BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00031517
         (416 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517667.1| pentatricopeptide repeat-containing protein,...   130   1e-28
ref|XP_006432168.1| hypothetical protein CICLE_v10000448mg [Citr...   125   6e-27
ref|XP_004502949.1| PREDICTED: pentatricopeptide repeat-containi...   125   6e-27
ref|XP_003602631.1| Pentatricopeptide repeat-containing protein ...   123   3e-26
emb|CBI38165.3| unnamed protein product [Vitis vinifera]              114   1e-23
ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23
ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi...   114   2e-23
ref|XP_007204096.1| hypothetical protein PRUPE_ppa002338mg [Prun...   111   1e-22
ref|XP_007044258.1| Pentatricopeptide repeat (PPR) superfamily p...   108   8e-22
ref|XP_007137795.1| hypothetical protein PHAVU_009G156000g [Phas...   107   2e-21
ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21
ref|XP_006409682.1| hypothetical protein EUTSA_v10022582mg [Eutr...   102   7e-20
ref|XP_002883803.1| pentatricopeptide repeat-containing protein ...    97   2e-18
ref|NP_178983.1| pentatricopeptide repeat-containing protein [Ar...    97   3e-18
ref|XP_006297108.1| hypothetical protein CARUB_v10013108mg [Caps...    96   7e-18
ref|XP_006297107.1| hypothetical protein CARUB_v10013108mg [Caps...    96   7e-18
ref|XP_002310520.1| pentatricopeptide repeat-containing family p...    92   6e-17
ref|XP_006359274.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15
ref|XP_004237174.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
ref|XP_004511497.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12

>ref|XP_002517667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543299|gb|EEF44831.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 628

 Score =  130 bits (328), Expect = 1e-28
 Identities = 60/92 (65%), Positives = 74/92 (80%)
 Frame = -2

Query: 277 IRPQVGDLSLLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAK 98
           ++  VGDLS LDS+ FA  L SC+KSKSLRDTRR+H+RIIKT+FA E+FIQNRLID Y K
Sbjct: 7   VKKIVGDLSFLDSSPFAKLLDSCLKSKSLRDTRRIHARIIKTQFAYEVFIQNRLIDAYGK 66

Query: 97  CSCLNDGQKVFDKMPQKNTFSWNSIRGALSKS 2
           C C +D +K+FD+MP+KN FSWN+I   L KS
Sbjct: 67  CGCFDDARKIFDQMPEKNVFSWNAIVSTLVKS 98



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 25/76 (32%), Positives = 48/76 (63%)
 Frame = -2

Query: 250 LLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCLNDGQK 71
           +L+   F   L +C   K L+   ++H  ++K++F  ++++ + LID+Y+KC  ++  Q+
Sbjct: 148 VLNEYTFGSGLSACAGLKDLKIGTQIHGLMLKSQFLLDVYMGSALIDIYSKCGFVDCAQR 207

Query: 70  VFDKMPQKNTFSWNSI 23
           VFD M ++N  SWNS+
Sbjct: 208 VFDGMMERNVVSWNSL 223


>ref|XP_006432168.1| hypothetical protein CICLE_v10000448mg [Citrus clementina]
           gi|568821173|ref|XP_006465064.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g13600-like [Citrus sinensis]
           gi|557534290|gb|ESR45408.1| hypothetical protein
           CICLE_v10000448mg [Citrus clementina]
          Length = 705

 Score =  125 bits (314), Expect = 6e-27
 Identities = 61/93 (65%), Positives = 74/93 (79%)
 Frame = -2

Query: 283 RAIRPQVGDLSLLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVY 104
           R+++  VGDL+ LDS+ FA  L SC++SKS+ DTRRVH+RIIK++FASEIFIQNRLIDVY
Sbjct: 5   RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64

Query: 103 AKCSCLNDGQKVFDKMPQKNTFSWNSIRGALSK 5
           AKC CL   +KVFDKM  KN F+WNSI   L K
Sbjct: 65  AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLK 97



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 24/75 (32%), Positives = 47/75 (62%)
 Frame = -2

