BLASTX nr result
ID: Cocculus22_contig00032186
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00032186
(205 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containi... 72 4e-15
emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera] 72 4e-15
ref|XP_007218012.1| hypothetical protein PRUPE_ppa005823mg [Prun... 64 4e-12
ref|XP_007009737.1| Pentatricopeptide repeat superfamily protein... 63 6e-12
gb|EXB56423.1| hypothetical protein L484_009849 [Morus notabilis] 67 1e-11
ref|XP_004307416.1| PREDICTED: pentatricopeptide repeat-containi... 59 3e-11
ref|XP_004496333.1| PREDICTED: pentatricopeptide repeat-containi... 62 5e-11
ref|XP_006485934.1| PREDICTED: pentatricopeptide repeat-containi... 60 7e-11
ref|XP_006436207.1| hypothetical protein CICLE_v10033834mg [Citr... 60 7e-11
ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [S... 57 9e-11
ref|XP_006649581.1| PREDICTED: pentatricopeptide repeat-containi... 57 1e-10
ref|XP_004985306.1| PREDICTED: pentatricopeptide repeat-containi... 55 2e-10
tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea m... 55 3e-10
ref|XP_006590198.1| PREDICTED: pentatricopeptide repeat-containi... 62 4e-10
ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group] g... 57 7e-10
gb|EMT30707.1| hypothetical protein F775_11490 [Aegilops tauschii] 54 9e-10
gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indi... 56 1e-09
ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-09
ref|XP_007143673.1| hypothetical protein PHAVU_007G091900g [Phas... 54 2e-09
ref|XP_003625461.1| Pentatricopeptide repeat-containing protein ... 55 3e-09
>ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 71.6 bits (174), Expect(2) = 4e-15
Identities = 33/53 (62%), Positives = 43/53 (81%)
Frame = -1
Query: 205 MEEAFKLRNQMGNMKLSPDVVTYNTLINECFEWTNSSDAFKLLEEIWRRVWRP 47
+EEAFKLR++M N+KL PDVV+YNTLIN C EW+ S+AFKLLEE+ + +P
Sbjct: 329 IEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKP 381
Score = 35.0 bits (79), Expect(2) = 4e-15
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -3
Query: 65 EKGVEANSVTHNIVVKGSCKE 3
EKGV+ N+VTHNI+VK CKE
Sbjct: 376 EKGVKPNAVTHNIMVKWYCKE 396
>emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 71.6 bits (174), Expect(2) = 4e-15
Identities = 33/53 (62%), Positives = 43/53 (81%)
Frame = -1
Query: 205 MEEAFKLRNQMGNMKLSPDVVTYNTLINECFEWTNSSDAFKLLEEIWRRVWRP 47
+EEAFKLR++M N+KL PDVV+YNTLIN C EW+ S+AFKLLEE+ + +P
Sbjct: 329 IEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKP 381
Score = 35.0 bits (79), Expect(2) = 4e-15
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -3
Query: 65 EKGVEANSVTHNIVVKGSCKE 3
EKGV+ N+VTHNI+VK CKE
Sbjct: 376 EKGVKPNAVTHNIMVKWYCKE 396
>ref|XP_007218012.1| hypothetical protein PRUPE_ppa005823mg [Prunus persica]
gi|462414474|gb|EMJ19211.1| hypothetical protein
PRUPE_ppa005823mg [Prunus persica]
Length = 442
Score = 63.9 bits (154), Expect(2) = 4e-12
Identities = 29/53 (54%), Positives = 42/53 (79%)
Frame = -1
Query: 205 MEEAFKLRNQMGNMKLSPDVVTYNTLINECFEWTNSSDAFKLLEEIWRRVWRP 47
+EEA +L+++MG++KL PDVVTYNTLI+ FEW +SSDA L+EE+ + +P
Sbjct: 39 IEEAVRLQDEMGHLKLMPDVVTYNTLIDGYFEWRSSSDALSLIEEMREKGVKP 91
Score = 32.7 bits (73), Expect(2) = 4e-12
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -3
Query: 65 EKGVEANSVTHNIVVKGSCKE 3
EKGV+ N VTHNI++K CKE
Sbjct: 86 EKGVKPNVVTHNIMMKWFCKE 106
>ref|XP_007009737.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao] gi|508726650|gb|EOY18547.1| Pentatricopeptide
