BLASTX nr result
ID: Cocculus23_contig00000466
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00000466
(2045 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB80244.1| hypothetical protein L484_025093 [Morus notabilis] 83 4e-13
gb|AEZ04369.1| ribosomal protein S3, partial (mitochondrion) [Mi... 50 2e-09
gb|AEZ04367.1| ribosomal protein S3, partial (mitochondrion) [Ma... 50 2e-09
gb|ABO42386.1| ribosomal protein S3 [Galearia filiformis] 49 4e-09
gb|ADL63928.1| ribosomal protein S3 [Nelumbo nucifera] 47 5e-09
gb|ADL63850.1| ribosomal protein S3 [Euptelea polyandra] 47 5e-09
gb|AEZ04362.1| ribosomal protein S3, partial (mitochondrion) [Co... 49 5e-09
gb|ADL64031.1| ribosomal protein S3 [Trochodendron aralioides] 47 5e-09
gb|ADL64020.1| ribosomal protein S3 [Tetracentron sinense] 47 5e-09
gb|ADL64015.1| ribosomal protein S3 [Takhtajania perrieri] 47 5e-09
gb|ADL63837.1| ribosomal protein S3 [Drimys winteri] 47 5e-09
gb|ADL63780.1| ribosomal protein S3 [Buxus sempervirens] 47 5e-09
gb|ADL63762.1| ribosomal protein S3 [Atherosperma moschatum] 47 5e-09
gb|ABO42353.1| ribosomal protein S3 [Androstachys johnsonii] 48 5e-09
ref|YP_762482.1| ribosomal protein S3 [Tripsacum dactyloides] gi... 49 6e-09
ref|YP_762354.1| ribosomal protein S3 [Sorghum bicolor] gi|11430... 49 6e-09
gb|ADC43931.1| ribosomal protein S3 [Omphalea diandra] 47 6e-09
gb|ABO31951.1| ribosomal protein S3 [Penthorum sedoides] 51 6e-09
gb|ADC43964.1| ribosomal protein S3 [Tetracoccus dioicus] 48 6e-09
gb|ADC43936.1| ribosomal protein S3 [Tetrorchidium cf. macrophyl... 47 6e-09
>gb|EXB80244.1| hypothetical protein L484_025093 [Morus notabilis]
Length = 527
Score = 83.2 bits (204), Expect = 4e-13
Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 16/249 (6%)
Frame = +1
Query: 1345 ETFHIQSKLVTLRVLDGGKLI*FTESSRNKGFSLDLDIDSSRWLMGVKAEAGREKRTEEF 1524
+ F + K+ L++ D G+ I TE +R F ++LD+ + WLM V ++A K+ F
Sbjct: 8 QDFRTKHKVFILQITDYGQSIRITERNRVASFDVNLDLGGAFWLMEVVSQAADAKKDGAF 67
Query: 1525 KCSYCWIHAVTTVESFVNQRGEMLKITRFEKSKARFILIP*QEDDGGWPIFKEALQRLIV 1704
Y V VE N +GE LK+ R + + + ++IP +E+ GW L+
Sbjct: 68 LRKYKGSSYVLVVEVKRNSKGEFLKVMRINRGEVKNVIIPGEENKKGWRDLSRCLENFFC 127
Query: 1705 R----------MSKSALPPSPREEGI-DMHRKMGFDPINLLMVF*ATSRVR*NNIVKHLS 1851
+ M K + + +GI D+ + ++ ++ + I K LS
Sbjct: 128 KKSQTSKNKTLMRKDFTRAAAKHQGILDVREEKRWE--RAVVAYRDWMEEGWTEISKGLS 185
Query: 1852 QALDRKTKVMIMGDDQALVKSLSSAEKDILLA-----LPTSSDLWVIDWSVEAQWCNRKF 2016
+ L+RK +V + D+A++ S E+D L+ + + + W +E W N K
Sbjct: 186 EKLERKVRVSPLFADRAILWCQSDYERDTLVKEGSVHIRNQHAITIKRWCIETHWKNVKI 245
Query: 2017 LCNQSWEGI 2043
SW GI
Sbjct: 246 EGRASWIGI 254
>gb|AEZ04369.1| ribosomal protein S3, partial (mitochondrion) [Microstachys
chamaelea]
Length = 484
Score = 49.7 bits (117), Expect(2) = 2e-09
Identities = 27/52 (51%), Positives = 32/52 (61%)
Frame = +1