Query: 247 LDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCLNDGQKV 68
           L+   F   L +C  S   +   +VH+ + K++++S++++ + LID+Y KC  ++  ++V
Sbjct: 149 LNEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208

Query: 67  FDKMPQKNTFSWNSI 23
           FD M ++N  SWNS+
Sbjct: 209 FDGMRERNIVSWNSL 223


>ref|XP_004502949.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cicer arietinum]
          Length = 706

 Score =  125 bits (314), Expect = 6e-27
 Identities = 57/91 (62%), Positives = 73/91 (80%)
 Frame = -2

Query: 277 IRPQVGDLSLLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAK 98
           +R  VGDLS LDS+ FA  L  C++SKS+ + RRVH+RIIKT+F+SEIFIQNRL+DVY K
Sbjct: 7   VRKVVGDLSFLDSSPFAKLLDCCVRSKSVFEARRVHARIIKTQFSSEIFIQNRLVDVYGK 66

Query: 97  CSCLNDGQKVFDKMPQKNTFSWNSIRGALSK 5
           C CL D +KVFD MP++N FSWN++  AL+K
Sbjct: 67  CGCLEDARKVFDHMPERNIFSWNAVLSALTK 97



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 29/110 (26%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
 Frame = -2

Query: 328 SFLSSYDDDGMARYCRAIRPQVGDLSLL-DSTLFAGFLQSCIKSKSLRDTRRVHSRIIKT 152
           S ++ Y+ +G A     +  ++ +  +  D    A  + +C    ++R+  ++H+R++K 
Sbjct: 222 SLITCYEQNGPAGKALEVFVRMMNFGIEPDEITLASVVSACASLSAIREGLQIHARVMKC 281

Query: 151 -KFASEIFIQNRLIDVYAKCSCLNDGQKVFDKMPQKNTFSWNSIRGALSK 5
            KF +++ + N L+D+YAKC  +N+ + VFD+MP ++  S  S+    +K
Sbjct: 282 DKFRNDLVLGNALVDMYAKCKRVNEARLVFDRMPLRDVVSETSMVSGYAK 331



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
 Frame = -2

Query: 232 FAGFLQSCIKSKSLRDTRRVHSRIIKTKF------ASEIFIQNRLIDVYAKCSCLNDGQK 71
           F   L +C     L+  R+ H++I+K  F       S+IF+ N LID+Y KC  + DG+ 
Sbjct: 388 FGNLLNACANLADLKLGRQAHTQILKHGFWFQFGEDSDIFVGNSLIDMYMKCGLVEDGRV 447

Query: 70  VFDKMPQKNTFSWNSI 23
           VF+ M +++  SWN++
Sbjct: 448 VFEHMVERDIVSWNAM 463


>ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491679|gb|AES72882.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  123 bits (308), Expect = 3e-26
 Identities = 58/91 (63%), Positives = 73/91 (80%)
 Frame = -2

Query: 277 IRPQVGDLSLLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAK 98
           +R  VGDLS LDS+ FA  L +C+KSKS+ + R VH+RIIKT+F+SEIFIQNRL+DVY K
Sbjct: 7   VRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGK 66

Query: 97  CSCLNDGQKVFDKMPQKNTFSWNSIRGALSK 5
           C  L D +KVFD M Q+NTFSWN++ GAL+K
Sbjct: 67  CGFLEDARKVFDHMQQRNTFSWNAVLGALTK 97



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
 Frame = -2

Query: 232 FAGFLQSCIKSKSLRDTRRVHSRIIKTKF------ASEIFIQNRLIDVYAKCSCLNDGQK 71
           F   L +C     L+  R+ H+ I+K  F       S+IF+ N LID+Y KC  + DG+ 
Sbjct: 388 FGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRL 447

Query: 70  VFDKMPQKNTFSWNSI 23
           VF++M +++  SWN++
Sbjct: 448 VFERMLERDNVSWNAM 463



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/111 (25%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
 Frame = -2

