BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00031549
         (429 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267809.2| PREDICTED: pentatricopeptide repeat-containi...    69   7e-10
emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]    69   7e-10
ref|XP_003626687.1| Pentatricopeptide repeat-containing protein ...    59   9e-07
ref|XP_007204185.1| hypothetical protein PRUPE_ppa015299mg [Prun...    57   3e-06
ref|XP_003595941.1| Pentatricopeptide repeat-containing protein ...    57   3e-06

>ref|XP_002267809.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like [Vitis vinifera]
          Length = 458

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 50/137 (36%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
 Frame = -1

Query: 402 MGKIPPSLKASNLPLTT-LRNPPS-LPNQTSTSSAP-PPSHFSQSKKPKKPQRFSSSSSX 232
           MGKIPPS + S +P+TT L+NPP+ LP Q++    P  P HF     PKK  + S  +  
Sbjct: 69  MGKIPPSFRTSTVPVTTLLKNPPAVLPKQSTVLETPQKPHHF-----PKKRPQPSGKTKK 123

Query: 231 XXXXXXXXXXXXIFNSPNLSDAKRVFXXXXXXXXXXXXLRHHNAXXXXXXXXXXXXXXXX 52
                       IFNSPNL DAK++F             R HNA                
Sbjct: 124 TRTPIEDPKSPVIFNSPNLLDAKKLFASITTTSTTPLDFRFHNALLQSYSSISTVNDSIS 183

Query: 51  XLHSMTKKHSSFSPDRS 1
            L  M K   SFSP+RS
Sbjct: 184 FLRHMIKSQPSFSPERS 200


>emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
          Length = 472

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 51/137 (37%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
 Frame = -1

Query: 402 MGKIPPSLKASNLPLTT-LRNPPS-LPNQTSTSSAP-PPSHFSQSKKPKKPQRFSSSSSX 232
           MGKIPPS + S +P+TT L+NPP+ LP Q++    P  P HF     PKK  + S  +  
Sbjct: 1   MGKIPPSFRTSTVPVTTLLKNPPAVLPKQSTVLETPQKPHHF-----PKKRPQPSGKTKK 55

Query: 231 XXXXXXXXXXXXIFNSPNLSDAKRVFXXXXXXXXXXXXLRHHNAXXXXXXXXXXXXXXXX 52
                       IFNSPNL DAK++F            LR HNA                
Sbjct: 56  TRTPIEDPKSPVIFNSPNLLDAKKLFASITTTSTTPLDLRFHNALLQSYSSISTVNDSIS 115

Query: 51  XLHSMTKKHSSFSPDRS 1
            L  M K   SFSP+RS
Sbjct: 116 FLRHMIKSQPSFSPERS 132


>ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355520709|gb|AET01163.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 501

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 44/136 (32%), Positives = 60/136 (44%), Gaps = 2/136 (1%)
 Frame = -1

Query: 402 MGKIPPSLKASNLPLTTLRNPPSLPNQTST-SSAPPPSHF-SQSKKPKKPQRFSSSSSXX 229
           MGKIPPS +++      L NP  +   +S   S+P P HF ++++KP + Q+ S S S  
Sbjct: 1   MGKIPPSFRSA------LSNPNLIHRSSSLIPSSPKPHHFPNKTRKPHQKQQQSQSQSQS 54

Query: 228 XXXXXXXXXXXIFNSPNLSDAKRVFXXXXXXXXXXXXLRHHNAXXXXXXXXXXXXXXXXX 49
                       F SPNL +AK +F             R HN+                 
Sbjct: 55  PKPVSV------FKSPNLQEAKSIFNSFVNSSNAPIDSRFHNSLLQSYASISTINDSIAF 108

Query: 48  LHSMTKKHSSFSPDRS 1
           L  MTK H SFSPD+S
Sbjct: 109 LRHMTKTHPSFSPDKS 124


>ref|XP_007204185.1| hypothetical protein PRUPE_ppa015299mg [Prunus persica]
           gi|462399716|gb|EMJ05384.1| hypothetical protein
           PRUPE_ppa015299mg [Prunus persica]
          Length = 464

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 45/135 (33%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
 Frame = -1

Query: 402 MGKIPPSLKASNLPLTTLRNPPSL-PNQTSTSSAPPPSHFSQSKKPKKPQRFSSSSSXXX 226
           MGKIPPSL++S +  + ++ P SL PN+   S +  P HF +    K P + S  +    
Sbjct: 1   MGKIPPSLRSS-VSTSLIKKPSSLVPNE---SPSHRPHHFPKKTTKKIPPQLSEKTREPT 56

Query: 225 XXXXXXXXXXIFNSPNLSDAKRVFXXXXXXXXXXXXLRHHNAXXXXXXXXXXXXXXXXXL 46
                      F S NLSDAK+VF            LR HNA                  
Sbjct: 57  FRNP-------FTSANLSDAKKVFNSIVTTTKVPLDLRVHNALLQSYASISTLNDSISLF 109

Query: 45  HSMTKKHSSFSPDRS 1
           + M K H +FSPDRS
Sbjct: 110 NHMIKTHPTFSPDRS 124


>ref|XP_003595941.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484989|gb|AES66192.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 472

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 43/135 (31%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
 Frame = -1

Query: 399 GKIPPSLKASNLPLTTLRNPPSLPNQTST-SSAPPPSHF-SQSKKPKKPQRFSSSSSXXX 226
           GKIPPS +++      L NP  +   +S   S+P P HF ++++KP + Q+ S S S   
Sbjct: 18  GKIPPSFRSA------LSNPNLIHRSSSLIPSSPKPHHFPNKTRKPHQKQQQSQSQSQSP 71

Query: 225 XXXXXXXXXXIFNSPNLSDAKRVFXXXXXXXXXXXXLRHHNAXXXXXXXXXXXXXXXXXL 46
                      F SPNL +AK +F             R HN+                 L
Sbjct: 72  KPVSV------FKSPNLQEAKSIFNSFVNSSNAPIDSRFHNSLLQSYASISTINDSIAFL 125

Query: 45  HSMTKKHSSFSPDRS 1
             MTK H SFSPD+S
Sbjct: 126 RHMTKTHPSFSPDKS 140