BLASTX nr result
ID: Cocculus22_contig00031199
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00031199
(318 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006440653.1| hypothetical protein CICLE_v10023621mg [Citr... 117 2e-24
ref|XP_006494986.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 114 2e-23
emb|CBI28530.3| unnamed protein product [Vitis vinifera] 114 2e-23
ref|XP_002318601.2| hypothetical protein POPTR_0012s07030g, part... 112 4e-23
ref|XP_004508741.1| PREDICTED: pentatricopeptide repeat-containi... 112 5e-23
ref|XP_003622167.1| Pentatricopeptide repeat protein [Medicago t... 112 7e-23
ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containi... 110 2e-22
ref|XP_002514722.1| pentatricopeptide repeat-containing protein,... 109 3e-22
ref|XP_007037432.1| Pentatricopeptide repeat superfamily protein... 108 8e-22
ref|XP_007155289.1| hypothetical protein PHAVU_003G188300g [Phas... 105 8e-21
ref|XP_007210219.1| hypothetical protein PRUPE_ppa015814mg [Prun... 105 8e-21
gb|EXB38552.1| hypothetical protein L484_008580 [Morus notabilis] 101 1e-19
gb|AAM65325.1| unknown [Arabidopsis thaliana] 97 2e-18
ref|NP_200945.1| pentatricopeptide repeat-containing protein [Ar... 97 3e-18
ref|XP_006280363.1| hypothetical protein CARUB_v10026291mg [Caps... 96 4e-18
ref|XP_006394515.1| hypothetical protein EUTSA_v10004085mg [Eutr... 94 3e-17
ref|XP_002866430.1| hypothetical protein ARALYDRAFT_496296 [Arab... 93 4e-17
ref|XP_006849319.1| hypothetical protein AMTR_s00164p00020970 [A... 89 6e-16
gb|ABB47633.1| expressed protein [Oryza sativa Japonica Group] 68 1e-09
>ref|XP_006440653.1| hypothetical protein CICLE_v10023621mg [Citrus clementina]
gi|557542915|gb|ESR53893.1| hypothetical protein
CICLE_v10023621mg [Citrus clementina]
Length = 488
Score = 117 bits (292), Expect = 2e-24
Identities = 60/103 (58%), Positives = 71/103 (68%)
Frame = +3
Query: 9 WSRKTLNDDRGDDVFNQAIRVFAERKXXXXXXXXXXXXQKEHGKMEVETFGVVAEAFVKL 188
WS K L+ D +N AIRVFAE+K +KE ME ++FGV+ E VKL
Sbjct: 97 WSCKNLSASLEDKDYNHAIRVFAEKKDHMAMNILVSDLRKEGRVMETQSFGVLVETLVKL 156
Query: 189 GREDKALGLFKNLEKFKCARDGASVYAIVSALCAKGHARRAEG 317
GRED+ALG+FKNLEKFKC +D +V AIVSALCAKGHARRAEG
Sbjct: 157 GREDEALGIFKNLEKFKCVQDSVTVSAIVSALCAKGHARRAEG 199
>ref|XP_006494986.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Citrus sinensis]
Length = 495
Score = 114 bits (285), Expect = 1e-23
Identities = 58/103 (56%), Positives = 71/103 (68%)
Frame = +3
Query: 9 WSRKTLNDDRGDDVFNQAIRVFAERKXXXXXXXXXXXXQKEHGKMEVETFGVVAEAFVKL 188
WS K ++ D +N AIRVFAE++ +KE ME ++FGV+ E VKL
Sbjct: 102 WSCKNMSASLEDKDYNHAIRVFAEKRDHTAMNILVSDLRKEGRVMESQSFGVLVETLVKL 161
Query: 189 GREDKALGLFKNLEKFKCARDGASVYAIVSALCAKGHARRAEG 317
GRED+ALG+FKNLEKFKC +D +V AIVSALCAKGHARRAEG
Sbjct: 162 GREDEALGIFKNLEKFKCVQDSVTVSAIVSALCAKGHARRAEG 204
>ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61370, mitochondrial-like [Vitis vinifera]
Length = 505
Score = 114 bits (284), Expect = 2e-23
Identities = 58/103 (56%), Positives = 69/103 (66%)
Frame = +3
Query: 9 WSRKTLNDDRGDDVFNQAIRVFAERKXXXXXXXXXXXXQKEHGKMEVETFGVVAEAFVKL 188
