BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00031367
         (321 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]             62   1e-07
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain...    62   1e-07
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]...    62   1e-07

>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
          Length = 1886

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/59 (50%), Positives = 42/59 (71%)
 Frame = -1

Query: 321  CFECGQPGHYTKNCPHKKKSRHQQLIHQIQESYPLPDDHDLESLFSEEDEQSPDTLFAV 145
            CF CG+ GH+++NCP  KKS   +LI +IQ+   +  + DLES+FS EDE S DTLF++
Sbjct: 1113 CFTCGKIGHFSRNCPQNKKS--IKLISEIQKYTGIDIEDDLESVFSIEDEPSEDTLFSL 1169


>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
            protein; Short=MP; Contains: RecName: Full=Capsid
            protein; Short=CP; Contains: RecName: Full=Aspartic
            protease; Short=PR; Contains: RecName: Full=Reverse
            transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
            polyprotein 1 [Petunia vein clearing virus]
          Length = 2180

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/59 (50%), Positives = 42/59 (71%)
 Frame = -1

Query: 321  CFECGQPGHYTKNCPHKKKSRHQQLIHQIQESYPLPDDHDLESLFSEEDEQSPDTLFAV 145
            CF CG+ GH+++NCP  KKS   +LI +IQ+   +  + DLES+FS EDE S DTLF++
Sbjct: 1113 CFTCGKIGHFSRNCPQNKKS--IKLISEIQKYTGIDIEDDLESVFSIEDEPSEDTLFSL 1169


>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
            gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
            polyprotein; Contains: RecName: Full=Movement protein;
            Short=MP; Contains: RecName: Full=Capsid protein;
            Short=CP; Contains: RecName: Full=Aspartic protease;
            Short=PR; Contains: RecName: Full=Reverse transcriptase;
            Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
            [petunia vein clearing virus]
          Length = 2179

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/59 (50%), Positives = 42/59 (71%)
 Frame = -1

Query: 321  CFECGQPGHYTKNCPHKKKSRHQQLIHQIQESYPLPDDHDLESLFSEEDEQSPDTLFAV 145
            CF CG+ GH+++NCP  KKS   +LI +IQ+   +  + DLES+FS EDE S DTLF++
Sbjct: 1112 CFTCGKIGHFSRNCPQNKKS--IKLISEIQKYTGIDIEDDLESVFSIEDEPSEDTLFSL 1168