BLASTX nr result
ID: Cocculus22_contig00031674
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00031674
(316 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002309359.1| pentatricopeptide repeat-containing family p... 114 1e-23
emb|CBI36552.3| unnamed protein product [Vitis vinifera] 113 3e-23
ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containi... 113 3e-23
gb|EXB42930.1| hypothetical protein L484_013952 [Morus notabilis] 112 5e-23
ref|XP_006656718.1| PREDICTED: pentatricopeptide repeat-containi... 112 7e-23
ref|XP_004964651.1| PREDICTED: pentatricopeptide repeat-containi... 112 7e-23
ref|XP_004288724.1| PREDICTED: pentatricopeptide repeat-containi... 112 7e-23
ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group] g... 112 7e-23
gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays] 112 7e-23
gb|EEC80145.1| hypothetical protein OsI_21946 [Oryza sativa Indi... 112 7e-23
ref|XP_007204599.1| hypothetical protein PRUPE_ppa002987mg [Prun... 111 9e-23
ref|XP_004507756.1| PREDICTED: pentatricopeptide repeat-containi... 110 2e-22
ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containi... 109 3e-22
ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containi... 109 3e-22
ref|XP_006474049.1| PREDICTED: pentatricopeptide repeat-containi... 108 6e-22
ref|NP_194799.1| pentatricopeptide repeat-containing protein [Ar... 108 8e-22
ref|XP_007154866.1| hypothetical protein PHAVU_003G154400g [Phas... 108 8e-22
ref|XP_006412675.1| hypothetical protein EUTSA_v10024455mg [Eutr... 108 8e-22
ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 108 8e-22
ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containi... 108 8e-22
>ref|XP_002309359.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222855335|gb|EEE92882.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 605
Score = 114 bits (285), Expect = 1e-23
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = +2
Query: 8 PGTEIRIIKNLRVCLDCHNWTKFISKITQTVIVVRDANRFHHFRDGVCSCGDYW 169
PG EIRIIKNLRVCLDCHNWTKF+SKIT+ VIVVRDANRFHHF+DG+CSCGDYW
Sbjct: 552 PGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKDGLCSCGDYW 605
>emb|CBI36552.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 113 bits (282), Expect = 3e-23
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +2
Query: 2 SIPGTEIRIIKNLRVCLDCHNWTKFISKITQTVIVVRDANRFHHFRDGVCSCGDYW 169
S PGTEIRIIKNLRVCLDCHN TKFISKIT+ VIVVRDANRFHHF+DG+CSCGDYW
Sbjct: 671 SEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 726
>ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 113 bits (282), Expect = 3e-23
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +2
Query: 2 SIPGTEIRIIKNLRVCLDCHNWTKFISKITQTVIVVRDANRFHHFRDGVCSCGDYW 169
S PGTEIRIIKNLRVCLDCHN TKFISKIT+ VIVVRDANRFHHF+DG+CSCGDYW
Sbjct: 726 SEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 781
>gb|EXB42930.1| hypothetical protein L484_013952 [Morus notabilis]
Length = 781
Score = 112 bits (280), Expect = 5e-23
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = +2
Query: 8 PGTEIRIIKNLRVCLDCHNWTKFISKITQTVIVVRDANRFHHFRDGVCSCGDYW 169
PGTEIRI+KNLRVCLDCHN TKFISK+T+ VIVVRDANRFHHF+DGVCSCGDYW
Sbjct: 728 PGTEIRIVKNLRVCLDCHNATKFISKVTERVIVVRDANRFHHFKDGVCSCGDYW 781
