BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00031284
         (327 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266...    86   4e-15
ref|XP_006364902.1| PREDICTED: mediator of RNA polymerase II tra...    86   5e-15
ref|XP_004251571.1| PREDICTED: mediator of RNA polymerase II tra...    86   5e-15
ref|NP_001067381.1| Os12g0638600 [Oryza sativa Japonica Group] g...    80   3e-13
gb|EEE53678.1| hypothetical protein OsJ_37013 [Oryza sativa Japo...    80   3e-13
ref|XP_006664786.1| PREDICTED: mediator of RNA polymerase II tra...    78   1e-12
ref|XP_007204608.1| hypothetical protein PRUPE_ppa002594mg [Prun...    74   2e-11
ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II tra...    74   2e-11
gb|EXB54541.1| hypothetical protein L484_006289 [Morus notabilis]      72   1e-10
ref|XP_004300164.1| PREDICTED: mediator of RNA polymerase II tra...    70   4e-10
gb|EYU29301.1| hypothetical protein MIMGU_mgv1a002570mg [Mimulus...    69   7e-10
ref|XP_006400585.1| hypothetical protein EUTSA_v10012923mg [Eutr...    68   2e-09
ref|XP_003525658.1| PREDICTED: mediator of RNA polymerase II tra...    67   2e-09
gb|EMT20869.1| hypothetical protein F775_22791 [Aegilops tauschii]     67   3e-09
ref|XP_003549778.1| PREDICTED: mediator of RNA polymerase II tra...    67   3e-09
ref|XP_006450970.1| hypothetical protein CICLE_v10007689mg [Citr...    67   3e-09
ref|XP_006286416.1| hypothetical protein CARUB_v10002972mg [Caps...    67   3e-09
ref|XP_006475818.1| PREDICTED: mediator of RNA polymerase II tra...    66   4e-09
ref|XP_003569428.1| PREDICTED: uncharacterized protein LOC100822...    66   6e-09
ref|NP_197517.3| RNA polymerase II transcription mediator [Arabi...    66   6e-09

>ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266409 [Vitis vinifera]
           gi|147821405|emb|CAN63500.1| hypothetical protein
           VITISV_011675 [Vitis vinifera]
           gi|297738929|emb|CBI28174.3| unnamed protein product
           [Vitis vinifera]
          Length = 660

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 44/71 (61%), Positives = 55/71 (77%), Gaps = 3/71 (4%)
 Frame = +1

Query: 25  PSPVGFEIYLQQIFHENVLVKLQDRRPSAGRTQRTSG---DGFDLLGHFCKILAHRIFSS 195
           P+ +  EIYL+Q+FHE+V V+ +D+  SAGRTQ +S    DGF LLGHFC  LAHRIFSS
Sbjct: 377 PNRISSEIYLKQLFHEHVFVRAKDKHISAGRTQPSSQPAKDGFGLLGHFCMSLAHRIFSS 436

Query: 196 KVLAQLESLVS 228
           KVL +LE+LVS
Sbjct: 437 KVLMELENLVS 447


>ref|XP_006364902.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Solanum tuberosum]
          Length = 663

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 45/76 (59%), Positives = 58/76 (76%), Gaps = 3/76 (3%)
 Frame = +1

Query: 10  KELPGPSPVGFEIYLQQIFHENVLVKLQDRRPSAGRTQRTSG---DGFDLLGHFCKILAH 180
           K+L  P+ + FEIYLQQ+FHE+V +K ++R  S G+ Q +S    DG +LLGHFC  LAH
Sbjct: 379 KKLGFPNRISFEIYLQQLFHEHVFIKAKNRLSSLGKPQLSSQPVKDGPNLLGHFCVSLAH 438

Query: 181 RIFSSKVLAQLESLVS 228
           RIFS+KVLA+LESLVS
Sbjct: 439 RIFSNKVLAELESLVS 454


>ref|XP_004251571.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Solanum lycopersicum]
          Length = 663

