BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00031116
         (313 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308534.1| hypothetical protein POPTR_0006s23980g [Popu...   116   3e-24
ref|XP_002279628.2| PREDICTED: pentatricopeptide repeat-containi...   116   4e-24
ref|XP_007224434.1| hypothetical protein PRUPE_ppa021491mg [Prun...   115   6e-24
emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]   115   6e-24
gb|EXB48288.1| hypothetical protein L484_003771 [Morus notabilis]     113   2e-23
ref|XP_007012378.1| Pentatricopeptide repeat superfamily protein...   111   1e-22
ref|XP_006578089.1| PREDICTED: pentatricopeptide repeat-containi...   102   4e-20
ref|XP_007136868.1| hypothetical protein PHAVU_009G080600g [Phas...   102   4e-20
ref|XP_006849607.1| hypothetical protein AMTR_s00024p00204830 [A...    99   5e-19
ref|XP_006453029.1| hypothetical protein CICLE_v10007870mg [Citr...    98   1e-18
ref|XP_006474468.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
ref|XP_002516112.1| pentatricopeptide repeat-containing protein,...    97   2e-18

>ref|XP_002308534.1| hypothetical protein POPTR_0006s23980g [Populus trichocarpa]
           gi|222854510|gb|EEE92057.1| hypothetical protein
           POPTR_0006s23980g [Populus trichocarpa]
          Length = 567

 Score =  116 bits (291), Expect = 3e-24
 Identities = 59/96 (61%), Positives = 67/96 (69%)
 Frame = -3

Query: 290 LNQFSPILTPNLVIEVIKSNPNNPHQVLFFFNWASXXXXXXXNYSHTHRCYSAMIDLLIS 111
           LNQFSP L  NLVIEVIK    NP+Q LFFFNWAS       NYSH HRCY A+IDLL+S
Sbjct: 51  LNQFSPHLDSNLVIEVIKEQQPNPYQALFFFNWASNLNPNPNNYSHNHRCYVAIIDLLLS 110

Query: 110 HSLFSTAVNLLEKTQNLTDFMMGKLIKAYGDRGDIR 3
           HSLF  A NLLEK    +D ++ KLI+AYG  GD +
Sbjct: 111 HSLFPIAKNLLEKHGTFSDLLVSKLIRAYGYSGDTK 146


>ref|XP_002279628.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like [Vitis vinifera]
          Length = 563

 Score =  116 bits (290), Expect = 4e-24
 Identities = 58/96 (60%), Positives = 69/96 (71%)
 Frame = -3

Query: 290 LNQFSPILTPNLVIEVIKSNPNNPHQVLFFFNWASXXXXXXXNYSHTHRCYSAMIDLLIS 111
           L+QF+P L P+LVI+VIKS   NP+  LFFFNWAS       NYSH+H CY A+ DLLIS
Sbjct: 105 LSQFAPFLNPSLVIQVIKSQ-KNPYHALFFFNWASNPNPNPNNYSHSHLCYVAITDLLIS 163

Query: 110 HSLFSTAVNLLEKTQNLTDFMMGKLIKAYGDRGDIR 3
           H LFSTA +LL+    L+DF   K +KAYGDRGDIR
Sbjct: 164 HGLFSTASSLLQSHHRLSDFAAAKFVKAYGDRGDIR 199


>ref|XP_007224434.1| hypothetical protein PRUPE_ppa021491mg [Prunus persica]
           gi|462421370|gb|EMJ25633.1| hypothetical protein
           PRUPE_ppa021491mg [Prunus persica]
          Length = 557

 Score =  115 bits (288), Expect = 6e-24
 Identities = 57/96 (59%), Positives = 71/96 (73%)
 Frame = -3

Query: 290 LNQFSPILTPNLVIEVIKSNPNNPHQVLFFFNWASXXXXXXXNYSHTHRCYSAMIDLLIS 111
           LNQFSP L P+LVI+VIKS PN P+  LFFF W+S       NYSHTH CY A+ +LL+S
Sbjct: 46  LNQFSPHLNPSLVIQVIKSQPN-PYHALFFFKWSSNPDPNPNNYSHTHNCYLAITELLLS 104

Query: 110 HSLFSTAVNLLEKTQNLTDFMMGKLIKAYGDRGDIR 3
           HSLFSTA +LL+++  L DFM+G+ I  +G RGDIR
Sbjct: 105 HSLFSTASSLLQESNRLYDFMLGRFITTHGRRGDIR 140


>emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
          Length = 912

 Score =  115 bits (288), Expect = 6e-24
 Identities = 58/96 (60%), Positives = 68/96 (70%)
 Frame = -3

Query: 290 LNQFSPILTPNLVIEVIKSNPNNPHQVLFFFNWASXXXXXXXNYSHTHRCYSAMIDLLIS 111
           L+QF+P L P LVI+VIKS   NP+  LFFFNWAS       NYSH+H CY A+ DLLIS
Sbjct: 105 LSQFAPFLNPXLVIQVIKSQ-KNPYHALFFFNWASNPNPNPNNYSHSHLCYVAITDLLIS 163

Query: 110 HSLFSTAVNLLEKTQNLTDFMMGKLIKAYGDRGDIR 3
           H LFSTA +LL+    L+DF   K +KAYGDRGDIR
Sbjct: 164 HGLFSTASSLLQSHHRLSDFAAAKFVKAYGDRGDIR 199


>gb|EXB48288.1| hypothetical protein L484_003771 [Morus notabilis]
          Length = 563

 Score =  113 bits (283), Expect = 2e-23
 Identities = 58/96 (60%), Positives = 73/96 (76%)
 Frame = -3

Query: 290 LNQFSPILTPNLVIEVIKSNPNNPHQVLFFFNWASXXXXXXXNYSHTHRCYSAMIDLLIS 111
           LNQFSP L PNLVI VIK N +NP+  LFFFNWAS       NYSHT +C++A+ DLL+S
Sbjct: 42  LNQFSPDLNPNLVIRVIK-NQSNPYHGLFFFNWASNPSPNPCNYSHTFQCFAAITDLLLS 100

Query: 110 HSLFSTAVNLLEKTQNLTDFMMGKLIKAYGDRGDIR 3
           H LFSTA +LL ++  L+D M+G+ IKA+G+RGDIR
Sbjct: 101 HFLFSTASSLLLQSDKLSDSMIGRFIKAHGNRGDIR 136


>ref|XP_007012378.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508782741|gb|EOY29997.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 722

 Score =  111 bits (277), Expect = 1e-22
 Identities = 53/96 (55%), Positives = 72/96 (75%)
 Frame = -3

Query: 290 LNQFSPILTPNLVIEVIKSNPNNPHQVLFFFNWASXXXXXXXNYSHTHRCYSAMIDLLIS 111
           LN+FSP L PNLVI+VI     NP++ LFFFNWA+       NY+H ++CY A+ +LL+S
Sbjct: 47  LNRFSPYLEPNLVIQVINKQ-TNPYRALFFFNWAANPNPNPKNYTHDNKCYEAITNLLLS 105

Query: 110 HSLFSTAVNLLEKTQNLTDFMMGKLIKAYGDRGDIR 3
           HSLFS A+ LLEK+Q L+DF + K+IKA GD+G+I+
Sbjct: 106 HSLFSPAIQLLEKSQKLSDFFVSKIIKANGDKGNIK 141


>ref|XP_006578089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 551

 Score =  102 bits (255), Expect = 4e-20
 Identities = 55/96 (57%), Positives = 65/96 (67%)
 Frame = -3

Query: 290 LNQFSPILTPNLVIEVIKSNPNNPHQVLFFFNWASXXXXXXXNYSHTHRCYSAMIDLLIS 111
           L +FS  LTPNLVI VIK N NNP   L FFNWAS       NYSHT  CY+A+ DLL+S
Sbjct: 48  LREFSSHLTPNLVIHVIK-NQNNPQHALHFFNWASNPNPNPNNYSHTPLCYTAITDLLLS 106

Query: 110 HSLFSTAVNLLEKTQNLTDFMMGKLIKAYGDRGDIR 3
           HSLFSTA +LL  +  L+D ++ + I A G RGDIR
Sbjct: 107 HSLFSTAFSLLRHSNRLSDNLVCRFINALGHRGDIR 142


>ref|XP_007136868.1| hypothetical protein PHAVU_009G080600g [Phaseolus vulgaris]
           gi|561009955|gb|ESW08862.1| hypothetical protein
           PHAVU_009G080600g [Phaseolus vulgaris]
          Length = 550

 Score =  102 bits (255), Expect = 4e-20
 Identities = 52/96 (54%), Positives = 67/96 (69%)
 Frame = -3

