BLASTX nr result
ID: Cocculus22_contig00031872
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00031872
(335 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006432168.1| hypothetical protein CICLE_v10000448mg [Citr... 97 3e-18
emb|CBI38165.3| unnamed protein product [Vitis vinifera] 97 3e-18
ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-18
ref|XP_007204096.1| hypothetical protein PRUPE_ppa002338mg [Prun... 96 5e-18
ref|XP_004237174.1| PREDICTED: pentatricopeptide repeat-containi... 95 1e-17
ref|XP_006359274.1| PREDICTED: pentatricopeptide repeat-containi... 92 6e-17
ref|XP_003602631.1| Pentatricopeptide repeat-containing protein ... 92 6e-17
gb|EXC23679.1| hypothetical protein L484_015589 [Morus notabilis] 92 1e-16
ref|XP_006409682.1| hypothetical protein EUTSA_v10022582mg [Eutr... 92 1e-16
ref|XP_007044258.1| Pentatricopeptide repeat (PPR) superfamily p... 92 1e-16
ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi... 92 1e-16
ref|XP_002310520.1| pentatricopeptide repeat-containing family p... 91 1e-16
ref|XP_004502949.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_002883803.1| pentatricopeptide repeat-containing protein ... 91 2e-16
gb|EYU26180.1| hypothetical protein MIMGU_mgv1a024509mg, partial... 75 3e-16
ref|NP_178983.1| pentatricopeptide repeat-containing protein [Ar... 90 4e-16
ref|XP_006297108.1| hypothetical protein CARUB_v10013108mg [Caps... 89 6e-16
ref|XP_006297107.1| hypothetical protein CARUB_v10013108mg [Caps... 89 6e-16
ref|XP_002306741.1| pentatricopeptide repeat-containing family p... 74 9e-16
ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-15
>ref|XP_006432168.1| hypothetical protein CICLE_v10000448mg [Citrus clementina]
gi|568821173|ref|XP_006465064.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g13600-like [Citrus sinensis]
gi|557534290|gb|ESR45408.1| hypothetical protein
CICLE_v10000448mg [Citrus clementina]
Length = 705
Score = 96.7 bits (239), Expect = 3e-18
Identities = 42/56 (75%), Positives = 51/56 (91%)
Frame = +2
Query: 2 KDYYTCTVDLLGRAGCLDEAKKLIESMPIEPDTVLWGSLLAACRIHRNIEMGIHVA 169
KD+YTC VDLLGRAGCLDEAK LIE+MP++PD V+WGSLLAAC++HRNI +G +VA
Sbjct: 528 KDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVA 583
>emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 96.7 bits (239), Expect = 3e-18
Identities = 42/56 (75%), Positives = 49/56 (87%)
Frame = +2
Query: 2 KDYYTCTVDLLGRAGCLDEAKKLIESMPIEPDTVLWGSLLAACRIHRNIEMGIHVA 169
KD+YTC VDLLGRAGCL+EAK LIE+MP+ PD V+WGSLLAAC++H NIEMG H A
Sbjct: 493 KDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAA 548
>ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 96.7 bits (239), Expect = 3e-18
Identities = 42/56 (75%), Positives = 49/56 (87%)
Frame = +2
