BLASTX nr result
ID: Cocculus22_contig00031934
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00031934
(323 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containi... 132 5e-29
ref|XP_007033247.1| Mitochondrial editing factor 22 [Theobroma c... 115 5e-24
gb|EXC06936.1| hypothetical protein L484_007616 [Morus notabilis] 113 3e-23
ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containi... 111 9e-23
ref|XP_006407296.1| hypothetical protein EUTSA_v10020185mg [Eutr... 109 5e-22
ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp.... 108 6e-22
ref|XP_007139254.1| hypothetical protein PHAVU_008G014200g [Phas... 108 1e-21
ref|XP_004304934.1| PREDICTED: pentatricopeptide repeat-containi... 107 1e-21
ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis th... 106 3e-21
dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana] 106 3e-21
ref|XP_002319950.1| hypothetical protein POPTR_0013s14820g [Popu... 104 1e-20
ref|XP_006299513.1| hypothetical protein CARUB_v10015683mg [Caps... 103 3e-20
gb|EPS72721.1| hypothetical protein M569_02036 [Genlisea aurea] 98 1e-18
ref|XP_004492095.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
ref|XP_002522705.1| pentatricopeptide repeat-containing protein,... 97 3e-18
ref|XP_003621820.1| Pentatricopeptide repeat-containing protein,... 92 6e-17
ref|XP_006857627.1| hypothetical protein AMTR_s00061p00127300 [A... 80 3e-13
ref|XP_006299486.1| hypothetical protein CARUB_v10015651mg [Caps... 79 9e-13
ref|XP_007227273.1| hypothetical protein PRUPE_ppa017736mg [Prun... 75 1e-11
ref|XP_002533229.1| pentatricopeptide repeat-containing protein,... 74 2e-11
>ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera] gi|296081235|emb|CBI17979.3| unnamed
protein product [Vitis vinifera]
Length = 742
Score = 132 bits (332), Expect = 5e-29
Identities = 58/87 (66%), Positives = 73/87 (83%)
Frame = +2
Query: 62 NSFDYDSFYASLLDKSTHKSHLRQIHAQILVSGLKESNFLATKFVHVSFNLGEISYARKL 241
+ FD+DSF++SLLD S HK HL QIHAQ++VSGL ES FL TKFV+ S+N+GEI YARK+
Sbjct: 66 SGFDFDSFFSSLLDHSVHKRHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKV 125
Query: 242 FEEIPEPNVFLWNSIVRGYSKHNMFSE 322
F+E PEP+VFLWN+I+RGYS HN F +
Sbjct: 126 FDEFPEPSVFLWNAIIRGYSSHNFFGD 152
>ref|XP_007033247.1| Mitochondrial editing factor 22 [Theobroma cacao]
gi|508712276|gb|EOY04173.1| Mitochondrial editing factor
22 [Theobroma cacao]
Length = 735
Score = 115 bits (289), Expect = 5e-24
Identities = 51/90 (56%), Positives = 74/90 (82%)
Frame = +2
Query: 50 ATHINSFDYDSFYASLLDKSTHKSHLRQIHAQILVSGLKESNFLATKFVHVSFNLGEISY 229
