VKVD
Sbjct: 421  ---------LSSASQSTQSVFDSSQGNHGD--------------------------VKVD 445

Query: 1779 VPNANRGGQIKSHGSSRNNFSSIENGG-RHF-RRGPSHGSKDVDNFMVPTEGKSSKRGGA 1952
              N  R G++K  GS R N SS++NG  +HF RRGPSH  +D D   V  E K+ KRGG+
Sbjct: 446  SLNL-RSGEVKVLGSGRGNHSSLDNGSHKHFGRRGPSHIVRDADGSTV--EAKTPKRGGS 502

Query: 1953 T---SHE-------KQVWVQKS 1988
            +   SHE       KQVWVQKS
Sbjct: 503  SGYGSHEVCSLDSQKQVWVQKS 524


>ref|XP_007041200.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
            gi|508705135|gb|EOX97031.1| Smg-4/UPF3 family protein,
            putative isoform 1 [Theobroma cacao]
          Length = 514

 Score =  374 bits (959), Expect(2) = e-126
 Identities = 188/262 (71%), Positives = 217/262 (82%)
 Frame = +2

Query: 221  MKDPLDRTKVVLRHLPPGISQSALLDQIDSRFSGRYRWFSFRPGKTSQSYQLYSRAYIDF 400
            MK  LDRTKV+LRHLPP I+++ L++Q+D+ FSGRY W SFRPGK+SQ +Q YSRAYIDF
Sbjct: 1    MKGALDRTKVILRHLPPAITEAMLVEQVDTAFSGRYNWLSFRPGKSSQKHQSYSRAYIDF 60

Query: 401  NGREDVVEFAEFFDGRVFVNEKGAQFKCIVEYAPSQRVPKVSSKKDGREGTISKDPEYLE 580
               EDV+EFAEFF+G VFVNEKG QFK IVEYAPSQRVPK SSKKDGREGTI KD EYLE
Sbjct: 61   KRSEDVLEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKRSSKKDGREGTILKDLEYLE 120

Query: 581  FLELLAKPVENLPSAEIQLERREAERVGAAKETPIVTPLMDFVRQKRAAKSGSQRPTSNG 760
            FLE L KPVENLPSAEIQLER+EAER G  K+TPIVTPLMDFVRQKRAAK GS+R  SNG
Sbjct: 121  FLECLGKPVENLPSAEIQLERKEAERAGVPKDTPIVTPLMDFVRQKRAAKGGSRRSLSNG 180

Query: 761  KLSRKATGAAPGNSRSASTKRGLEKRKASTSMYVLRDSGKNASGKDKATYILVPRREDHQ 940
            KLSR+A G++ G   SAS+KRG EKR+ ST+MYVLRDS KNASGKDK+TYILV +R++ Q
Sbjct: 181  KLSRRAGGSSGGTPSSASSKRGSEKRRGSTTMYVLRDSLKNASGKDKSTYILVSKRDEQQ 240

Query: 941  LPDKSIAIAAIAGHEKINDNSG 1006
            L DK +A+A+  G E   + SG
Sbjct: 241  LSDKHVALASSMGTEISEEESG 262



 Score =  106 bits (265), Expect(2) = e-126
 Identities = 106/308 (34%), Positives = 132/308 (42%), Gaps = 5/308 (1%)
 Frame = +3

Query: 1092 VSQQQTETSPAKNFPVST-SKVNQQREASARMIRSILSNKEARXXXXXXXXXXXXIESSD 1268
            V  QQ  TSP K    ST +K N +RE   RMIR IL NK+AR            I +S+
Sbjct: 291  VLHQQNVTSPIKTILGSTPTKQNSRREG--RMIRGILLNKDARQNQSSGVQSEQQIRTSN 348

Query: 1269 LE-DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXXDKVVGNVHHTAGHISEKKEK 1445
            LE D+R  R + +  + +D                     DKVVGN  H     SEK E+
Sbjct: 349  LEKDRRPPRHSHSHLVLKD---------------TNTASDDKVVGNDLHG----SEKPER 389

Query: 1446 RTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXXEEKTIAQAVASSGVDV 1625
            R RNKDRPDRG WT LRRS+G +ASDE +                  + A   A   +D 
Sbjct: 390  RCRNKDRPDRGVWT-LRRSDGSYASDESM-----------------SSSASQSALIPLDP 431

Query: 1626 IEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPNANRGGQ 1805
            +E     TK                                        VD+ N  R  Q
Sbjct: 432  LEGTYGDTK----------------------------------------VDLSNV-RSVQ 450

Query: 1806 IKSHGSSRNNFSSIENGGRHFRRGPSHGSKDVDNFMVPTEGKSSKRG---GATSHEKQVW 1976
            +K+ GS RN  SS++NG  +  +  S      D   V ++GK  KRG   G  SHEKQVW
Sbjct: 451  VKTVGSGRN--SSLDNGSHN--KHVSRRGAVADGSSVMSDGKPGKRGCAAGYGSHEKQVW 506

Query: 1977 VQKSGSGS 2000
            VQKS SGS
Sbjct: 507  VQKSSSGS 514


>ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
            sinensis]
          Length = 514

 Score =  358 bits (918), Expect(2) = e-123
 Identities = 180/262 (68%), Positives = 214/262 (81%)
 Frame = +2

Query: 221  MKDPLDRTKVVLRHLPPGISQSALLDQIDSRFSGRYRWFSFRPGKTSQSYQLYSRAYIDF 400
            MK PLDRTKVV+R+LPP I+Q A  +QID  F GRY W SFR GKTSQ +Q  +RAY+DF
Sbjct: 1    MKGPLDRTKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLDF 60

Query: 401  NGREDVVEFAEFFDGRVFVNEKGAQFKCIVEYAPSQRVPKVSSKKDGREGTISKDPEYLE 580
               EDV+EFAEFF+G VFVNEKG QFK IVEYAPSQRVPK  SKKDGREGT+ KDPEYLE
Sbjct: 61   KKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYLE 120

Query: 581  FLELLAKPVENLPSAEIQLERREAERVGAAKETPIVTPLMDFVRQKRAAKSGSQRPTSNG 760
            FLE ++KPVENLPSAEIQLERREAER GAAKE  IVTPLMDFVRQKRAAK+G +R  SNG
Sbjct: 121  FLEFISKPVENLPSAEIQLERREAERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSNG 180

Query: 761  KLSRKATGAAPGNSRSASTKRGLEKRKASTSMYVLRDSGKNASGKDKATYILVPRREDHQ 940
            KLSR+A+G++ G+  S S+KRG +K+KAST+MYVLRD+ KN+SGKDK+TYILVP+R+D  
Sbjct: 181  KLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDDQD 240

Query: 941  LPDKSIAIAAIAGHEKINDNSG 1006
              DK ++ ++  G E + + SG
Sbjct: 241  F-DKPVSSSSATGSEVVLEESG 261



 Score =  115 bits (287), Expect(2) = e-123
 Identities = 110/319 (34%), Positives = 145/319 (45%), Gaps = 6/319 (1%)
 Frame = +3

Query: 1062 EQGTTVASRVVSQQQTETSPAKNFPVSTS-KVNQQREASARMIRSILSNKEARXXXXXXX 1238
            E+  +  S  VS QQ+ +   KN   S + K NQ+RE S R+IR IL NK+AR       
Sbjct: 280  EREISQVSGSVSHQQSAS--VKNIISSPALKQNQRRENSGRIIRGILLNKDARQNQASGL 337

Query: 1239 XXXXXIESSDLEDKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXXDKVVGNVHHTA 1418
                 I + + +DKR  R +    + +D                     DKV+ N  H  
Sbjct: 338  HSEQQISNLE-KDKRPPRPSHVHLVMKD---------------TNGVSDDKVIVNDLH-- 379

Query: 1419 GHISEKKEKRTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXXEEKTIAQ 1598
               SEK+E+RTRNKDRPDR  WT LRRS+G + SDE L                  + A 
Sbjct: 380  ---SEKQERRTRNKDRPDRAAWT-LRRSDGSYQSDESL-----------------SSSAS 418

Query: 1599 AVASSGVDVIEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVD 1778
             ++ S VD  E                          +G G   LS              
Sbjct: 419  QLSLSAVDSSEG------------------------NLGDGKFDLSNM------------ 442

