BLASTX nr result
ID: Cocculus22_contig00031925
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00031925
(312 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006847835.1| hypothetical protein AMTR_s00029p00055730 [A... 64 2e-08
ref|XP_006484519.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
emb|CBI29027.3| unnamed protein product [Vitis vinifera] 61 1e-07
ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera] 61 1e-07
ref|XP_006437608.1| hypothetical protein CICLE_v10031339mg [Citr... 60 4e-07
ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
ref|XP_007043264.1| Pentatricopeptide repeat superfamily protein... 57 2e-06
ref|XP_007203470.1| hypothetical protein PRUPE_ppa024598mg [Prun... 56 6e-06
ref|XP_006653295.1| PREDICTED: pentatricopeptide repeat-containi... 55 8e-06
>ref|XP_006847835.1| hypothetical protein AMTR_s00029p00055730 [Amborella trichopoda]
gi|548851140|gb|ERN09416.1| hypothetical protein
AMTR_s00029p00055730 [Amborella trichopoda]
Length = 122
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/58 (56%), Positives = 40/58 (68%)
Frame = +3
Query: 3 GCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYDIEENG 176
G SSVEV G IH FIAHD+THP S E+YLML+DL Q+KL D +T + D +E G
Sbjct: 69 GFSSVEVDGAIHRFIAHDRTHPCSKEVYLMLNDLGRQIKLQDCLET----VLDTDEEG 122
>ref|XP_006484519.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Citrus sinensis]
Length = 537
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +3
Query: 3 GCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYDIE 167
G S VE+ G +H FIAHD+THP S IY ML+ +A QMKLD + + +E YD++
Sbjct: 481 GWSFVEMSGNLHRFIAHDETHPDSKNIYAMLNFIASQMKLDVDHENQEPCFYDMK 535
>emb|CBI29027.3| unnamed protein product [Vitis vinifera]
Length = 384
Score = 61.2 bits (147), Expect = 1e-07
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = +3
Query: 3 GCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYDIE 167
G S VEV G +H FIAHDKTH +IY+ML+ + QM +D + +T+E G YDIE
Sbjct: 329 GFSFVEVLGTLHRFIAHDKTHNDLEKIYMMLNTIVRQMMVDVDFETQERGFYDIE 383
>ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Vitis vinifera]
Length = 539
Score = 61.2 bits (147), Expect = 1e-07
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = +3
Query: 3 GCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYDIE 167
G S VEV G +H FIAHDKTH +IY+ML+ + QM +D + +T+E G YDIE
Sbjct: 484 GFSFVEVLGTLHRFIAHDKTHNDLEKIYMMLNTIVRQMMVDVDFETQERGFYDIE 538
>emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]
Length = 532
Score = 61.2 bits (147), Expect = 1e-07
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = +3
Query: 3 GCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYDIE 167
G S VEV G +H FIAHDKTH +IY+ML+ + QM +D + +T+E G YDIE
Sbjct: 477 GFSFVEVLGTLHRFIAHDKTHNDLEKIYMMLNTIVRQMMVDVDFETQERGFYDIE 531
>ref|XP_006437608.1| hypothetical protein CICLE_v10031339mg [Citrus clementina]
gi|557539804|gb|ESR50848.1| hypothetical protein
CICLE_v10031339mg [Citrus clementina]
Length = 491
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +3
Query: 3 GCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYDIE 167
G S VE+ G +H FIAHD+THP S IY ML+ + QMKLD + + +E YD++
Sbjct: 435 GWSFVEMSGNLHRFIAHDETHPDSKNIYAMLNFIVSQMKLDVDHENQEPCFYDMK 489
>ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Glycine max]
Length = 548
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = +3
Query: 3 GCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYD 161
G S VE+ G++H FIAHDKTHP S E Y ML+ + QMKL + +E L D
Sbjct: 486 GFSFVEISGVLHRFIAHDKTHPDSEETYFMLNFVVYQMKLSCHEDNQERSLND 538
>ref|XP_007043264.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508707199|gb|EOX99095.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 530
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +3
Query: 3 GCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYDIE 167
G S VE+ G +H F+AHD+THP S +IY ML + QMKLD + +E LY+++
Sbjct: 474 GFSCVEMPGALHSFVAHDETHPNSEDIYTMLKFIVSQMKLDVHKDNQEYLLYEMK 528
>ref|XP_007203470.1| hypothetical protein PRUPE_ppa024598mg [Prunus persica]
gi|462399001|gb|EMJ04669.1| hypothetical protein
PRUPE_ppa024598mg [Prunus persica]
Length = 722
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/56 (44%), Positives = 36/56 (64%)
Frame = +3
Query: 3 GCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYDIEE 170
GCS +EV G++H F+ D +HPQST IY ML D+ E++K + + L DI+E
Sbjct: 589 GCSLIEVDGIVHEFVKGDSSHPQSTHIYEMLQDMIERLKKAGYVPEKSEVLLDIDE 644
>ref|XP_006653295.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Oryza brachyantha]
Length = 603
Score = 55.5 bits (132), Expect = 8e-06
Identities = 26/52 (50%), Positives = 34/52 (65%)
Frame = +3
Query: 3 GCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLY 158
GCS +EV ++H+F+ DKTHP+ EIYLML DL + L E +DGLY
Sbjct: 552 GCSWIEVKDMVHVFLVEDKTHPEREEIYLMLEDLVYNISLCSE---TDDGLY 600