Query: 328 SFLSSYDDDGMARYCRAIRPQVGDLSLL-DSTLFAGFLQSCIKSKSLRDTRRVHSRIIK- 155
           S ++ Y+ +G A     +  ++ +  +  D    A    +C    ++R+  ++H+R++K 
Sbjct: 222 SLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKH 281

Query: 154 TKFASEIFIQNRLIDVYAKCSCLNDGQKVFDKMPQKNTFSWNSIRGALSKS 2
            K+ +++ + N L+D+YAKC  +N+ + VFD+MP ++  S  S+    +K+
Sbjct: 282 DKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKA 332


>emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  114 bits (285), Expect = 1e-23
 Identities = 53/88 (60%), Positives = 70/88 (79%)
 Frame = -2

Query: 265 VGDLSLLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCL 86
           V DL L +S+ FA  L SC++S+S R TR VH+RI+ T+F+ EIFIQNRLIDVY KC CL
Sbjct: 7   VRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCL 66

Query: 85  NDGQKVFDKMPQKNTFSWNSIRGALSKS 2
           +D +K+FD+MPQ+NTF+WNS+   L+KS
Sbjct: 67  DDARKLFDRMPQRNTFTWNSLISVLTKS 94



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 32/104 (30%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
 Frame = -2

Query: 328 SFLSSYDDDGMARYCRAIRPQVGDLSLL-DSTLFAGFLQSCIKSKSLRDTRRVHSRIIKT 152
           S ++ Y+ +G A     +  ++ D  L  D    A  + +C    +L++  ++H+R++KT
Sbjct: 218 SLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKT 277

Query: 151 -KFASEIFIQNRLIDVYAKCSCLNDGQKVFDKMPQKNTFSWNSI 23
            KF  ++ + N L+D+YAKCS +N+ ++VFD+M  +N  S  S+
Sbjct: 278 NKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSM 321


>ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  114 bits (285), Expect = 1e-23
 Identities = 53/88 (60%), Positives = 70/88 (79%)
 Frame = -2

Query: 265 VGDLSLLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCL 86
           V DL L +S+ FA  L SC++S+S R TR VH+RI+ T+F+ EIFIQNRLIDVY KC CL
Sbjct: 7   VRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCL 66

Query: 85  NDGQKVFDKMPQKNTFSWNSIRGALSKS 2
           +D +K+FD+MPQ+NTF+WNS+   L+KS
Sbjct: 67  DDARKLFDRMPQRNTFTWNSLISVLTKS 94



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 32/104 (30%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
 Frame = -2

Query: 328 SFLSSYDDDGMARYCRAIRPQVGDLSLL-DSTLFAGFLQSCIKSKSLRDTRRVHSRIIKT 152
           S ++ Y+ +G A     +  ++ D  L  D    A  + +C    +L++  ++H+R++KT
Sbjct: 218 SLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKT 277

Query: 151 -KFASEIFIQNRLIDVYAKCSCLNDGQKVFDKMPQKNTFSWNSI 23
            KF  ++ + N L+D+YAKCS +N+ ++VFD+M  +N  S  S+
Sbjct: 278 NKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSM 321



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
 Frame = -2

Query: 232 FAGFLQSCIKSKSLRDTRRVHSRIIKTKFA------SEIFIQNRLIDVYAKCSCLNDGQK 71
           F   L +C     L   R+ H+ ++K  F       S+IF+ N LID+Y KC  + DG +
Sbjct: 384 FGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSR 443

Query: 70  VFDKMPQKNTFSWNSI 23
           VF+KM +++  SWN+I
Sbjct: 444 VFEKMKERDCVSWNAI 459


>ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  114 bits (284), Expect = 2e-23
 Identities = 52/91 (57%), Positives = 70/91 (76%)
 Frame = -2

Query: 277 IRPQVGDLSLLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAK 98
           ++  VG+L  LDS+ FA  L SC++SKS  D RR+H+RIIKT+F+SEIFIQNRL+D Y K
Sbjct: 7   VQKLVGELCFLDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGK 66

