BLASTX nr result
ID: Cocculus22_contig00032164
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00032164
(266 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007052071.1| Pentatricopeptide repeat (PPR) superfamily p... 110 2e-22
ref|XP_004514160.1| PREDICTED: pentatricopeptide repeat-containi... 109 3e-22
ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containi... 108 6e-22
ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi... 107 1e-21
ref|XP_002511709.1| pentatricopeptide repeat-containing protein,... 107 1e-21
ref|XP_002511699.1| pentatricopeptide repeat-containing protein,... 107 1e-21
ref|XP_004229808.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-21
ref|XP_002320719.2| pentatricopeptide repeat-containing family p... 104 1e-20
ref|XP_007155354.1| hypothetical protein PHAVU_003G194000g [Phas... 103 3e-20
gb|AHB18411.1| pentatricopeptide repeat-containing protein [Goss... 102 6e-20
emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera] 102 6e-20
ref|XP_006490914.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
ref|XP_006445271.1| hypothetical protein CICLE_v10023562mg, part... 98 1e-18
ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containi... 95 1e-17
gb|AEN99837.1| chlororespiratory reduction 4, partial [Lobularia... 94 3e-17
gb|AEN99839.1| chlororespiratory reduction 4 [Nasturtium officin... 93 3e-17
ref|XP_002882007.1| hypothetical protein ARALYDRAFT_483672 [Arab... 92 8e-17
ref|XP_002882006.1| hypothetical protein ARALYDRAFT_903976 [Arab... 92 8e-17
ref|XP_002882005.1| hypothetical protein ARALYDRAFT_903974 [Arab... 92 8e-17
gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta] 92 1e-16
>ref|XP_007052071.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao] gi|508704332|gb|EOX96228.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative [Theobroma cacao]
Length = 637
Score = 110 bits (276), Expect = 2e-22
Identities = 54/87 (62%), Positives = 67/87 (77%)
Frame = +2
Query: 5 KRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSLVPDHATLVIALSAVAELGQINEGT 184
+RDVV NAM+ GYVQNG C EALE+F+ L +L PD+ATL+I LSA+A+LG+I++G
Sbjct: 312 ERDVVVCNAMMGGYVQNGYCSEALEIFYHLQRYDNLQPDNATLLIVLSAIAQLGRIDKGL 371
Query: 185 AIHEYTERNAISLDGNLGVAFIDMYSK 265
AIH+Y E N SL G LGVA IDMYSK
Sbjct: 372 AIHQYLEENKFSLSGRLGVALIDMYSK 398
>ref|XP_004514160.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cicer arietinum]
Length = 630
Score = 109 bits (273), Expect = 3e-22
Identities = 51/87 (58%), Positives = 68/87 (78%)
Frame = +2
Query: 5 KRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSLVPDHATLVIALSAVAELGQINEGT 184
+RDVV N+M+AGYVQNG C+EAL+LFHD+ + ++PD+ TL+I L+AVA+LG++ +G
Sbjct: 319 RRDVVCCNSMMAGYVQNGYCIEALKLFHDMRRATDMLPDNTTLLIVLTAVAQLGRVEDGV 378
Query: 185 AIHEYTERNAISLDGNLGVAFIDMYSK 265
AIH+Y N SL NLGVA IDMYSK
Sbjct: 379 AIHQYLIDNGYSLSDNLGVAVIDMYSK 405
>ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Solanum tuberosum]
Length = 625
Score = 108 bits (271), Expect = 6e-22
Identities = 52/86 (60%), Positives = 67/86 (77%)
Frame = +2
Query: 8 RDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSLVPDHATLVIALSAVAELGQINEGTA 187
RDV++ NA++AGYV+NG CLEAL++FHD+L +SL PD T ++ALSAVAELG I+EG A
Sbjct: 313 RDVISCNAIMAGYVKNGHCLEALKVFHDMLRGNSLAPDSTTALLALSAVAELGYIDEGIA 372