Query: 673 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 828
F++E TSEKKC + A+K L HFI Q NDL F+ TKK FP TF F
Sbjct: 232 FFVESSTSEKKCLSEAKKRLTHFIRQANDLRFAGTKKTTISLFPFFGATFFF 283
Score = 41.2 bits (95), Expect(2) = 2e-09
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +2
Query: 809 GC*LFFSKNGIAVYNNHFIEDVQE*LLGQSRIK 907
G FF ++G+ VYNN F ED +E LLGQ RIK
Sbjct: 278 GATFFFPRDGVGVYNNLFFEDAREQLLGQLRIK 310
>gb|AEZ04367.1| ribosomal protein S3, partial (mitochondrion) [Mabea sp. Bell et
al. 94-30]
Length = 482
Score = 49.7 bits (117), Expect(2) = 2e-09
Identities = 27/52 (51%), Positives = 32/52 (61%)
Frame = +1
Query: 673 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 828
F++E TSEKKC + A+K L HFI Q NDL F+ TKK FP TF F
Sbjct: 230 FFVESSTSEKKCLSEAKKRLTHFIRQANDLRFAGTKKTTISLFPFFGATFFF 281
Score = 41.2 bits (95), Expect(2) = 2e-09
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +2
Query: 809 GC*LFFSKNGIAVYNNHFIEDVQE*LLGQSRIK 907
G FF ++G+ VYNN F ED +E LLGQ RIK
Sbjct: 276 GATFFFPRDGVGVYNNLFFEDAREQLLGQLRIK 308
>gb|ABO42386.1| ribosomal protein S3 [Galearia filiformis]
Length = 466
Score = 49.3 bits (116), Expect(2) = 4e-09
Identities = 27/52 (51%), Positives = 31/52 (59%)
Frame = +1
Query: 673 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 828
F++E TSEKKC A+K L HFI Q NDL F+ TKK FP TF F
Sbjct: 220 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFAGTKKTTISLFPFFGATFFF 271
Score = 40.8 bits (94), Expect(2) = 4e-09
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +2
Query: 809 GC*LFFSKNGIAVYNNHFIEDVQE*LLGQSRIK 907
G FF ++G+ VYNN F ED +E LLGQ RIK
Sbjct: 266 GATFFFLRDGVGVYNNLFFEDAREQLLGQLRIK 298
>gb|ADL63928.1| ribosomal protein S3 [Nelumbo nucifera]
Length = 483
Score = 47.0 bits (110), Expect(2) = 5e-09
Identities = 26/52 (50%), Positives = 30/52 (57%)
Frame = +1
Query: 673 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 828
F++E TSEKKC A+K L HFI Q NDL F+ T K FP TF F
Sbjct: 228 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF 279
Score = 42.7 bits (99), Expect(2) = 5e-09
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 809 GC*LFFSKNGIAVYNNHFIEDVQE*LLGQSRIK 907
G FF ++G+ VYNN FIED +E LLGQ RIK
Sbjct: 274 GATFFFPRDGVGVYNNLFIEDAREQLLGQLRIK 306
>gb|ADL63850.1| ribosomal protein S3 [Euptelea polyandra]
Length = 483
Score = 47.0 bits (110), Expect(2) = 5e-09
Identities = 26/52 (50%), Positives = 30/52 (57%)
Frame = +1
Query: 673 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 828
F++E TSEKKC A+K L HFI Q NDL F+ T K FP TF F
Sbjct: 228 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF 279
Score = 42.7 bits (99), Expect(2) = 5e-09
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 809 GC*LFFSKNGIAVYNNHFIEDVQE*LLGQSRIK 907
G FF ++G+ VYNN FIED +E LLGQ RIK
Sbjct: 274 GATFFFPRDGVGVYNNLFIEDAREQLLGQLRIK 306
