BLASTX nr result
ID: Cocculus22_contig00031829
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00031829
(284 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22850.3| unnamed protein product [Vitis vinifera] 117 2e-24
ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containi... 117 2e-24
gb|EXB94360.1| hypothetical protein L484_005954 [Morus notabilis] 105 6e-21
ref|XP_002312312.2| hypothetical protein POPTR_0008s10170g, part... 104 1e-20
ref|XP_007035867.1| Pentatricopeptide repeat (PPR) superfamily p... 103 2e-20
ref|XP_002519267.1| pentatricopeptide repeat-containing protein,... 102 7e-20
ref|XP_007224442.1| hypothetical protein PRUPE_ppa022250mg [Prun... 100 2e-19
ref|XP_006488802.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
ref|XP_006419330.1| hypothetical protein CICLE_v10004501mg [Citr... 100 3e-19
gb|EYU43513.1| hypothetical protein MIMGU_mgv1a0224742mg, partia... 97 2e-18
gb|EYU33059.1| hypothetical protein MIMGU_mgv1a021711mg [Mimulus... 97 2e-18
ref|XP_004229098.1| PREDICTED: pentatricopeptide repeat-containi... 96 4e-18
gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays] 96 4e-18
gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays] 96 4e-18
gb|ACN34284.1| unknown [Zea mays] gi|413950072|gb|AFW82721.1| LO... 96 4e-18
ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containi... 95 9e-18
ref|XP_004295051.1| PREDICTED: pentatricopeptide repeat-containi... 95 1e-17
ref|XP_002314968.2| pentatricopeptide repeat-containing family p... 94 1e-17
ref|XP_006842061.1| hypothetical protein AMTR_s00078p00041370 [A... 94 3e-17
ref|XP_006338000.1| PREDICTED: pentatricopeptide repeat-containi... 93 4e-17
>emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 117 bits (293), Expect = 2e-24
Identities = 56/93 (60%), Positives = 66/93 (70%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
FNQAY L+ENM +ENCPPNTVTFN IKGLC SGRVD A++ FD+MGN GC PN TTYNE
Sbjct: 437 FNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNE 496
Query: 99 LLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
LL + K+ +M + IELNLVT+
Sbjct: 497 LLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTY 529
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/94 (28%), Positives = 49/94 (52%)
Frame = -3
Query: 282 TFNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYN 103
TF +A+QL++ M + PN +++ +I L D+G V+L++ +M RGC PN+ T+
Sbjct: 261 TFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFT 320
Query: 102 ELLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
L+ G +G M + + N+V +
Sbjct: 321 SLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAY 354
>ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 117 bits (293), Expect = 2e-24
Identities = 56/93 (60%), Positives = 66/93 (70%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
FNQAY L+ENM +ENCPPNTVTFN IKGLC SGRVD A++ FD+MGN GC PN TTYNE
Sbjct: 437 FNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNE 496
Query: 99 LLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
LL + K+ +M + IELNLVT+
Sbjct: 497 LLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTY 529
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/94 (28%), Positives = 49/94 (52%)
Frame = -3
Query: 282 TFNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYN 103
TF +A+QL++ M + PN +++ +I L D+G V+L++ +M RGC PN+ T+
Sbjct: 261 TFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFT 320