Query: 188 IHEYTERNAISLDGNLGVAFIDMYSK 265
+H Y E N + G LGVA IDMY+K
Sbjct: 373 LHCYIEENGFLVAGKLGVALIDMYAK 398
>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 107 bits (268), Expect = 1e-21
Identities = 51/87 (58%), Positives = 65/87 (74%)
Frame = +2
Query: 5 KRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSLVPDHATLVIALSAVAELGQINEGT 184
+RDV++ NAM+AGYVQNG +EAL FHD+L+ L PD+ATL+I LSA+A+LG +EG
Sbjct: 312 ERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGV 371
Query: 185 AIHEYTERNAISLDGNLGVAFIDMYSK 265
A+H Y E N SL LGVA IDMY+K
Sbjct: 372 ALHCYIEDNGFSLSEKLGVALIDMYAK 398
>ref|XP_002511709.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548889|gb|EEF50378.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 450
Score = 107 bits (268), Expect = 1e-21
Identities = 52/86 (60%), Positives = 65/86 (75%)
Frame = +2
Query: 8 RDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSLVPDHATLVIALSAVAELGQINEGTA 187
RDVV NAM++GYVQNG C+EAL +FHD+ S+L PD+ATL+I LSA+A+LG I +G
Sbjct: 291 RDVVACNAMMSGYVQNGYCMEALGIFHDMQRESNLCPDNATLLIVLSAIAQLGHIEKGVE 350
Query: 188 IHEYTERNAISLDGNLGVAFIDMYSK 265
IH Y + N SL+ LGVA IDMYSK
Sbjct: 351 IHCYIQENGFSLEEKLGVALIDMYSK 376
>ref|XP_002511699.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548879|gb|EEF50368.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 474
Score = 107 bits (268), Expect = 1e-21
Identities = 52/86 (60%), Positives = 65/86 (75%)
Frame = +2
Query: 8 RDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSLVPDHATLVIALSAVAELGQINEGTA 187
RDVV NAM++GYVQNG C+EAL +FHD+ S+L PD+ATL+I LSA+A+LG I +G
Sbjct: 315 RDVVACNAMMSGYVQNGYCMEALGIFHDMQRESNLCPDNATLLIVLSAIAQLGHIEKGVE 374
Query: 188 IHEYTERNAISLDGNLGVAFIDMYSK 265
IH Y + N SL+ LGVA IDMYSK
Sbjct: 375 IHCYIQENGFSLEEKLGVALIDMYSK 400
>ref|XP_004229808.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Solanum lycopersicum]
Length = 625
Score = 107 bits (267), Expect = 2e-21
Identities = 51/86 (59%), Positives = 67/86 (77%)
Frame = +2
Query: 8 RDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSLVPDHATLVIALSAVAELGQINEGTA 187
RDV++ NA++AGYV+NG CLEAL++FHD+L+ SS PD T ++ALSAV+ELG I+EG A
Sbjct: 313 RDVISCNAIMAGYVKNGHCLEALKVFHDMLSDSSPAPDSTTALLALSAVSELGYIDEGIA 372
Query: 188 IHEYTERNAISLDGNLGVAFIDMYSK 265
+H Y E N + G LGVA IDMY+K
Sbjct: 373 LHCYIEENGFPVAGKLGVALIDMYAK 398
>ref|XP_002320719.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550323642|gb|EEE99034.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 643
Score = 104 bits (260), Expect = 1e-20
Identities = 50/87 (57%), Positives = 67/87 (77%)
Frame = +2
Query: 5 KRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSLVPDHATLVIALSAVAELGQINEGT 184
+RDVV +NAM+ GYVQNG C+EAL +F+ + + + + D+ATL+IALSA+A+LG I++G
Sbjct: 317 ERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIAQLGHIDKGV 376
Query: 185 AIHEYTERNAISLDGNLGVAFIDMYSK 265
AIH + E SLDG LGVA IDMYSK
Sbjct: 377 AIHRFIEEIGFSLDGRLGVALIDMYSK 403
>ref|XP_007155354.1| hypothetical protein PHAVU_003G194000g [Phaseolus vulgaris]
gi|561028708|gb|ESW27348.1| hypothetical protein
PHAVU_003G194000g [Phaseolus vulgaris]
Length = 618
Score = 103 bits (256), Expect = 3e-20
Identities = 46/87 (52%), Positives = 64/87 (73%)
Frame = +2