Query: 1779 VPNANRGGQIKSHGSSRNNFSSIENGG-RHF-RRGPSHGSKDVDNFMVPTEGKSSKRGGA 1952
                 R G++K+ G  R++ SS++NG  RH  RRGP+H  KD D+  V +EGK  +RGGA
Sbjct: 443  -----RSGEVKAVGGGRSSHSSVDNGSHRHIGRRGPTH-VKD-DSSPVMSEGKPLRRGGA 495

Query: 1953 T---SHEKQVWVQKSGSGS 2000
            +   SHEKQVWVQKS SGS
Sbjct: 496  SGYGSHEKQVWVQKSSSGS 514


>ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina]
            gi|557533707|gb|ESR44825.1| hypothetical protein
            CICLE_v10000901mg [Citrus clementina]
          Length = 514

 Score =  358 bits (918), Expect(2) = e-123
 Identities = 180/262 (68%), Positives = 214/262 (81%)
 Frame = +2

Query: 221  MKDPLDRTKVVLRHLPPGISQSALLDQIDSRFSGRYRWFSFRPGKTSQSYQLYSRAYIDF 400
            MK PLDRTKVV+R+LPP I+Q A  +QID  F GRY W SFR GKTSQ +Q  +RAY+DF
Sbjct: 1    MKGPLDRTKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLDF 60

Query: 401  NGREDVVEFAEFFDGRVFVNEKGAQFKCIVEYAPSQRVPKVSSKKDGREGTISKDPEYLE 580
               EDV+EFAEFF+G VFVNEKG QFK IVEYAPSQRVPK  SKKDGREGT+ KDPEYLE
Sbjct: 61   KKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYLE 120

Query: 581  FLELLAKPVENLPSAEIQLERREAERVGAAKETPIVTPLMDFVRQKRAAKSGSQRPTSNG 760
            FLE ++KPVENLPSAEIQLERREAER GAAKE  IVTPLMDFVRQKRAAK+G +R  SNG
Sbjct: 121  FLEFISKPVENLPSAEIQLERREAERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSNG 180

Query: 761  KLSRKATGAAPGNSRSASTKRGLEKRKASTSMYVLRDSGKNASGKDKATYILVPRREDHQ 940
            KLSR+A+G++ G+  S S+KRG +K+KAST+MYVLRD+ KN+SGKDK+TYILVP+R+D  
Sbjct: 181  KLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDDQD 240

Query: 941  LPDKSIAIAAIAGHEKINDNSG 1006
              DK ++ ++  G E + + SG
Sbjct: 241  F-DKPVSSSSATGSEVVLEESG 261



 Score =  113 bits (282), Expect(2) = e-123
 Identities = 107/316 (33%), Positives = 140/316 (44%), Gaps = 11/316 (3%)
 Frame = +3

Query: 1086 RVVSQQQTETSPAKNFPVSTS------KVNQQREASARMIRSILSNKEARXXXXXXXXXX 1247
            R +SQ     S  ++  V T       K NQ+RE S R+IR IL NK+AR          
Sbjct: 281  REISQVSGSVSHQQSASVKTIISSPALKQNQRRENSGRIIRGILLNKDARQNQASGLHSE 340

Query: 1248 XXIESSDLEDKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXXDKVVGNVHHTAGHI 1427
              I + + +DKR  R +  + + +D                     DKV+ N  H     
Sbjct: 341  QQISNLE-KDKRPPRPSHVQLVMKD---------------TNGVSDDKVIVNDLH----- 379

Query: 1428 SEKKEKRTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXXEEKTIAQAVA 1607
            SEK+E+RTRNKDRPDR  WT LRRS+G + SDE L                  + A  ++
Sbjct: 380  SEKQERRTRNKDRPDRAAWT-LRRSDGSYQSDESL-----------------SSSASQLS 421

Query: 1608 SSGVDVIEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPN 1787
             S VD  E                          +G G   LS                 
Sbjct: 422  LSAVDSSEG------------------------NLGDGKFDLSNM--------------- 442

Query: 1788 ANRGGQIKSHGSSRNNFSSIENGG-RHF-RRGPSHGSKDVDNFMVPTEGKSSKRGGAT-- 1955
              R G++K+ G  R++ SS++NG  RH  RRGP+H  KD D   V +EGK  +RGGA+  
Sbjct: 443  --RSGEVKAVGGGRSSHSSVDNGSHRHIGRRGPTH-VKD-DGSPVMSEGKPLRRGGASGY 498

Query: 1956 -SHEKQVWVQKSGSGS 2000
             SHEKQVWVQKS SGS
Sbjct: 499  GSHEKQVWVQKSSSGS 514


>ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Populus trichocarpa]
           gi|550312328|gb|ERP48419.1| hypothetical protein
           POPTR_0022s00460g [Populus trichocarpa]
          Length = 511

 Score =  330 bits (845), Expect(2) = e-120
 Identities = 166/250 (66%), Positives = 202/250 (80%)
 Frame = +2

Query: 236 DRTKVVLRHLPPGISQSALLDQIDSRFSGRYRWFSFRPGKTSQSYQLYSRAYIDFNGRED 415
           D+TKVV+RHLPPG+SQ   ++QID  FSGRY W S+RPGK+SQ +Q  SRAYIDF   +D
Sbjct: 7   DKTKVVVRHLPPGVSQPMFVEQIDLAFSGRYNWLSYRPGKSSQKHQSCSRAYIDFKRPDD 66

Query: 416 VVEFAEFFDGRVFVNEKGAQFKCIVEYAPSQRVPKVSSKKDGREGTISKDPEYLEFLELL 595
           V++FAEFF+G +FVNEKG QFK IVEYAPSQ VPK  SKKDGREGTI KDPEYLEFLE +
Sbjct: 67  VIDFAEFFNGHLFVNEKGTQFKAIVEYAPSQHVPKQWSKKDGREGTILKDPEYLEFLEFI 126

Query: 596 AKPVENLPSAEIQLERREAERVGAAKETPIVTPLMDFVRQKRAAKSGSQRPTSNGKLSRK 775
           AKPVENLPSAEIQLERREAER G AK+ PIVTPLM+F+RQKRAAKSG +R  SNGK SR+
Sbjct: 127 AKPVENLPSAEIQLERREAERAGVAKDAPIVTPLMEFIRQKRAAKSGPRRILSNGKPSRR 186

Query: 776 ATGAAPGNSRSASTKRGLEKRKASTSMYVLRDSGKNASGKDKATYILVPRREDHQLPDKS 955
           A G+  G+  S+S+KRG EK++AST+MYVLRD+ K  SGK+K+ Y  VP+ +D QL  K+
Sbjct: 187 AGGS--GSPSSSSSKRGSEKKRASTTMYVLRDTVKGTSGKEKSIYAQVPKLDDRQL-SKA 243

Query: 956 IAIAAIAGHE 985
           + + + +G E
Sbjct: 244 VTLGSGSGTE 253



 Score =  131 bits (329), Expect(2) = e-120
 Identities = 111/309 (35%), Positives = 145/309 (46%), Gaps = 6/309 (1%)
 Frame = +3

Query: 1092 VSQQQTETSPAKNFPVSTSKVNQQREASARMIRSILSNKEARXXXXXXXXXXXXIESSDL 1271
            +S QQ+ +   +N   ST+  +Q+ E+S R+I+SIL NK++R            +++S+L
Sbjct: 282  ISLQQSISPSDRNIISSTALKSQRHESSGRVIKSILLNKDSRRIQSSGVQSEPQMQTSNL 341

Query: 1272 E-DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXXDKVVGNVHHTAGHISEKKEKR 1448
            E DKR  R   A  +   +                    DKVVGN  H  G  +EK+E+R
Sbjct: 342  EKDKRPPRPPHALVLKDAN----------------GTPDDKVVGNDLH--GFPNEKQERR 383

Query: 1449 TRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXXEEKTIAQAVASSGVDVI 1628
            TRNKDRPDR  WT LRRSEG +ASDE L                  + A     SG D  
Sbjct: 384  TRNKDRPDRVVWT-LRRSEGSYASDESL-----------------SSSAYLSTQSGFD-- 423

Query: 1629 EDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPNANRGGQI 1808
                                     +Q+  G              +VK D  N  R G++
Sbjct: 424  ------------------------SSQVNHG--------------DVKADTLNL-RSGEV 444

Query: 1809 KSHGSSRNNFSSIENGGRHF--RRGPSHGSKDVDNFMVPTEGKSSKRGGAT---SHEKQV 1973
            K+ GS R+N SS++NG      RRGP H  +D D   V  EGKS KRGGA+   SHEKQV
Sbjct: 445  KALGSGRSNHSSLDNGSHKHSGRRGPPHPVRDADGSTV--EGKSLKRGGASGYGSHEKQV 502