Query: 102 ELLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
L+ G +G M + + N+V +
Sbjct: 321 SLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAY 354
>gb|EXB94360.1| hypothetical protein L484_005954 [Morus notabilis]
Length = 653
Score = 105 bits (262), Expect = 6e-21
Identities = 52/92 (56%), Positives = 62/92 (67%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
F +AY L+ENM E CPPNT+TFN LIKGLC SG V+ A++ DEM GC PN+TTYNE
Sbjct: 428 FKRAYFLIENMNAEGCPPNTITFNTLIKGLCGSGNVEWALKVLDEMRRYGCSPNITTYNE 487
Query: 99 LLAGIQKEGCXXXXXXXXXEMAEKEIELNLVT 4
LL G+ K EM E+E+ELNLVT
Sbjct: 488 LLDGLFKMNRFKDAFGLIREMKEREMELNLVT 519
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/67 (40%), Positives = 37/67 (55%)
Frame = -3
Query: 273 QAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNELL 94
+A +L + M E PN V ++ LI GLC + VD A+ +M GC PNVT Y+ L+
Sbjct: 325 EALELWDRMISEGFQPNVVAYSTLIHGLCSTTNVDKAVSIVHQMERNGCSPNVTIYSTLI 384
Query: 93 AGIQKEG 73
G K G
Sbjct: 385 DGFAKAG 391
>ref|XP_002312312.2| hypothetical protein POPTR_0008s10170g, partial [Populus
trichocarpa] gi|550332772|gb|EEE89679.2| hypothetical
protein POPTR_0008s10170g, partial [Populus trichocarpa]
Length = 204
Score = 104 bits (260), Expect = 1e-20
Identities = 52/93 (55%), Positives = 62/93 (66%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
FN A+ L+ENMA ENCPPNT+T N IKGLC SG+V+ AM+ D+MG GC PNVT YNE
Sbjct: 4 FNHAHHLIENMANENCPPNTITSNTFIKGLCCSGKVEWAMKVLDQMGKYGCSPNVTKYNE 63
Query: 99 LLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
LL G+ E+ E EIELNLVT+
Sbjct: 64 LLDGLFNANRIQEALRIVGEIEEMEIELNLVTY 96
>ref|XP_007035867.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao] gi|508714896|gb|EOY06793.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative [Theobroma cacao]
Length = 664
Score = 103 bits (257), Expect = 2e-20
Identities = 50/93 (53%), Positives = 62/93 (66%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
F+QA+ L+E M LENCPPNTVTFN IKGLC SGRV+ A++ D+MG GC PN+ TYNE
Sbjct: 439 FDQAHSLIEKMVLENCPPNTVTFNTFIKGLCSSGRVEWAVKVLDQMGRYGCAPNIITYNE 498
Query: 99 LLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
LL G+ K E+ EK IE NL ++
Sbjct: 499 LLDGLVKVNRLEQAFGIVREIDEKGIEWNLASY 531
>ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541582|gb|EEF43131.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 665
Score = 102 bits (253), Expect = 7e-20
Identities = 50/93 (53%), Positives = 63/93 (67%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
F+QA+ L+E M+ +NCPPNTVTFN IKGLC SGRV+ A+ F +M GC PN+ TYNE
Sbjct: 440 FSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNE 499
Query: 99 LLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
+L G+ KE EM EK +ELNLVT+
Sbjct: 500 VLDGLLKENRIKEALELVTEMEEKGMELNLVTY 532
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/67 (40%), Positives = 36/67 (53%)
Frame = -3
Query: 273 QAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNELL 94
+A + MA E PN V +N LI GLC G++ A+ +M GC PNV+TY L+
Sbjct: 337 EALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALI 396
Query: 93 AGIQKEG 73
G K G
Sbjct: 397 DGFAKAG 403
Score = 55.5 bits (132), Expect = 8e-06
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Frame = -3
Query: 267 YQLVE----NMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
+Q++E NM + PN T+N L+K LC + RVD A + EM N+GC P+V +Y
Sbjct: 165 FQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTT 224
Query: 99 LLAGIQKEG 73
+++ + K G
Sbjct: 225 VISSMSKLG 233