+T ++F++DSFYA+LLD ST +HL QIHA++++ + ++ FL TK ++ + NLGEISY
Sbjct: 55 STIFHTFNFDSFYANLLDSSTRNAHLTQIHAKLVLLDIHQNGFLITKLINSAVNLGEISY 114
Query: 230 ARKLFEEIPEPNVFLWNSIVRGYSKHNMFS 319
ARK+F+E P+P+VFLWN+IVRGYSK NMF+
Sbjct: 115 ARKVFDEFPDPDVFLWNAIVRGYSKCNMFA 144
>gb|EXC06936.1| hypothetical protein L484_007616 [Morus notabilis]
Length = 734
Score = 113 bits (282), Expect = 3e-23
Identities = 53/81 (65%), Positives = 66/81 (81%)
Frame = +2
Query: 80 SFYASLLDKSTHKSHLRQIHAQILVSGLKESNFLATKFVHVSFNLGEISYARKLFEEIPE 259
SFYA LL STHK HL QIHAQ+L+SGL+++ FL TK V+VS ++G YARKLF+E +
Sbjct: 64 SFYAYLLGSSTHKKHLDQIHAQLLISGLQQNGFLITKLVNVSSDIGCNFYARKLFDEFTD 123
Query: 260 PNVFLWNSIVRGYSKHNMFSE 322
P+VFLWN+IVRGYSKHNMF +
Sbjct: 124 PDVFLWNAIVRGYSKHNMFGD 144
>ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 111 bits (278), Expect = 9e-23
Identities = 50/89 (56%), Positives = 70/89 (78%)
Frame = +2
Query: 56 HINSFDYDSFYASLLDKSTHKSHLRQIHAQILVSGLKESNFLATKFVHVSFNLGEISYAR 235
H + F+ DSFYASL+D STHK HL QIH ++++SGL+ + FL TK V+ S NLG+I YAR
Sbjct: 49 HDHCFNSDSFYASLIDNSTHKRHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYAR 108
Query: 236 KLFEEIPEPNVFLWNSIVRGYSKHNMFSE 322
KLF+E P+VF+WN+I+R YS++NM+ +
Sbjct: 109 KLFDEFCYPDVFMWNAIIRSYSRNNMYRD 137
>ref|XP_006407296.1| hypothetical protein EUTSA_v10020185mg [Eutrema salsugineum]
gi|557108442|gb|ESQ48749.1| hypothetical protein
EUTSA_v10020185mg [Eutrema salsugineum]
Length = 694
Score = 109 bits (272), Expect = 5e-22
Identities = 49/90 (54%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Frame = +2
Query: 56 HINS-FDYDSFYASLLDKSTHKSHLRQIHAQILVSGLKESNFLATKFVHVSFNLGEISYA 232
H NS DSFYA+L+D STHKS LRQIHA++LV GL+ S FL TK +H S + G+I +A
Sbjct: 13 HSNSGIHSDSFYAALIDGSTHKSQLRQIHARLLVLGLQFSGFLITKLIHASSSFGDICFA 72
Query: 233 RKLFEEIPEPNVFLWNSIVRGYSKHNMFSE 322
R++F+++P P +F WN+I+RGYS++N+F +
Sbjct: 73 RQVFDDLPRPQIFPWNAIIRGYSRNNLFQD 102
>ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 108 bits (271), Expect = 6e-22
Identities = 47/82 (57%), Positives = 67/82 (81%)
Frame = +2
Query: 77 DSFYASLLDKSTHKSHLRQIHAQILVSGLKESNFLATKFVHVSFNLGEISYARKLFEEIP 256
DSFYASL+D STHK+ LRQIHA++LV GL+ S FL TK +H S + G+I++AR++F+++P
Sbjct: 21 DSFYASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLP 80
Query: 257 EPNVFLWNSIVRGYSKHNMFSE 322
P VF WN+I+RGYS++N F +
Sbjct: 81 RPQVFPWNAIIRGYSRNNHFQD 102
>ref|XP_007139254.1| hypothetical protein PHAVU_008G014200g [Phaseolus vulgaris]
gi|593331658|ref|XP_007139255.1| hypothetical protein
PHAVU_008G014200g [Phaseolus vulgaris]
gi|561012387|gb|ESW11248.1| hypothetical protein
PHAVU_008G014200g [Phaseolus vulgaris]