Query: 97  CSCLNDGQKVFDKMPQKNTFSWNSIRGALSK 5
           C    D +KVFD+MPQ+NTFS+N++   L+K
Sbjct: 67  CGYFEDARKVFDRMPQRNTFSYNAVLSVLTK 97



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 29/104 (27%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
 Frame = -2

Query: 328 SFLSSYDDDGMARYCRAIRPQVGDLSLL-DSTLFAGFLQSCIKSKSLRDTRRVHSRIIKT 152
           S ++ Y+ +G A     +   + D  +  D    A  + +C    ++R+  ++H+R++K 
Sbjct: 222 SLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKR 281

Query: 151 -KFASEIFIQNRLIDVYAKCSCLNDGQKVFDKMPQKNTFSWNSI 23
            K+ +++ + N L+D+YAKC  +N+ + VFD+MP +N  S  S+
Sbjct: 282 DKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSM 325



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
 Frame = -2

Query: 232 FAGFLQSCIKSKSLRDTRRVHSRIIKTKF------ASEIFIQNRLIDVYAKCSCLNDGQK 71
           F   L +C     L+  R+ H++I+K  F       S+IF+ N LID+Y KC  + DG  
Sbjct: 388 FGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCL 447

Query: 70  VFDKMPQKNTFSWNSI 23
           VF++M +++  SWN++
Sbjct: 448 VFERMVERDVVSWNAM 463


>ref|XP_007204096.1| hypothetical protein PRUPE_ppa002338mg [Prunus persica]
           gi|462399627|gb|EMJ05295.1| hypothetical protein
           PRUPE_ppa002338mg [Prunus persica]
          Length = 685

 Score =  111 bits (277), Expect = 1e-22
 Identities = 48/72 (66%), Positives = 61/72 (84%)
 Frame = -2

Query: 220 LQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCLNDGQKVFDKMPQKNT 41
           L SCI++KS RD  R+H+R+IKT+F+SEIFIQNRLID Y KC CL+D +K+FDKMPQ+NT
Sbjct: 6   LDSCIRTKSARDAHRIHARVIKTQFSSEIFIQNRLIDAYGKCGCLDDARKLFDKMPQRNT 65

Query: 40  FSWNSIRGALSK 5
           F+WNSI   L+K
Sbjct: 66  FTWNSIISTLTK 77



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 26/76 (34%), Positives = 48/76 (63%)
 Frame = -2

Query: 250 LLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCLNDGQK 71
           +L+   F   L +C   + L+   ++H+ I K+ ++S++++ + LID+Y+KC  +   Q+
Sbjct: 128 VLNEYSFGSALSACAGLRKLKMGVQIHAFIAKSCYSSDVYMGSALIDMYSKCGSVASAQR 187

Query: 70  VFDKMPQKNTFSWNSI 23
           VFD M  +NT SWNS+
Sbjct: 188 VFDWMSDRNTVSWNSL 203


>ref|XP_007044258.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508708193|gb|EOY00090.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 700

 Score =  108 bits (270), Expect = 8e-22
 Identities = 55/87 (63%), Positives = 64/87 (73%)
 Frame = -2

Query: 265 VGDLSLLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCL 86
           VGDLSL DS+ FA  L S I+SKSL D  R+H+RI K+ FASE FI NRLID Y KC  L
Sbjct: 11  VGDLSLPDSSPFAKLLDSYIQSKSLLDVHRLHARITKSNFASETFILNRLIDAYGKCGSL 70

Query: 85  NDGQKVFDKMPQKNTFSWNSIRGALSK 5
            D +KVFD+MPQ+N FSWNS   AL+K
Sbjct: 71  EDARKVFDRMPQRNIFSWNSAITALTK 97



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 34/124 (27%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
 Frame = -2

Query: 358 FDNVNQTFP*SF---LSSYDDDGMARYCRAIRPQVGDLSLL-DSTLFAGFLQSCIKSKSL 191
           FD++NQ    S+   ++ Y+ +G A     +  ++ D  +  D    A  + +C    ++
Sbjct: 209 FDDMNQRNRVSWNSLITCYEQNGPAGVALEVFLRMMDCGIEPDEVTLASVVSACASLSAI 268