Query: 5 KRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSLVPDHATLVIALSAVAELGQINEGT 184
+RDV++ N+M+AGYVQNG C+EAL++FHD+ ++ PD TL+I L+A A+LG + +G
Sbjct: 307 RRDVISCNSMMAGYVQNGYCVEALKIFHDMKRAGNVFPDDTTLLIVLTAFAQLGHVEDGV 366
Query: 185 AIHEYTERNAISLDGNLGVAFIDMYSK 265
IH Y + SL+G LGVA IDMYSK
Sbjct: 367 VIHHYLMKKGYSLNGKLGVALIDMYSK 393
>gb|AHB18411.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 637
Score = 102 bits (254), Expect = 6e-20
Identities = 51/88 (57%), Positives = 65/88 (73%)
Frame = +2
Query: 2 NKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSLVPDHATLVIALSAVAELGQINEG 181
++RD+V NAM+AG VQNG C EALE+F+ L SL PD ATL+IALSA+A+LG ++ G
Sbjct: 311 SERDIVVCNAMMAGCVQNGYCGEALEIFYHLPRNCSLQPDSATLLIALSAIAQLGHVDRG 370
Query: 182 TAIHEYTERNAISLDGNLGVAFIDMYSK 265
A+H Y ++ SL G LGVA IDMYSK
Sbjct: 371 LALHHYLKQKKFSLGGRLGVALIDMYSK 398
>emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
Length = 690
Score = 102 bits (254), Expect = 6e-20
Identities = 49/87 (56%), Positives = 63/87 (72%)
Frame = +2
Query: 5 KRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSLVPDHATLVIALSAVAELGQINEGT 184
+RDV++ NAM+AGYVQNG +EAL FHD+L+ L P +ATL+I LSA+A+LG +EG
Sbjct: 368 ERDVISCNAMMAGYVQNGXLMEALXFFHDMLSXKELFPXNATLLITLSAIAQLGHFDEGV 427
Query: 185 AIHEYTERNAISLDGNLGVAFIDMYSK 265
A+H Y E N SL LG A IDMY+K
Sbjct: 428 ALHCYIEDNGFSLSEKLGXALIDMYAK 454
>ref|XP_006490914.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Citrus sinensis]
Length = 634
Score = 97.8 bits (242), Expect = 1e-18
Identities = 49/87 (56%), Positives = 64/87 (73%)
Frame = +2
Query: 5 KRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSLVPDHATLVIALSAVAELGQINEGT 184
KRDVV NAM+ GYV+NG ++ALE+F ++ L PD A+LVI LSA+A+LG I++G
Sbjct: 309 KRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGV 368
Query: 185 AIHEYTERNAISLDGNLGVAFIDMYSK 265
AIH Y E++ SL+G GVA IDMYSK
Sbjct: 369 AIHRYLEKDQFSLNGKHGVALIDMYSK 395
>ref|XP_006445271.1| hypothetical protein CICLE_v10023562mg, partial [Citrus clementina]
gi|557547533|gb|ESR58511.1| hypothetical protein
CICLE_v10023562mg, partial [Citrus clementina]
Length = 658
Score = 97.8 bits (242), Expect = 1e-18
Identities = 49/87 (56%), Positives = 64/87 (73%)
Frame = +2
Query: 5 KRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSLVPDHATLVIALSAVAELGQINEGT 184
KRDVV NAM+ GYV+NG ++ALE+F ++ L PD A+LVI LSA+A+LG I++G
Sbjct: 366 KRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGV 425
Query: 185 AIHEYTERNAISLDGNLGVAFIDMYSK 265
AIH Y E++ SL+G GVA IDMYSK
Sbjct: 426 AIHRYLEKDQFSLNGKHGVALIDMYSK 452
>ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/86 (50%), Positives = 61/86 (70%)
Frame = +2
Query: 8 RDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSLVPDHATLVIALSAVAELGQINEGTA 187
+DVV +N ++AGY QNG EALE+FH++ S+L PD TLV+ALSA+++LG + + +
Sbjct: 316 KDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAAS 375
Query: 188 IHEYTERNAISLDGNLGVAFIDMYSK 265
+H Y N IS+ G + VA IDMYSK
Sbjct: 376 MHNYFLENGISVTGKVAVALIDMYSK 401
>gb|AEN99837.1| chlororespiratory reduction 4, partial [Lobularia maritima]
Length = 570
Score = 93.6 bits (231), Expect = 3e-17
Identities = 47/86 (54%), Positives = 60/86 (69%)
Frame = +2
Query: 8 RDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSLVPDHATLVIALSAVAELGQINEGTA 187
