BLASTX nr result
ID: Cocculus23_contig00001710
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00001710
(421 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synt... 83 3e-14
ref|XP_006604840.1| PREDICTED: multisubstrate pseudouridine synt... 81 2e-13
ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synt... 81 2e-13
ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synt... 80 2e-13
ref|XP_007147153.1| hypothetical protein PHAVU_006G100200g [Phas... 79 7e-13
ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synt... 75 7e-12
ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synt... 75 7e-12
ref|XP_007030613.1| Pseudouridine synthase family protein isofor... 74 2e-11
ref|XP_007030612.1| Pseudouridine synthase family protein isofor... 74 2e-11
ref|XP_007030611.1| Pseudouridine synthase family protein, putat... 74 2e-11
ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Popu... 74 3e-11
ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g... 73 5e-11
ref|XP_002884472.1| pseudouridylate synthase [Arabidopsis lyrata... 73 5e-11
ref|XP_006838988.1| hypothetical protein AMTR_s00002p00271620 [A... 72 1e-10
ref|XP_006432989.1| hypothetical protein CICLE_v10003382mg [Citr... 71 1e-10
ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synt... 71 1e-10
ref|XP_006300094.1| hypothetical protein CARUB_v10016322mg [Caps... 71 2e-10
ref|XP_004494685.1| PREDICTED: multisubstrate pseudouridine synt... 69 5e-10
emb|CBI34194.3| unnamed protein product [Vitis vinifera] 69 5e-10
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt... 69 5e-10
>ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
[Citrus sinensis]
Length = 739
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/55 (72%), Positives = 44/55 (80%)
Frame = +3
Query: 21 EVGTPQENSTCGSDGQTTMMALKMGFTLPTSCYATMAIRELLKTSTSVSFHKTLN 185
EV P S CG+D Q MALK+G TLP+SCYATMAIRELLKTSTSV+FHKTLN
Sbjct: 685 EVKQPHVESVCGADSQGKQMALKLGLTLPSSCYATMAIRELLKTSTSVAFHKTLN 739
>ref|XP_006604840.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X2
[Glycine max]
Length = 676
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/58 (67%), Positives = 45/58 (77%)
Frame = +3
Query: 15 GGEVGTPQENSTCGSDGQTTMMALKMGFTLPTSCYATMAIRELLKTSTSVSFHKTLNQ 188
G EV P + S GS Q + +ALK+ FTLP SCYATMAIRELLKTSTSV++HKTLNQ
Sbjct: 619 GEEVKLPHDESLIGSSSQDSQIALKLSFTLPASCYATMAIRELLKTSTSVAYHKTLNQ 676
>ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
[Glycine max]
Length = 687
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/58 (67%), Positives = 45/58 (77%)
Frame = +3
Query: 15 GGEVGTPQENSTCGSDGQTTMMALKMGFTLPTSCYATMAIRELLKTSTSVSFHKTLNQ 188
G EV P + S GS Q + +ALK+ FTLP SCYATMAIRELLKTSTSV++HKTLNQ
Sbjct: 630 GEEVKLPHDESLIGSSSQDSQIALKLSFTLPASCYATMAIRELLKTSTSVAYHKTLNQ 687
>ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine
max]
Length = 690
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/58 (65%), Positives = 45/58 (77%)
Frame = +3
Query: 15 GGEVGTPQENSTCGSDGQTTMMALKMGFTLPTSCYATMAIRELLKTSTSVSFHKTLNQ 188
G E+ P + S GS Q + +ALK+ FTLP SCYATMAIRELLKTSTSV++HKTLNQ
Sbjct: 633 GEEIKLPHDESLSGSSSQDSQIALKLSFTLPASCYATMAIRELLKTSTSVAYHKTLNQ 690
>ref|XP_007147153.1| hypothetical protein PHAVU_006G100200g [Phaseolus vulgaris]
gi|561020376|gb|ESW19147.1| hypothetical protein
PHAVU_006G100200g [Phaseolus vulgaris]
Length = 691
Score = 79.0 bits (193), Expect = 7e-13
Identities = 39/58 (67%), Positives = 43/58 (74%)