>gb|AEZ04362.1| ribosomal protein S3, partial (mitochondrion) [Colliguaja
integerrima]
Length = 482
Score = 48.5 bits (114), Expect(2) = 5e-09
Identities = 26/52 (50%), Positives = 32/52 (61%)
Frame = +1
Query: 673 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 828
F++E TSEKKC + A+K L HFI Q NDL F+ T+K FP TF F
Sbjct: 230 FFVESSTSEKKCLSEAKKRLTHFIRQANDLRFAGTRKTTISLFPFFGATFFF 281
Score = 41.2 bits (95), Expect(2) = 5e-09
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +2
Query: 809 GC*LFFSKNGIAVYNNHFIEDVQE*LLGQSRIK 907
G FF ++G+ VYNN F ED +E LLGQ RIK
Sbjct: 276 GATFFFPRDGVGVYNNLFFEDAREQLLGQLRIK 308
>gb|ADL64031.1| ribosomal protein S3 [Trochodendron aralioides]
Length = 478
Score = 47.0 bits (110), Expect(2) = 5e-09
Identities = 26/52 (50%), Positives = 30/52 (57%)
Frame = +1
Query: 673 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 828
F++E TSEKKC A+K L HFI Q NDL F+ T K FP TF F
Sbjct: 223 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF 274
Score = 42.7 bits (99), Expect(2) = 5e-09
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 809 GC*LFFSKNGIAVYNNHFIEDVQE*LLGQSRIK 907
G FF ++G+ VYNN FIED +E LLGQ RIK
Sbjct: 269 GATFFFPRDGVGVYNNLFIEDAREQLLGQLRIK 301
>gb|ADL64020.1| ribosomal protein S3 [Tetracentron sinense]
Length = 478
Score = 47.0 bits (110), Expect(2) = 5e-09
Identities = 26/52 (50%), Positives = 30/52 (57%)
Frame = +1
Query: 673 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 828
F++E TSEKKC A+K L HFI Q NDL F+ T K FP TF F
Sbjct: 223 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF 274
Score = 42.7 bits (99), Expect(2) = 5e-09
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 809 GC*LFFSKNGIAVYNNHFIEDVQE*LLGQSRIK 907
G FF ++G+ VYNN FIED +E LLGQ RIK
Sbjct: 269 GATFFFPRDGVGVYNNLFIEDAREQLLGQLRIK 301
>gb|ADL64015.1| ribosomal protein S3 [Takhtajania perrieri]
Length = 478
Score = 47.0 bits (110), Expect(2) = 5e-09
Identities = 26/52 (50%), Positives = 30/52 (57%)
Frame = +1
Query: 673 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 828
F++E TSEKKC A+K L HFI Q NDL F+ T K FP TF F
Sbjct: 223 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF 274
Score = 42.7 bits (99), Expect(2) = 5e-09
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 809 GC*LFFSKNGIAVYNNHFIEDVQE*LLGQSRIK 907
G FF ++G+ VYNN FIED +E LLGQ RIK
Sbjct: 269 GATFFFPRDGVGVYNNLFIEDAREELLGQLRIK 301
>gb|ADL63837.1| ribosomal protein S3 [Drimys winteri]
Length = 478
Score = 47.0 bits (110), Expect(2) = 5e-09
Identities = 26/52 (50%), Positives = 30/52 (57%)
Frame = +1
Query: 673 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 828
F++E TSEKKC A+K L HFI Q NDL F+ T K FP TF F
Sbjct: 223 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF 274
Score = 42.7 bits (99), Expect(2) = 5e-09
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 809 GC*LFFSKNGIAVYNNHFIEDVQE*LLGQSRIK 907