Query: 1974 WVQKSGSGS 2000
            WVQKS SGS
Sbjct: 503  WVQKSSSGS 511


>ref|XP_007041201.1| Smg-4/UPF3 family protein, putative isoform 2, partial [Theobroma
            cacao] gi|508705136|gb|EOX97032.1| Smg-4/UPF3 family
            protein, putative isoform 2, partial [Theobroma cacao]
          Length = 440

 Score =  367 bits (941), Expect(2) = e-116
 Identities = 188/269 (69%), Positives = 217/269 (80%), Gaps = 7/269 (2%)
 Frame = +2

Query: 221  MKDPLDRTKVVLRHLPPGISQSALLDQIDSRFSGRYRWFSFRPGKTSQSYQLYSRAYIDF 400
            MK  LDRTKV+LRHLPP I+++ L++Q+D+ FSGRY W SFRPGK+SQ +Q YSRAYIDF
Sbjct: 1    MKGALDRTKVILRHLPPAITEAMLVEQVDTAFSGRYNWLSFRPGKSSQKHQSYSRAYIDF 60

Query: 401  NGREDVVEFAEFFDGRVFVNEKGAQFKCIVEYAPSQRVPKVSSKKDGREGTISK------ 562
               EDV+EFAEFF+G VFVNEKG QFK IVEYAPSQRVPK SSKKDGREGTI K      
Sbjct: 61   KRSEDVLEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKRSSKKDGREGTILKVFLDEH 120

Query: 563  -DPEYLEFLELLAKPVENLPSAEIQLERREAERVGAAKETPIVTPLMDFVRQKRAAKSGS 739
             D EYLEFLE L KPVENLPSAEIQLER+EAER G  K+TPIVTPLMDFVRQKRAAK GS
Sbjct: 121  LDLEYLEFLECLGKPVENLPSAEIQLERKEAERAGVPKDTPIVTPLMDFVRQKRAAKGGS 180

Query: 740  QRPTSNGKLSRKATGAAPGNSRSASTKRGLEKRKASTSMYVLRDSGKNASGKDKATYILV 919
            +R  SNGKLSR+A G++ G   SAS+KRG EKR+ ST+MYVLRDS KNASGKDK+TYILV
Sbjct: 181  RRSLSNGKLSRRAGGSSGGTPSSASSKRGSEKRRGSTTMYVLRDSLKNASGKDKSTYILV 240

Query: 920  PRREDHQLPDKSIAIAAIAGHEKINDNSG 1006
             +R++ QL DK +A+A+  G E   + SG
Sbjct: 241  SKRDEQQLSDKHVALASSMGTEISEEESG 269



 Score = 81.6 bits (200), Expect(2) = e-116
 Identities = 63/149 (42%), Positives = 77/149 (51%), Gaps = 2/149 (1%)
 Frame = +3

Query: 1092 VSQQQTETSPAKNFPVST-SKVNQQREASARMIRSILSNKEARXXXXXXXXXXXXIESSD 1268
            V  QQ  TSP K    ST +K N +RE   RMIR IL NK+AR            I +S+
Sbjct: 298  VLHQQNVTSPIKTILGSTPTKQNSRREG--RMIRGILLNKDARQNQSSGVQSEQQIRTSN 355

Query: 1269 LE-DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXXDKVVGNVHHTAGHISEKKEK 1445
            LE D+R  R + +  + +D                     DKVVGN  H     SEK E+
Sbjct: 356  LEKDRRPPRHSHSHLVLKD---------------TNTASDDKVVGNDLHG----SEKPER 396

Query: 1446 RTRNKDRPDRGFWTPLRRSEGLHASDECL 1532
            R RNKDRPDRG WT LRRS+G +ASDE +
Sbjct: 397  RCRNKDRPDRGVWT-LRRSDGSYASDESM 424


>gb|EYU26454.1| hypothetical protein MIMGU_mgv1a004529mg [Mimulus guttatus]
          Length = 521

 Score =  337 bits (864), Expect(2) = e-116
 Identities = 165/264 (62%), Positives = 203/264 (76%)
 Frame = +2

Query: 221  MKDPLDRTKVVLRHLPPGISQSALLDQIDSRFSGRYRWFSFRPGKTSQSYQLYSRAYIDF 400
            MK  +DRTKVVLRHLPP ISQS L++ +DSRFSGRY W +FRPGK+S    +YSRAYIDF
Sbjct: 1    MKGSIDRTKVVLRHLPPTISQSNLVEHVDSRFSGRYGWLAFRPGKSSPRQPIYSRAYIDF 60

Query: 401  NGREDVVEFAEFFDGRVFVNEKGAQFKCIVEYAPSQRVPKVSSKKDGREGTISKDPEYLE 580
            N  EDV+EFAEFF+G +FVNEKG QFK IVEYAPSQRVPK  SKKDGR+GT+ KDPEYLE
Sbjct: 61   NTPEDVIEFAEFFNGHIFVNEKGTQFKAIVEYAPSQRVPKQWSKKDGRDGTLLKDPEYLE 120

Query: 581  FLELLAKPVENLPSAEIQLERREAERVGAAKETPIVTPLMDFVRQKRAAKSGSQRPTSNG 760
            FLE +AKPV NLPSAEIQLER+EAER GA K  P+VTPLMD++RQKRAAK G++R   NG
Sbjct: 121  FLEFIAKPVVNLPSAEIQLERKEAERAGAPKNVPVVTPLMDYIRQKRAAKGGARRTVLNG 180

Query: 761  KLSRKATGAAPGNSRSASTKRGLEKRKASTSMYVLRDSGKNASGKDKATYILVPRREDHQ 940
            K +R+  G    N  S S++RG EKR+ +T+MYVLRD+ K  + K+ + Y L+ +++D Q
Sbjct: 181  KPARRVGGTPSRNLVSGSSRRGSEKRRTNTTMYVLRDNSKIVTSKENSAYSLISKQDDQQ 240

Query: 941  LPDKSIAIAAIAGHEKINDNSGRS 1012
            L DKS    A++G+E +    G S
Sbjct: 241  LVDKSFNSTAVSGNEALEGERGGS 264



 Score =  110 bits (276), Expect(2) = e-116
 Identities = 97/305 (31%), Positives = 136/305 (44%), Gaps = 6/305 (1%)
 Frame = +3

Query: 1104 QTETSPAKNFPVS-TSKVNQQREASARMIRSILSNKEARXXXXXXXXXXXXIESSDLEDK 1280
            Q   +P+K   +S +SK N +R+AS R+IRSIL N++                 + L+DK
Sbjct: 294  QNAETPSKTSHISASSKQNPRRDASGRIIRSILLNRDTSQGQPLTGTQSELRVQNPLQDK 353

Query: 1281 --RTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXXDKVVGNVHHTAGHISEKKEKRTR 1454
              R  R  + + + +D                      K+V N  +     +EK+E+RT+
Sbjct: 354  DKRPPRPPSMQLLQKD---------------TNGASEGKIVHNDLYAVP--TEKQERRTK 396

Query: 1455 NKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXXEEKTIAQAVASSGVDVIED 1634
            NKDRPDRG W PLRRS+G HASD+ L                        +SSG    + 
Sbjct: 397  NKDRPDRGVWAPLRRSDGSHASDDSL------------------------SSSGSQTSQV 432

Query: 1635 MDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPNANRGGQIKS 1814
            +D +                  GT++ R                 K D+P A RGG  +S
Sbjct: 433  VDPA-----------------EGTRVER-----------------KHDMPVA-RGGDYRS 457

Query: 1815 HGSSRNNFSSIENGGRHFRRGPSHGSKDVDNFMVPTEGKSSKRGGAT---SHEKQVWVQK 1985
             GS R N  S +NG    RRG ++  KD D +    EGK  K+ GA+    +EK+VWVQK
Sbjct: 458  TGSGRGNNYSADNGSYRGRRGSAYIVKDADGYST-VEGKPLKKVGASVYGPNEKRVWVQK 516

Query: 1986 SGSGS 2000
            SGSGS
Sbjct: 517  SGSGS 521


>gb|EYU26453.1| hypothetical protein MIMGU_mgv1a004529mg [Mimulus guttatus]
          Length = 522

 Score =  334 bits (856), Expect(2) = e-115
 Identities = 166/265 (62%), Positives = 203/265 (76%), Gaps = 1/265 (0%)
 Frame = +2

