BLASTX nr result
ID: Cocculus22_contig00031801
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00031801
(531 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containi... 95 1e-17
ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
emb|CBI34098.3| unnamed protein product [Vitis vinifera] 87 2e-15
emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera] 87 2e-15
ref|XP_006485103.1| PREDICTED: pentatricopeptide repeat-containi... 86 5e-15
ref|XP_006436947.1| hypothetical protein CICLE_v10033858mg, part... 84 2e-14
ref|XP_002321748.2| pentatricopeptide repeat-containing family p... 82 1e-13
ref|XP_007038120.1| Pentatricopeptide repeat superfamily protein... 80 3e-13
ref|XP_007211305.1| hypothetical protein PRUPE_ppa001411mg [Prun... 78 1e-12
ref|XP_004297493.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
emb|CBI28459.3| unnamed protein product [Vitis vinifera] 77 3e-12
ref|XP_006481364.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
ref|XP_006481363.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
ref|XP_006481360.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
ref|XP_006429766.1| hypothetical protein CICLE_v10010938mg [Citr... 74 2e-11
ref|XP_006469440.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-09
ref|XP_002511099.1| pentatricopeptide repeat-containing protein,... 62 8e-08
ref|XP_007049377.1| Pentatricopeptide repeat (PPR) superfamily p... 61 2e-07
ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07
ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07
>ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 94.7 bits (234), Expect = 1e-17
Identities = 47/93 (50%), Positives = 66/93 (70%)
Frame = -1
Query: 531 EALINSLCKKGEFFEALKLVDEMREKGFSLTLTACKNLICTCHAAGNTEEAVQVLRSMVR 352
+ALI +LCKK EFFE LKL++E+ E GF L L C + AGN +EA +VLRSMV+
Sbjct: 918 DALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVK 977
Query: 351 YGWLPDSTSIIDLVNEHQNDGDSDDLRNLERQM 253
+GW+ ++TS+ DLV+ +QN +S+D NL +QM
Sbjct: 978 FGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010
>ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/94 (45%), Positives = 62/94 (65%)
Frame = -1
Query: 531 EALINSLCKKGEFFEALKLVDEMREKGFSLTLTACKNLICTCHAAGNTEEAVQVLRSMVR 352
+ LI +LCK+ + EA KL+DEM E G +L AC L+ + H AG +EA +V +
Sbjct: 842 DLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKS 901
Query: 351 YGWLPDSTSIIDLVNEHQNDGDSDDLRNLERQMV 250
G +PD+T++IDLVN + ND DS+D RNL +Q+V
Sbjct: 902 LGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935
>emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/94 (45%), Positives = 62/94 (65%)
Frame = -1
Query: 531 EALINSLCKKGEFFEALKLVDEMREKGFSLTLTACKNLICTCHAAGNTEEAVQVLRSMVR 352
+ LI +LCK+ + EA KL+DEM E G +L AC L+ + H AG +EA +V +
Sbjct: 625 DLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKS 684
Query: 351 YGWLPDSTSIIDLVNEHQNDGDSDDLRNLERQMV 250
G +PD+T++IDLVN + ND DS+D RNL +Q+V
Sbjct: 685 LGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718
>emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/94 (45%), Positives = 62/94 (65%)