WS K N DD FN AI+VFAE+K E +M+ +TFG+VAE V L
Sbjct: 95 WSSKKFNCKLEDDDFNYAIQVFAEKKDLKAIDILVSDLSNEGREMKAQTFGIVAETLVSL 154
Query: 189 GREDKALGLFKNLEKFKCARDGASVYAIVSALCAKGHARRAEG 317
GRED ALGLFKNL+KFKC+ D +V AIV+ALC+KGHARRAEG
Sbjct: 155 GREDDALGLFKNLDKFKCSYDSVTVTAIVNALCSKGHARRAEG 197
>emb|CBI28530.3| unnamed protein product [Vitis vinifera]
Length = 452
Score = 114 bits (284), Expect = 2e-23
Identities = 58/103 (56%), Positives = 69/103 (66%)
Frame = +3
Query: 9 WSRKTLNDDRGDDVFNQAIRVFAERKXXXXXXXXXXXXQKEHGKMEVETFGVVAEAFVKL 188
WS K N DD FN AI+VFAE+K E +M+ +TFG+VAE V L
Sbjct: 64 WSSKKFNCKLEDDDFNYAIQVFAEKKDLKAIDILVSDLSNEGREMKAQTFGIVAETLVSL 123
Query: 189 GREDKALGLFKNLEKFKCARDGASVYAIVSALCAKGHARRAEG 317
GRED ALGLFKNL+KFKC+ D +V AIV+ALC+KGHARRAEG
Sbjct: 124 GREDDALGLFKNLDKFKCSYDSVTVTAIVNALCSKGHARRAEG 166
>ref|XP_002318601.2| hypothetical protein POPTR_0012s07030g, partial [Populus
trichocarpa] gi|550326549|gb|EEE96821.2| hypothetical
protein POPTR_0012s07030g, partial [Populus trichocarpa]
Length = 410
Score = 112 bits (281), Expect = 4e-23
Identities = 57/104 (54%), Positives = 73/104 (70%), Gaps = 1/104 (0%)
Frame = +3
Query: 9 WSRKTLNDDR-GDDVFNQAIRVFAERKXXXXXXXXXXXXQKEHGKMEVETFGVVAEAFVK 185
WS K L+ ++ DD FN IRV AE+K +KE M+ +TF +VAE VK
Sbjct: 53 WSNKVLDSEKLKDDDFNHVIRVLAEKKDHTGMRILISDLRKEGRVMDPQTFALVAETLVK 112
Query: 186 LGREDKALGLFKNLEKFKCARDGASVYAIVSALCAKGHARRAEG 317
LGRED+ALG+FKNLEKFKC +DG +V AI+SALCAKGHA++A+G
Sbjct: 113 LGREDEALGIFKNLEKFKCPQDGFAVTAIISALCAKGHAKKAQG 156
>ref|XP_004508741.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690-like
[Cicer arietinum]
Length = 1253
Score = 112 bits (280), Expect = 5e-23
Identities = 55/103 (53%), Positives = 74/103 (71%)
Frame = +3
Query: 9 WSRKTLNDDRGDDVFNQAIRVFAERKXXXXXXXXXXXXQKEHGKMEVETFGVVAEAFVKL 188
WS K L+ D D+ +N A+RVFAE+K +KE M+ +TFG+VAE FVKL
Sbjct: 858 WSNKHLSRDLEDNDYNYALRVFAEKKDYTAMDILLGDLKKEGRVMDAQTFGLVAETFVKL 917
Query: 189 GREDKALGLFKNLEKFKCARDGASVYAIVSALCAKGHARRAEG 317
G+ED+ALG+FKNL+K+KC D +V AI++ALC+KGHA+RAEG
Sbjct: 918 GKEDEALGIFKNLDKYKCFIDEFTVTAIINALCSKGHAKRAEG 960
>ref|XP_003622167.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497182|gb|AES78385.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 563
Score = 112 bits (279), Expect = 7e-23
Identities = 54/103 (52%), Positives = 73/103 (70%)
Frame = +3
Query: 9 WSRKTLNDDRGDDVFNQAIRVFAERKXXXXXXXXXXXXQKEHGKMEVETFGVVAEAFVKL 188
WS K L++D D +N A+RVF E+K +K+ ME +TFGVVAE +VKL
Sbjct: 169 WSNKNLSNDLEDKDYNYALRVFIEKKDYTAMDILLGDFKKQGRVMEAQTFGVVAETYVKL 228
Query: 189 GREDKALGLFKNLEKFKCARDGASVYAIVSALCAKGHARRAEG 317
G+ED+ALG+FKNL+K+KC D +V AI++ALC+KGHA+RAEG
Sbjct: 229 GKEDEALGIFKNLDKYKCLIDEFTVTAIINALCSKGHAKRAEG 271
>ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Cucumis sativus]
gi|449477571|ref|XP_004155060.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Cucumis sativus]
Length = 487
Score = 110 bits (276), Expect = 2e-22
Identities = 56/103 (54%), Positives = 70/103 (67%)
Frame = +3
Query: 9 WSRKTLNDDRGDDVFNQAIRVFAERKXXXXXXXXXXXXQKEHGKMEVETFGVVAEAFVKL 188
WS K LN D+ FN AIR FA++K +K M+ +TFG VAEAFVK+