Query: 221  MKDPLDRTKVVLRHLPPGISQSALLDQIDSRFSGRYRWFSFRPGKTSQSYQLYSRAYIDF 400
            MK  +DRTKVVLRHLPP ISQS L++ +DSRFSGRY W +FRPGK+S    +YSRAYIDF
Sbjct: 1    MKGSIDRTKVVLRHLPPTISQSNLVEHVDSRFSGRYGWLAFRPGKSSPRQPIYSRAYIDF 60

Query: 401  NGREDVVEFAEFFDGRVFVNEKGAQFKCIVEYAPSQRVPKVSSKKDGREGTISKDPEYLE 580
            N  EDV+EFAEFF+G +FVNEKG QFK IVEYAPSQRVPK  SKKDGR+GT+ KDPEYLE
Sbjct: 61   NTPEDVIEFAEFFNGHIFVNEKGTQFKAIVEYAPSQRVPKQWSKKDGRDGTLLKDPEYLE 120

Query: 581  FLELLAKPVENLPSAEIQLERREAERVGAAKETPIVTPLMDFVRQKRAAKSGS-QRPTSN 757
            FLE +AKPV NLPSAEIQLER+EAER GA K  P+VTPLMD++RQKRAAK G+ QR   N
Sbjct: 121  FLEFIAKPVVNLPSAEIQLERKEAERAGAPKNVPVVTPLMDYIRQKRAAKGGARQRTVLN 180

Query: 758  GKLSRKATGAAPGNSRSASTKRGLEKRKASTSMYVLRDSGKNASGKDKATYILVPRREDH 937
            GK +R+  G    N  S S++RG EKR+ +T+MYVLRD+ K  + K+ + Y L+ +++D 
Sbjct: 181  GKPARRVGGTPSRNLVSGSSRRGSEKRRTNTTMYVLRDNSKIVTSKENSAYSLISKQDDQ 240

Query: 938  QLPDKSIAIAAIAGHEKINDNSGRS 1012
            QL DKS    A++G+E +    G S
Sbjct: 241  QLVDKSFNSTAVSGNEALEGERGGS 265



 Score =  110 bits (276), Expect(2) = e-115
 Identities = 97/305 (31%), Positives = 136/305 (44%), Gaps = 6/305 (1%)
 Frame = +3

Query: 1104 QTETSPAKNFPVS-TSKVNQQREASARMIRSILSNKEARXXXXXXXXXXXXIESSDLEDK 1280
            Q   +P+K   +S +SK N +R+AS R+IRSIL N++                 + L+DK
Sbjct: 295  QNAETPSKTSHISASSKQNPRRDASGRIIRSILLNRDTSQGQPLTGTQSELRVQNPLQDK 354

Query: 1281 --RTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXXDKVVGNVHHTAGHISEKKEKRTR 1454
              R  R  + + + +D                      K+V N  +     +EK+E+RT+
Sbjct: 355  DKRPPRPPSMQLLQKD---------------TNGASEGKIVHNDLYAVP--TEKQERRTK 397

Query: 1455 NKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXXEEKTIAQAVASSGVDVIED 1634
            NKDRPDRG W PLRRS+G HASD+ L                        +SSG    + 
Sbjct: 398  NKDRPDRGVWAPLRRSDGSHASDDSL------------------------SSSGSQTSQV 433

Query: 1635 MDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPNANRGGQIKS 1814
            +D +                  GT++ R                 K D+P A RGG  +S
Sbjct: 434  VDPA-----------------EGTRVER-----------------KHDMPVA-RGGDYRS 458

Query: 1815 HGSSRNNFSSIENGGRHFRRGPSHGSKDVDNFMVPTEGKSSKRGGAT---SHEKQVWVQK 1985
             GS R N  S +NG    RRG ++  KD D +    EGK  K+ GA+    +EK+VWVQK
Sbjct: 459  TGSGRGNNYSADNGSYRGRRGSAYIVKDADGYST-VEGKPLKKVGASVYGPNEKRVWVQK 517

Query: 1986 SGSGS 2000
            SGSGS
Sbjct: 518  SGSGS 522


>ref|XP_004485448.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Cicer arietinum] gi|502076758|ref|XP_004485449.1|
            PREDICTED: regulator of nonsense transcripts UPF3-like
            isoform X3 [Cicer arietinum]
            gi|502076762|ref|XP_004485450.1| PREDICTED: regulator of
            nonsense transcripts UPF3-like isoform X4 [Cicer
            arietinum]
          Length = 510

 Score =  330 bits (845), Expect(2) = e-112
 Identities = 169/255 (66%), Positives = 201/255 (78%)
 Frame = +2

Query: 236  DRTKVVLRHLPPGISQSALLDQIDSRFSGRYRWFSFRPGKTSQSYQLYSRAYIDFNGRED 415
            DRTKVV+RHLPP IS+ +L   ID  FSGRY W SFRP K S  +  +SRAYIDFN  ED
Sbjct: 3    DRTKVVVRHLPPTISEDSLSSLIDGSFSGRYNWLSFRPAKISPKHTSFSRAYIDFNKPED 62

Query: 416  VVEFAEFFDGRVFVNEKGAQFKCIVEYAPSQRVPKVSSKKDGREGTISKDPEYLEFLELL 595
            V+EFAEFF+G VFVNEKG QFK  VEYAPSQRVPK  SKKDGR+GTI KDPEYLEFLELL
Sbjct: 63   VIEFAEFFNGHVFVNEKGTQFKVTVEYAPSQRVPKQWSKKDGRDGTIYKDPEYLEFLELL 122

Query: 596  AKPVENLPSAEIQLERREAERVGAAKETPIVTPLMDFVRQKRAAKSGSQRPTSNGKLSRK 775
            AKPVENLPSAEIQLE+REAER GA K+ PIVTPLMDFVRQKRAAK G +R +SNGK++R+
Sbjct: 123  AKPVENLPSAEIQLEKREAERSGAGKDVPIVTPLMDFVRQKRAAK-GPRRLSSNGKVTRR 181

Query: 776  ATGAAPGNSRSASTKRGLEKRKASTSMYVLRDSGKNASGKDKATYILVPRREDHQLPDKS 955
                + G+S SA ++RG  +++ ST+MYV RD GKN++ KDK+TYILVPR+ D  L +KS
Sbjct: 182  TGTPSNGSSSSAPSRRGSARKRVSTTMYVARDPGKNSTVKDKSTYILVPRQGDQHLSNKS 241

Query: 956  IAIAAIAGHEKINDN 1000
              IA+  G+   ++N
Sbjct: 242  SNIASSDGNPTFDEN 256



 Score =  105 bits (262), Expect(2) = e-112
 Identities = 101/316 (31%), Positives = 141/316 (44%), Gaps = 6/316 (1%)
 Frame = +3

Query: 1071 TTVASRVVSQQQTETSPAKNFPVSTS-KVNQQREASARMIRSILSNKEARXXXXXXXXXX 1247
            T   S  +SQ  + TS AK    ST+ K NQ+ E S R+I+SILSNK+ R          
Sbjct: 280  TASDSDSMSQHHSITSSAKTILNSTALKQNQRHEGSGRIIKSILSNKDLRQNQSSRAYSE 339

Query: 1248 XXIESSDLE-DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXXDKVVGNVHHTAGH 1424
              +++S+LE +K+ TR    + I +                      +++  +  H +  
Sbjct: 340  RQLQTSNLEKEKQPTRPLHVQLILKG---------------TDGAPENRITVHGLHVS-- 382

Query: 1425 ISEKKEKRTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXXEEKTIAQAV 1604
             SE++E+R R KDRPDRG WT   RS G    DE L                      + 
Sbjct: 383  -SERQERRFRQKDRPDRGIWT--SRSNG---GDESL---------------------SSS 415

Query: 1605 ASSGVDVIEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVP 1784
            ASS VD +E                             GG           H E+K D  
Sbjct: 416  ASSQVDPLE-----------------------------GG-----------HAELKHDTR 435

Query: 1785 NANRGGQIKSHGSSRNNFSSIENGGRHF-RRGPSHGSKDVDNFMVPTEGKSSKRGGAT-- 1955
            +A R G++KS GS R + SS     +HF RRGP HG KDVD + V +EGK  ++  ++  
Sbjct: 436  SA-RSGEVKSFGSLRASHSSENGFNKHFGRRGPIHGVKDVDGYSVSSEGKHPRKPSSSAY 494