Frame = -1
Query: 531 EALINSLCKKGEFFEALKLVDEMREKGFSLTLTACKNLICTCHAAGNTEEAVQVLRSMVR 352
+ LI +LCK+ + EA KL+DEM E G +L AC L+ + H AG +EA +V +
Sbjct: 931 DLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKS 990
Query: 351 YGWLPDSTSIIDLVNEHQNDGDSDDLRNLERQMV 250
G +PD+T++IDLVN + ND DS+D RNL +Q+V
Sbjct: 991 LGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024
>ref|XP_006485103.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like isoform X1 [Citrus sinensis]
Length = 1030
Score = 85.9 bits (211), Expect = 5e-15
Identities = 39/87 (44%), Positives = 61/87 (70%)
Frame = -1
Query: 528 ALINSLCKKGEFFEALKLVDEMREKGFSLTLTACKNLICTCHAAGNTEEAVQVLRSMVRY 349
+L NSLCK+ EF++ LKL+DEM +K L+ C LI + + AGN ++A + L SM+++
Sbjct: 930 SLANSLCKEEEFYKVLKLLDEMGDKEIKLSHATCCILISSVYEAGNIDKATRFLESMIKF 989
Query: 348 GWLPDSTSIIDLVNEHQNDGDSDDLRN 268
GW+ DST ++DLV + QND +S++ N
Sbjct: 990 GWVADSTVMMDLVKQDQNDANSENASN 1016
>ref|XP_006436947.1| hypothetical protein CICLE_v10033858mg, partial [Citrus clementina]
gi|557539143|gb|ESR50187.1| hypothetical protein
CICLE_v10033858mg, partial [Citrus clementina]
Length = 990
Score = 84.3 bits (207), Expect = 2e-14
Identities = 38/84 (45%), Positives = 60/84 (71%)
Frame = -1
Query: 528 ALINSLCKKGEFFEALKLVDEMREKGFSLTLTACKNLICTCHAAGNTEEAVQVLRSMVRY 349
+L NSLCK+ EF++ LKL+DEM +K L+ C LI + + AGN ++A + L SM+++
Sbjct: 906 SLANSLCKEEEFYKVLKLLDEMGDKEIKLSHATCCILISSVYEAGNIDKATRFLESMIKF 965
Query: 348 GWLPDSTSIIDLVNEHQNDGDSDD 277
GW+ DST ++DLV + QND +S++
Sbjct: 966 GWVADSTVMMDLVKQDQNDANSEN 989
>ref|XP_002321748.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550322507|gb|EEF05875.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 1026
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/94 (40%), Positives = 61/94 (64%)
Frame = -1
Query: 525 LINSLCKKGEFFEALKLVDEMREKGFSLTLTACKNLICTCHAAGNTEEAVQVLRSMVRYG 346
LI+ LC+K E LK+++++ E+G +L+L C L+ H AG + A +VL+SMVR+
Sbjct: 926 LIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFK 985
Query: 345 WLPDSTSIIDLVNEHQNDGDSDDLRNLERQMV*E 244
W+PDST + DL+N Q+ DS++ + +QM E
Sbjct: 986 WVPDSTELNDLINVEQDSTDSENAGDFLKQMAWE 1019
>ref|XP_007038120.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
[Theobroma cacao] gi|590670672|ref|XP_007038121.1|
Pentatricopeptide repeat superfamily protein, putative
isoform 1 [Theobroma cacao] gi|508775365|gb|EOY22621.1|
Pentatricopeptide repeat superfamily protein, putative
isoform 1 [Theobroma cacao] gi|508775366|gb|EOY22622.1|
Pentatricopeptide repeat superfamily protein, putative
isoform 1 [Theobroma cacao]
Length = 1021
Score = 80.1 bits (196), Expect = 3e-13
Identities = 33/91 (36%), Positives = 62/91 (68%)
Frame = -1
Query: 525 LINSLCKKGEFFEALKLVDEMREKGFSLTLTACKNLICTCHAAGNTEEAVQVLRSMVRYG 346
L++++CK+ EF E +K +DEM E+G L+ C L+ + H G+ E+A Q+L S+V++G
Sbjct: 925 LLDAVCKREEFSEVVKFLDEMAEQGLRLSPVTCHKLVRSFHDKGSLEKAEQILESLVQFG 984
Query: 345 WLPDSTSIIDLVNEHQNDGDSDDLRNLERQM 253
W+P+STS+ ++++ +D +S+ N +Q+
Sbjct: 985 WVPNSTSVHSIIHKDHDDANSESPGNFSKQV 1015
>ref|XP_007211305.1| hypothetical protein PRUPE_ppa001411mg [Prunus persica]