Frame = +3
Query: 15 GGEVGTPQENSTCGSDGQTTMMALKMGFTLPTSCYATMAIRELLKTSTSVSFHKTLNQ 188
G EV P S C S Q + ALK+ FTLP SCYATMAIRELLKTSTSV++HKTLNQ
Sbjct: 634 GEEVKLPHGESLCDSSSQDSHTALKLSFTLPASCYATMAIRELLKTSTSVAYHKTLNQ 691
>ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
tuberosum]
Length = 685
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +3
Query: 21 EVGTPQENSTCGSDGQTTMMALKMGFTLPTSCYATMAIRELLKTSTSVSFHKTLN 185
E G E S G + + + MALK+ FTLP SCYATMA+RELLKTSTSV+FHK+LN
Sbjct: 630 EAGMQSEKSQSGGNAEESQMALKLSFTLPASCYATMAVRELLKTSTSVAFHKSLN 684
>ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
lycopersicum]
Length = 685
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +3
Query: 21 EVGTPQENSTCGSDGQTTMMALKMGFTLPTSCYATMAIRELLKTSTSVSFHKTLN 185
E G E S G + + + MALK+ FTLP SCYATMA+RELLKTSTSV+FHK+LN
Sbjct: 630 EAGMQSEKSQSGGNAEESQMALKLSFTLPASCYATMAVRELLKTSTSVAFHKSLN 684
>ref|XP_007030613.1| Pseudouridine synthase family protein isoform 3 [Theobroma cacao]
gi|508719218|gb|EOY11115.1| Pseudouridine synthase
family protein isoform 3 [Theobroma cacao]
Length = 672
Score = 73.9 bits (180), Expect = 2e-11
Identities = 38/62 (61%), Positives = 44/62 (70%)
Frame = +3
Query: 3 KADNGGEVGTPQENSTCGSDGQTTMMALKMGFTLPTSCYATMAIRELLKTSTSVSFHKTL 182
+ + E PQ +S S+ T ALK+ FTLP SCYATMAIRELLKTSTSV+FHKTL
Sbjct: 611 EVEGSREAEPPQIHSLPESNSLGTQKALKLAFTLPASCYATMAIRELLKTSTSVAFHKTL 670
Query: 183 NQ 188
NQ
Sbjct: 671 NQ 672
>ref|XP_007030612.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
gi|508719217|gb|EOY11114.1| Pseudouridine synthase
family protein isoform 2 [Theobroma cacao]
Length = 732
Score = 73.9 bits (180), Expect = 2e-11
Identities = 38/62 (61%), Positives = 44/62 (70%)
Frame = +3
Query: 3 KADNGGEVGTPQENSTCGSDGQTTMMALKMGFTLPTSCYATMAIRELLKTSTSVSFHKTL 182
+ + E PQ +S S+ T ALK+ FTLP SCYATMAIRELLKTSTSV+FHKTL
Sbjct: 671 EVEGSREAEPPQIHSLPESNSLGTQKALKLAFTLPASCYATMAIRELLKTSTSVAFHKTL 730
Query: 183 NQ 188
NQ
Sbjct: 731 NQ 732
>ref|XP_007030611.1| Pseudouridine synthase family protein, putative isoform 1
[Theobroma cacao] gi|508719216|gb|EOY11113.1|
Pseudouridine synthase family protein, putative isoform
1 [Theobroma cacao]
Length = 763
Score = 73.9 bits (180), Expect = 2e-11
Identities = 38/62 (61%), Positives = 44/62 (70%)
Frame = +3
Query: 3 KADNGGEVGTPQENSTCGSDGQTTMMALKMGFTLPTSCYATMAIRELLKTSTSVSFHKTL 182
+ + E PQ +S S+ T ALK+ FTLP SCYATMAIRELLKTSTSV+FHKTL
Sbjct: 702 EVEGSREAEPPQIHSLPESNSLGTQKALKLAFTLPASCYATMAIRELLKTSTSVAFHKTL 761
Query: 183 NQ 188
NQ
Sbjct: 762 NQ 763
>ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Populus trichocarpa]
gi|550338143|gb|ERP60572.1| hypothetical protein
POPTR_0005s05300g [Populus trichocarpa]
Length = 752
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 36 QENSTCGSDGQTTMMALKMGFTLPTSCYATMAIRELLKTSTSVSFHKTLNQ 188
+ GS+ Q T MALK+ TLP SCYATMAIRELLKTSTSV++HKTLNQ
Sbjct: 702 ESEQVSGSNWQETQMALKLSLTLPASCYATMAIRELLKTSTSVAYHKTLNQ 752
>ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana]
gi|52354299|gb|AAU44470.1| hypothetical protein
AT3G04820 [Arabidopsis thaliana]
gi|61742699|gb|AAX55170.1| hypothetical protein
At3g04820 [Arabidopsis thaliana]
gi|332640619|gb|AEE74140.1| pseudouridine synthase
[Arabidopsis thaliana]
Length = 715
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/49 (71%), Positives = 39/49 (79%)
Frame = +3
Query: 39 ENSTCGSDGQTTMMALKMGFTLPTSCYATMAIRELLKTSTSVSFHKTLN 185