Query: 2 KDYYTCTVDLLGRAGCLDEAKKLIESMPIEPDTVLWGSLLAACRIHRNIEMGIHVA 169
KD+YTC VDLLGRAGCL+EAK LIE+MP+ PD V+WGSLLAAC++H NIEMG H A
Sbjct: 523 KDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAA 578
>ref|XP_007204096.1| hypothetical protein PRUPE_ppa002338mg [Prunus persica]
gi|462399627|gb|EMJ05295.1| hypothetical protein
PRUPE_ppa002338mg [Prunus persica]
Length = 685
Score = 95.9 bits (237), Expect = 5e-18
Identities = 42/56 (75%), Positives = 50/56 (89%)
Frame = +2
Query: 2 KDYYTCTVDLLGRAGCLDEAKKLIESMPIEPDTVLWGSLLAACRIHRNIEMGIHVA 169
KD+YTC VDLLGRAGCLDEAK LIE MP++PD V+WGSLLAAC++HRNI +G +VA
Sbjct: 508 KDHYTCMVDLLGRAGCLDEAKHLIEVMPMQPDAVIWGSLLAACKVHRNITLGKYVA 563
>ref|XP_004237174.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Solanum lycopersicum]
Length = 709
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/56 (75%), Positives = 51/56 (91%)
Frame = +2
Query: 2 KDYYTCTVDLLGRAGCLDEAKKLIESMPIEPDTVLWGSLLAACRIHRNIEMGIHVA 169
KD+YTC VDLLG+AGCL+EAK LIESMP+ PD+V+WGSLLAAC+IHR IE+G +VA
Sbjct: 531 KDHYTCMVDLLGKAGCLEEAKDLIESMPMPPDSVVWGSLLAACKIHREIELGKYVA 586
>ref|XP_006359274.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Solanum tuberosum]
Length = 709
Score = 92.4 bits (228), Expect = 6e-17
Identities = 41/56 (73%), Positives = 50/56 (89%)
Frame = +2
Query: 2 KDYYTCTVDLLGRAGCLDEAKKLIESMPIEPDTVLWGSLLAACRIHRNIEMGIHVA 169
KD+YTC VDLLG+AGCL+EAK LIESMP+ PD+V+WGSLLAAC+IH IE+G +VA
Sbjct: 531 KDHYTCMVDLLGKAGCLEEAKDLIESMPMPPDSVVWGSLLAACKIHMEIELGKYVA 586
>ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 705
Score = 92.4 bits (228), Expect = 6e-17
Identities = 40/56 (71%), Positives = 49/56 (87%)
Frame = +2
Query: 2 KDYYTCTVDLLGRAGCLDEAKKLIESMPIEPDTVLWGSLLAACRIHRNIEMGIHVA 169
KD+YTC VDLLGRAGCLDEA LI++MP+EPD V+WGSLLAAC++H NI +G +VA
Sbjct: 528 KDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVA 583
>gb|EXC23679.1| hypothetical protein L484_015589 [Morus notabilis]
Length = 652
Score = 91.7 bits (226), Expect = 1e-16
Identities = 40/56 (71%), Positives = 50/56 (89%)
Frame = +2
Query: 2 KDYYTCTVDLLGRAGCLDEAKKLIESMPIEPDTVLWGSLLAACRIHRNIEMGIHVA 169
KD+YTC VDLLGRAG LDEAK L+ESMP++PD V+WGSLL AC+IHR+I++G +VA
Sbjct: 473 KDHYTCMVDLLGRAGHLDEAKNLVESMPMQPDAVIWGSLLGACKIHRDIDLGKYVA 528
>ref|XP_006409682.1| hypothetical protein EUTSA_v10022582mg [Eutrema salsugineum]
gi|557110844|gb|ESQ51135.1| hypothetical protein
EUTSA_v10022582mg [Eutrema salsugineum]
Length = 687
Score = 91.7 bits (226), Expect = 1e-16
Identities = 38/56 (67%), Positives = 50/56 (89%)
Frame = +2
Query: 2 KDYYTCTVDLLGRAGCLDEAKKLIESMPIEPDTVLWGSLLAACRIHRNIEMGIHVA 169
+D+YTC VDLLGRAG LDEAK +IE MP++PD+V+WGSLLAAC++H+NI +GI+ A
Sbjct: 529 RDHYTCMVDLLGRAGLLDEAKSMIEEMPMQPDSVIWGSLLAACKVHKNITLGIYAA 584