repeat superfamily protein, putative [Theobroma cacao]
Length = 761
Score = 62.8 bits (151), Expect(2) = 6e-12
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = -1
Query: 205 MEEAFKLRNQMGNMKLSPDVVTYNTLINECFEWTNSSDAFKLLEEIWRRVWRPI 44
+EEA KLR++M N+K+ PDVVTYNTLIN FEW S + F+L+EE+ + PI
Sbjct: 313 IEEAVKLRDEMENLKVLPDVVTYNTLINGYFEWGCSEEGFRLVEEMKEKGVEPI 366
Score = 33.1 bits (74), Expect(2) = 6e-12
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -3
Query: 65 EKGVEANSVTHNIVVKGSCKE 3
EKGVE +VTHNI+VK CKE
Sbjct: 360 EKGVEPIAVTHNILVKWYCKE 380
>gb|EXB56423.1| hypothetical protein L484_009849 [Morus notabilis]
Length = 768
Score = 67.0 bits (162), Expect(2) = 1e-11
Identities = 27/53 (50%), Positives = 45/53 (84%)
Frame = -1
Query: 205 MEEAFKLRNQMGNMKLSPDVVTYNTLINECFEWTNSSDAFKLLEEIWRRVWRP 47
+EEAF LR++MG++KL PDV+TYNTL++ CF+W +S++AF L+ E++++ +P
Sbjct: 318 IEEAFGLRDEMGSLKLLPDVITYNTLVDGCFKWRSSTEAFGLIAEMFKKGVKP 370
Score = 27.7 bits (60), Expect(2) = 1e-11
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 65 EKGVEANSVTHNIVVKGSCKE 3
+KGV+ N++THNI+ K KE
Sbjct: 365 KKGVKPNAITHNILAKWFSKE 385
>ref|XP_004307416.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Fragaria vesca subsp. vesca]
Length = 619
Score = 58.5 bits (140), Expect(2) = 3e-11
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = -1
Query: 205 MEEAFKLRNQMGNMKLSPDVVTYNTLINECFEWTNSSDAFKLLEEIWRR 59
++EA ++R++M +KL PDVVTYNTLI+ CFEW + A +LLEE+ R
Sbjct: 169 IKEAMRVRDEMEKLKLVPDVVTYNTLIDGCFEWDDEYKALELLEEMGER 217
Score = 35.0 bits (79), Expect(2) = 3e-11
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -3
Query: 65 EKGVEANSVTHNIVVKGSCKE 3
E+GV AN VTHNI+VK CKE
Sbjct: 216 ERGVRANEVTHNIMVKWYCKE 236
>ref|XP_004496333.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like isoform X1 [Cicer arietinum]
gi|502118581|ref|XP_004496334.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g16880-like isoform X2 [Cicer arietinum]
gi|502118584|ref|XP_004496335.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g16880-like isoform X3 [Cicer arietinum]
gi|502118587|ref|XP_004496336.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g16880-like isoform X4 [Cicer arietinum]
Length = 762
Score = 62.0 bits (149), Expect(2) = 5e-11
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = -1
Query: 205 MEEAFKLRNQMGNMKLSPDVVTYNTLINECFEWTNSSDAFKLLEEIWRR 59
++EAF+LR++M N+KL PD+VTYNTLI+ CFE S+ AF LLEE+ R
Sbjct: 326 IDEAFRLRDEMENLKLIPDIVTYNTLIDGCFEHRGSAAAFMLLEEMKSR 374
Score = 30.8 bits (68), Expect(2) = 5e-11
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -3
Query: 62 KGVEANSVTHNIVVKGSCKE 3
+GV+ N+VTHNI VK CKE
Sbjct: 374 RGVKENAVTHNIKVKWFCKE 393
>ref|XP_006485934.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Citrus sinensis]
Length = 775
Score = 60.5 bits (145), Expect(2) = 7e-11
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = -1
Query: 205 MEEAFKLRNQMGNMKLSPDVVTYNTLINECFEWTNSSDAFKLLEEI 68
+EEAF+LR +M ++KL PDVVTYNTLIN FE S +AFKL++E+
Sbjct: 332 LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 377
Score = 32.0 bits (71), Expect(2) = 7e-11
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -3
Query: 65 EKGVEANSVTHNIVVKGSCKE 3
E G++ N+VTHNI++K CKE
Sbjct: 379 EHGIKPNAVTHNIMIKWYCKE 399
>ref|XP_006436207.1| hypothetical protein CICLE_v10033834mg [Citrus clementina]
gi|557538403|gb|ESR49447.1| hypothetical protein
CICLE_v10033834mg [Citrus clementina]
Length = 758
Score = 60.5 bits (145), Expect(2) = 7e-11