Sbjct: 105 WSLKKLNHTLEDEDFNNAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKM 164
Query: 189 GREDKALGLFKNLEKFKCARDGASVYAIVSALCAKGHARRAEG 317
RED+ALGLFKNLEK+KC D +V AI++ALC+KGHA+RAEG
Sbjct: 165 DREDEALGLFKNLEKYKCPHDQFTVVAIITALCSKGHAKRAEG 207
>ref|XP_002514722.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546326|gb|EEF47828.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 479
Score = 109 bits (273), Expect = 3e-22
Identities = 56/103 (54%), Positives = 72/103 (69%)
Frame = +3
Query: 9 WSRKTLNDDRGDDVFNQAIRVFAERKXXXXXXXXXXXXQKEHGKMEVETFGVVAEAFVKL 188
WS K L+ D+ FN AIRV AE+K +KE ME +TFG+VAEA VKL
Sbjct: 80 WSYKRLDFSMKDEDFNHAIRVLAEKKDHTAMQILISDLRKEGRVMEPQTFGLVAEALVKL 139
Query: 189 GREDKALGLFKNLEKFKCARDGASVYAIVSALCAKGHARRAEG 317
GRED+ALG+FKNL+KFKC +D +V AI++ALCA+GHA++A G
Sbjct: 140 GREDEALGIFKNLDKFKCPQDCETVTAIITALCAEGHAKKAYG 182
>ref|XP_007037432.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508774677|gb|EOY21933.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 487
Score = 108 bits (270), Expect = 8e-22
Identities = 56/103 (54%), Positives = 67/103 (65%)
Frame = +3
Query: 9 WSRKTLNDDRGDDVFNQAIRVFAERKXXXXXXXXXXXXQKEHGKMEVETFGVVAEAFVKL 188
WS K L+ D N +RVFA++K + ME +TF VVAE VKL
Sbjct: 95 WSVKNLSSSLEDKDLNNVVRVFAKKKDHTAMGILVSDIRNRGRTMESQTFSVVAEMLVKL 154
Query: 189 GREDKALGLFKNLEKFKCARDGASVYAIVSALCAKGHARRAEG 317
GRED+ALG+FKNLEKFKC RD S+ AIV+ALCAKGHAR+AEG
Sbjct: 155 GREDEALGIFKNLEKFKCPRDSFSLTAIVNALCAKGHARKAEG 197
>ref|XP_007155289.1| hypothetical protein PHAVU_003G188300g [Phaseolus vulgaris]
gi|561028643|gb|ESW27283.1| hypothetical protein
PHAVU_003G188300g [Phaseolus vulgaris]
Length = 494
Score = 105 bits (261), Expect = 8e-21
Identities = 51/103 (49%), Positives = 71/103 (68%)
Frame = +3
Query: 9 WSRKTLNDDRGDDVFNQAIRVFAERKXXXXXXXXXXXXQKEHGKMEVETFGVVAEAFVKL 188
WS K L+ + +N A+RVFAE+ +KE M+ ETFG+VA+ VKL
Sbjct: 101 WSSKNLSHSLENKDYNHALRVFAEKNDYTAMDILMEDLKKEGRVMDAETFGLVADTLVKL 160
Query: 189 GREDKALGLFKNLEKFKCARDGASVYAIVSALCAKGHARRAEG 317
G+ED+ALG+FKNL+K+KC+ D +V AI++ALC+KGHA+RAEG
Sbjct: 161 GKEDQALGVFKNLDKYKCSIDEFTVTAIINALCSKGHAKRAEG 203
>ref|XP_007210219.1| hypothetical protein PRUPE_ppa015814mg [Prunus persica]
gi|462405954|gb|EMJ11418.1| hypothetical protein
PRUPE_ppa015814mg [Prunus persica]
Length = 524
Score = 105 bits (261), Expect = 8e-21
Identities = 53/104 (50%), Positives = 69/104 (66%)
Frame = +3
Query: 6 TWSRKTLNDDRGDDVFNQAIRVFAERKXXXXXXXXXXXXQKEHGKMEVETFGVVAEAFVK 185
+W K L+ D +N IRVFAE+K K ME +TFG+VA+A VK
Sbjct: 62 SWCHKNLDYGLKDKDYNYGIRVFAEKKDHTAMHILLSDLVKTGRAMEAQTFGLVAQALVK 121
Query: 186 LGREDKALGLFKNLEKFKCARDGASVYAIVSALCAKGHARRAEG 317
LGRED+ALGLFKNL +KC +DG +V +IV+ALC++GHA+RAEG
Sbjct: 122 LGREDEALGLFKNLSTYKCPQDGHTVTSIVNALCSRGHAKRAEG 165
>gb|EXB38552.1| hypothetical protein L484_008580 [Morus notabilis]
Length = 518
Score = 101 bits (251), Expect = 1e-19
Identities = 50/103 (48%), Positives = 68/103 (66%)
Frame = +3
Query: 9 WSRKTLNDDRGDDVFNQAIRVFAERKXXXXXXXXXXXXQKEHGKMEVETFGVVAEAFVKL 188
WS K L D D +N AIRVFA +K +K +E +T+ +VAE VKL