gi|561012388|gb|ESW11249.1| hypothetical protein
PHAVU_008G014200g [Phaseolus vulgaris]
Length = 727
Score = 108 bits (269), Expect = 1e-21
Identities = 51/89 (57%), Positives = 67/89 (75%)
Frame = +2
Query: 56 HINSFDYDSFYASLLDKSTHKSHLRQIHAQILVSGLKESNFLATKFVHVSFNLGEISYAR 235
H S + DSFYASL+D STHK HL QIH Q++VSGL+ + FL TK V+ S NL +I YAR
Sbjct: 49 HDRSVNSDSFYASLIDNSTHKRHLDQIHNQLVVSGLQHNGFLMTKLVNGSSNLAQICYAR 108
Query: 236 KLFEEIPEPNVFLWNSIVRGYSKHNMFSE 322
KLF+ P+VF+WN+I+R YS++NMF +
Sbjct: 109 KLFDGFCFPDVFMWNAIIRSYSRNNMFRD 137
>ref|XP_004304934.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Fragaria vesca subsp. vesca]
Length = 739
Score = 107 bits (268), Expect = 1e-21
Identities = 48/85 (56%), Positives = 66/85 (77%)
Frame = +2
Query: 68 FDYDSFYASLLDKSTHKSHLRQIHAQILVSGLKESNFLATKFVHVSFNLGEISYARKLFE 247
+D +S +AS +D ST ++HL QIHAQ+LV G + S FL TK V+ S NLG ISYAR++F+
Sbjct: 65 YDSESSFASFIDSSTRRTHLTQIHAQLLVLGFQASAFLITKLVNCSSNLGHISYARQVFD 124
Query: 248 EIPEPNVFLWNSIVRGYSKHNMFSE 322
E +P VFLWN+I+RGYSKHN +++
Sbjct: 125 EFTDPGVFLWNAIIRGYSKHNAYAD 149
>ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g12770 gi|11994419|dbj|BAB02421.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor
22 [Arabidopsis thaliana]
Length = 694
Score = 106 bits (265), Expect = 3e-21
Identities = 44/82 (53%), Positives = 67/82 (81%)
Frame = +2
Query: 77 DSFYASLLDKSTHKSHLRQIHAQILVSGLKESNFLATKFVHVSFNLGEISYARKLFEEIP 256
DSFYASL+D +THK+ L+QIHA++LV GL+ S FL TK +H S + G+I++AR++F+++P
Sbjct: 21 DSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 80
Query: 257 EPNVFLWNSIVRGYSKHNMFSE 322
P +F WN+I+RGYS++N F +
Sbjct: 81 RPQIFPWNAIIRGYSRNNHFQD 102
>dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 106 bits (265), Expect = 3e-21
Identities = 44/82 (53%), Positives = 67/82 (81%)
Frame = +2
Query: 77 DSFYASLLDKSTHKSHLRQIHAQILVSGLKESNFLATKFVHVSFNLGEISYARKLFEEIP 256
DSFYASL+D +THK+ L+QIHA++LV GL+ S FL TK +H S + G+I++AR++F+++P
Sbjct: 21 DSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 80
Query: 257 EPNVFLWNSIVRGYSKHNMFSE 322
P +F WN+I+RGYS++N F +
Sbjct: 81 RPQIFPWNAIIRGYSRNNHFQD 102
>ref|XP_002319950.1| hypothetical protein POPTR_0013s14820g [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| hypothetical protein
POPTR_0013s14820g [Populus trichocarpa]
Length = 746
Score = 104 bits (260), Expect = 1e-20
Identities = 47/85 (55%), Positives = 66/85 (77%)
Frame = +2
Query: 62 NSFDYDSFYASLLDKSTHKSHLRQIHAQILVSGLKESNFLATKFVHVSFNLGEISYARKL 241
++F D FYASL+D S HK+HL QI+A++LV+GL+ FL K V+ + N+GE+S ARKL
Sbjct: 70 STFKPDKFYASLIDDSIHKTHLNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKL 129