Query: 1956 -SHEKQVWVQKSGSGS 2000
             S+EKQVWVQK+ SG+
Sbjct: 495  GSNEKQVWVQKASSGT 510


>ref|XP_007148572.1| hypothetical protein PHAVU_006G219800g [Phaseolus vulgaris]
            gi|593696149|ref|XP_007148573.1| hypothetical protein
            PHAVU_006G219800g [Phaseolus vulgaris]
            gi|561021795|gb|ESW20566.1| hypothetical protein
            PHAVU_006G219800g [Phaseolus vulgaris]
            gi|561021796|gb|ESW20567.1| hypothetical protein
            PHAVU_006G219800g [Phaseolus vulgaris]
          Length = 513

 Score =  324 bits (830), Expect(2) = e-111
 Identities = 169/266 (63%), Positives = 208/266 (78%), Gaps = 2/266 (0%)
 Frame = +2

Query: 221  MKDPLDRTKVVLRHLPPGISQSALLDQIDSRFSGRYRWFSFRPGKTSQSYQLYSRAYIDF 400
            MK  LDRTKVVLRHLPP +S++ALL QIDS F+ RY W SFRP K SQ +  YSRAYIDF
Sbjct: 1    MKGSLDRTKVVLRHLPPSLSEAALLAQIDSAFADRYNWLSFRPAKVSQKHISYSRAYIDF 60

Query: 401  NGREDVVEFAEFFDGRVFVNEKGAQFKCIVEYAPSQRVPKVSSKKDGREGTISKDPEYLE 580
               +DV+ FAEFF+G VFVNEKG+QFK IVEYAPSQRVP+  SKKDGR+GTI KD EYLE
Sbjct: 61   KRPDDVILFAEFFNGHVFVNEKGSQFKVIVEYAPSQRVPRQWSKKDGRDGTIYKDSEYLE 120

Query: 581  FLELLAKPVENLPSAEIQLERREAERVGAAKETPIVTPLMDFVRQKRAAKSGSQRPTSNG 760
            FLELLAKPVENLPSAEIQLE+REAER GAAK+TPI+TPLMDFVRQKRAAK G +R  SNG
Sbjct: 121  FLELLAKPVENLPSAEIQLEKREAERSGAAKDTPIITPLMDFVRQKRAAK-GPRRSLSNG 179

Query: 761  KLSRKATGAAPGNSRSASTKRGLEKRKASTSMYVLRDSGKNASGKDKATYILVPRREDHQ 940
            K+SR+ T ++ G+  S +++RG  K++ S +MYV R  GKN++ KD++ Y LVP + D  
Sbjct: 180  KVSRRGT-SSNGSPSSGTSRRGSGKKRVSATMYVARHPGKNSTMKDRSIYTLVPSQGDQH 238

Query: 941  LPDKSIAIAAIAGHEKINDN--SGRS 1012
            + +KS  +A+  G + +++N  SG S
Sbjct: 239  ISNKSSNVASSDGKQTLDENGFSGNS 264



 Score =  108 bits (270), Expect(2) = e-111
 Identities = 97/310 (31%), Positives = 134/310 (43%), Gaps = 7/310 (2%)
 Frame = +3

Query: 1092 VSQQQTETSPAKNFPVSTS-KVNQQREASARMIRSILSNKEARXXXXXXXXXXXXIESSD 1268
            +SQ     S AK    +T  K NQ++E S R+IRSILS KE R            I++S+
Sbjct: 290  MSQHHNVISSAKEIVGATVLKQNQRQEGSGRIIRSILSKKELRQSQSSRALSEQQIQTSN 349

Query: 1269 LE-DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXXDKVVGNVHHTAGHI-SEKKE 1442
            LE DK++ R    + I +                      D  +G +     H+ SE++E
Sbjct: 350  LEKDKQSPRPIQVQLILKG----------------MNGTPDNKIGVLD---SHVFSERQE 390

Query: 1443 KRTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXXEEKTIAQAVASSGVD 1622
            +  R+KDRPDRG WT        + +DE  P                     + A S VD
Sbjct: 391  RHIRHKDRPDRGVWTSCS-----NGADESFP---------------------SAAFSQVD 424

Query: 1623 VIEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPNANRGG 1802
             +E                                         SH ++K D+PN  R G
Sbjct: 425  PLEG----------------------------------------SHADLKHDMPNT-RSG 443

Query: 1803 QIKSHGSSRNNFSSIENGGRHF-RRGPSHGSKDVDNFMVPTEGKSSKRGGAT---SHEKQ 1970
            ++KS G  R + SS     +HF RRGP+HG KDVD + V +EGK  +R G T   S+EKQ
Sbjct: 444  EVKSLGGVRTSHSSENGFNKHFGRRGPTHGVKDVDGYSVSSEGKHPRRSGTTAYGSNEKQ 503

Query: 1971 VWVQKSGSGS 2000
            VWVQK+ SG+
Sbjct: 504  VWVQKASSGT 513


>ref|XP_007221816.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica]
            gi|462418752|gb|EMJ23015.1| hypothetical protein
            PRUPE_ppa004923mg [Prunus persica]
          Length = 485

 Score =  356 bits (914), Expect(2) = e-111
 Identities = 180/273 (65%), Positives = 215/273 (78%)
 Frame = +2

Query: 218  LMKDPLDRTKVVLRHLPPGISQSALLDQIDSRFSGRYRWFSFRPGKTSQSYQLYSRAYID 397
            ++KD LDRTKVVLRHLPP ISQ++L++QID  FSGRY W +FRPGK SQ    YSRAYID
Sbjct: 1    MLKDQLDRTKVVLRHLPPSISQTSLVEQIDVFFSGRYNWVAFRPGKRSQKNPSYSRAYID 60

Query: 398  FNGREDVVEFAEFFDGRVFVNEKGAQFKCIVEYAPSQRVPKVSSKKDGREGTISKDPEYL 577
                EDV+EFAEFFDG +FVNEKG+QFK IVEYAPSQRVPK  SKKDGREGTI +DPEYL
Sbjct: 61   LKRPEDVIEFAEFFDGHLFVNEKGSQFKVIVEYAPSQRVPKQWSKKDGREGTIFRDPEYL 120

Query: 578  EFLELLAKPVENLPSAEIQLERREAERVGAAKETPIVTPLMDFVRQKRAAKSGSQRPTSN 757
            EFLE LAKP ENLPSAEIQLERREAER GA K+ PIVTPLMDFVRQKRA+K+GS+R  +N
Sbjct: 121  EFLEFLAKPAENLPSAEIQLERREAERSGAGKDAPIVTPLMDFVRQKRASKAGSRRSLTN 180

Query: 758  GKLSRKATGAAPGNSRSASTKRGLEKRKASTSMYVLRDSGKNASGKDKATYILVPRREDH 937
            GK SR+A G +  +   A++KRG E+++ S +MYVLRD+ KN S KDK+TYILVP+R+D 
Sbjct: 181  GKTSRRAGGPSSRSPSLATSKRGSERKRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQ 240

Query: 938  QLPDKSIAIAAIAGHEKINDNSGRSRGCCYWKK 1036
            Q  +KS+ +A+ AG   + + SG S      KK
Sbjct: 241  QPSEKSVTLASAAGTHVLEEESGVSGADAVKKK 273



 Score = 73.9 bits (180), Expect(2) = e-111
 Identities = 54/148 (36%), Positives = 75/148 (50%), Gaps = 2/148 (1%)
 Frame = +3

Query: 1095 SQQQTETSPAKNFPVSTS-KVNQQREASARMIRSILSNKEARXXXXXXXXXXXXIESSDL 1271
            +  Q ++S AKN   + + K N +R+ + R+IR IL NK+AR            I++S+ 
Sbjct: 290  NMSQQQSSSAKNMGGTIALKQNLRRQENGRIIRGILLNKDARQSQSSGIYSAQQIQTSNS 349

Query: 1272 E-DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXXDKVVGNVHHTAGHISEKKEKR 1448
            + DKR  R+   + I +D                       +VGN  H  G  SEK+EKR
Sbjct: 350  DRDKRPPRSQHVQLILKD---------------TNGAPDYNIVGNDLH--GICSEKQEKR 392

Query: 1449 TRNKDRPDRGFWTPLRRSEGLHASDECL 1532
             RNK+RPDR  WTPL R +G  ASDE L
Sbjct: 393  IRNKERPDRVVWTPLNRLDGSSASDESL 420



 Score = 59.3 bits (142), Expect = 6e-06
 Identities = 31/46 (67%), Positives = 33/46 (71%)
 Frame = +3