gi|462407040|gb|EMJ12504.1| hypothetical protein
PRUPE_ppa001411mg [Prunus persica]
Length = 836
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/83 (40%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Frame = -1
Query: 525 LINSLCKKGEFFEALKLVDEM--REKGFSLTLTACKNLICTCHAAGNTEEAVQVLRSMVR 352
++++ CK+G++ + LKLVDE+ E+GF+L+L C L+ + GN E+A ++L SM+
Sbjct: 751 MVDAYCKEGDWVKCLKLVDEVLVNEQGFALSLATCSTLVRGFYRLGNVEKAARILESMLS 810
Query: 351 YGWLPDSTSIIDLVNEHQNDGDS 283
+GW+ STS+ DL+NE +N+ S
Sbjct: 811 FGWVSQSTSLSDLINEDRNEASS 833
>ref|XP_004297493.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Fragaria vesca subsp. vesca]
Length = 171
Score = 77.0 bits (188), Expect = 3e-12
Identities = 39/85 (45%), Positives = 60/85 (70%), Gaps = 2/85 (2%)
Frame = -1
Query: 531 EALINSLCKKGEFFEALKLVDEMREKGFSLTLTACKNLICTC-HAAGNTEEAVQVLRSMV 355
+AL N++ +K EF E +K +DEM E+GF L+L CK L+ + +GNTE+A ++L SM+
Sbjct: 84 DALANAIFQKAEFSEVMKSLDEMGEQGFVLSLATCKTLVHGFFYKSGNTEKAARILESML 143
Query: 354 RYGWLPDSTSIIDLVN-EHQNDGDS 283
R GW+ +STS+ DL+N E Q++ S
Sbjct: 144 RLGWVSESTSMSDLINDEDQSEASS 168
>emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 6/97 (6%)
Frame = -1
Query: 525 LINSLCKKGEFFEALKLVDEMREKG------FSLTLTACKNLICTCHAAGNTEEAVQVLR 364
+I++ C++G EA KL DE+ KG F L L C + AGN +EA +VLR
Sbjct: 876 MIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLR 935
Query: 363 SMVRYGWLPDSTSIIDLVNEHQNDGDSDDLRNLERQM 253
SMV++GW+ ++TS+ DLV+ +QN +S+D NL +QM
Sbjct: 936 SMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972
>ref|XP_006481364.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like isoform X5 [Citrus sinensis]
Length = 1018
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/83 (38%), Positives = 53/83 (63%)
Frame = -1
Query: 531 EALINSLCKKGEFFEALKLVDEMREKGFSLTLTACKNLICTCHAAGNTEEAVQVLRSMVR 352
++LI++LCKKG+ E KL++EM++ L+ C L+ + H AG +EA ++ RSM+
Sbjct: 925 DSLIDALCKKGDLSEVSKLLEEMKQHEVKPCLSTCSGLLNSFHKAGEIDEAAKIFRSMIN 984
Query: 351 YGWLPDSTSIIDLVNEHQNDGDS 283
GW+PD +S+ + N H D +S
Sbjct: 985 NGWVPDDSSLSESENRHLTDQNS 1007
>ref|XP_006481363.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like isoform X4 [Citrus sinensis]
Length = 1018
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/83 (38%), Positives = 53/83 (63%)
Frame = -1
Query: 531 EALINSLCKKGEFFEALKLVDEMREKGFSLTLTACKNLICTCHAAGNTEEAVQVLRSMVR 352
++LI++LCKKG+ E KL++EM++ L+ C L+ + H AG +EA ++ RSM+
Sbjct: 925 DSLIDALCKKGDLSEVSKLLEEMKQHEVKPCLSTCSGLLNSFHKAGEIDEAAKIFRSMIN 984
Query: 351 YGWLPDSTSIIDLVNEHQNDGDS 283
GW+PD +S+ + N H D +S
Sbjct: 985 NGWVPDDSSLSESENRHLTDQNS 1007
>ref|XP_006481360.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568855538|ref|XP_006481361.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like isoform X2 [Citrus sinensis]
gi|568855540|ref|XP_006481362.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like isoform X3 [Citrus sinensis]
Length = 1181
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/83 (38%), Positives = 53/83 (63%)
Frame = -1
Query: 531 EALINSLCKKGEFFEALKLVDEMREKGFSLTLTACKNLICTCHAAGNTEEAVQVLRSMVR 352