>ref|XP_007224442.1| hypothetical protein PRUPE_ppa022250mg [Prunus persica]
gi|462421378|gb|EMJ25641.1| hypothetical protein
PRUPE_ppa022250mg [Prunus persica]
Length = 581
Score = 100 bits (250), Expect = 2e-19
Identities = 50/93 (53%), Positives = 61/93 (65%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
F+QA LVENM E CPPNTVTFN IKGLC G+VD A++ D+M GC PN+TTYNE
Sbjct: 356 FHQAQCLVENMTAEGCPPNTVTFNTFIKGLCGDGKVDWAVKMLDKMEKHGCFPNITTYNE 415
Query: 99 LLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
LL G+ K E+ E+ +ELNLVT+
Sbjct: 416 LLDGLFKVNRFEEAFGLVKEIQERGMELNLVTY 448
>ref|XP_006488802.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Citrus sinensis]
Length = 661
Score = 100 bits (248), Expect = 3e-19
Identities = 49/93 (52%), Positives = 62/93 (66%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
F+QA+ L+E MA ENCPPNTVTFN IKGLC GRVD AM+ D+M CLPN+TTYNE
Sbjct: 436 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 495
Query: 99 LLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
LL G+ + E+ + I+LN+VT+
Sbjct: 496 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 528
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
F+ + NM + PN T+N L+K LC + RVD A + EMGN+GC P+ +Y
Sbjct: 161 FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 220
Query: 99 LLAGIQKEG 73
+++ + K G
Sbjct: 221 IVSSMCKLG 229
>ref|XP_006419330.1| hypothetical protein CICLE_v10004501mg [Citrus clementina]
gi|557521203|gb|ESR32570.1| hypothetical protein
CICLE_v10004501mg [Citrus clementina]
Length = 661
Score = 100 bits (248), Expect = 3e-19
Identities = 49/93 (52%), Positives = 62/93 (66%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
F+QA+ L+E MA ENCPPNTVTFN IKGLC GRVD AM+ D+M CLPN+TTYNE
Sbjct: 436 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 495
Query: 99 LLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
LL G+ + E+ + I+LN+VT+
Sbjct: 496 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 528
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
F+ + NM + PN T+N L+K LC + RVD A + EMGN+GC P+ +Y
Sbjct: 161 FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 220
Query: 99 LLAGIQKEG 73
+++ + K G
Sbjct: 221 IVSSMCKLG 229
>gb|EYU43513.1| hypothetical protein MIMGU_mgv1a0224742mg, partial [Mimulus
guttatus]
Length = 589
Score = 97.4 bits (241), Expect = 2e-18
Identities = 48/93 (51%), Positives = 59/93 (63%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
F +AY L+E M E CPPNTVTFN IKGLC GRV+ A+ FDEM GC P+VTTYNE
Sbjct: 410 FEEAYNLIETMVSEKCPPNTVTFNVFIKGLCLKGRVEWAVELFDEMEKHGCGPDVTTYNE 469
Query: 99 LLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
LL G+ K EM ++ ++ NLVT+
Sbjct: 470 LLDGLYKSKNNRLAFELVCEMEKRGVKFNLVTY 502
>gb|EYU33059.1| hypothetical protein MIMGU_mgv1a021711mg [Mimulus guttatus]
Length = 579
Score = 97.4 bits (241), Expect = 2e-18
Identities = 48/93 (51%), Positives = 59/93 (63%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
F +AY L+E M E CPPNTVTFN IKGLC GRV+ A+ FDEM GC P+VTTYNE
Sbjct: 356 FEEAYNLIETMVSEKCPPNTVTFNVFIKGLCLKGRVEWAVELFDEMEKHGCGPDVTTYNE 415
Query: 99 LLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
LL G+ K EM ++ ++ NLVT+
Sbjct: 416 LLDGLYKSKNNRLAFELVCEMEKRGVKFNLVTY 448
>ref|XP_004229098.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Solanum lycopersicum]
Length = 663
Score = 96.3 bits (238), Expect = 4e-18
Identities = 47/93 (50%), Positives = 61/93 (65%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