>ref|XP_007044258.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508708193|gb|EOY00090.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 700
Score = 91.7 bits (226), Expect = 1e-16
Identities = 40/56 (71%), Positives = 50/56 (89%)
Frame = +2
Query: 2 KDYYTCTVDLLGRAGCLDEAKKLIESMPIEPDTVLWGSLLAACRIHRNIEMGIHVA 169
KD+YTC VDLLGRAGCL+EAK LIE+MP++PD V+WGSLL AC+IHR+I +G +VA
Sbjct: 528 KDHYTCMVDLLGRAGCLNEAKNLIETMPMKPDAVVWGSLLGACKIHRDITLGKYVA 583
>ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 91.7 bits (226), Expect = 1e-16
Identities = 39/56 (69%), Positives = 50/56 (89%)
Frame = +2
Query: 2 KDYYTCTVDLLGRAGCLDEAKKLIESMPIEPDTVLWGSLLAACRIHRNIEMGIHVA 169
KD++TC VDLLGRAGCLDEA LI++MP++PD V+WGSLLAAC++H NIE+G +VA
Sbjct: 528 KDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVA 583
>ref|XP_002310520.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222853423|gb|EEE90970.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 710
Score = 91.3 bits (225), Expect = 1e-16
Identities = 40/56 (71%), Positives = 49/56 (87%)
Frame = +2
Query: 2 KDYYTCTVDLLGRAGCLDEAKKLIESMPIEPDTVLWGSLLAACRIHRNIEMGIHVA 169
KD+YTC VDLLGRAGCL+EAK LIESMP +PD V+W SLL+AC++HRNI +G +VA
Sbjct: 533 KDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVA 588
>ref|XP_004502949.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cicer arietinum]
Length = 706
Score = 90.5 bits (223), Expect = 2e-16
Identities = 40/56 (71%), Positives = 48/56 (85%)
Frame = +2
Query: 2 KDYYTCTVDLLGRAGCLDEAKKLIESMPIEPDTVLWGSLLAACRIHRNIEMGIHVA 169
KD+YTC VDLLGRAGCLDEA LI++MP+EPD V+WGSLLAAC++H NI +G VA
Sbjct: 528 KDHYTCLVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKCVA 583
>ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297329643|gb|EFH60062.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 697
Score = 90.5 bits (223), Expect = 2e-16
Identities = 38/56 (67%), Positives = 50/56 (89%)
Frame = +2
Query: 2 KDYYTCTVDLLGRAGCLDEAKKLIESMPIEPDTVLWGSLLAACRIHRNIEMGIHVA 169
+D+YTC VDLLGRAG L+EAK +IE MP++PD+V+WGSLLAAC++HRNI +G +VA
Sbjct: 529 RDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVA 584
>gb|EYU26180.1| hypothetical protein MIMGU_mgv1a024509mg, partial [Mimulus
guttatus]
Length = 651
Score = 75.5 bits (184), Expect(2) = 3e-16
Identities = 33/57 (57%), Positives = 44/57 (77%)
Frame = +2
Query: 8 YYTCTVDLLGRAGCLDEAKKLIESMPIEPDTVLWGSLLAACRIHRNIEMGIHVAVGL 178
+Y+C +DLLGRAG L EA +L+ESMPIE D V+WG++ ACR+H+NIE+G A L
Sbjct: 492 HYSCMIDLLGRAGLLKEAIELLESMPIEADAVVWGAMFFACRMHKNIELGERAATRL 548
Score = 35.0 bits (79), Expect(2) = 3e-16
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 151 DGNPCCSWIEINSEVHIFMVKD*SHPQRKRVYDLL 255
D P CS IE++ V+ F+V+D SH + K +Y+ L
Sbjct: 588 DKTPGCSSIEVDGNVYEFIVRDKSHSRSKEIYESL 622
>ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g13600 gi|4558664|gb|AAD22682.1| hypothetical protein