G FF ++G+ VYNN FIED +E LLGQ RIK
Sbjct: 269 GATFFFPRDGVGVYNNLFIEDAREELLGQLRIK 301
>gb|ADL63780.1| ribosomal protein S3 [Buxus sempervirens]
Length = 478
Score = 47.0 bits (110), Expect(2) = 5e-09
Identities = 26/52 (50%), Positives = 30/52 (57%)
Frame = +1
Query: 673 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 828
F++E TSEKKC A+K L HFI Q NDL F+ T K FP TF F
Sbjct: 223 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF 274
Score = 42.7 bits (99), Expect(2) = 5e-09
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 809 GC*LFFSKNGIAVYNNHFIEDVQE*LLGQSRIK 907
G FF ++G+ VYNN FIED +E LLGQ RIK
Sbjct: 269 GATFFFPRDGVGVYNNLFIEDAREQLLGQLRIK 301
>gb|ADL63762.1| ribosomal protein S3 [Atherosperma moschatum]
Length = 478
Score = 47.0 bits (110), Expect(2) = 5e-09
Identities = 26/52 (50%), Positives = 30/52 (57%)
Frame = +1
Query: 673 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 828
F++E TSEKKC A+K L HFI Q NDL F+ T K FP TF F
Sbjct: 223 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF 274
Score = 42.7 bits (99), Expect(2) = 5e-09
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 809 GC*LFFSKNGIAVYNNHFIEDVQE*LLGQSRIK 907
G FF ++G+ VYNN FIED +E LLGQ RIK
Sbjct: 269 GATFFFPRDGVGVYNNLFIEDAREQLLGQLRIK 301
>gb|ABO42353.1| ribosomal protein S3 [Androstachys johnsonii]
Length = 467
Score = 48.1 bits (113), Expect(2) = 5e-09
Identities = 27/52 (51%), Positives = 30/52 (57%)
Frame = +1
Query: 673 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 828
F++E TSEKKC A+K L HFI Q NDL FS T K FP TF F
Sbjct: 221 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFSGTTKTTISLFPFFGATFFF 272
Score = 41.6 bits (96), Expect(2) = 5e-09
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +2
Query: 809 GC*LFFSKNGIAVYNNHFIEDVQE*LLGQSRIK 907
G FF ++G+ VYNN F ED +E LLGQ RIK
Sbjct: 267 GATFFFPRDGVGVYNNPFFEDAREQLLGQLRIK 299
>ref|YP_762482.1| ribosomal protein S3 [Tripsacum dactyloides]
gi|114432116|gb|ABI74665.1| ribosomal protein S3
(mitochondrion) [Tripsacum dactyloides]
Length = 559
Score = 49.3 bits (116), Expect(2) = 6e-09
Identities = 27/52 (51%), Positives = 31/52 (59%)
Frame = +1
Query: 673 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 828
F++E TSEKKC A+K LIHFI Q NDL F+ T K FP TF F
Sbjct: 288 FFVESSTSEKKCLARAKKRLIHFIRQANDLRFAGTTKTTISLFPFFGATFFF 339
Score = 40.0 bits (92), Expect(2) = 6e-09
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +2
Query: 809 GC*LFFSKNGIAVYNNHFIEDVQE*LLGQSRIK 907
G FFS++G+ VYNN F E +E LLGQ RIK
Sbjct: 334 GATFFFSRDGVGVYNNPFFEYAREQLLGQLRIK 366
>ref|YP_762354.1| ribosomal protein S3 [Sorghum bicolor] gi|114309676|gb|ABI60893.1|
ribosomal protein S3 (mitochondrion) [Sorghum bicolor]
Length = 559
Score = 49.3 bits (116), Expect(2) = 6e-09
Identities = 27/52 (51%), Positives = 31/52 (59%)
Frame = +1