E T D + T MALKM TLP+SCYATMAIRELLKTSTSV++HKTLN
Sbjct: 667 EKDTGNPDSEQTQMALKMALTLPSSCYATMAIRELLKTSTSVAYHKTLN 715
>ref|XP_002884472.1| pseudouridylate synthase [Arabidopsis lyrata subsp. lyrata]
gi|297330312|gb|EFH60731.1| pseudouridylate synthase
[Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/49 (71%), Positives = 39/49 (79%)
Frame = +3
Query: 39 ENSTCGSDGQTTMMALKMGFTLPTSCYATMAIRELLKTSTSVSFHKTLN 185
E T D + T MALKM TLP+SCYATMAIRELLKTSTSV++HKTLN
Sbjct: 662 EKDTRNPDSEQTQMALKMALTLPSSCYATMAIRELLKTSTSVAYHKTLN 710
>ref|XP_006838988.1| hypothetical protein AMTR_s00002p00271620 [Amborella trichopoda]
gi|548841494|gb|ERN01557.1| hypothetical protein
AMTR_s00002p00271620 [Amborella trichopoda]
Length = 663
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = +3
Query: 36 QENSTCGSDGQTTMMALKMGFTLPTSCYATMAIRELLKTSTSVSFHKTLNQ 188
+E+ GS Q T ALK+ FTLPTSCYATMAIRELLKTSTSV+FHKTLN+
Sbjct: 615 EEDGVPGSSAQQT--ALKLCFTLPTSCYATMAIRELLKTSTSVAFHKTLNE 663
>ref|XP_006432989.1| hypothetical protein CICLE_v10003382mg [Citrus clementina]
gi|557535111|gb|ESR46229.1| hypothetical protein
CICLE_v10003382mg [Citrus clementina]
Length = 697
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/49 (71%), Positives = 38/49 (77%)
Frame = +3
Query: 21 EVGTPQENSTCGSDGQTTMMALKMGFTLPTSCYATMAIRELLKTSTSVS 167
EV P S CG+D Q MALK+G TLP+SCYATMAIRELLKTSTSVS
Sbjct: 640 EVKQPHVESVCGADSQGKQMALKLGLTLPSSCYATMAIRELLKTSTSVS 688
>ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 2
[Fragaria vesca subsp. vesca]
Length = 693
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/51 (70%), Positives = 39/51 (76%)
Frame = +3
Query: 33 PQENSTCGSDGQTTMMALKMGFTLPTSCYATMAIRELLKTSTSVSFHKTLN 185
P S G Q T +ALK+ FTLP SCYATMAIRELLKTSTSV+FHKTLN
Sbjct: 643 PHVESLGGPIPQGTQIALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 693
>ref|XP_006300094.1| hypothetical protein CARUB_v10016322mg [Capsella rubella]
gi|482568803|gb|EOA32992.1| hypothetical protein
CARUB_v10016322mg [Capsella rubella]
Length = 704
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/49 (69%), Positives = 39/49 (79%)
Frame = +3
Query: 39 ENSTCGSDGQTTMMALKMGFTLPTSCYATMAIRELLKTSTSVSFHKTLN 185
E T + + T MALKM TLP+SCYATMAIRELLKTSTSV++HKTLN
Sbjct: 656 EKDTGNPNSEQTQMALKMALTLPSSCYATMAIRELLKTSTSVAYHKTLN 704
>ref|XP_004494685.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X2
[Cicer arietinum]
Length = 669
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/60 (60%), Positives = 43/60 (71%)
Frame = +3
Query: 9 DNGGEVGTPQENSTCGSDGQTTMMALKMGFTLPTSCYATMAIRELLKTSTSVSFHKTLNQ 188
D EV P + S S + + ALK+ FTLP+SCYATMAIRELLKTSTSV++ KTLNQ
Sbjct: 610 DGVKEVILPHDESVPDSSSKDSHTALKLTFTLPSSCYATMAIRELLKTSTSVAYQKTLNQ 669
>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
Length = 693
Score = 69.3 bits (168), Expect = 5e-10
Identities = 35/55 (63%), Positives = 38/55 (69%)
Frame = +3
Query: 21 EVGTPQENSTCGSDGQTTMMALKMGFTLPTSCYATMAIRELLKTSTSVSFHKTLN 185
E+G PQ S ALK+ FTLP SCYATMAIRELLKTSTSV+F KTLN
Sbjct: 636 EIGLPQVEPQFESGAPEAQRALKLSFTLPASCYATMAIRELLKTSTSVAFQKTLN 690
>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
vinifera]
Length = 694
Score = 69.3 bits (168), Expect = 5e-10
Identities = 35/55 (63%), Positives = 38/55 (69%)
Frame = +3
Query: 21 EVGTPQENSTCGSDGQTTMMALKMGFTLPTSCYATMAIRELLKTSTSVSFHKTLN 185
E+G PQ S ALK+ FTLP SCYATMAIRELLKTSTSV+F KTLN
Sbjct: 637 EIGLPQVEPQFESGAPEAQRALKLSFTLPASCYATMAIRELLKTSTSVAFQKTLN 691