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = -1
Query: 205 MEEAFKLRNQMGNMKLSPDVVTYNTLINECFEWTNSSDAFKLLEEI 68
+EEAF+LR +M ++KL PDVVTYNTLIN FE S +AFKL++E+
Sbjct: 332 LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 377
Score = 32.0 bits (71), Expect(2) = 7e-11
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -3
Query: 65 EKGVEANSVTHNIVVKGSCKE 3
E G++ N+VTHNI++K CKE
Sbjct: 379 EHGIKPNAVTHNIMIKWYCKE 399
>ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein
SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 57.4 bits (137), Expect(2) = 9e-11
Identities = 26/47 (55%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
Frame = -1
Query: 205 MEEAFKLRNQMGNMKL-SPDVVTYNTLINECFEWTNSSDAFKLLEEI 68
++EAFKL+++M ++ + SPDVVTYNTL++ CF++ SSDA LLEE+
Sbjct: 331 VDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEM 377
Score = 34.7 bits (78), Expect(2) = 9e-11
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = -3
Query: 65 EKGVEANSVTHNIVVKGSCKE 3
+KGV+++ VTHNIVVKG C+E
Sbjct: 379 DKGVKSSLVTHNIVVKGLCRE 399
>ref|XP_006649581.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Oryza brachyantha]
Length = 792
Score = 56.6 bits (135), Expect(2) = 1e-10
Identities = 25/47 (53%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -1
Query: 205 MEEAFKLRNQMGNMK-LSPDVVTYNTLINECFEWTNSSDAFKLLEEI 68
++EAF+L+++M + + PDVVTYNTL++ CF+W SSDA +LLEE+
Sbjct: 324 LDEAFRLKDEMERLSAVFPDVVTYNTLVDACFKWRCSSDALRLLEEM 370
Score = 34.7 bits (78), Expect(2) = 1e-10
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -3
Query: 65 EKGVEANSVTHNIVVKGSCKE 3
+KGV+ VTHNIVVKG CKE
Sbjct: 372 QKGVKLTLVTHNIVVKGLCKE 392
>ref|XP_004985306.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Setaria italica]
Length = 795
Score = 55.5 bits (132), Expect(2) = 2e-10
Identities = 25/47 (53%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -1
Query: 205 MEEAFKLRNQMGNMKL-SPDVVTYNTLINECFEWTNSSDAFKLLEEI 68
++EAF+L++++ + + SPDVVTYNTL++ CF+W SSDA LLEE+
Sbjct: 338 VDEAFRLKDKIERLGIVSPDVVTYNTLVDACFKWKRSSDALILLEEM 384
Score = 35.0 bits (79), Expect(2) = 2e-10
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -3
Query: 62 KGVEANSVTHNIVVKGSCKE 3
KGV+A+ VTHNIVVKG C+E
Sbjct: 387 KGVKASLVTHNIVVKGLCRE 406
>tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 54.7 bits (130), Expect(2) = 3e-10
Identities = 26/47 (55%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Frame = -1
Query: 205 MEEAFKLRNQMGNMKL-SPDVVTYNTLINECFEWTNSSDAFKLLEEI 68
++EAFKL+++M + + SPDVVTYNTL++ CF+ SSDA LLEE+
Sbjct: 330 VDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEM 376
Score = 35.4 bits (80), Expect(2) = 3e-10
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = -3
Query: 65 EKGVEANSVTHNIVVKGSCKE 3
EKGV+++ VTHNI+VKG C+E
Sbjct: 378 EKGVKSSLVTHNIIVKGLCRE 398
>ref|XP_006590198.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Glycine max]
Length = 613
Score = 61.6 bits (148), Expect(2) = 4e-10
Identities = 26/49 (53%), Positives = 40/49 (81%)
Frame = -1
Query: 205 MEEAFKLRNQMGNMKLSPDVVTYNTLINECFEWTNSSDAFKLLEEIWRR 59
++EA ++R++M ++KL PDVVTYNTLI+ CF+W S++ F+LLEE+ R
Sbjct: 172 IDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSR 220
Score = 28.1 bits (61), Expect(2) = 4e-10
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -3
Query: 59 GVEANSVTHNIVVKGSCKE 3
GVE N+VTHNI+VK KE
Sbjct: 222 GVEPNAVTHNIMVKWFGKE 240
>ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein,