RDVV +N+M+ GYVQN +EALE+F+D+ S L PD TLVI LSA+A+LG++++
Sbjct: 276 RDVVAYNSMMGGYVQNKYHMEALEVFYDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVD 335
Query: 188 IHEYTERNAISLDGNLGVAFIDMYSK 265
IH Y LDG LGVA IDMYSK
Sbjct: 336 IHLYIVEKRFLLDGKLGVALIDMYSK 361
>gb|AEN99839.1| chlororespiratory reduction 4 [Nasturtium officinale]
Length = 614
Score = 93.2 bits (230), Expect = 3e-17
Identities = 47/86 (54%), Positives = 59/86 (68%)
Frame = +2
Query: 8 RDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSLVPDHATLVIALSAVAELGQINEGTA 187
RDVV +N+M+AGYVQN +EALE+F D+ S L PD TLVI LSA+A+LGQ+++
Sbjct: 313 RDVVAYNSMMAGYVQNRHHMEALEIFSDMEKESHLTPDETTLVIVLSAIAQLGQLSKAMD 372
Query: 188 IHEYTERNAISLDGNLGVAFIDMYSK 265
+H Y L G LGVA IDMYSK
Sbjct: 373 MHLYIVEKQFYLGGKLGVALIDMYSK 398
>ref|XP_002882007.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata] gi|297327846|gb|EFH58266.1| hypothetical protein
ARALYDRAFT_483672 [Arabidopsis lyrata subsp. lyrata]
Length = 606
Score = 92.0 bits (227), Expect = 8e-17
Identities = 47/86 (54%), Positives = 61/86 (70%)
Frame = +2
Query: 8 RDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSLVPDHATLVIALSAVAELGQINEGTA 187
RDVV +N+M+AGYVQN +EALE+F+D+ S L PD TLVI LSA+A+LG++++ T
Sbjct: 305 RDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLGRLSKATD 364
Query: 188 IHEYTERNAISLDGNLGVAFIDMYSK 265
+H Y L G LGVA IDMYSK
Sbjct: 365 MHLYIVEKQFYLGGKLGVALIDMYSK 390
>ref|XP_002882006.1| hypothetical protein ARALYDRAFT_903976 [Arabidopsis lyrata subsp.
lyrata] gi|297327845|gb|EFH58265.1| hypothetical protein
ARALYDRAFT_903976 [Arabidopsis lyrata subsp. lyrata]
Length = 412
Score = 92.0 bits (227), Expect = 8e-17
Identities = 47/86 (54%), Positives = 61/86 (70%)
Frame = +2
Query: 8 RDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSLVPDHATLVIALSAVAELGQINEGTA 187
RDVV +N+M+AGYVQN +EALE+F+D+ S L PD TLVI LSA+A+LG++++ T
Sbjct: 111 RDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLGRLSKATD 170
Query: 188 IHEYTERNAISLDGNLGVAFIDMYSK 265
+H Y L G LGVA IDMYSK
Sbjct: 171 MHLYIVEKQFYLGGKLGVALIDMYSK 196
>ref|XP_002882005.1| hypothetical protein ARALYDRAFT_903974 [Arabidopsis lyrata subsp.
lyrata] gi|297327844|gb|EFH58264.1| hypothetical protein
ARALYDRAFT_903974 [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 92.0 bits (227), Expect = 8e-17
Identities = 47/86 (54%), Positives = 61/86 (70%)
Frame = +2
Query: 8 RDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSLVPDHATLVIALSAVAELGQINEGTA 187
RDVV +N+M+AGYVQN +EALE+F+D+ S L PD TLVI LSA+A+LG++++ T
Sbjct: 107 RDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLGRLSKATD 166
Query: 188 IHEYTERNAISLDGNLGVAFIDMYSK 265
+H Y L G LGVA IDMYSK
Sbjct: 167 MHLYIVEKQFYLGGKLGVALIDMYSK 192
>gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta]
Length = 615
Score = 91.7 bits (226), Expect = 1e-16
Identities = 45/87 (51%), Positives = 62/87 (71%)
Frame = +2
Query: 5 KRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSLVPDHATLVIALSAVAELGQINEGT 184
+RDVV +N+M+AGYVQN +EA+++F+D+ S L PD TLVI LSA+A+LG++++
Sbjct: 313 QRDVVAYNSMMAGYVQNRYHMEAIDIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAM 372
Query: 185 AIHEYTERNAISLDGNLGVAFIDMYSK 265
+H YT L G LGVA IDMYSK
Sbjct: 373 DMHLYTVEKKFLLGGKLGVALIDMYSK 399