Query: 190 RDTRRVHSRIIKT-KFASEIFIQNRLIDVYAKCSCLNDGQKVFDKMPQKNTFSWNSIRGA 14
           ++ +++H+R++K  K   ++ + N L+D+YAKCS +N+ + VFD+MP +N  S  S+   
Sbjct: 269 KEGKQIHARVVKCIKLRDDLVLCNALVDMYAKCSRINEARCVFDRMPVRNVVSETSMVSG 328

Query: 13  LSKS 2
            +K+
Sbjct: 329 YAKA 332



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/75 (33%), Positives = 44/75 (58%)
 Frame = -2

Query: 247 LDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCLNDGQKV 68
           L+   F   L +C   K ++   ++H+ + KT F S++++ + L+D+Y KC  +   Q+ 
Sbjct: 149 LNEYSFGSALSACSGLKDMKMGTQIHALMTKTLFLSDVYMGSALVDMYGKCGSVCCAQRA 208

Query: 67  FDKMPQKNTFSWNSI 23
           FD M Q+N  SWNS+
Sbjct: 209 FDDMNQRNRVSWNSL 223


>ref|XP_007137795.1| hypothetical protein PHAVU_009G156000g [Phaseolus vulgaris]
           gi|561010882|gb|ESW09789.1| hypothetical protein
           PHAVU_009G156000g [Phaseolus vulgaris]
          Length = 705

 Score =  107 bits (267), Expect = 2e-21
 Identities = 51/91 (56%), Positives = 65/91 (71%)
 Frame = -2

Query: 277 IRPQVGDLSLLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAK 98
           ++  VGDL  LDS+ FA  L SCI+SKS  D RR+H RIIK +F+SEIFIQNRL+D Y K
Sbjct: 7   VQKVVGDLCFLDSSPFAKLLDSCIRSKSGIDARRIHCRIIKAQFSSEIFIQNRLVDAYGK 66

Query: 97  CSCLNDGQKVFDKMPQKNTFSWNSIRGALSK 5
           C C  + +KVF  MP +NTFS+N+I    +K
Sbjct: 67  CGCFEEARKVFVHMPLRNTFSYNAILSVFTK 97



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 30/104 (28%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
 Frame = -2

Query: 328 SFLSSYDDDGMARYCRAIRPQVGDLSLL-DSTLFAGFLQSCIKSKSLRDTRRVHSRIIKT 152
           S ++ Y+ +G A+    I  ++ D  +  D    A  + +C    + R+  ++H+R+IK 
Sbjct: 222 SLITCYEQNGPAQKALEIFVRMMDNRVEPDEITMASVVSACASLSATREGLQIHARVIKR 281

Query: 151 -KFASEIFIQNRLIDVYAKCSCLNDGQKVFDKMPQKNTFSWNSI 23
            KF +++ + N L+D+YAKC  + + + VFD+MP ++  S  S+
Sbjct: 282 DKFRNDLVLGNALVDMYAKCKRVREARLVFDRMPVRDVVSETSM 325


>ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
           gi|449523485|ref|XP_004168754.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 687

 Score =  105 bits (263), Expect = 5e-21
 Identities = 51/87 (58%), Positives = 65/87 (74%)
 Frame = -2

Query: 262 GDLSLLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCLN 83
           GDL  LDS+ F+  L  C +S+S RDT RVH+ IIK+ FASE FIQNRLIDVY KC C++
Sbjct: 12  GDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVD 71

Query: 82  DGQKVFDKMPQKNTFSWNSIRGALSKS 2
             +K+FD+M ++N FSWNSI  A +KS
Sbjct: 72  VARKLFDRMLERNIFSWNSIICAFTKS 98


>ref|XP_006409682.1| hypothetical protein EUTSA_v10022582mg [Eutrema salsugineum]
           gi|557110844|gb|ESQ51135.1| hypothetical protein
           EUTSA_v10022582mg [Eutrema salsugineum]
          Length = 687