[Arabidopsis thaliana] gi|330251150|gb|AEC06244.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 697
Score = 89.7 bits (221), Expect = 4e-16
Identities = 38/56 (67%), Positives = 50/56 (89%)
Frame = +2
Query: 2 KDYYTCTVDLLGRAGCLDEAKKLIESMPIEPDTVLWGSLLAACRIHRNIEMGIHVA 169
+D+YTC VDLLGRAG L+EAK +IE MP++PD+V+WGSLLAAC++HRNI +G +VA
Sbjct: 529 RDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVA 584
>ref|XP_006297108.1| hypothetical protein CARUB_v10013108mg [Capsella rubella]
gi|482565817|gb|EOA30006.1| hypothetical protein
CARUB_v10013108mg [Capsella rubella]
Length = 691
Score = 89.0 bits (219), Expect = 6e-16
Identities = 37/56 (66%), Positives = 50/56 (89%)
Frame = +2
Query: 2 KDYYTCTVDLLGRAGCLDEAKKLIESMPIEPDTVLWGSLLAACRIHRNIEMGIHVA 169
+D+YTC VDLLGRAG L+EAK ++E MP++PD+V+WGSLLAAC++HRNI +G +VA
Sbjct: 529 RDHYTCMVDLLGRAGFLEEAKSMVEEMPMQPDSVIWGSLLAACKVHRNITIGKYVA 584
>ref|XP_006297107.1| hypothetical protein CARUB_v10013108mg [Capsella rubella]
gi|482565816|gb|EOA30005.1| hypothetical protein
CARUB_v10013108mg [Capsella rubella]
Length = 690
Score = 89.0 bits (219), Expect = 6e-16
Identities = 37/56 (66%), Positives = 50/56 (89%)
Frame = +2
Query: 2 KDYYTCTVDLLGRAGCLDEAKKLIESMPIEPDTVLWGSLLAACRIHRNIEMGIHVA 169
+D+YTC VDLLGRAG L+EAK ++E MP++PD+V+WGSLLAAC++HRNI +G +VA
Sbjct: 529 RDHYTCMVDLLGRAGFLEEAKSMVEEMPMQPDSVIWGSLLAACKVHRNITIGKYVA 584
>ref|XP_002306741.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222856190|gb|EEE93737.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 509
Score = 73.6 bits (179), Expect(2) = 9e-16
Identities = 31/54 (57%), Positives = 44/54 (81%)
Frame = +2
Query: 8 YYTCTVDLLGRAGCLDEAKKLIESMPIEPDTVLWGSLLAACRIHRNIEMGIHVA 169
+Y+C VD+LGRAG L+EA++LI+SMP+ PD ++WGSLL++CR + NIEM A
Sbjct: 368 HYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGNIEMAKQAA 421
Score = 35.4 bits (80), Expect(2) = 9e-16
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +1
Query: 142 KH*DGNPCCSWIEINSEVHIFMVKD*SHPQRKRVYDLL 255
K D P CS IE+N EVH F+ HP+ K +Y L
Sbjct: 461 KQMDKEPGCSLIEVNGEVHEFVAGGRLHPRSKDIYHAL 498
>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product
[Vitis vinifera]
Length = 533
Score = 70.9 bits (172), Expect(2) = 2e-15
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = +2
Query: 8 YYTCTVDLLGRAGCLDEAKKLIESMPIEPDTVLWGSLLAACRIHRNIEMGIHVA 169
+Y+C VD LGRAG L+EA++LI +MP+ PD ++W SLL+ACR H N+E+ A
Sbjct: 396 HYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSACRKHGNVELAKRAA 449
Score = 37.0 bits (84), Expect(2) = 2e-15
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 142 KH*DGNPCCSWIEINSEVHIFMVKD*SHPQRKRVYDLL 255
K + P CS IE+N E+H F+ HPQ + VY LL
Sbjct: 489 KQIEKEPGCSLIEVNGEIHEFVAGGRLHPQAQEVYSLL 526