Query: 1863 HFRRGPSHGSKDVDNFMVPTEGKSSKRGGATSHEKQVWVQKSGSGS 2000
            H RRG +HG KD+D   V  EGK SKRG   SHEKQVWVQKS SGS
Sbjct: 441  HGRRGTTHGVKDLDGSPVAGEGKHSKRGYG-SHEKQVWVQKSSSGS 485


>ref|XP_007221815.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica]
            gi|462418751|gb|EMJ23014.1| hypothetical protein
            PRUPE_ppa004923mg [Prunus persica]
          Length = 482

 Score =  356 bits (914), Expect(2) = e-111
 Identities = 180/273 (65%), Positives = 215/273 (78%)
 Frame = +2

Query: 218  LMKDPLDRTKVVLRHLPPGISQSALLDQIDSRFSGRYRWFSFRPGKTSQSYQLYSRAYID 397
            ++KD LDRTKVVLRHLPP ISQ++L++QID  FSGRY W +FRPGK SQ    YSRAYID
Sbjct: 1    MLKDQLDRTKVVLRHLPPSISQTSLVEQIDVFFSGRYNWVAFRPGKRSQKNPSYSRAYID 60

Query: 398  FNGREDVVEFAEFFDGRVFVNEKGAQFKCIVEYAPSQRVPKVSSKKDGREGTISKDPEYL 577
                EDV+EFAEFFDG +FVNEKG+QFK IVEYAPSQRVPK  SKKDGREGTI +DPEYL
Sbjct: 61   LKRPEDVIEFAEFFDGHLFVNEKGSQFKVIVEYAPSQRVPKQWSKKDGREGTIFRDPEYL 120

Query: 578  EFLELLAKPVENLPSAEIQLERREAERVGAAKETPIVTPLMDFVRQKRAAKSGSQRPTSN 757
            EFLE LAKP ENLPSAEIQLERREAER GA K+ PIVTPLMDFVRQKRA+K+GS+R  +N
Sbjct: 121  EFLEFLAKPAENLPSAEIQLERREAERSGAGKDAPIVTPLMDFVRQKRASKAGSRRSLTN 180

Query: 758  GKLSRKATGAAPGNSRSASTKRGLEKRKASTSMYVLRDSGKNASGKDKATYILVPRREDH 937
            GK SR+A G +  +   A++KRG E+++ S +MYVLRD+ KN S KDK+TYILVP+R+D 
Sbjct: 181  GKTSRRAGGPSSRSPSLATSKRGSERKRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQ 240

Query: 938  QLPDKSIAIAAIAGHEKINDNSGRSRGCCYWKK 1036
            Q  +KS+ +A+ AG   + + SG S      KK
Sbjct: 241  QPSEKSVTLASAAGTHVLEEESGVSGADAVKKK 273



 Score = 73.9 bits (180), Expect(2) = e-111
 Identities = 54/148 (36%), Positives = 75/148 (50%), Gaps = 2/148 (1%)
 Frame = +3

Query: 1095 SQQQTETSPAKNFPVSTS-KVNQQREASARMIRSILSNKEARXXXXXXXXXXXXIESSDL 1271
            +  Q ++S AKN   + + K N +R+ + R+IR IL NK+AR            I++S+ 
Sbjct: 290  NMSQQQSSSAKNMGGTIALKQNLRRQENGRIIRGILLNKDARQSQSSGIYSAQQIQTSNS 349

Query: 1272 E-DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXXDKVVGNVHHTAGHISEKKEKR 1448
            + DKR  R+   + I +D                       +VGN  H  G  SEK+EKR
Sbjct: 350  DRDKRPPRSQHVQLILKD---------------TNGAPDYNIVGNDLH--GICSEKQEKR 392

Query: 1449 TRNKDRPDRGFWTPLRRSEGLHASDECL 1532
             RNK+RPDR  WTPL R +G  ASDE L
Sbjct: 393  IRNKERPDRVVWTPLNRLDGSSASDESL 420


>ref|XP_006592654.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Glycine max] gi|571493781|ref|XP_006592655.1| PREDICTED:
            regulator of nonsense transcripts UPF3-like isoform X2
            [Glycine max]
          Length = 514

 Score =  335 bits (859), Expect(2) = e-110
 Identities = 169/260 (65%), Positives = 211/260 (81%)
 Frame = +2

Query: 221  MKDPLDRTKVVLRHLPPGISQSALLDQIDSRFSGRYRWFSFRPGKTSQSYQLYSRAYIDF 400
            MK  LDRTKVVLRHLPP IS++ALL QID+ F+GRY W SFRPGK SQ +  +SRAYIDF
Sbjct: 1    MKGALDRTKVVLRHLPPSISEAALLSQIDAAFAGRYNWLSFRPGKISQKHMSFSRAYIDF 60

Query: 401  NGREDVVEFAEFFDGRVFVNEKGAQFKCIVEYAPSQRVPKVSSKKDGREGTISKDPEYLE 580
               EDV+ FAEFF+G VFVN KG+QFK IVEYAPSQRVP+  SKKD R+GTI KD EYLE
Sbjct: 61   KRPEDVILFAEFFNGHVFVNVKGSQFKVIVEYAPSQRVPRQWSKKDLRDGTIYKDSEYLE 120

Query: 581  FLELLAKPVENLPSAEIQLERREAERVGAAKETPIVTPLMDFVRQKRAAKSGSQRPTSNG 760
            FLELLAKPVENLPSAEIQLE+REAER GAAK+ PI+TPLMDFVRQKRAAK G +RP SNG
Sbjct: 121  FLELLAKPVENLPSAEIQLEKREAERSGAAKDIPIITPLMDFVRQKRAAK-GPRRPLSNG 179

Query: 761  KLSRKATGAAPGNSRSASTKRGLEKRKASTSMYVLRDSGKNASGKDKATYILVPRREDHQ 940
            K+SR+A  ++ G   SA+++RG  K++ S +MYV RD GK+++ KDK++Y LVP+++D  
Sbjct: 180  KVSRRAGTSSNGGPSSATSRRGSGKKRVSATMYVARDPGKSSTIKDKSSYTLVPKQDDQH 239

Query: 941  LPDKSIAIAAIAGHEKINDN 1000
            LP+K+  +A+  G++ +++N
Sbjct: 240  LPNKASNMASSDGNQTLDEN 259



 Score = 94.4 bits (233), Expect(2) = e-110
 Identities = 98/309 (31%), Positives = 131/309 (42%), Gaps = 6/309 (1%)
 Frame = +3

Query: 1092 VSQQQTETSPAKNFPVSTS-KVNQQREASARMIRSILSNKEARXXXXXXXXXXXXIESSD 1268
            +SQ    TS AK    ST  K +Q+ E S R+IRSILS KE              I +S+
Sbjct: 291  MSQHHNVTSSAKTVVGSTVLKQSQRHEGSGRIIRSILSKKELHQSQSSRALSEQKILTSN 350

Query: 1269 LE-DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXXDKVVGNVHHTAGHISEKKEK 1445
            LE +K+  R    + I +                      +K+  +  H +   SE++E+
Sbjct: 351  LEKEKQPPRPLHVQLILK---------------GSNGTPENKIGVHDSHVS---SERQER 392

Query: 1446 RTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXXEEKTIAQAVASSGVDV 1625
              R+KDRPDRG WT   R  G   S                          + ASS VD 
Sbjct: 393  HVRHKDRPDRGVWT--SRFNGADVS------------------------FSSPASSQVDP 426

Query: 1626 IEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPNANRGGQ 1805
            +E                       G+Q            A L H     D+PNA R  +
Sbjct: 427  LE-----------------------GSQ------------ADLKH-----DMPNA-RSVE 445

Query: 1806 IKSHGSSRNNFSSIENGGRHF-RRGPSHGSKDVDNFMVPTEGKSSKRGGAT---SHEKQV 1973
            +KS GS R + SS     +HF RRGPS+G KDVD + V +EGK  +R   +   S+EKQV
Sbjct: 446  VKSFGSVRTSHSSENGFNKHFGRRGPSYGVKDVDGYSVSSEGKHPRRSSTSAYGSNEKQV 505

Query: 1974 WVQKSGSGS 2000
            WVQK+ SGS
Sbjct: 506  WVQKASSGS 514


>ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Solanum tuberosum] gi|565345688|ref|XP_006339923.1|
            PREDICTED: regulator of nonsense transcripts UPF3-like
            isoform X2 [Solanum tuberosum]
            gi|565345690|ref|XP_006339924.1| PREDICTED: regulator of
            nonsense transcripts UPF3-like isoform X3 [Solanum
            tuberosum]
          Length = 508