Query: 673 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 828
F++E TSEKKC A+K LIHFI Q NDL F+ T K FP TF F
Sbjct: 288 FFVESSTSEKKCLARAKKRLIHFIRQANDLRFAGTTKTTISLFPFFGATFFF 339
Score = 40.0 bits (92), Expect(2) = 6e-09
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +2
Query: 809 GC*LFFSKNGIAVYNNHFIEDVQE*LLGQSRIK 907
G FFS++G+ VYNN F E +E LLGQ RIK
Sbjct: 334 GATFFFSRDGVGVYNNPFFEYAREQLLGQLRIK 366
>gb|ADC43931.1| ribosomal protein S3 [Omphalea diandra]
Length = 516
Score = 47.4 bits (111), Expect(2) = 6e-09
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = +1
Query: 673 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 828
F++E TSEKKC + A+K L HFI Q NDL F+ T K FP TF F
Sbjct: 254 FFVESSTSEKKCLSEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF 305
Score = 42.0 bits (97), Expect(2) = 6e-09
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +2
Query: 809 GC*LFFSKNGIAVYNNHFIEDVQE*LLGQSRIK 907
G FF ++G+ VYNN F ED +E LLGQ RIK
Sbjct: 300 GATFFFPRDGVGVYNNFFFEDAREQLLGQLRIK 332
>gb|ABO31951.1| ribosomal protein S3 [Penthorum sedoides]
Length = 508
Score = 50.8 bits (120), Expect(2) = 6e-09
Identities = 27/52 (51%), Positives = 31/52 (59%)
Frame = +1
Query: 673 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 828
F++E TSE KC T A+K L HFI Q NDL F+RT K FP TF F
Sbjct: 240 FFIESSTSENKCLTEAKKRLTHFIRQANDLSFARTTKTTISLFPFFGATFFF 291
Score = 38.5 bits (88), Expect(2) = 6e-09
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +2
Query: 809 GC*LFFSKNGIAVYNNHFIEDVQE*LLGQSRIK 907
G FF ++G+ VY N F ED +E LLGQ RIK
Sbjct: 286 GATFFFLRDGVGVYKNLFFEDARELLLGQLRIK 318
>gb|ADC43964.1| ribosomal protein S3 [Tetracoccus dioicus]
Length = 505
Score = 48.1 bits (113), Expect(2) = 6e-09
Identities = 27/52 (51%), Positives = 30/52 (57%)
Frame = +1
Query: 673 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 828
F++E TSEKKC A+K L HFI Q NDL FS T K FP TF F
Sbjct: 243 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFSGTTKTTISLFPFFGATFFF 294
Score = 41.2 bits (95), Expect(2) = 6e-09
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +2
Query: 809 GC*LFFSKNGIAVYNNHFIEDVQE*LLGQSRIK 907
G FF ++G+ VYNN F ED +E LLGQ RIK
Sbjct: 289 GATFFFPRDGVGVYNNLFFEDAREQLLGQLRIK 321
>gb|ADC43936.1| ribosomal protein S3 [Tetrorchidium cf. macrophyllum Bell et al.
93-204]
Length = 505
Score = 47.4 bits (111), Expect(2) = 6e-09
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = +1
Query: 673 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 828
F++E TSEKKC + A+K L HFI Q NDL F+ T K FP TF F
Sbjct: 243 FFVESSTSEKKCLSEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF 294
Score = 42.0 bits (97), Expect(2) = 6e-09
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +2
Query: 809 GC*LFFSKNGIAVYNNHFIEDVQE*LLGQSRIK 907
G FF ++G+ VYNN F ED +E LLGQ RIK
Sbjct: 289 GATFFFPRDGVGVYNNFFFEDAREQLLGQLRIK 321