 Score =  102 bits (253), Expect = 7e-20
 Identities = 52/88 (59%), Positives = 65/88 (73%), Gaps = 2/88 (2%)
 Frame = -2

Query: 262 GDLSLLDSTL-FAGFLQSCIKSK-SLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSC 89
           GDLS  DS+  F+  L SCIKSK S  D R VH+ IIK+ F +E++IQNRLID YAKC  
Sbjct: 11  GDLSFTDSSSPFSKLLDSCIKSKLSPNDVRSVHASIIKSPFFNEVYIQNRLIDAYAKCGS 70

Query: 88  LNDGQKVFDKMPQKNTFSWNSIRGALSK 5
           L DG+KVFDKMP +N ++WNS+  AL+K
Sbjct: 71  LEDGRKVFDKMPDRNVYTWNSLVTALAK 98



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/76 (34%), Positives = 46/76 (60%)
 Frame = -2

Query: 250 LLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCLNDGQK 71
           +L+   FA  L +C     +    ++HS + K+   S++ I + L+D+Y+KC  +ND Q+
Sbjct: 149 VLNEYTFASGLSACSSLNDMNRGIQIHSLVAKSPRLSDVHIGSALVDMYSKCGNVNDAQQ 208

Query: 70  VFDKMPQKNTFSWNSI 23
           VFD+M  +N  +WNS+
Sbjct: 209 VFDEMGDRNVVTWNSL 224


>ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329643|gb|EFH60062.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 697

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 50/88 (56%), Positives = 64/88 (72%), Gaps = 2/88 (2%)
 Frame = -2

Query: 262 GDLSLLD-STLFAGFLQSCIKSK-SLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSC 89
           GDLS    S+ FA  L SCIK K S  D R VH+ +IK+ F++E+FIQNRLID YAKC  
Sbjct: 11  GDLSSFTVSSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGS 70

Query: 88  LNDGQKVFDKMPQKNTFSWNSIRGALSK 5
           L DG+++FDKMPQ+N F+WNS+   L+K
Sbjct: 71  LEDGRQLFDKMPQRNVFTWNSVVTGLTK 98



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 28/76 (36%), Positives = 47/76 (61%)
 Frame = -2

Query: 250 LLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCLNDGQK 71
           +L+   FA  L +C     +    ++HS I K+   S+++I + L+D+Y+KC  +ND Q+
Sbjct: 149 VLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQ 208

Query: 70  VFDKMPQKNTFSWNSI 23
           VFD+M  +N  SWNS+
Sbjct: 209 VFDEMGDRNVVSWNSL 224


>ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g13600 gi|4558664|gb|AAD22682.1| hypothetical protein
           [Arabidopsis thaliana] gi|330251150|gb|AEC06244.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 697

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 48/84 (57%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
 Frame = -2

Query: 253 SLLDSTLFAGFLQSCIKSK-SLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCLNDG 77
           S  DS+ FA  L SCIKSK S    R VH+ +IK+ F++EIFIQNRLID Y+KC  L DG
Sbjct: 15  SFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDG 74

Query: 76  QKVFDKMPQKNTFSWNSIRGALSK 5
           ++VFDKMPQ+N ++WNS+   L+K
Sbjct: 75  RQVFDKMPQRNIYTWNSVVTGLTK 98



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 30/76 (39%), Positives = 48/76 (63%)
 Frame = -2

Query: 250 LLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCLNDGQK 71
           +L+   FA  L +C     +    +VHS I K+ F S+++I + L+D+Y+KC  +ND Q+
Sbjct: 149 VLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQR 208

Query: 70  VFDKMPQKNTFSWNSI 23
           VFD+M  +N  SWNS+
Sbjct: 209 VFDEMGDRNVVSWNSL 224


>ref|XP_006297108.1| hypothetical protein CARUB_v10013108mg [Capsella rubella]
           gi|482565817|gb|EOA30006.1| hypothetical protein
           CARUB_v10013108mg [Capsella rubella]
          Length = 691