 Score =  320 bits (821), Expect(2) = e-109
 Identities = 167/258 (64%), Positives = 197/258 (76%)
 Frame = +2

Query: 239  RTKVVLRHLPPGISQSALLDQIDSRFSGRYRWFSFRPGKTSQSYQLYSRAYIDFNGREDV 418
            RTKVVLRHLPP +SQS LL+ +DSRF+GRY WF+FRP KTS  +Q YS+AYIDF   EDV
Sbjct: 5    RTKVVLRHLPPTLSQSMLLEHVDSRFAGRYNWFTFRPAKTSLKHQSYSKAYIDFRNMEDV 64

Query: 419  VEFAEFFDGRVFVNEKGAQFKCIVEYAPSQRVPKVSSKKDGREGTISKDPEYLEFLELLA 598
             EFAEFFDG +FVNEKG QFK IVEYAPSQRVPK   KKD REGTI KDP Y+EFLE LA
Sbjct: 65   TEFAEFFDGHMFVNEKGTQFKTIVEYAPSQRVPKHWLKKDAREGTILKDPAYMEFLEFLA 124

Query: 599  KPVENLPSAEIQLERREAERVGAAKETPIVTPLMDFVRQKRAAKSGSQRPTSNGKLSRKA 778
            KPVENLPSAEIQLER+EAER G+AK+ PIVTPLMD+VRQKRA KSG++R  SNGK S+  
Sbjct: 125  KPVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYVRQKRAVKSGARRSISNGKSSKSV 184

Query: 779  TGAAPGNSRSASTKRGLEKRKASTSMYVLRDSGKNASGKDKATYILVPRREDHQLPDKSI 958
             G +  +  S +++RG EKR  ST+MYV RDS K  + KDK +YIL+P+R D QL  KS 
Sbjct: 185  GGTSSRSPSSTASRRGSEKR-TSTTMYVQRDSSKAGNSKDK-SYILLPKRGDQQLSVKSG 242

Query: 959  AIAAIAGHEKINDNSGRS 1012
            + A  +  + +    GRS
Sbjct: 243  SSAPGSEIDVVEGEIGRS 260



 Score =  105 bits (263), Expect(2) = e-109
 Identities = 103/319 (32%), Positives = 146/319 (45%), Gaps = 6/319 (1%)
 Frame = +3

Query: 1062 EQGTTVASRVVSQQQTETSPAKNFP-VSTSKVNQQREASARMIRSILSNKEARXXXXXXX 1238
            ++G  V+   ++QQ   +S  KN P +S  K NQ++EAS R+IRSIL  K+AR       
Sbjct: 278  KEGPNVSGGSLAQQNV-SSALKNSPSLSALKQNQRQEASGRIIRSILL-KDARQNQSA-- 333

Query: 1239 XXXXXIESSDLEDK--RTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXXDKVVGNVHH 1412
                  +S  ++DK  R  R  + +   +D                     DKVVGN  H
Sbjct: 334  -----FQSDQIQDKDMRPPRPPSMQLFQKD---------------TSGANEDKVVGNEKH 373

Query: 1413 TAGHISEKKEKRTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXXEEKTI 1592
               HI EK+E+R+RN+DRPDRG W PLRR++   AS+  L                    
Sbjct: 374  VV-HI-EKQERRSRNRDRPDRGVWAPLRRADSSQASNGSL-------------------- 411

Query: 1593 AQAVASSGVDVIEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVK 1772
                 SSG+                  PQ+  +     +   GG             E+K
Sbjct: 412  -----SSGI------------------PQSSQV----REFVEGGQG-----------ELK 433

Query: 1773 VDVPNANRGGQIKSHGSSRNNFSSIENGGRHFRRGPSHGSKDVDNFMVPTEGKSSKRGGA 1952
             D+P A RG + +  GS RN+ SS +NG  +++ G   G +DV    +  EGK  K+GG 
Sbjct: 434  NDLPIA-RGTEFRPIGSGRNSHSSADNG--NYKHGGRRGLRDVAGTSI-GEGKPVKKGGT 489

Query: 1953 TSH---EKQVWVQKSGSGS 2000
            +++   EKQVWVQKS SGS
Sbjct: 490  SAYSSLEKQVWVQKSSSGS 508


>ref|XP_006598794.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Glycine max] gi|571524272|ref|XP_006598795.1| PREDICTED:
            regulator of nonsense transcripts UPF3-like isoform X2
            [Glycine max]
          Length = 512

 Score =  324 bits (830), Expect(2) = e-109
 Identities = 169/260 (65%), Positives = 207/260 (79%)
 Frame = +2

Query: 221  MKDPLDRTKVVLRHLPPGISQSALLDQIDSRFSGRYRWFSFRPGKTSQSYQLYSRAYIDF 400
            MK  LDRTKVVLRHLPP IS++ALL QID+ F+GRY W SFRPGK SQ +  YSRAYIDF
Sbjct: 1    MKGALDRTKVVLRHLPPSISEAALLAQIDAAFAGRYNWLSFRPGKISQKHISYSRAYIDF 60

Query: 401  NGREDVVEFAEFFDGRVFVNEKGAQFKCIVEYAPSQRVPKVSSKKDGREGTISKDPEYLE 580
               EDV+ FAEFF+G VFVNEKG+QFK IVEYAPSQRVP+  SKKDGR+GTI KD EYLE
Sbjct: 61   KRPEDVILFAEFFNGHVFVNEKGSQFKVIVEYAPSQRVPRQWSKKDGRDGTIYKDSEYLE 120

Query: 581  FLELLAKPVENLPSAEIQLERREAERVGAAKETPIVTPLMDFVRQKRAAKSGSQRPTSNG 760
            FLELLAKPVENLPSAEIQLE+REAER GAAK+ PI+TPLMDFVRQKRAAK G +R  SNG
Sbjct: 121  FLELLAKPVENLPSAEIQLEKREAERSGAAKDIPIITPLMDFVRQKRAAK-GPRRLLSNG 179

Query: 761  KLSRKATGAAPGNSRSASTKRGLEKRKASTSMYVLRDSGKNASGKDKATYILVPRREDHQ 940
            K+S++A  ++ G+  S +++RG  K++ S +MYV RD GKN++ KDK+T  LVP++ D  
Sbjct: 180  KVSQRAGTSSNGSPSSVTSRRGSGKKRVSATMYVARDPGKNSTIKDKST--LVPKQGDQH 237

Query: 941  LPDKSIAIAAIAGHEKINDN 1000
            L DK+  +A+   +  +++N
Sbjct: 238  LSDKASNMASSDANLTLDEN 257



 Score =  101 bits (251), Expect(2) = e-109
 Identities = 99/309 (32%), Positives = 131/309 (42%), Gaps = 6/309 (1%)
 Frame = +3

Query: 1092 VSQQQTETSPAKNFPVSTS-KVNQQREASARMIRSILSNKEARXXXXXXXXXXXXIESSD 1268
            +SQ    TS AK    ST  K +Q+ E S R+IRSILS KE R            I++S+
Sbjct: 289  MSQHHNVTSSAKMIVGSTVLKQSQRHEGSGRIIRSILSKKELRQSQYSRALSEQQIQTSN 348

Query: 1269 LE-DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXXDKVVGNVHHTAGHISEKKEK 1445
            LE +K+  R    + I +                      +K+  +  H +   SE++E+
Sbjct: 349  LEKEKQPPRPLHVQLILK---------------GSNGTPENKIGVHDSHVS---SERQER 390

Query: 1446 RTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXXEEKTIAQAVASSGVDV 1625
              R+KDRPDRG WT   RS G   S                          + ASS VD 
Sbjct: 391  HVRHKDRPDRGVWT--SRSNGADDS------------------------FSSSASSQVDP 424

Query: 1626 IEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPNANRGGQ 1805
            +E                                      A L H     D PNA R G+
Sbjct: 425  LEGS-----------------------------------HADLKH-----DTPNA-RSGE 443

Query: 1806 IKSHGSSRNNFSSIENGGRHF-RRGPSHGSKDVDNFMVPTEGKSSKRGGAT---SHEKQV 1973
            +KS GS R + SS     +HF RRGPSHG KDVD + V +EGK  +R   +   S+EKQV
Sbjct: 444  VKSLGSVRTSHSSENGFNKHFGRRGPSHGVKDVDGYSVSSEGKHPRRSSTSAYGSNEKQV 503

