BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00031904
         (338 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006472033.1| PREDICTED: DNA polymerase zeta catalytic sub...    62   1e-07
ref|XP_006472032.1| PREDICTED: DNA polymerase zeta catalytic sub...    62   1e-07
ref|XP_006433339.1| hypothetical protein CICLE_v10003639mg [Citr...    62   1e-07
ref|XP_002319017.2| hypothetical protein POPTR_0013s02320g [Popu...    59   7e-07
ref|XP_002319016.2| hypothetical protein POPTR_0013s02320g [Popu...    59   7e-07
ref|XP_007030809.1| Recovery protein 3 isoform 3 [Theobroma caca...    57   2e-06
ref|XP_007030808.1| Recovery protein 3 isoform 2, partial [Theob...    57   2e-06
ref|XP_007030807.1| Recovery protein 3 isoform 1 [Theobroma caca...    57   2e-06
gb|EXC54611.1| Retrovirus-related Pol polyprotein from transposo...    57   3e-06
gb|EXC02386.1| Retrovirus-related Pol polyprotein from transposo...    57   3e-06
emb|CBI36804.3| unnamed protein product [Vitis vinifera]               57   3e-06
ref|XP_007206444.1| hypothetical protein PRUPE_ppa000111mg [Prun...    55   8e-06

>ref|XP_006472033.1| PREDICTED: DNA polymerase zeta catalytic subunit-like isoform X2
           [Citrus sinensis]
          Length = 1566

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 45/137 (32%), Positives = 65/137 (47%), Gaps = 40/137 (29%)
 Frame = -3

Query: 336 TAIDEVIEEANLDYEHESQKECQDILDSVEALVD-------------------------- 235
           T ID+V+E+AN DYE ESQKECQDILDS+E  V+                          
Sbjct: 249 TTIDKVLEKANTDYERESQKECQDILDSIEDEVNVDGLEERNSSTVDPSNHPETSSNKKI 308

Query: 234 SKISRQGDDDHVI---GHAGNSSEKEV-NRDLEISPQKTPQKS----------KKRLRGS 97
            +I    DD +++   G +GNSS+KE+ +  +     + PQ +          KK+L GS
Sbjct: 309 PQIDGSSDDLYLLPCSGSSGNSSKKEIKSESIRSFQHQVPQDTWTNAASKCNVKKKLWGS 368

Query: 96  STLFTQQMVNNDLESPS 46
                 +  N D+E+ S
Sbjct: 369 LPFSVSEQFNKDIETVS 385


>ref|XP_006472032.1| PREDICTED: DNA polymerase zeta catalytic subunit-like isoform X1
           [Citrus sinensis]
          Length = 1808

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 45/137 (32%), Positives = 65/137 (47%), Gaps = 40/137 (29%)
 Frame = -3

Query: 336 TAIDEVIEEANLDYEHESQKECQDILDSVEALVD-------------------------- 235
           T ID+V+E+AN DYE ESQKECQDILDS+E  V+                          
Sbjct: 491 TTIDKVLEKANTDYERESQKECQDILDSIEDEVNVDGLEERNSSTVDPSNHPETSSNKKI 550

Query: 234 SKISRQGDDDHVI---GHAGNSSEKEV-NRDLEISPQKTPQKS----------KKRLRGS 97
            +I    DD +++   G +GNSS+KE+ +  +     + PQ +          KK+L GS
Sbjct: 551 PQIDGSSDDLYLLPCSGSSGNSSKKEIKSESIRSFQHQVPQDTWTNAASKCNVKKKLWGS 610

Query: 96  STLFTQQMVNNDLESPS 46
                 +  N D+E+ S
Sbjct: 611 LPFSVSEQFNKDIETVS 627


>ref|XP_006433339.1| hypothetical protein CICLE_v10003639mg [Citrus clementina]
           gi|557535461|gb|ESR46579.1| hypothetical protein
           CICLE_v10003639mg [Citrus clementina]
          Length = 1741

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 45/137 (32%), Positives = 65/137 (47%), Gaps = 40/137 (29%)
 Frame = -3

Query: 336 TAIDEVIEEANLDYEHESQKECQDILDSVEALVD-------------------------- 235
           T ID+V+E+AN DYE ESQKECQDILDS+E  V+                          
Sbjct: 453 TTIDKVLEKANTDYERESQKECQDILDSIEDEVNVDGLEERNSSTVDPSNHPETSSNKKI 512