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 3/77 (3%)
 Frame = +1

Query: 7   LKELPGPSPVGFEIYLQQIFHENVLVKLQDRRPSAGRTQRTSG---DGFDLLGHFCKILA 177
           LK+L  P+ + FEIYLQQ+FHE+V +K ++R  S G+ + +S    DG +LLGHFC  LA
Sbjct: 378 LKKLGFPNRISFEIYLQQLFHEHVFIKAKNRLSSLGKPEISSQPVKDGPNLLGHFCVSLA 437

Query: 178 HRIFSSKVLAQLESLVS 228
           HRIFS+KVLA+LESLVS
Sbjct: 438 HRIFSNKVLAELESLVS 454


>ref|NP_001067381.1| Os12g0638600 [Oryza sativa Japonica Group]
           gi|77556810|gb|ABA99606.1| expressed protein [Oryza
           sativa Japonica Group] gi|113649888|dbj|BAF30400.1|
           Os12g0638600 [Oryza sativa Japonica Group]
           gi|215694565|dbj|BAG89558.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218187319|gb|EEC69746.1| hypothetical protein
           OsI_39278 [Oryza sativa Indica Group]
          Length = 655

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 45/102 (44%), Positives = 64/102 (62%), Gaps = 11/102 (10%)
 Frame = +1

Query: 10  KELPG-PSPVGFEIYLQQIFHENVLVKLQDRRPSAGRTQ---RTSGDGFDLLGHFCKILA 177
           K++ G P+P   EIYL Q+FHEN+L K++++  + GR Q   + +GD + LLGHFC  +A
Sbjct: 369 KDVTGFPNPRSLEIYLLQLFHENILRKVREKSLNIGRYQSPAQVAGDDYGLLGHFCLTVA 428

Query: 178 HRIFSSKVLAQLESLVSF*SLI-------VHL*NGIWSFCIK 282
           HRIFS+KVL +LES+VS    +        H     WS C+K
Sbjct: 429 HRIFSNKVLVELESVVSRVPYLHLRSLPTWHSRTSSWSLCLK 470


>gb|EEE53678.1| hypothetical protein OsJ_37013 [Oryza sativa Japonica Group]
          Length = 655

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 45/102 (44%), Positives = 64/102 (62%), Gaps = 11/102 (10%)
 Frame = +1

Query: 10  KELPG-PSPVGFEIYLQQIFHENVLVKLQDRRPSAGRTQ---RTSGDGFDLLGHFCKILA 177
           K++ G P+P   EIYL Q+FHEN+L K++++  + GR Q   + +GD + LLGHFC  +A
Sbjct: 369 KDVTGFPNPRSLEIYLLQLFHENILRKVREKSLNIGRYQSPAQVAGDDYGLLGHFCLTVA 428

Query: 178 HRIFSSKVLAQLESLVSF*SLI-------VHL*NGIWSFCIK 282
           HRIFS+KVL +LES+VS    +        H     WS C+K
Sbjct: 429 HRIFSNKVLVELESVVSRVPYLHLRSLPTWHSRTSSWSLCLK 470


>ref|XP_006664786.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Oryza brachyantha]
          Length = 583

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 10/96 (10%)
 Frame = +1

Query: 25  PSPVGFEIYLQQIFHENVLVKLQDRRPSAGRTQ---RTSGDGFDLLGHFCKILAHRIFSS 195
           P+P   EIYL Q+FH N+L K++++  + GR Q   + +GD + LLGHFC  +AHRIFS+
Sbjct: 303 PNPRSLEIYLLQLFHANILRKVREKSLNVGRYQSPAQVAGDDYGLLGHFCMTVAHRIFSN 362

Query: 196 KVLAQLESLVSF*SLI-------VHL*NGIWSFCIK 282
           KVL +LES+VS    +        H     WS C+K
Sbjct: 363 KVLLELESVVSGVPYLHLRSLPTWHSRTSSWSLCLK 398


