BLASTX nr result
ID: Cocculus22_contig00031088
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00031088
(310 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo] 139 4e-31
ref|XP_007208373.1| hypothetical protein PRUPE_ppa000881mg [Prun... 137 1e-30
gb|EXB39214.1| 5'-3' exoribonuclease 4 [Morus notabilis] 135 4e-30
ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, par... 134 1e-29
ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cuc... 134 1e-29
ref|XP_006826276.1| hypothetical protein AMTR_s00004p00046450 [A... 134 2e-29
ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus co... 131 8e-29
ref|XP_004302012.1| PREDICTED: 5'-3' exoribonuclease 4-like [Fra... 130 1e-28
ref|XP_006382752.1| 5'-3' exoribonuclease family protein [Populu... 130 2e-28
ref|XP_006606481.1| PREDICTED: 5'-3' exoribonuclease 4-like isof... 129 3e-28
ref|XP_006606479.1| PREDICTED: 5'-3' exoribonuclease 4-like isof... 129 3e-28
gb|EPS72691.1| hypothetical protein M569_02065, partial [Genlise... 129 3e-28
ref|XP_006301240.1| hypothetical protein CARUB_v10021640mg [Caps... 129 3e-28
ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana] ... 129 3e-28
ref|XP_006606480.1| PREDICTED: 5'-3' exoribonuclease 4-like isof... 129 3e-28
gb|AAD25627.1|AC005287_29 Dhm1- and Dhm2-like protein [Arabidops... 129 3e-28
ref|XP_006389319.1| 5'-3' exoribonuclease family protein [Populu... 129 5e-28
gb|EYU37061.1| hypothetical protein MIMGU_mgv1a002926mg [Mimulus... 128 9e-28
ref|XP_007144805.1| hypothetical protein PHAVU_007G185300g [Phas... 125 5e-27
ref|XP_006433057.1| hypothetical protein CICLE_v10000168mg [Citr... 125 5e-27
>gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo]
Length = 934
Score = 139 bits (350), Expect = 4e-31
Identities = 61/69 (88%), Positives = 66/69 (95%)
Frame = +2
Query: 44 MGVPAFYRWLADRYPLSISDVIEEEPSEGPNGVVLPIDVSGPNPNGVEFDNLYLDMNGII 223
MGVPAFYRWLADRYP SI+DV+EEEP +GPNGV+LPIDVS PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPLDGPNGVLLPIDVSKPNPNGMEFDNLYLDMNGII 60
Query: 224 HPCFHPEGK 250
HPCFHPEGK
Sbjct: 61 HPCFHPEGK 69
>ref|XP_007208373.1| hypothetical protein PRUPE_ppa000881mg [Prunus persica]
gi|462404015|gb|EMJ09572.1| hypothetical protein
PRUPE_ppa000881mg [Prunus persica]
Length = 972
Score = 137 bits (346), Expect = 1e-30
Identities = 61/69 (88%), Positives = 64/69 (92%)
Frame = +2
Query: 44 MGVPAFYRWLADRYPLSISDVIEEEPSEGPNGVVLPIDVSGPNPNGVEFDNLYLDMNGII 223
MGVPAFYRWLADRYPLSI DV+EE+P EGPNGV LPIDVS PNPNG EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVVEEQPREGPNGVPLPIDVSRPNPNGYEFDNLYLDMNGII 60
Query: 224 HPCFHPEGK 250
HPCFHP+GK
Sbjct: 61 HPCFHPDGK 69
>gb|EXB39214.1| 5'-3' exoribonuclease 4 [Morus notabilis]
Length = 957
Score = 135 bits (341), Expect = 4e-30
Identities = 59/69 (85%), Positives = 64/69 (92%)
Frame = +2
Query: 44 MGVPAFYRWLADRYPLSISDVIEEEPSEGPNGVVLPIDVSGPNPNGVEFDNLYLDMNGII 223
MGVPAFYRWLADRYPLSISDV+EEEP E NG+ +PIDVS PNPNG+EFDNLYLDMNG+I
Sbjct: 1 MGVPAFYRWLADRYPLSISDVVEEEPKEDSNGIPMPIDVSKPNPNGLEFDNLYLDMNGLI 60
Query: 224 HPCFHPEGK 250
HPCFHPEGK