Query: 1974 WVQKSGSGS 2000
            WVQK+ SG+
Sbjct: 504  WVQKASSGT 512


>ref|XP_004485447.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Cicer arietinum]
          Length = 517

 Score =  330 bits (845), Expect(2) = e-107
 Identities = 169/255 (66%), Positives = 201/255 (78%)
 Frame = +2

Query: 236  DRTKVVLRHLPPGISQSALLDQIDSRFSGRYRWFSFRPGKTSQSYQLYSRAYIDFNGRED 415
            DRTKVV+RHLPP IS+ +L   ID  FSGRY W SFRP K S  +  +SRAYIDFN  ED
Sbjct: 3    DRTKVVVRHLPPTISEDSLSSLIDGSFSGRYNWLSFRPAKISPKHTSFSRAYIDFNKPED 62

Query: 416  VVEFAEFFDGRVFVNEKGAQFKCIVEYAPSQRVPKVSSKKDGREGTISKDPEYLEFLELL 595
            V+EFAEFF+G VFVNEKG QFK  VEYAPSQRVPK  SKKDGR+GTI KDPEYLEFLELL
Sbjct: 63   VIEFAEFFNGHVFVNEKGTQFKVTVEYAPSQRVPKQWSKKDGRDGTIYKDPEYLEFLELL 122

Query: 596  AKPVENLPSAEIQLERREAERVGAAKETPIVTPLMDFVRQKRAAKSGSQRPTSNGKLSRK 775
            AKPVENLPSAEIQLE+REAER GA K+ PIVTPLMDFVRQKRAAK G +R +SNGK++R+
Sbjct: 123  AKPVENLPSAEIQLEKREAERSGAGKDVPIVTPLMDFVRQKRAAK-GPRRLSSNGKVTRR 181

Query: 776  ATGAAPGNSRSASTKRGLEKRKASTSMYVLRDSGKNASGKDKATYILVPRREDHQLPDKS 955
                + G+S SA ++RG  +++ ST+MYV RD GKN++ KDK+TYILVPR+ D  L +KS
Sbjct: 182  TGTPSNGSSSSAPSRRGSARKRVSTTMYVARDPGKNSTVKDKSTYILVPRQGDQHLSNKS 241

Query: 956  IAIAAIAGHEKINDN 1000
              IA+  G+   ++N
Sbjct: 242  SNIASSDGNPTFDEN 256



 Score = 88.6 bits (218), Expect(2) = e-107
 Identities = 90/300 (30%), Positives = 129/300 (43%), Gaps = 3/300 (1%)
 Frame = +3

Query: 1071 TTVASRVVSQQQTETSPAKNFPVSTS-KVNQQREASARMIRSILSNKEARXXXXXXXXXX 1247
            T   S  +SQ  + TS AK    ST+ K NQ+ E S R+I+SILSNK+ R          
Sbjct: 280  TASDSDSMSQHHSITSSAKTILNSTALKQNQRHEGSGRIIKSILSNKDLRQNQSSRAYSE 339

Query: 1248 XXIESSDLE-DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXXDKVVGNVHHTAGH 1424
              +++S+LE +K+ TR    + I +                      +++  +  H +  
Sbjct: 340  RQLQTSNLEKEKQPTRPLHVQLILKG---------------TDGAPENRITVHGLHVS-- 382

Query: 1425 ISEKKEKRTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXXEEKTIAQAV 1604
             SE++E+R R KDRPDRG WT   RS G    DE L                      + 
Sbjct: 383  -SERQERRFRQKDRPDRGIWT--SRSNG---GDESL---------------------SSS 415

Query: 1605 ASSGVDVIEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVP 1784
            ASS VD +E                             GG           H E+K D  
Sbjct: 416  ASSQVDPLE-----------------------------GG-----------HAELKHDTR 435

Query: 1785 NANRGGQIKSHGSSRNNFSSIENGGRHF-RRGPSHGSKDVDNFMVPTEGKSSKRGGATSH 1961
            +A R G++KS GS R + SS     +HF RRGP HG KDVD + V +EGK  ++  ++++
Sbjct: 436  SA-RSGEVKSFGSLRASHSSENGFNKHFGRRGPIHGVKDVDGYSVSSEGKHPRKPSSSAY 494


>ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X4
            [Solanum tuberosum]
          Length = 482

 Score =  321 bits (822), Expect(2) = e-107
 Identities = 174/286 (60%), Positives = 206/286 (72%), Gaps = 10/286 (3%)
 Frame = +2

Query: 239  RTKVVLRHLPPGISQSALLDQIDSRFSGRYRWFSFRPGKTSQSYQLYSRAYIDFNGREDV 418
            RTKVVLRHLPP +SQS LL+ +DSRF+GRY WF+FRP KTS  +Q YS+AYIDF   EDV
Sbjct: 5    RTKVVLRHLPPTLSQSMLLEHVDSRFAGRYNWFTFRPAKTSLKHQSYSKAYIDFRNMEDV 64

Query: 419  VEFAEFFDGRVFVNEKGAQFKCIVEYAPSQRVPKVSSKKDGREGTISKDPEYLEFLELLA 598
             EFAEFFDG +FVNEKG QFK IVEYAPSQRVPK   KKD REGTI KDP Y+EFLE LA
Sbjct: 65   TEFAEFFDGHMFVNEKGTQFKTIVEYAPSQRVPKHWLKKDAREGTILKDPAYMEFLEFLA 124

Query: 599  KPVENLPSAEIQLERREAERVGAAKETPIVTPLMDFVRQKRAAKSGSQRPTSNGKLSRKA 778
            KPVENLPSAEIQLER+EAER G+AK+ PIVTPLMD+VRQKRA KSG++R  SNGK S+  
Sbjct: 125  KPVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYVRQKRAVKSGARRSISNGKSSKSV 184

Query: 779  TGAAPGNSRSASTKRGLEKRKASTSMYVLRDSGKNASGKDKATYILVPRREDHQLPDKSI 958
             G +  +  S +++RG EKR  ST+MYV RDS K  + KDK +YIL+P+R D QL  KS 
Sbjct: 185  GGTSSRSPSSTASRRGSEKR-TSTTMYVQRDSSKAGNSKDK-SYILLPKRGDQQLSVKSG 242

Query: 959  AIAAIAGHEKINDNSGRSRGCCYWK----------KENPASQRKGA 1066
            + A  +  + +    GRS      K          KE P +QR+ A
Sbjct: 243  SSAPGSEIDVVEGEIGRSVTADSGKKKILLLKGKEKEGPNNQRQEA 288



 Score = 97.4 bits (241), Expect(2) = e-107
 Identities = 93/287 (32%), Positives = 129/287 (44%), Gaps = 5/287 (1%)
 Frame = +3

Query: 1155 NQQREASARMIRSILSNKEARXXXXXXXXXXXXIESSDLEDK--RTTRATAARSISRDHF 1328
            NQ++EAS R+IRSIL  K+AR             +S  ++DK  R  R  + +   +D  
Sbjct: 283  NQRQEASGRIIRSILL-KDARQNQSA-------FQSDQIQDKDMRPPRPPSMQLFQKD-- 332

Query: 1329 XXXXXXXXXXXXXXXXXXXDKVVGNVHHTAGHISEKKEKRTRNKDRPDRGFWTPLRRSEG 1508
                               DKVVGN  H   HI EK+E+R+RN+DRPDRG W PLRR++ 
Sbjct: 333  -------------TSGANEDKVVGNEKHVV-HI-EKQERRSRNRDRPDRGVWAPLRRADS 377

Query: 1509 LHASDECLPXXXXXXXXXXXXXXEEKTIAQAVASSGVDVIEDMDSSTKPSFIGEKPQNHD 1688
              AS+  L                         SSG+                  PQ+  
Sbjct: 378  SQASNGSL-------------------------SSGI------------------PQSSQ 394

Query: 1689 IALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPNANRGGQIKSHGSSRNNFSSIENGGRHF 1868
            +     +   GG             E+K D+P A RG + +  GS RN+ SS +NG  ++
Sbjct: 395  V----REFVEGGQG-----------ELKNDLPIA-RGTEFRPIGSGRNSHSSADNG--NY 436

Query: 1869 RRGPSHGSKDVDNFMVPTEGKSSKRGGATSH---EKQVWVQKSGSGS 2000
            + G   G +DV    +  EGK  K+GG +++   EKQVWVQKS SGS
Sbjct: 437  KHGGRRGLRDVAGTSI-GEGKPVKKGGTSAYSSLEKQVWVQKSSSGS 482