Query: 242 FEEIPEPNVFLWNSIVRGYSKHNMF 316
F++ P+P+VFLWN+IVR YS+H F
Sbjct: 130 FDKFPDPDVFLWNAIVRCYSRHGFF 154
>ref|XP_006299513.1| hypothetical protein CARUB_v10015683mg [Capsella rubella]
gi|482568222|gb|EOA32411.1| hypothetical protein
CARUB_v10015683mg [Capsella rubella]
Length = 694
Score = 103 bits (256), Expect = 3e-20
Identities = 43/82 (52%), Positives = 65/82 (79%)
Frame = +2
Query: 77 DSFYASLLDKSTHKSHLRQIHAQILVSGLKESNFLATKFVHVSFNLGEISYARKLFEEIP 256
DSFYASL+D STHK+ LRQIHA++LV GL S FL TK + S + G++++AR++F+++P
Sbjct: 21 DSFYASLIDSSTHKAQLRQIHARLLVLGLHFSGFLITKLIQASSSFGDVTFARQVFDDLP 80
Query: 257 EPNVFLWNSIVRGYSKHNMFSE 322
P +F WN+I+RGYS+++ F +
Sbjct: 81 RPQIFPWNAIIRGYSRNSYFQD 102
>gb|EPS72721.1| hypothetical protein M569_02036 [Genlisea aurea]
Length = 625
Score = 98.2 bits (243), Expect = 1e-18
Identities = 41/82 (50%), Positives = 63/82 (76%)
Frame = +2
Query: 77 DSFYASLLDKSTHKSHLRQIHAQILVSGLKESNFLATKFVHVSFNLGEISYARKLFEEIP 256
+SFYAS++++ TH+SHL QIH QI +G++ + F+ TK ++ ++GEI +ARKLF+ P
Sbjct: 70 ESFYASVVNQCTHRSHLSQIHGQIYSNGMQNNGFIITKLINRCSDIGEIEHARKLFDVFP 129
Query: 257 EPNVFLWNSIVRGYSKHNMFSE 322
+ +FLWN I+RGYSKH+M +E
Sbjct: 130 DKYIFLWNGIIRGYSKHHMLNE 151
>ref|XP_004492095.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cicer arietinum]
Length = 724
Score = 97.8 bits (242), Expect = 1e-18
Identities = 47/89 (52%), Positives = 62/89 (69%)
Frame = +2
Query: 56 HINSFDYDSFYASLLDKSTHKSHLRQIHAQILVSGLKESNFLATKFVHVSFNLGEISYAR 235
H F SFYASL+D STH HL QIH Q++VSGL+ F+ TK V S NLG I YAR
Sbjct: 46 HDPCFKSHSFYASLIDNSTHIRHLNQIHNQLIVSGLQHDRFVMTKLVTESSNLGHIFYAR 105
Query: 236 KLFEEIPEPNVFLWNSIVRGYSKHNMFSE 322
KLF++ P P+ F+ N+I+R YS+++MF +
Sbjct: 106 KLFDKFPIPDCFMLNAIIRSYSRNSMFRD 134
>ref|XP_002522705.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538055|gb|EEF39667.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 501
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/83 (53%), Positives = 62/83 (74%)
Frame = +2
Query: 68 FDYDSFYASLLDKSTHKSHLRQIHAQILVSGLKESNFLATKFVHVSFNLGEISYARKLFE 247
FD +F+ASL+D S ++SHL QIHAQ+ VS L+ + FL TK V+ LGEI YAR +F+
Sbjct: 43 FDPCTFFASLIDNSVNRSHLNQIHAQLFVSRLQYNGFLITKLVNCCATLGEIRYARNVFD 102
Query: 248 EIPEPNVFLWNSIVRGYSKHNMF 316
P+P+VFLWN+I+R Y++ N+F
Sbjct: 103 YYPDPDVFLWNAIIRCYTRQNLF 125
>ref|XP_003621820.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula] gi|355496835|gb|AES78038.1|
Pentatricopeptide repeat-containing protein, partial
[Medicago truncatula]
Length = 114
Score = 92.4 bits (228), Expect = 6e-17
Identities = 41/71 (57%), Positives = 56/71 (78%)