++LI++LCKKG+ E KL++EM++ L+ C L+ + H AG +EA ++ RSM+
Sbjct: 1088 DSLIDALCKKGDLSEVSKLLEEMKQHEVKPCLSTCSGLLNSFHKAGEIDEAAKIFRSMIN 1147
Query: 351 YGWLPDSTSIIDLVNEHQNDGDS 283
GW+PD +S+ + N H D +S
Sbjct: 1148 NGWVPDDSSLSESENRHLTDQNS 1170
>ref|XP_006429766.1| hypothetical protein CICLE_v10010938mg [Citrus clementina]
gi|557531823|gb|ESR43006.1| hypothetical protein
CICLE_v10010938mg [Citrus clementina]
Length = 1181
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/83 (38%), Positives = 53/83 (63%)
Frame = -1
Query: 531 EALINSLCKKGEFFEALKLVDEMREKGFSLTLTACKNLICTCHAAGNTEEAVQVLRSMVR 352
++LI++LCKKG+ E KL++EM++ L+ C L+ + H AG +EA ++ RSM+
Sbjct: 1088 DSLIDALCKKGDLSEVSKLLEEMKQHEVKPCLSTCSGLLNSFHKAGEIDEAAKIFRSMIN 1147
Query: 351 YGWLPDSTSIIDLVNEHQNDGDS 283
GW+PD +S+ + N H D +S
Sbjct: 1148 NGWVPDDSSLSESENRHLTDQNS 1170
>ref|XP_006469440.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Citrus sinensis]
Length = 989
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/92 (34%), Positives = 55/92 (59%)
Frame = -1
Query: 531 EALINSLCKKGEFFEALKLVDEMREKGFSLTLTACKNLICTCHAAGNTEEAVQVLRSMVR 352
+A+I +LCK+ E+ EAL+L++EM E GF L +C+ + G + A +VL M
Sbjct: 896 KAIIKALCKREEYSEALRLLNEMGESGFRLGFASCRTVANDFLREGVMDYAAKVLECMAS 955
Query: 351 YGWLPDSTSIIDLVNEHQNDGDSDDLRNLERQ 256
+GW+ +S S+ D+V + D D+ ++L +Q
Sbjct: 956 FGWVSNSISLADIVKGENSGVDLDESKDLMKQ 987
>ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550214|gb|EEF51701.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1151
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = -1
Query: 525 LINSLCKKGEFFEALKLVDEMREKGFSLTLTACKNLICTCHAAGNTEEAVQVLRSMVR 352
LI++LCK E LK++DE+ ++G L+L C L+C H AG T+EA++VL SMVR
Sbjct: 937 LIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVR 994
>ref|XP_007049377.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
gi|508701638|gb|EOX93534.1| Pentatricopeptide repeat
(PPR) superfamily protein [Theobroma cacao]
Length = 867
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/74 (39%), Positives = 46/74 (62%)
Frame = -1
Query: 528 ALINSLCKKGEFFEALKLVDEMREKGFSLTLTACKNLICTCHAAGNTEEAVQVLRSMVRY 349
ALI +LCK+ +F EAL L++E+ E G SL+ C + AG ++A Q L MV++
Sbjct: 790 ALIEALCKRKDFSEALILLNEVGESGLSLSTATCSFIASNFDRAGEMDKAAQALEHMVQF 849
Query: 348 GWLPDSTSIIDLVN 307
GW+ +S S+ L++
Sbjct: 850 GWVSNSMSLAGLLD 863
>ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = -1
Query: 531 EALINSLCKKGEFFEALKLVDEMREKGFSLTLTACKNLICTCHAAGNTEEAVQVLRSMVR 352
+ALI LCK+ + L+L+ EM ++ SL+ C L+ + +GN +EA +VL M R
Sbjct: 911 DALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQR 970
Query: 351 YGWLPDSTSIIDLVNEHQNDGDSD 280
GW+P S S+ D ++ ++D SD
Sbjct: 971 LGWVPTSLSLTDSISTGRDDMKSD 994
>ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = -1
Query: 531 EALINSLCKKGEFFEALKLVDEMREKGFSLTLTACKNLICTCHAAGNTEEAVQVLRSMVR 352
+ALI LCK+ + L+L+ EM ++ SL+ C L+ + +GN +EA +VL M R
Sbjct: 944 DALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQR 1003
Query: 351 YGWLPDSTSIIDLVNEHQNDGDSD 280
GW+P S S+ D ++ ++D SD
Sbjct: 1004 LGWVPTSLSLTDSISTGRDDMKSD 1027