>ref|XP_006656718.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Oryza brachyantha]
Length = 672
Score = 112 bits (279), Expect = 7e-23
Identities = 49/54 (90%), Positives = 52/54 (96%)
Frame = +2
Query: 8 PGTEIRIIKNLRVCLDCHNWTKFISKITQTVIVVRDANRFHHFRDGVCSCGDYW 169
PGTEIRIIKNLRVCLDCHN TKFISK+TQ +IVVRDA+RFHHFRDGVCSCGDYW
Sbjct: 619 PGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 672
>ref|XP_004964651.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Setaria italica]
Length = 788
Score = 112 bits (279), Expect = 7e-23
Identities = 49/54 (90%), Positives = 52/54 (96%)
Frame = +2
Query: 8 PGTEIRIIKNLRVCLDCHNWTKFISKITQTVIVVRDANRFHHFRDGVCSCGDYW 169
PGTEIRIIKNLRVCLDCHN TKFISK+TQ +IVVRDA+RFHHFRDGVCSCGDYW
Sbjct: 735 PGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 788
>ref|XP_004288724.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Fragaria vesca subsp. vesca]
Length = 790
Score = 112 bits (279), Expect = 7e-23
Identities = 50/54 (92%), Positives = 51/54 (94%)
Frame = +2
Query: 8 PGTEIRIIKNLRVCLDCHNWTKFISKITQTVIVVRDANRFHHFRDGVCSCGDYW 169
PGTEIRIIKNLRVCLDCHN TKFIS ITQ VIVVRDANRFHHF+DGVCSCGDYW
Sbjct: 737 PGTEIRIIKNLRVCLDCHNATKFISMITQRVIVVRDANRFHHFKDGVCSCGDYW 790
>ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza
sativa Japonica Group] gi|125596288|gb|EAZ36068.1|
hypothetical protein OsJ_20378 [Oryza sativa Japonica
Group]
Length = 787
Score = 112 bits (279), Expect = 7e-23
Identities = 49/54 (90%), Positives = 52/54 (96%)
Frame = +2
Query: 8 PGTEIRIIKNLRVCLDCHNWTKFISKITQTVIVVRDANRFHHFRDGVCSCGDYW 169
PGTEIRIIKNLRVCLDCHN TKFISK+TQ +IVVRDA+RFHHFRDGVCSCGDYW
Sbjct: 734 PGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
>gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 112 bits (279), Expect = 7e-23
Identities = 49/54 (90%), Positives = 52/54 (96%)
Frame = +2
Query: 8 PGTEIRIIKNLRVCLDCHNWTKFISKITQTVIVVRDANRFHHFRDGVCSCGDYW 169
PGTEIRIIKNLRVCLDCHN TKFISK+TQ +IVVRDA+RFHHFRDGVCSCGDYW
Sbjct: 734 PGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
>gb|EEC80145.1| hypothetical protein OsI_21946 [Oryza sativa Indica Group]
Length = 603
Score = 112 bits (279), Expect = 7e-23
Identities = 49/54 (90%), Positives = 52/54 (96%)
Frame = +2
Query: 8 PGTEIRIIKNLRVCLDCHNWTKFISKITQTVIVVRDANRFHHFRDGVCSCGDYW 169
PGTEIRIIKNLRVCLDCHN TKFISK+TQ +IVVRDA+RFHHFRDGVCSCGDYW
Sbjct: 550 PGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 603
>ref|XP_007204599.1| hypothetical protein PRUPE_ppa002987mg [Prunus persica]
gi|462400130|gb|EMJ05798.1| hypothetical protein
PRUPE_ppa002987mg [Prunus persica]
Length = 614
Score = 111 bits (278), Expect = 9e-23
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +2
Query: 8 PGTEIRIIKNLRVCLDCHNWTKFISKITQTVIVVRDANRFHHFRDGVCSCGDYW 169
PGTEIRI KNLRVCLDCHN TKFISKIT+ VIVVRDANRFHHF+DGVCSCGDYW
Sbjct: 561 PGTEIRIFKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGVCSCGDYW 614
>ref|XP_004507756.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cicer arietinum]
Length = 783
Score = 110 bits (275), Expect = 2e-22
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = +2
Query: 8 PGTEIRIIKNLRVCLDCHNWTKFISKITQTVIVVRDANRFHHFRDGVCSCGDYW 169
PGTEIRIIKNLRVCLDCH TKFISKIT+ VIVVRDANRFHHF+DG+CSCGDYW
Sbjct: 730 PGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783
>ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 109 bits (273), Expect = 3e-22
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = +2
Query: 8 PGTEIRIIKNLRVCLDCHNWTKFISKITQTVIVVRDANRFHHFRDGVCSCGDYW 169
PGTEIRIIKNLRVCLDCHN TK ISK+TQ +IVVRDA+RFHHFRDGVCSCGDYW
Sbjct: 743 PGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796
>ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 109 bits (273), Expect = 3e-22
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = +2
Query: 8 PGTEIRIIKNLRVCLDCHNWTKFISKITQTVIVVRDANRFHHFRDGVCSCGDYW 169
PGTEIRIIKNLRVCLDCH TKFISKIT+ VIVVRDANRFHHF+DG+CSCGDYW
Sbjct: 725 PGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 778
>ref|XP_006474049.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Citrus sinensis]
Length = 784
Score = 108 bits (271), Expect = 6e-22
Identities = 48/54 (88%), Positives = 50/54 (92%)
Frame = +2
Query: 8 PGTEIRIIKNLRVCLDCHNWTKFISKITQTVIVVRDANRFHHFRDGVCSCGDYW 169
PGTEIRIIKNLRVCLDCH TKFISK+T VIVVRDANRFHHF+DGVCSCGDYW
Sbjct: 731 PGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 784
>ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis
thaliana] gi|7269971|emb|CAB79788.1| putative protein
[Arabidopsis thaliana] gi|332660398|gb|AEE85798.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 792
Score = 108 bits (270), Expect = 8e-22
Identities = 48/54 (88%), Positives = 50/54 (92%)
Frame = +2
Query: 8 PGTEIRIIKNLRVCLDCHNWTKFISKITQTVIVVRDANRFHHFRDGVCSCGDYW 169
PGTEIRIIKNLRVCLDCH TK ISKIT+ VIVVRDANRFHHF+DGVCSCGDYW
Sbjct: 739 PGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
>ref|XP_007154866.1| hypothetical protein PHAVU_003G154400g [Phaseolus vulgaris]
gi|561028220|gb|ESW26860.1| hypothetical protein
PHAVU_003G154400g [Phaseolus vulgaris]
Length = 778
Score = 108 bits (270), Expect = 8e-22
Identities = 48/54 (88%), Positives = 50/54 (92%)
Frame = +2
Query: 8 PGTEIRIIKNLRVCLDCHNWTKFISKITQTVIVVRDANRFHHFRDGVCSCGDYW 169
PGTEIRIIKNLRVCLDCH TKFISKIT+ VIVVRDANRFHHF+DG CSCGDYW
Sbjct: 725 PGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGSCSCGDYW 778
>ref|XP_006412675.1| hypothetical protein EUTSA_v10024455mg [Eutrema salsugineum]
gi|557113845|gb|ESQ54128.1| hypothetical protein
EUTSA_v10024455mg [Eutrema salsugineum]
Length = 790
Score = 108 bits (270), Expect = 8e-22
Identities = 48/54 (88%), Positives = 50/54 (92%)
Frame = +2
Query: 8 PGTEIRIIKNLRVCLDCHNWTKFISKITQTVIVVRDANRFHHFRDGVCSCGDYW 169
PGTEIRIIKNLRVCLDCH TK ISKIT+ VIVVRDANRFHHF+DGVCSCGDYW
Sbjct: 737 PGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 790
>ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 108 bits (270), Expect = 8e-22
Identities = 47/54 (87%), Positives = 51/54 (94%)
Frame = +2
Query: 8 PGTEIRIIKNLRVCLDCHNWTKFISKITQTVIVVRDANRFHHFRDGVCSCGDYW 169
PGTEIRIIKNLRVCLDCH TKFISKIT+ VIVVRDANRFHHF++G+CSCGDYW
Sbjct: 735 PGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788
>ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 108 bits (270), Expect = 8e-22
Identities = 47/54 (87%), Positives = 51/54 (94%)
Frame = +2
Query: 8 PGTEIRIIKNLRVCLDCHNWTKFISKITQTVIVVRDANRFHHFRDGVCSCGDYW 169
PGTEIRIIKNLRVCLDCH TKFISKIT+ VIVVRDANRFHHF++G+CSCGDYW
Sbjct: 735 PGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788