F QAY L+++M +ENCPPNT+TFN IKGLC SGR++ A+ +++M GC N T+YNE
Sbjct: 439 FEQAYSLLDHMVIENCPPNTITFNTFIKGLCCSGRIEWAVMLYNQMERFGCSGNTTSYNE 498
Query: 99 LLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
LL G+ K EM EK IE NLVT+
Sbjct: 499 LLDGLFKCNNLTVALQLVREMEEKNIEFNLVTY 531
Score = 57.8 bits (138), Expect = 2e-06
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = -3
Query: 273 QAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNELL 94
+A + + M E PN V +NAL+ GLC +G +++A+ + M CLPN TTY+ L+
Sbjct: 336 EALHVWDGMIKEGILPNVVAYNALLHGLCLAGNMNMALSVYSAMETSDCLPNSTTYSTLI 395
Query: 93 AGIQKEG 73
G K G
Sbjct: 396 DGFAKSG 402
>gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 96.3 bits (238), Expect = 4e-18
Identities = 49/93 (52%), Positives = 59/93 (63%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
FNQA L++ M LENCPPNTVTFN LI+ LCD RV A+ F EM GC+PN TYNE
Sbjct: 415 FNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNE 474
Query: 99 LLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
L+ G+ +EG EM IEL+LVT+
Sbjct: 475 LIHGLFREGNCGDALHMVTEMQSHGIELSLVTY 507
>gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 620
Score = 96.3 bits (238), Expect = 4e-18
Identities = 49/93 (52%), Positives = 59/93 (63%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
FNQA L++ M LENCPPNTVTFN LI+ LCD RV A+ F EM GC+PN TYNE
Sbjct: 392 FNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNE 451
Query: 99 LLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
L+ G+ +EG EM IEL+LVT+
Sbjct: 452 LIHGLFREGNCGDALHMVTEMQSHGIELSLVTY 484
>gb|ACN34284.1| unknown [Zea mays] gi|413950072|gb|AFW82721.1| LOW QUALITY PROTEIN:
hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 96.3 bits (238), Expect = 4e-18
Identities = 49/93 (52%), Positives = 59/93 (63%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
FNQA L++ M LENCPPNTVTFN LI+ LCD RV A+ F EM GC+PN TYNE
Sbjct: 419 FNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNE 478
Query: 99 LLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
L+ G+ +EG EM IEL+LVT+
Sbjct: 479 LIHGLFREGNCGDALHMVTEMQSHGIELSLVTY 511
>ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 95.1 bits (235), Expect = 9e-18
Identities = 47/93 (50%), Positives = 60/93 (64%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
F+QAY+L++NMA + CPP VTFN IKGLC GRV AMR D+M GCLP+ TYNE
Sbjct: 439 FDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNE 498
Query: 99 LLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
LL G+ E+ E+++ELNLVT+
Sbjct: 499 LLDGLFSVNELKEACELIRELEERKVELNLVTY 531
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/69 (36%), Positives = 41/69 (59%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
F+ + ENM E PN T+N L+K LC +G++D A + EM RGC+P+ +Y
Sbjct: 161 FHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTT 220
Query: 99 LLAGIQKEG 73
++A + ++G
Sbjct: 221 VVAAMCEDG 229
>ref|XP_004295051.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Fragaria vesca subsp. vesca]
Length = 666
Score = 94.7 bits (234), Expect = 1e-17
Identities = 47/93 (50%), Positives = 61/93 (65%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
FNQA L+ENM E CPPN VTFN IKGLC+ G VD A++ ++M + G LPN+TTYNE
Sbjct: 441 FNQAQCLLENMTAEGCPPNIVTFNTFIKGLCEGGEVDWAVKVLNKMRDNGSLPNITTYNE 500
Query: 99 LLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
LL G+ K E+ +K ++LNLVT+
Sbjct: 501 LLYGLFKVNKFKEAFGLVREIHDKGLKLNLVTY 533