Query: 290 LNQFSPILTPNLVIEVIKSNPNNPHQVLFFFNWASXXXXXXXNYSHTHRCYSAMIDLLIS 111
           L +FSP LTP++V++VI+ N  NPH  L FFNWAS       NYSHT  CY+A+ DLL+S
Sbjct: 51  LTKFSPHLTPDIVVQVIR-NQKNPHHALHFFNWASNPIPNPKNYSHTPFCYAAITDLLLS 109

Query: 110 HSLFSTAVNLLEKTQNLTDFMMGKLIKAYGDRGDIR 3
           HSLFSTA +LL  +  L+DF++ + I A G  GDIR
Sbjct: 110 HSLFSTAYSLLRHSNKLSDFLICRFINALGHCGDIR 145


>ref|XP_006849607.1| hypothetical protein AMTR_s00024p00204830 [Amborella trichopoda]
           gi|548853182|gb|ERN11188.1| hypothetical protein
           AMTR_s00024p00204830 [Amborella trichopoda]
          Length = 550

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 53/96 (55%), Positives = 63/96 (65%)
 Frame = -3

Query: 290 LNQFSPILTPNLVIEVIKSNPNNPHQVLFFFNWASXXXXXXXNYSHTHRCYSAMIDLLIS 111
           L QF P L P +VI+VIKS   +P   LFFFNWAS        Y HT  CY+A+ D LIS
Sbjct: 44  LKQFIPSLNPQIVIQVIKSQ-TDPQSSLFFFNWASSLSPH---YRHTPPCYNAITDTLIS 99

Query: 110 HSLFSTAVNLLEKTQNLTDFMMGKLIKAYGDRGDIR 3
           H +FSTA  LL  ++ L+DF + K IKAYGDRGDIR
Sbjct: 100 HGMFSTAEELLLNSKGLSDFNVAKFIKAYGDRGDIR 135


>ref|XP_006453029.1| hypothetical protein CICLE_v10007870mg [Citrus clementina]
           gi|557556255|gb|ESR66269.1| hypothetical protein
           CICLE_v10007870mg [Citrus clementina]
          Length = 567

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 49/96 (51%), Positives = 64/96 (66%)
 Frame = -3

Query: 290 LNQFSPILTPNLVIEVIKSNPNNPHQVLFFFNWASXXXXXXXNYSHTHRCYSAMIDLLIS 111
           L+QFS  L  NLV +VI     NP+  LFFFNWAS        Y HT  CY+A+ D+L+S
Sbjct: 46  LDQFSLCLGSNLVTKVIYEQ-TNPYHALFFFNWASNPNPNPNKYHHTTPCYAAITDVLLS 104

Query: 110 HSLFSTAVNLLEKTQNLTDFMMGKLIKAYGDRGDIR 3
           HSL S A +LL+ +  L+DF + KLIKAYGDRG+++
Sbjct: 105 HSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVK 140


>ref|XP_006474468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Citrus sinensis]
           gi|343887304|dbj|BAK61850.1| PPR containing protein
           [Citrus unshiu]
          Length = 567

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 48/96 (50%), Positives = 64/96 (66%)
 Frame = -3

Query: 290 LNQFSPILTPNLVIEVIKSNPNNPHQVLFFFNWASXXXXXXXNYSHTHRCYSAMIDLLIS 111
           L+QFS  L  N+V +VI     NP+  LFFFNWAS        Y HT  CY+A+ D+L+S
Sbjct: 46  LDQFSLCLGSNIVTKVIYEQ-TNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLS 104

Query: 110 HSLFSTAVNLLEKTQNLTDFMMGKLIKAYGDRGDIR 3
           HSL S A +LL+ +  L+DF + KLIKAYGDRG+++
Sbjct: 105 HSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVK 140


>ref|XP_002516112.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544598|gb|EEF46114.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 461

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 48/96 (50%), Positives = 63/96 (65%)
 Frame = -3

Query: 290 LNQFSPILTPNLVIEVIKSNPNNPHQVLFFFNWASXXXXXXXNYSHTHRCYSAMIDLLIS 111
           LNQFSP L   LVIEVI+   +NP+  LFFFNWAS       NY H H CY A+ DLL+S
Sbjct: 46  LNQFSPYLNSQLVIEVIRKQ-SNPYHALFFFNWASNLCPNPNNYFHNHHCYVAITDLLLS 104

Query: 110 HSLFSTAVNLLEKTQNLTDFMMGKLIKAYGDRGDIR 3
           HSLF+ A +LL+    ++D M+ K I AYG+  +++
Sbjct: 105 HSLFALASSLLQNANKMSDLMVSKFIIAYGNLKEVK 140