>ref|XP_007204608.1| hypothetical protein PRUPE_ppa002594mg [Prunus persica]
           gi|462400139|gb|EMJ05807.1| hypothetical protein
           PRUPE_ppa002594mg [Prunus persica]
          Length = 654

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 41/71 (57%), Positives = 50/71 (70%), Gaps = 4/71 (5%)
 Frame = +1

Query: 25  PSPVGFEIYLQQIFHENVLVKLQDRRPSAGRTQRTSG----DGFDLLGHFCKILAHRIFS 192
           P  +  EIYLQQIFH++V VK +DR  SAG   R SG    +G  LLGHFC  LAHRIFS
Sbjct: 374 PDQISCEIYLQQIFHQHVFVKAKDRPTSAGA--RVSGQLAKEGPGLLGHFCMSLAHRIFS 431

Query: 193 SKVLAQLESLV 225
           +KVL +LE++V
Sbjct: 432 NKVLKELENVV 442


>ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Cucumis sativus]
           gi|449481525|ref|XP_004156208.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 17-like [Cucumis
           sativus]
          Length = 662

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 5/85 (5%)
 Frame = +1

Query: 10  KELPGPSPVGFEIYLQQIFHENVLVKLQDRRPSAGRTQ--RTSGDGFDLLGHFCKILAHR 183
           K+L  P+ + FEIYLQQIFHE V VK  DR  S+   Q  + S DG  LLGHFC  LAHR
Sbjct: 373 KKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHR 432

Query: 184 IFSSKVLAQLESL---VSF*SLIVH 249
           +F++ VL +LE++   V F  LI H
Sbjct: 433 MFANNVLMELENVVWKVPFLQLISH 457


>gb|EXB54541.1| hypothetical protein L484_006289 [Morus notabilis]
          Length = 701

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
 Frame = +1

Query: 10  KELPGPSPVGFEIYLQQIFHENVLVKLQDRRPSAGRTQRTSG----DGFDLLGHFCKILA 177
           KEL  P  +  EIYLQQ+FHE+V  + +D+  S     R SG    +G  LLGHFC  LA
Sbjct: 372 KELGTPDYISCEIYLQQLFHEHVFSRAKDKPVST--VSRVSGQPAKEGPSLLGHFCLSLA 429

Query: 178 HRIFSSKVLAQLESLVSF*SLIVHL*NGIWS 270
           HRIFS KVL  LE+LVS  S +  L +  W+
Sbjct: 430 HRIFSKKVLVVLENLVSGVSYLQLLSHPTWN 460


>ref|XP_004300164.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Fragaria vesca subsp. vesca]
          Length = 655

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
 Frame = +1

Query: 25  PSPVGFEIYLQQIFHENVLVKLQDRRPSAGRTQ-RTSGDGFDLLGHFCKILAHRIFSSKV 201
           P+ +  EIYL QIFH++V +K +DR  S G    + + +G  LLGHFC  LAHRIFS+KV
Sbjct: 376 PNQISCEIYLLQIFHQHVFLKAKDRPTSGGGVSGQPAKEGSGLLGHFCMSLAHRIFSNKV 435

Query: 202 LAQLESLV 225
           L +LE++V
Sbjct: 436 LMELENVV 443


>gb|EYU29301.1| hypothetical protein MIMGU_mgv1a002570mg [Mimulus guttatus]
          Length = 657

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 33/69 (47%), Positives = 50/69 (72%), Gaps = 3/69 (4%)
 Frame = +1

Query: 25  PSPVGFEIYLQQIFHENVLVKLQDRRPSAGRTQ---RTSGDGFDLLGHFCKILAHRIFSS 195
           P+ +GFEIYL+Q+FHE   VK +++  ++ R+Q   +   D  ++LGHFC  +AHRIFS+
Sbjct: 382 PNQLGFEIYLRQVFHEYAFVKAKNKAMTSSRSQIPGQPLKDNSNILGHFCMSIAHRIFSN 441