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 46/84 (54%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
 Frame = -2

Query: 253 SLLDSTLFAGFLQSCIKSK-SLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCLNDG 77
           SL DS+ FA  L SCI++K S  D R VH+ I+K+ F +E FIQNRLID Y KC  L+DG
Sbjct: 15  SLTDSSPFAKLLDSCIRTKLSATDVRCVHACILKSGFKNETFIQNRLIDAYGKCGSLDDG 74

Query: 76  QKVFDKMPQKNTFSWNSIRGALSK 5
           ++VFD+MP++N ++WNS+  AL+K
Sbjct: 75  RQVFDEMPERNVYTWNSVLTALTK 98



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 27/76 (35%), Positives = 47/76 (61%)
 Frame = -2

Query: 250 LLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCLNDGQK 71
           +L+   FA  L +C     +    ++HS I K+   S+++I + L+D+Y+KC  ++D Q+
Sbjct: 149 VLNEYSFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGDVDDAQR 208

Query: 70  VFDKMPQKNTFSWNSI 23
           VFD+M  +N  SWNS+
Sbjct: 209 VFDEMGDRNVVSWNSL 224



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
 Frame = -2

Query: 232 FAGFLQSCIKSKSLRDTRRVHSRIIKTKFA------SEIFIQNRLIDVYAKCSCLNDGQK 71
           FA  L++C     L    + H  ++K  F       ++IF+ N LID+Y KC C+ DG  
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEADIFVGNSLIDMYVKCGCVEDGYL 448

Query: 70  VFDKMPQKNTFSWNSI 23
           VF KM +++  SWN++
Sbjct: 449 VFRKMMERDCVSWNAM 464


>ref|XP_006297107.1| hypothetical protein CARUB_v10013108mg [Capsella rubella]
           gi|482565816|gb|EOA30005.1| hypothetical protein
           CARUB_v10013108mg [Capsella rubella]
          Length = 690

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 46/84 (54%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
 Frame = -2

Query: 253 SLLDSTLFAGFLQSCIKSK-SLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCLNDG 77
           SL DS+ FA  L SCI++K S  D R VH+ I+K+ F +E FIQNRLID Y KC  L+DG
Sbjct: 15  SLTDSSPFAKLLDSCIRTKLSATDVRCVHACILKSGFKNETFIQNRLIDAYGKCGSLDDG 74

Query: 76  QKVFDKMPQKNTFSWNSIRGALSK 5
           ++VFD+MP++N ++WNS+  AL+K
Sbjct: 75  RQVFDEMPERNVYTWNSVLTALTK 98



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 27/76 (35%), Positives = 47/76 (61%)
 Frame = -2

Query: 250 LLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCLNDGQK 71
           +L+   FA  L +C     +    ++HS I K+   S+++I + L+D+Y+KC  ++D Q+
Sbjct: 149 VLNEYSFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGDVDDAQR 208

Query: 70  VFDKMPQKNTFSWNSI 23
           VFD+M  +N  SWNS+
Sbjct: 209 VFDEMGDRNVVSWNSL 224



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
 Frame = -2

Query: 232 FAGFLQSCIKSKSLRDTRRVHSRIIKTKFA------SEIFIQNRLIDVYAKCSCLNDGQK 71
           FA  L++C     L    + H  ++K  F       ++IF+ N LID+Y KC C+ DG  
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEADIFVGNSLIDMYVKCGCVEDGYL 448

Query: 70  VFDKMPQKNTFSWNSI 23
           VF KM +++  SWN++
Sbjct: 449 VFRKMMERDCVSWNAM 464


>ref|XP_002310520.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222853423|gb|EEE90970.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 710

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 44/86 (51%), Positives = 58/86 (67%)
 Frame = -2

Query: 262 GDLSLLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCLN 83
           G +   DS+ FA  L  C+K +S RD R VH R+I+T F  E+FIQNRLIDVY KC  L+
Sbjct: 17  GGIFFTDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLD 76