Frame = +2
Query: 68 FDYDSFYASLLDKSTHKSHLRQIHAQILVSGLKESNFLATKFVHVSFNLGEISYARKLFE 247
F SFYASL+D STH +HL Q+H Q+++SGL+ + FL TK V+ S NLG+I YARKLF+
Sbjct: 44 FKSHSFYASLIDNSTHITHLYQVHNQLVLSGLQHNRFLMTKLVNQSSNLGQIFYARKLFD 103
Query: 248 EIPEPNVFLWN 280
E P+P++F+WN
Sbjct: 104 EFPDPDLFMWN 114
>ref|XP_006857627.1| hypothetical protein AMTR_s00061p00127300 [Amborella trichopoda]
gi|548861723|gb|ERN19094.1| hypothetical protein
AMTR_s00061p00127300 [Amborella trichopoda]
Length = 430
Score = 80.1 bits (196), Expect = 3e-13
Identities = 33/79 (41%), Positives = 54/79 (68%)
Frame = +2
Query: 86 YASLLDKSTHKSHLRQIHAQILVSGLKESNFLATKFVHVSFNLGEISYARKLFEEIPEPN 265
Y SL+D S+H HL+QIH L GL+++ F A KF++ E++YA ++F EIP+ +
Sbjct: 133 YTSLVDNSSHIKHLKQIHGHFLSLGLQKTIFFAAKFINACSKFNELNYACQIFSEIPQRS 192
Query: 266 VFLWNSIVRGYSKHNMFSE 322
FLWN+++R YS+H+ + +
Sbjct: 193 SFLWNAMIRSYSQHSYYEK 211
>ref|XP_006299486.1| hypothetical protein CARUB_v10015651mg [Capsella rubella]
gi|482568195|gb|EOA32384.1| hypothetical protein
CARUB_v10015651mg [Capsella rubella]
Length = 534
Score = 78.6 bits (192), Expect = 9e-13
Identities = 32/84 (38%), Positives = 58/84 (69%)
Frame = +2
Query: 71 DYDSFYASLLDKSTHKSHLRQIHAQILVSGLKESNFLATKFVHVSFNLGEISYARKLFEE 250
+ ++ + SLL + ++ L++IHA I++ GL +S+F+ TK V +G++ YA +LF +
Sbjct: 8 EVENCFVSLLQRFRSRNELKKIHASIIIHGLSQSSFMVTKMVDSCDKIGDMEYATRLFNQ 67
Query: 251 IPEPNVFLWNSIVRGYSKHNMFSE 322
+ PNVFL+NSI+R Y+ H+++ E
Sbjct: 68 VSYPNVFLYNSIIRAYTHHSLYCE 91
>ref|XP_007227273.1| hypothetical protein PRUPE_ppa017736mg [Prunus persica]
gi|462424209|gb|EMJ28472.1| hypothetical protein
PRUPE_ppa017736mg [Prunus persica]
Length = 544
Score = 75.1 bits (183), Expect = 1e-11
Identities = 35/82 (42%), Positives = 53/82 (64%)
Frame = +2
Query: 71 DYDSFYASLLDKSTHKSHLRQIHAQILVSGLKESNFLATKFVHVSFNLGEISYARKLFEE 250
+ + F+ L + S L++IHAQI+ L +SNFL TK V V N G + YA LF++
Sbjct: 12 ELEDFFVPTLLNCKNTSGLKKIHAQIVKFSLSQSNFLVTKMVDVCDNSGNLGYASLLFKQ 71
Query: 251 IPEPNVFLWNSIVRGYSKHNMF 316
+ EPNVFL+N+++R Y+ H M+
Sbjct: 72 VLEPNVFLFNAMIRAYTHHQMY 93
>ref|XP_002533229.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526949|gb|EEF29150.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 575
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/76 (44%), Positives = 52/76 (68%)
Frame = +2
Query: 83 FYASLLDKSTHKSHLRQIHAQILVSGLKESNFLATKFVHVSFNLGEISYARKLFEEIPEP 262
F+ +LL+KST SHL Q+HA +L+ GL+ +ATK H FN S+A LF IP+P
Sbjct: 18 FFLNLLNKSTTLSHLTQLHAHLLLHGLQNDIAVATKLTHKLFNFNATSHASALFFTIPKP 77
Query: 263 NVFLWNSIVRGYSKHN 310
++FL+N +++G+S +N
Sbjct: 78 DLFLFNVLIKGFSNNN 93