Sbjct: 61 HPCFHPEGK 69
>ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus]
Length = 254
Score = 134 bits (337), Expect = 1e-29
Identities = 59/69 (85%), Positives = 64/69 (92%)
Frame = +2
Query: 44 MGVPAFYRWLADRYPLSISDVIEEEPSEGPNGVVLPIDVSGPNPNGVEFDNLYLDMNGII 223
MGVPAFYRWLADRYP SI+DV+EEEP GP+GV+ PIDVS PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPVGGPSGVLFPIDVSKPNPNGMEFDNLYLDMNGII 60
Query: 224 HPCFHPEGK 250
HPCFHPEGK
Sbjct: 61 HPCFHPEGK 69
>ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cucumis sativus]
Length = 934
Score = 134 bits (337), Expect = 1e-29
Identities = 59/69 (85%), Positives = 64/69 (92%)
Frame = +2
Query: 44 MGVPAFYRWLADRYPLSISDVIEEEPSEGPNGVVLPIDVSGPNPNGVEFDNLYLDMNGII 223
MGVPAFYRWLADRYP SI+DV+EEEP GP+GV+ PIDVS PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPVGGPSGVLFPIDVSKPNPNGMEFDNLYLDMNGII 60
Query: 224 HPCFHPEGK 250
HPCFHPEGK
Sbjct: 61 HPCFHPEGK 69
>ref|XP_006826276.1| hypothetical protein AMTR_s00004p00046450 [Amborella trichopoda]
gi|548830590|gb|ERM93513.1| hypothetical protein
AMTR_s00004p00046450 [Amborella trichopoda]
Length = 936
Score = 134 bits (336), Expect = 2e-29
Identities = 60/69 (86%), Positives = 62/69 (89%)
Frame = +2
Query: 44 MGVPAFYRWLADRYPLSISDVIEEEPSEGPNGVVLPIDVSGPNPNGVEFDNLYLDMNGII 223
MGVPAFYRWLADRYPL I DVIEEEP EG NGV+LP+DVS PNPN EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLCIVDVIEEEPVEGDNGVLLPVDVSKPNPNNTEFDNLYLDMNGII 60
Query: 224 HPCFHPEGK 250
HPCFHPEGK
Sbjct: 61 HPCFHPEGK 69
>ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease,
putative [Ricinus communis]
Length = 964
Score = 131 bits (330), Expect = 8e-29
Identities = 57/69 (82%), Positives = 63/69 (91%)
Frame = +2
Query: 44 MGVPAFYRWLADRYPLSISDVIEEEPSEGPNGVVLPIDVSGPNPNGVEFDNLYLDMNGII 223
MGVPAFYRWLADRYPL+I DV+EEEP E NGV+ PID+S PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLAIVDVVEEEPKEDSNGVIGPIDISKPNPNGLEFDNLYLDMNGII 60
Query: 224 HPCFHPEGK 250
HPCFHP+GK
Sbjct: 61 HPCFHPDGK 69
>ref|XP_004302012.1| PREDICTED: 5'-3' exoribonuclease 4-like [Fragaria vesca subsp.
vesca]
Length = 971
Score = 130 bits (328), Expect = 1e-28
Identities = 58/69 (84%), Positives = 61/69 (88%)
Frame = +2
Query: 44 MGVPAFYRWLADRYPLSISDVIEEEPSEGPNGVVLPIDVSGPNPNGVEFDNLYLDMNGII 223
MGVPAFYRWLADRYPLSI DV+EE P E PNGV PIDVS PNPNG EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVVEEHPREDPNGVPRPIDVSRPNPNGFEFDNLYLDMNGII 60
Query: 224 HPCFHPEGK 250
HPCFHP+G+
Sbjct: 61 HPCFHPDGR 69
>ref|XP_006382752.1| 5'-3' exoribonuclease family protein [Populus trichocarpa]
gi|550338119|gb|ERP60549.1| 5'-3' exoribonuclease family
protein [Populus trichocarpa]
Length = 948
Score = 130 bits (327), Expect = 2e-28
Identities = 59/69 (85%), Positives = 61/69 (88%)
Frame = +2
Query: 44 MGVPAFYRWLADRYPLSISDVIEEEPSEGPNGVVLPIDVSGPNPNGVEFDNLYLDMNGII 223
MGVPAFYRWLADRYPLSI DVIEEEP E NG PIDVS PNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVIEEEPQEDSNGNSKPIDVSKPNPNGIEYDNLYLDMNGII 60
Query: 224 HPCFHPEGK 250
HPCFHPEGK
Sbjct: 61 HPCFHPEGK 69