Query: 234 SKISRQGDDDHVI---GHAGNSSEKEV-NRDLEISPQKTPQKS----------KKRLRGS 97
            +I    DD +++   G +GNSS+KE+ +  +     + PQ +          KK+L GS
Sbjct: 513 PQIDGSSDDLYLLPCSGSSGNSSKKEIKSESIRSFQHQVPQDTWTNAASKCNVKKKLWGS 572

Query: 96  STLFTQQMVNNDLESPS 46
                 +  N D+E+ S
Sbjct: 573 LPFSVSEQFNKDIETVS 589


>ref|XP_002319017.2| hypothetical protein POPTR_0013s02320g [Populus trichocarpa]
           gi|550324755|gb|EEE94940.2| hypothetical protein
           POPTR_0013s02320g [Populus trichocarpa]
          Length = 1831

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/57 (52%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
 Frame = -3

Query: 330 IDEVIEEANLDYEHESQKECQDILDSVEALVDSKISRQGDDDHVIGHAGNSS-EKEV 163
           ID+V+E+AN+DYE ESQKECQDILDS+E LV+ ++ ++    H + H+  +S EK+V
Sbjct: 443 IDKVLEKANIDYESESQKECQDILDSIEDLVNFEVFKE-KASHSVDHSPQTSLEKKV 498


>ref|XP_002319016.2| hypothetical protein POPTR_0013s02320g [Populus trichocarpa]
           gi|550324754|gb|EEE94939.2| hypothetical protein
           POPTR_0013s02320g [Populus trichocarpa]
          Length = 1855

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/57 (52%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
 Frame = -3

Query: 330 IDEVIEEANLDYEHESQKECQDILDSVEALVDSKISRQGDDDHVIGHAGNSS-EKEV 163
           ID+V+E+AN+DYE ESQKECQDILDS+E LV+ ++ ++    H + H+  +S EK+V
Sbjct: 443 IDKVLEKANIDYESESQKECQDILDSIEDLVNFEVFKE-KASHSVDHSPQTSLEKKV 498


>ref|XP_007030809.1| Recovery protein 3 isoform 3 [Theobroma cacao]
           gi|590643463|ref|XP_007030810.1| Recovery protein 3
           isoform 3 [Theobroma cacao] gi|508719414|gb|EOY11311.1|
           Recovery protein 3 isoform 3 [Theobroma cacao]
           gi|508719415|gb|EOY11312.1| Recovery protein 3 isoform 3
           [Theobroma cacao]
          Length = 1590

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 45/133 (33%), Positives = 62/133 (46%), Gaps = 32/133 (24%)
 Frame = -3

Query: 336 TAIDEVIEEANLDYEHESQKECQDILDSVEALVD---SKISRQGDDDHV----------- 199
           T ID+V+E+A++DYE ESQKECQDILDSV  L++    K       DH+           
Sbjct: 49  TTIDKVLEKASIDYESESQKECQDILDSVGDLIEFDGLKERNSHSYDHIQISSGKHIPQT 108

Query: 198 ------------IGHAGNSSEKEVNRDLEISPQ------KTPQKSKKRLRGSSTLFTQQM 73
                        G   NSS+ ++  +L+ S Q       T +K KK L GS  L     
Sbjct: 109 DGSSDDLGLSPSAGSVANSSKADMKTELKRSSQDTSKTFSTKRKRKKLLWGSLPLSVTGK 168

Query: 72  VNNDLESPSFTDT 34
             ++ +S SF  T
Sbjct: 169 GKDNSDSVSFNIT 181


>ref|XP_007030808.1| Recovery protein 3 isoform 2, partial [Theobroma cacao]
           gi|508719413|gb|EOY11310.1| Recovery protein 3 isoform
           2, partial [Theobroma cacao]
          Length = 1425

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 45/133 (33%), Positives = 62/133 (46%), Gaps = 32/133 (24%)
 Frame = -3

Query: 336 TAIDEVIEEANLDYEHESQKECQDILDSVEALVD---SKISRQGDDDHV----------- 199
           T ID+V+E+A++DYE ESQKECQDILDSV  L++    K       DH+           
Sbjct: 240 TTIDKVLEKASIDYESESQKECQDILDSVGDLIEFDGLKERNSHSYDHIQISSGKHIPQT 299