putative, expressed [Oryza sativa Japonica Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa
Japonica Group]
Length = 796
Score = 56.6 bits (135), Expect(2) = 7e-10
Identities = 25/47 (53%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -1
Query: 205 MEEAFKLRNQMGNMKLS-PDVVTYNTLINECFEWTNSSDAFKLLEEI 68
++EAF+L+++M + + PDVVTYNTL++ CF+W SSDA +LLEE+
Sbjct: 329 VDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEM 375
Score = 32.3 bits (72), Expect(2) = 7e-10
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -3
Query: 65 EKGVEANSVTHNIVVKGSCKE 3
+KGV+ VTHNIVVK CKE
Sbjct: 377 DKGVKPTLVTHNIVVKSLCKE 397
>gb|EMT30707.1| hypothetical protein F775_11490 [Aegilops tauschii]
Length = 560
Score = 54.3 bits (129), Expect(2) = 9e-10
Identities = 26/54 (48%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = -1
Query: 205 MEEAFKLRNQMGNM-KLSPDVVTYNTLINECFEWTNSSDAFKLLEEIWRRVWRP 47
++EAF+L+++M + L PDVVT+NTL + CF+W SSDA +LLEE+ + +P
Sbjct: 96 VDEAFRLKDEMERLGTLLPDVVTHNTLADACFKWRCSSDALRLLEEMREKGVKP 149
Score = 34.3 bits (77), Expect(2) = 9e-10
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -3
Query: 65 EKGVEANSVTHNIVVKGSCKE 3
EKGV+ VTHNIV+KG CK+
Sbjct: 144 EKGVKPTLVTHNIVIKGLCKD 164
>gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 55.8 bits (133), Expect(2) = 1e-09
Identities = 25/47 (53%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -1
Query: 205 MEEAFKLRNQMGNMKLS-PDVVTYNTLINECFEWTNSSDAFKLLEEI 68
++EAF+L+++M + + PDVVTYNTL++ CF+W SSDA +LLEE+
Sbjct: 329 VDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEM 375
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -3
Query: 65 EKGVEANSVTHNIVVKGSCKE 3
+KGV+ VTHNIVVK CKE
Sbjct: 377 DKGVKPTLVTHNIVVKSLCKE 397
>ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 57.8 bits (138), Expect(2) = 2e-09
Identities = 23/46 (50%), Positives = 37/46 (80%)
Frame = -1
Query: 205 MEEAFKLRNQMGNMKLSPDVVTYNTLINECFEWTNSSDAFKLLEEI 68
++EAF++R++M M + PDVVTYNTLI+ C +W +SS+ + L+EE+
Sbjct: 334 IDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEM 379
Score = 30.0 bits (66), Expect(2) = 2e-09
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = -3
Query: 65 EKGVEANSVTHNIVVKGSCKE 3
+KGV+ N+VT+NI++K CK+
Sbjct: 381 KKGVKCNAVTYNIILKWMCKK 401
>ref|XP_007143673.1| hypothetical protein PHAVU_007G091900g [Phaseolus vulgaris]
gi|561016863|gb|ESW15667.1| hypothetical protein
PHAVU_007G091900g [Phaseolus vulgaris]
Length = 709
Score = 53.9 bits (128), Expect(2) = 2e-09
Identities = 23/46 (50%), Positives = 36/46 (78%)
Frame = -1
Query: 205 MEEAFKLRNQMGNMKLSPDVVTYNTLINECFEWTNSSDAFKLLEEI 68
++EA ++R++M +KL PDVVTYNTLI+ F+W S + F+L+EE+
Sbjct: 267 IDEAIRVRDEMVVLKLMPDVVTYNTLIDGSFKWCGSVEGFRLIEEM 312
Score = 33.5 bits (75), Expect(2) = 2e-09
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -3
Query: 62 KGVEANSVTHNIVVKGSCKE 3
+GVE N VTHNIVVK CKE
Sbjct: 315 RGVEMNVVTHNIVVKWLCKE 334
>ref|XP_003625461.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500476|gb|AES81679.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 395
Score = 55.1 bits (131), Expect(2) = 3e-09
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = -1
Query: 205 MEEAFKLRNQMGNMKLSPDVVTYNTLINECFEWTNSSDAFKLLEEIWRR 59
++EA +LR++M +++L PD VTYNTLI+ CFE S+ AFKL+EE+ R
Sbjct: 143 IDEAVRLRDEMESLRLVPDGVTYNTLIDGCFEHQGSAAAFKLVEEMKSR 191
Score = 32.0 bits (71), Expect(2) = 3e-09
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -3
Query: 62 KGVEANSVTHNIVVKGSCKE 3
+GV+ N+VTHNI+VK CKE
Sbjct: 191 RGVKENAVTHNIMVKWFCKE 210