Query: 196 KVLAQLESL 222
           KVL+ LE+L
Sbjct: 442 KVLSLLENL 450


>ref|XP_006400585.1| hypothetical protein EUTSA_v10012923mg [Eutrema salsugineum]
           gi|557101675|gb|ESQ42038.1| hypothetical protein
           EUTSA_v10012923mg [Eutrema salsugineum]
          Length = 650

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
 Frame = +1

Query: 7   LKELPGPSPVGFEIYLQQIFHENVLVKLQDR---RPSAGRTQRTSGDGFDLLGHFCKILA 177
           +K+L  PS   ++IYLQQIFHE+V  K +D+   + S    Q    +   LL HFC  LA
Sbjct: 366 VKKLGFPSRASYDIYLQQIFHEHVFGKAKDQTKSKSSQASNQTAKDNNSGLLDHFCLSLA 425

Query: 178 HRIFSSKVLAQLESLV 225
           HRIFS++V+ QLES+V
Sbjct: 426 HRIFSTRVVVQLESVV 441


>ref|XP_003525658.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like isoform X1 [Glycine max]
           gi|571454302|ref|XP_006579749.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 17-like isoform
           X2 [Glycine max]
          Length = 659

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
 Frame = +1

Query: 40  FEIYLQQIFHENVLVKLQDRRPSAGRTQRTSG----DGFDLLGHFCKILAHRIFSSKVLA 207
           +EIY+QQIFHE +  K  D+  S+G   R SG    DG  LLGHF K LAHRIFS+KVLA
Sbjct: 384 YEIYIQQIFHEYIFGKGGDKPSSSGN--RLSGIQAKDGSSLLGHFFKSLAHRIFSTKVLA 441

Query: 208 QLESLVSF*SLIVHL*NGIW 267
           +LE++V     I  + N  W
Sbjct: 442 ELENVVCKVPYIQLISNPTW 461


>gb|EMT20869.1| hypothetical protein F775_22791 [Aegilops tauschii]
          Length = 549

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
 Frame = +1

Query: 28  SPVGFEIYLQQIFHENVLVKLQD------RRPSAGRTQRTSGDGFDLLGHFCKILAHRIF 189
           SP   EIYL  +FH+N+L K++D      R  S   T   +GD   LLGHFC  +AH+IF
Sbjct: 255 SPKSLEIYLLHMFHDNILKKVRDKYRNIVRYQSPAHTAEPAGDECGLLGHFCMTVAHKIF 314

Query: 190 SSKVLAQLESLVS 228
           S+KV  +LES+VS
Sbjct: 315 SNKVQLELESVVS 327


>ref|XP_003549778.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like isoform X1 [Glycine max]
           gi|571535792|ref|XP_006600757.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 17-like isoform
           X2 [Glycine max]
          Length = 660

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 4/66 (6%)
 Frame = +1

Query: 40  FEIYLQQIFHENVLVKLQDRRPSAGRTQRTSG----DGFDLLGHFCKILAHRIFSSKVLA 207
           +EIY+QQIFHE++  K  ++  S+G   R SG    DG  LLGHF K LAHRIFS+KVLA
Sbjct: 385 YEIYIQQIFHEHIFGKGDEKAISSGN--RLSGVQARDGSSLLGHFFKSLAHRIFSTKVLA 442

Query: 208 QLESLV 225
           +LE++V
Sbjct: 443 ELENVV 448


>ref|XP_006450970.1| hypothetical protein CICLE_v10007689mg [Citrus clementina]
           gi|557554196|gb|ESR64210.1| hypothetical protein
           CICLE_v10007689mg [Citrus clementina]
          Length = 657

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 39/79 (49%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
 Frame = +1