Query: 82  DGQKVFDKMPQKNTFSWNSIRGALSK 5
             +KVFD+M ++N FS+NSI   L +
Sbjct: 77  YARKVFDRMSERNVFSFNSIISTLMR 102



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 26/76 (34%), Positives = 46/76 (60%)
 Frame = -2

Query: 250 LLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCLNDGQK 71
           +L+   F   L +C + K L+   ++H  I K+K++ ++F+ + LID Y+KC  +   ++
Sbjct: 153 VLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARR 212

Query: 70  VFDKMPQKNTFSWNSI 23
           VFD M +KN  SWN +
Sbjct: 213 VFDGMEEKNVVSWNCL 228



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/82 (30%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
 Frame = -2

Query: 244 DSTLFAGFLQSCIKSKSLRDTRRVHSRIIKT-KFASEIFIQNRLIDVYAKCSCLNDGQKV 68
           D    A  + +C    + ++  ++H+R++K+ KF +++ + N L+D+YAKC  +N+ + V
Sbjct: 256 DEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCV 315

Query: 67  FDKMPQKNTFSWNSIRGALSKS 2
           FD+MP +N  S  ++    +KS
Sbjct: 316 FDRMPVRNAVSETTMVSGYAKS 337


>ref|XP_006359274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Solanum tuberosum]
          Length = 709

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 45/84 (53%), Positives = 57/84 (67%)
 Frame = -2

Query: 253 SLLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCLNDGQ 74
           SL +ST FA  L S I SKS    + VH RI+KT F+SE+FI N+LID Y K   L   +
Sbjct: 18  SLPNSTPFAKILDSYINSKSQYVIQTVHCRILKTHFSSEVFINNKLIDTYGKSGMLKYAK 77

Query: 73  KVFDKMPQKNTFSWNSIRGALSKS 2
           KVFDKMP++NTF+WNS+  A + S
Sbjct: 78  KVFDKMPERNTFTWNSMINAYTAS 101


>ref|XP_004237174.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Solanum lycopersicum]
          Length = 709

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 41/84 (48%), Positives = 56/84 (66%)
 Frame = -2

Query: 253 SLLDSTLFAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCLNDGQ 74
           +L +ST FA  L S I +KS    + VH R++KT F+SE+FI N+LID Y K   L   +
Sbjct: 18  TLSNSTPFAKILDSYINTKSQYVIQTVHCRVLKTHFSSEVFINNKLIDTYGKSGVLKYAK 77

Query: 73  KVFDKMPQKNTFSWNSIRGALSKS 2
            VFDKMP++NTF+WNS+  A + S
Sbjct: 78  NVFDKMPERNTFTWNSMMNAYTAS 101


>ref|XP_004511497.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Cicer arietinum]
          Length = 769

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 36/76 (47%), Positives = 50/76 (65%)
 Frame = -2

Query: 229 AGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCLNDGQKVFDKMPQ 50
           A  LQSCI +KSL   + VH+RI +    S+ F+ N LI++Y+KC+ ++    VFDK+P 
Sbjct: 9   ANLLQSCITNKSLLPAKIVHARIFRFNLFSDTFLSNTLIELYSKCNLISFAHHVFDKIPH 68

Query: 49  KNTFSWNSIRGALSKS 2
           KN FSWN+I  A  KS
Sbjct: 69  KNIFSWNAILAAYCKS 84



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 24/70 (34%), Positives = 41/70 (58%)
 Frame = -2

Query: 232 FAGFLQSCIKSKSLRDTRRVHSRIIKTKFASEIFIQNRLIDVYAKCSCLNDGQKVFDKMP 53
           F+    SC K  SL   +++H++IIK  +  ++F+ + LI++Y KC  +   +  FD MP
Sbjct: 526 FSTAASSCAKLSSLFQGQQIHAQIIKDGYVDDVFVGSSLIEMYCKCGNVGAARCYFDMMP 585

Query: 52  QKNTFSWNSI 23
            KN  +WN +
Sbjct: 586 GKNIVTWNEM 595