>ref|XP_006606481.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X3 [Glycine max]
Length = 907
Score = 129 bits (325), Expect = 3e-28
Identities = 56/69 (81%), Positives = 63/69 (91%)
Frame = +2
Query: 44 MGVPAFYRWLADRYPLSISDVIEEEPSEGPNGVVLPIDVSGPNPNGVEFDNLYLDMNGII 223
MGVPAFYRWLADRYPLSI+DV+EE+P+ G +GV PID S PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIADVVEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMNGII 60
Query: 224 HPCFHPEGK 250
HPCFHP+GK
Sbjct: 61 HPCFHPDGK 69
>ref|XP_006606479.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X1 [Glycine max]
Length = 932
Score = 129 bits (325), Expect = 3e-28
Identities = 56/69 (81%), Positives = 63/69 (91%)
Frame = +2
Query: 44 MGVPAFYRWLADRYPLSISDVIEEEPSEGPNGVVLPIDVSGPNPNGVEFDNLYLDMNGII 223
MGVPAFYRWLADRYPLSI+DV+EE+P+ G +GV PID S PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIADVVEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMNGII 60
Query: 224 HPCFHPEGK 250
HPCFHP+GK
Sbjct: 61 HPCFHPDGK 69
>gb|EPS72691.1| hypothetical protein M569_02065, partial [Genlisea aurea]
Length = 955
Score = 129 bits (325), Expect = 3e-28
Identities = 56/69 (81%), Positives = 61/69 (88%)
Frame = +2
Query: 44 MGVPAFYRWLADRYPLSISDVIEEEPSEGPNGVVLPIDVSGPNPNGVEFDNLYLDMNGII 223
MGVPAFYRWLADRYPL I DV+EEEP G+ +PID+SGPNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLCIVDVVEEEPRRNEFGMEIPIDISGPNPNGIEFDNLYLDMNGII 60
Query: 224 HPCFHPEGK 250
HPCFHPEGK
Sbjct: 61 HPCFHPEGK 69
>ref|XP_006301240.1| hypothetical protein CARUB_v10021640mg [Capsella rubella]
gi|482569950|gb|EOA34138.1| hypothetical protein
CARUB_v10021640mg [Capsella rubella]
Length = 948
Score = 129 bits (325), Expect = 3e-28
Identities = 55/69 (79%), Positives = 63/69 (91%)
Frame = +2
Query: 44 MGVPAFYRWLADRYPLSISDVIEEEPSEGPNGVVLPIDVSGPNPNGVEFDNLYLDMNGII 223
MGVPAFYRWLADRYP SISDV+EEEP++G G ++P+D++ PNPNG EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITKPNPNGFEFDNLYLDMNGII 60
Query: 224 HPCFHPEGK 250
HPCFHPEGK
Sbjct: 61 HPCFHPEGK 69
>ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana]
gi|75262833|sp|Q9FQ04.1|XRN4_ARATH RecName: Full=5'-3'
exoribonuclease 4; AltName: Full=Protein ACC INSENSITIVE
1; AltName: Full=Protein ETHYLENE INSENSITIVE 5;
AltName: Full=Protein EXORIBONUCLEASE 4
gi|11875626|gb|AAG40731.1|AF286718_1 XRN4 [Arabidopsis
thaliana] gi|17381112|gb|AAL36368.1| putative
exonuclease [Arabidopsis thaliana]
gi|20259665|gb|AAM14350.1| putative exonuclease
[Arabidopsis thaliana] gi|109627646|gb|ABG34298.1|
At1g54490 [Arabidopsis thaliana]
gi|332194988|gb|AEE33109.1| 5'-3' exoribonuclease 4
[Arabidopsis thaliana]
Length = 947
Score = 129 bits (325), Expect = 3e-28
Identities = 55/69 (79%), Positives = 63/69 (91%)
Frame = +2
Query: 44 MGVPAFYRWLADRYPLSISDVIEEEPSEGPNGVVLPIDVSGPNPNGVEFDNLYLDMNGII 223
MGVPAFYRWLADRYP SISDV+EEEP++G G ++P+D++ PNPNG EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITRPNPNGFEFDNLYLDMNGII 60
Query: 224 HPCFHPEGK 250
HPCFHPEGK
Sbjct: 61 HPCFHPEGK 69
>ref|XP_006606480.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X2 [Glycine max]
Length = 931