Sbjct: 94 WSHKNLKCDLEDKDYNHAIRVFAGKKDHTALEILVSDLKKGGRALESQTYAIVAETLVKL 153
Query: 189 GREDKALGLFKNLEKFKCARDGASVYAIVSALCAKGHARRAEG 317
GRED+ALG+FKN +K+KC ++ +V A+V+ALCA+GHA+RAEG
Sbjct: 154 GREDEALGIFKNSDKYKCPQNSFTVTAVVNALCAQGHAKRAEG 196
>gb|AAM65325.1| unknown [Arabidopsis thaliana]
Length = 487
Score = 97.1 bits (240), Expect = 2e-18
Identities = 46/104 (44%), Positives = 67/104 (64%)
Frame = +3
Query: 6 TWSRKTLNDDRGDDVFNQAIRVFAERKXXXXXXXXXXXXQKEHGKMEVETFGVVAEAFVK 185
+WS K+L D FN +RV AE+K +KE+ M+ +TF +VAE VK
Sbjct: 91 SWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVK 150
Query: 186 LGREDKALGLFKNLEKFKCARDGASVYAIVSALCAKGHARRAEG 317
+G+E+ A+G+FK L+KF C +DG +V AI+SALC++GH +RA G
Sbjct: 151 IGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALG 194
>ref|NP_200945.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171474|sp|Q9FLJ6.1|PP439_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g61370, mitochondrial; Flags: Precursor
gi|9757858|dbj|BAB08492.1| unnamed protein product
[Arabidopsis thaliana] gi|17529064|gb|AAL38742.1|
unknown protein [Arabidopsis thaliana]
gi|23296891|gb|AAN13197.1| unknown protein [Arabidopsis
thaliana] gi|332010076|gb|AED97459.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 487
Score = 96.7 bits (239), Expect = 3e-18
Identities = 46/104 (44%), Positives = 67/104 (64%)
Frame = +3
Query: 6 TWSRKTLNDDRGDDVFNQAIRVFAERKXXXXXXXXXXXXQKEHGKMEVETFGVVAEAFVK 185
+WS K+L D FN +RV AE+K +KE+ M+ +TF +VAE VK
Sbjct: 91 SWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVK 150
Query: 186 LGREDKALGLFKNLEKFKCARDGASVYAIVSALCAKGHARRAEG 317
+G+E+ A+G+FK L+KF C +DG +V AI+SALC++GH +RA G
Sbjct: 151 VGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALG 194
>ref|XP_006280363.1| hypothetical protein CARUB_v10026291mg [Capsella rubella]
gi|482549067|gb|EOA13261.1| hypothetical protein
CARUB_v10026291mg [Capsella rubella]
Length = 490
Score = 96.3 bits (238), Expect = 4e-18
Identities = 46/104 (44%), Positives = 65/104 (62%)
Frame = +3
Query: 6 TWSRKTLNDDRGDDVFNQAIRVFAERKXXXXXXXXXXXXQKEHGKMEVETFGVVAEAFVK 185
+WS K L D FN +RV AE+K +KE+ M+ +TF +VAE VK
Sbjct: 94 SWSCKNLGSSLHDKEFNHVLRVLAEKKDNTAIQILLSDLRKENRAMDKQTFSIVAETLVK 153
Query: 186 LGREDKALGLFKNLEKFKCARDGASVYAIVSALCAKGHARRAEG 317
+G+ED A+G+FK L+KF C +D +V AI+SALC++GH +RA G
Sbjct: 154 IGKEDDAIGIFKILDKFSCPQDSFTVTAIISALCSRGHVKRALG 197
>ref|XP_006394515.1| hypothetical protein EUTSA_v10004085mg [Eutrema salsugineum]
gi|557091154|gb|ESQ31801.1| hypothetical protein
EUTSA_v10004085mg [Eutrema salsugineum]
Length = 489
Score = 93.6 bits (231), Expect = 3e-17
Identities = 45/104 (43%), Positives = 65/104 (62%)
Frame = +3
Query: 6 TWSRKTLNDDRGDDVFNQAIRVFAERKXXXXXXXXXXXXQKEHGKMEVETFGVVAEAFVK 185
+WS K L D FN +RV AE+K +K++ M+ +TF +VAE VK
Sbjct: 93 SWSCKNLGSCLEDKTFNHVLRVLAEKKDHTAIQILLSDLRKQNRAMDKQTFSLVAETLVK 152
Query: 186 LGREDKALGLFKNLEKFKCARDGASVYAIVSALCAKGHARRAEG 317
+GRE+ A+G+FK L+KF C +D +V AI+SALC++GH +RA G
Sbjct: 153 IGREEDAIGIFKILDKFSCQQDSFTVTAIISALCSRGHVKRALG 196
>ref|XP_002866430.1| hypothetical protein ARALYDRAFT_496296 [Arabidopsis lyrata subsp.