Query: 4   ILKELPG-PSPVGFEIYLQQIFHENVLVKLQDRRPSAGRTQRTSG----DGFDLLGHFCK 168
           IL++  G P+P+ +EIYLQQ+FHE +  + +++  S G   R SG    DG  LLGHFC 
Sbjct: 374 ILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPISTGT--RVSGPPTKDGSGLLGHFCL 431

Query: 169 ILAHRIFSSKVLAQLESLV 225
            LAHRIFS+KV  +LE+ V
Sbjct: 432 SLAHRIFSNKVRVELENAV 450


>ref|XP_006286416.1| hypothetical protein CARUB_v10002972mg [Capsella rubella]
           gi|482555122|gb|EOA19314.1| hypothetical protein
           CARUB_v10002972mg [Capsella rubella]
          Length = 651

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
 Frame = +1

Query: 7   LKELPGPSPVGFEIYLQQIFHENVLVKLQDRRPS-----AGRTQRTSGDGFDLLGHFCKI 171
           LK+L  P+   +EIYLQQIFHE+   K +DR  S     + +T++ S  G  LL HFC  
Sbjct: 369 LKKLGFPNRPSYEIYLQQIFHEHAFGKAKDRPKSKSIRASNQTEKDSNSG--LLDHFCLS 426

Query: 172 LAHRIFSSKVLAQLESLV 225
           L HRIFS++VL  LES+V
Sbjct: 427 LTHRIFSNRVLVHLESVV 444


>ref|XP_006475818.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Citrus sinensis]
          Length = 657

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 39/79 (49%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
 Frame = +1

Query: 4   ILKELPG-PSPVGFEIYLQQIFHENVLVKLQDRRPSAGRTQRTSG----DGFDLLGHFCK 168
           IL++  G P+P+ +EIYLQQ+FHE +  + +++  S G   R SG    DG  LLGHFC 
Sbjct: 374 ILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPISTGT--RVSGPPTKDGSGLLGHFCL 431

Query: 169 ILAHRIFSSKVLAQLESLV 225
            LAHRIFS+KV  +LE+ V
Sbjct: 432 SLAHRIFSNKVHVELENAV 450


>ref|XP_003569428.1| PREDICTED: uncharacterized protein LOC100822959 [Brachypodium
           distachyon]
          Length = 656

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
 Frame = +1

Query: 22  GPSPVGFEIYLQQIFHENVLVKLQDRRPSAGR---TQRTSGDGFDLLGHFCKILAHRIFS 192
           G +P   EIYL  +FHEN+L K++++  +  R     + +GD  +LLGHFC  +AHRIFS
Sbjct: 375 GLNPKSLEIYLLHMFHENILRKVREKYRNIVRYPSPAQAAGDDCNLLGHFCMTVAHRIFS 434

Query: 193 SKVLAQLESLVS 228
           +KV  +LES+VS
Sbjct: 435 NKVHLELESVVS 446


>ref|NP_197517.3| RNA polymerase II transcription mediator [Arabidopsis thaliana]
           gi|395406781|sp|F4K460.1|MED17_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           17 gi|332005425|gb|AED92808.1| RNA polymerase II
           transcription mediator [Arabidopsis thaliana]
          Length = 653

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
 Frame = +1

Query: 7   LKELPGPSPVGFEIYLQQIFHENVLVKLQDRRPS-----AGRTQRTSGDGFDLLGHFCKI 171
           LK+L  P+   +EIYLQQIFHE+   K +D+  S     + +T++ S  G  LL HFC  
Sbjct: 369 LKKLGFPNRTSYEIYLQQIFHEHAFGKAKDQLKSKSIRASNQTEKDSNSG--LLDHFCLS 426

Query: 172 LAHRIFSSKVLAQLESLV 225
           L HRIFS++VL  LES+V
Sbjct: 427 LTHRIFSNRVLVHLESVV 444