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/68 (39%), Positives = 36/68 (52%)
Frame = -3
Query: 276 NQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNEL 97
++A L M E PN V + +I GLC G + A+ EM +GC PNVTTY+ L
Sbjct: 337 SEALDLWNRMVCEGFEPNVVAYTTVIHGLCSVGNMRKAISVLHEMQKKGCSPNVTTYSTL 396
Query: 96 LAGIQKEG 73
+ G K G
Sbjct: 397 IDGFAKAG 404
>ref|XP_002314968.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550329900|gb|EEF01139.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 662
Score = 94.4 bits (233), Expect = 1e-17
Identities = 47/93 (50%), Positives = 59/93 (63%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
FN A L+ENMA NCPPNT+TFN IKGLC SG+ + AM+ ++M GC PNVTTYNE
Sbjct: 434 FNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNE 493
Query: 99 LLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
+L G+ E+ E EI+ NLVT+
Sbjct: 494 VLDGLFNAKRTREALQIVGEIEEMEIKSNLVTY 526
>ref|XP_006842061.1| hypothetical protein AMTR_s00078p00041370 [Amborella trichopoda]
gi|548844110|gb|ERN03736.1| hypothetical protein
AMTR_s00078p00041370 [Amborella trichopoda]
Length = 661
Score = 93.6 bits (231), Expect = 3e-17
Identities = 45/93 (48%), Positives = 61/93 (65%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
F++A+ L+E+M LE CPPNTVT+N IKGLCD+ RV+ A+ + M GCLP+V TYN
Sbjct: 437 FSKAWDLLESMWLEKCPPNTVTYNTFIKGLCDNDRVECAINVLNSMNREGCLPDVKTYNA 496
Query: 99 LLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
LLAG+ +E EM ++ E NLVT+
Sbjct: 497 LLAGLYRECNFTKALSLMNEMLDRGCEFNLVTY 529
Score = 63.2 bits (152), Expect = 4e-08
Identities = 29/68 (42%), Positives = 37/68 (54%)
Frame = -3
Query: 276 NQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNEL 97
N A + + M L C PN + +N LI GLC +G V A+ EMG C PN TTY+ L
Sbjct: 333 NTALDMWDKMVLGGCLPNIIAYNTLIHGLCSNGNVARAILVLHEMGENNCTPNATTYSAL 392
Query: 96 LAGIQKEG 73
+ G K G
Sbjct: 393 IDGCSKLG 400
Score = 55.5 bits (132), Expect = 8e-06
Identities = 30/83 (36%), Positives = 42/83 (50%)
Frame = -3
Query: 249 MALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNELLAGIQKEGC 70
M + C PN +TF +LIKG+ G V+ A+ +D+M GCLPN+ YN L+ G+ G
Sbjct: 307 MFVRGCEPNIITFASLIKGMFRVGIVNTALDMWDKMVLGGCLPNIIAYNTLIHGLCSNGN 366
Query: 69 XXXXXXXXXEMAEKEIELNLVTH 1
EM E N T+
Sbjct: 367 VARAILVLHEMGENNCTPNATTY 389
>ref|XP_006338000.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Solanum tuberosum]
Length = 663
Score = 92.8 bits (229), Expect = 4e-17
Identities = 46/93 (49%), Positives = 60/93 (64%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
F QAY L+++M +ENCPPNT+TFN IKGLC S R++ A+ +++M GC N TTYNE
Sbjct: 439 FEQAYSLLDDMVIENCPPNTITFNTFIKGLCCSVRIEWAVMLYNQMERFGCSGNTTTYNE 498
Query: 99 LLAGIQKEGCXXXXXXXXXEMAEKEIELNLVTH 1
LL G+ K EM +K IE NLVT+
Sbjct: 499 LLDGLFKCNNLTVALQLVREMEKKNIEFNLVTY 531
Score = 60.5 bits (145), Expect = 2e-07
Identities = 27/67 (40%), Positives = 40/67 (59%)
Frame = -3
Query: 273 QAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNELL 94
+A + + M E PN V +NAL+ GLC +G +++A+ + M GCLPN TTY+ L+
Sbjct: 336 EALHVWDGMIKEGILPNVVAYNALLHGLCLAGNMNMALSVYSAMETSGCLPNSTTYSTLI 395
Query: 93 AGIQKEG 73
G K G
Sbjct: 396 DGFAKSG 402
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = -3
Query: 279 FNQAYQLVENMALENCPPNTVTFNALIKGLCDSGRVDLAMRTFDEMGNRGCLPNVTTYNE 100
F+ + NM + PN T+N L+K LC + RVD AM+ EM N+GC P+ +Y
Sbjct: 164 FHMINPIYSNMKKDGVVPNVYTYNILLKALCKNNRVDGAMKLLVEMSNKGCSPDEVSYTT 223
Query: 99 LLAGIQKEG 73
+++ + K G
Sbjct: 224 IVSSLCKFG 232