lyrata] gi|297312265|gb|EFH42689.1| hypothetical protein
ARALYDRAFT_496296 [Arabidopsis lyrata subsp. lyrata]
Length = 489
Score = 92.8 bits (229), Expect = 4e-17
Identities = 44/104 (42%), Positives = 67/104 (64%)
Frame = +3
Query: 6 TWSRKTLNDDRGDDVFNQAIRVFAERKXXXXXXXXXXXXQKEHGKMEVETFGVVAEAFVK 185
+WS K+L + D FN +RV AE+K ++E+ M+ +TF +VAE VK
Sbjct: 93 SWSCKSLGSNVHDKEFNHVLRVLAEKKDHTAIQILLSDLRQENRAMDKQTFSIVAETLVK 152
Query: 186 LGREDKALGLFKNLEKFKCARDGASVYAIVSALCAKGHARRAEG 317
+G+E+ A+G+FK L+KF C +D +V AI+SALC++GH +RA G
Sbjct: 153 IGKEEDAIGIFKILDKFLCPQDSFTVTAIISALCSRGHVKRALG 196
>ref|XP_006849319.1| hypothetical protein AMTR_s00164p00020970 [Amborella trichopoda]
gi|548852840|gb|ERN10900.1| hypothetical protein
AMTR_s00164p00020970 [Amborella trichopoda]
Length = 459
Score = 89.0 bits (219), Expect = 6e-16
Identities = 43/104 (41%), Positives = 63/104 (60%)
Frame = +3
Query: 6 TWSRKTLNDDRGDDVFNQAIRVFAERKXXXXXXXXXXXXQKEHGKMEVETFGVVAEAFVK 185
TWS K D +FN AI++FA K ++E M ++T+ +A V
Sbjct: 78 TWSAKQPTCKLPDTLFNHAIKLFASLKDLRAMELLVTELKRESRGMGIDTWAAIATTMVD 137
Query: 186 LGREDKALGLFKNLEKFKCARDGASVYAIVSALCAKGHARRAEG 317
G+ED+A+G+FKN+EK++C RD S+ +V ALCA+GHAR+AEG
Sbjct: 138 HGKEDQAIGIFKNIEKYRCPRDEKSLNLLVHALCARGHARKAEG 181
>gb|ABB47633.1| expressed protein [Oryza sativa Japonica Group]
Length = 658
Score = 67.8 bits (164), Expect = 1e-09
Identities = 43/115 (37%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Frame = +3
Query: 3 ITWSRKTLNDDRGDDVFNQAIRVFAERKXXXXXXXXXXXXQKEHGKMEVETFGVVAEAFV 182
++W R GD+ + AI A +K+ +M ETF VV EA V
Sbjct: 78 LSWCRSKDAGGIGDEALDSAIAALARMGDLTAMRIAVADAEKDGRRMSPETFTVVVEALV 137
Query: 183 KLGREDKALGLFKNLEKFKC-----ARDG-----ASVYAIVSALCAKGHARRAEG 317
KLG+ED+A+ LF+ LE+ + A DG +S A+V ALC KGHAR A+G
Sbjct: 138 KLGKEDEAVRLFRGLERQRLLPRRDAGDGGEGVWSSSLAMVQALCMKGHAREAQG 192