Score = 129 bits (325), Expect = 3e-28
Identities = 56/69 (81%), Positives = 63/69 (91%)
Frame = +2
Query: 44 MGVPAFYRWLADRYPLSISDVIEEEPSEGPNGVVLPIDVSGPNPNGVEFDNLYLDMNGII 223
MGVPAFYRWLADRYPLSI+DV+EE+P+ G +GV PID S PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIADVVEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMNGII 60
Query: 224 HPCFHPEGK 250
HPCFHP+GK
Sbjct: 61 HPCFHPDGK 69
>gb|AAD25627.1|AC005287_29 Dhm1- and Dhm2-like protein [Arabidopsis thaliana]
Length = 965
Score = 129 bits (325), Expect = 3e-28
Identities = 55/69 (79%), Positives = 63/69 (91%)
Frame = +2
Query: 44 MGVPAFYRWLADRYPLSISDVIEEEPSEGPNGVVLPIDVSGPNPNGVEFDNLYLDMNGII 223
MGVPAFYRWLADRYP SISDV+EEEP++G G ++P+D++ PNPNG EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITRPNPNGFEFDNLYLDMNGII 60
Query: 224 HPCFHPEGK 250
HPCFHPEGK
Sbjct: 61 HPCFHPEGK 69
>ref|XP_006389319.1| 5'-3' exoribonuclease family protein [Populus trichocarpa]
gi|550312079|gb|ERP48233.1| 5'-3' exoribonuclease family
protein [Populus trichocarpa]
Length = 965
Score = 129 bits (323), Expect = 5e-28
Identities = 60/69 (86%), Positives = 61/69 (88%)
Frame = +2
Query: 44 MGVPAFYRWLADRYPLSISDVIEEEPSEGPNGVVLPIDVSGPNPNGVEFDNLYLDMNGII 223
MGVPAFYR LADRYPLSISDVIEEEP E NG PIDVS PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRLLADRYPLSISDVIEEEPQEDSNGNSKPIDVSKPNPNGIEFDNLYLDMNGII 60
Query: 224 HPCFHPEGK 250
HPCFHPEGK
Sbjct: 61 HPCFHPEGK 69
>gb|EYU37061.1| hypothetical protein MIMGU_mgv1a002926mg [Mimulus guttatus]
Length = 423
Score = 128 bits (321), Expect = 9e-28
Identities = 56/69 (81%), Positives = 59/69 (85%)
Frame = +2
Query: 44 MGVPAFYRWLADRYPLSISDVIEEEPSEGPNGVVLPIDVSGPNPNGVEFDNLYLDMNGII 223
MGVPAFYRWLADRYP I DV+EEEP NG LP+DVS PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPKCIVDVVEEEPRNAANGAPLPVDVSRPNPNGIEFDNLYLDMNGII 60
Query: 224 HPCFHPEGK 250
HPCFHPEGK
Sbjct: 61 HPCFHPEGK 69
>ref|XP_007144805.1| hypothetical protein PHAVU_007G185300g [Phaseolus vulgaris]
gi|561017995|gb|ESW16799.1| hypothetical protein
PHAVU_007G185300g [Phaseolus vulgaris]
Length = 932
Score = 125 bits (315), Expect = 5e-27
Identities = 56/69 (81%), Positives = 62/69 (89%)
Frame = +2
Query: 44 MGVPAFYRWLADRYPLSISDVIEEEPSEGPNGVVLPIDVSGPNPNGVEFDNLYLDMNGII 223
MGVPAFYRWLADRYPL I+DVIE+EP+ G +GV LPID S PN NG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLCIADVIEDEPAVGDDGVPLPIDASKPNLNGMEFDNLYLDMNGII 60
Query: 224 HPCFHPEGK 250
HPCFHP+GK
Sbjct: 61 HPCFHPDGK 69
>ref|XP_006433057.1| hypothetical protein CICLE_v10000168mg [Citrus clementina]
gi|568835355|ref|XP_006471738.1| PREDICTED: 5'-3'
exoribonuclease 4-like [Citrus sinensis]
gi|557535179|gb|ESR46297.1| hypothetical protein
CICLE_v10000168mg [Citrus clementina]
Length = 959
Score = 125 bits (315), Expect = 5e-27
Identities = 55/69 (79%), Positives = 60/69 (86%)
Frame = +2
Query: 44 MGVPAFYRWLADRYPLSISDVIEEEPSEGPNGVVLPIDVSGPNPNGVEFDNLYLDMNGII 223
MGVPAFYRWLADRYPLSI DV+EE+P GV P+DVS PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMNGII 60
Query: 224 HPCFHPEGK 250
HPCFHP+GK
Sbjct: 61 HPCFHPDGK 69