Query: 198 ------------IGHAGNSSEKEVNRDLEISPQ------KTPQKSKKRLRGSSTLFTQQM 73
                        G   NSS+ ++  +L+ S Q       T +K KK L GS  L     
Sbjct: 300 DGSSDDLGLSPSAGSVANSSKADMKTELKRSSQDTSKTFSTKRKRKKLLWGSLPLSVTGK 359

Query: 72  VNNDLESPSFTDT 34
             ++ +S SF  T
Sbjct: 360 GKDNSDSVSFNIT 372


>ref|XP_007030807.1| Recovery protein 3 isoform 1 [Theobroma cacao]
           gi|508719412|gb|EOY11309.1| Recovery protein 3 isoform 1
           [Theobroma cacao]
          Length = 2035

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 45/133 (33%), Positives = 62/133 (46%), Gaps = 32/133 (24%)
 Frame = -3

Query: 336 TAIDEVIEEANLDYEHESQKECQDILDSVEALVD---SKISRQGDDDHV----------- 199
           T ID+V+E+A++DYE ESQKECQDILDSV  L++    K       DH+           
Sbjct: 494 TTIDKVLEKASIDYESESQKECQDILDSVGDLIEFDGLKERNSHSYDHIQISSGKHIPQT 553

Query: 198 ------------IGHAGNSSEKEVNRDLEISPQ------KTPQKSKKRLRGSSTLFTQQM 73
                        G   NSS+ ++  +L+ S Q       T +K KK L GS  L     
Sbjct: 554 DGSSDDLGLSPSAGSVANSSKADMKTELKRSSQDTSKTFSTKRKRKKLLWGSLPLSVTGK 613

Query: 72  VNNDLESPSFTDT 34
             ++ +S SF  T
Sbjct: 614 GKDNSDSVSFNIT 626


>gb|EXC54611.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis]
          Length = 1609

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = -3

Query: 336 TAIDEVIEEANLDYEHESQKECQDILDSVEALVDSKISRQGDD 208
           T I+EV+E+AN+DYE ESQKECQDILDSV+  VD K  ++  D
Sbjct: 646 TRIEEVLEKANMDYESESQKECQDILDSVDDFVDFKDIKERAD 688


>gb|EXC02386.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
            notabilis]
          Length = 1854

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = -3

Query: 336  TAIDEVIEEANLDYEHESQKECQDILDSVEALVDSKISRQGDD 208
            T I+EV+E+AN+DYE ESQKECQDILDSV+  VD K  ++  D
Sbjct: 902  TRIEEVLEKANMDYESESQKECQDILDSVDDFVDFKDIKERAD 944


>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
          Length = 1732

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 40/108 (37%), Positives = 56/108 (51%)
 Frame = -3

Query: 330 IDEVIEEANLDYEHESQKECQDILDSVEALVDSKISRQGDDDHVIGHAGNSSEKEVNRDL 151
           ID+V+E+AN+DYE+ESQ+ECQDILDSVE L D K              G       + D 
Sbjct: 462 IDKVLEKANMDYENESQQECQDILDSVEDLADFK--------------GLKERASCSTDH 507

Query: 150 EISPQKTPQKSKKRLRGSSTLFTQQMVNNDLESPSFTDTPNETKPDTQ 7
             SPQ + +K   ++ GS         N+   + S T+  +ETK  +Q
Sbjct: 508 SHSPQTSLEKMIPQVDGSG-----DDPNDCSGNSSETEMKSETKRFSQ 550


>ref|XP_007206444.1| hypothetical protein PRUPE_ppa000111mg [Prunus persica]
           gi|462402086|gb|EMJ07643.1| hypothetical protein
           PRUPE_ppa000111mg [Prunus persica]
          Length = 1771

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/50 (58%), Positives = 35/50 (70%), Gaps = 5/50 (10%)
 Frame = -3

Query: 336 TAIDEVIEEANLDYEHESQKECQDILDSVEALVD-----SKISRQGDDDH 202
           T ID+V+E+AN+DYE ESQKECQDILDSV  L+D      K S   D +H
Sbjct: 452 TTIDKVLEKANVDYETESQKECQDILDSVGDLIDFEGGKEKASYPSDRNH 501