BLASTX nr result
ID: Cocculus22_contig00031051
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00031051
(277 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containi... 171 7e-41
ref|XP_007215496.1| hypothetical protein PRUPE_ppa006834mg [Prun... 159 5e-37
ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containi... 157 2e-36
dbj|BAJ53230.1| JHL06P13.10 [Jatropha curcas] 151 8e-35
ref|XP_002517613.1| pentatricopeptide repeat-containing protein,... 149 4e-34
gb|EXB67315.1| hypothetical protein L484_025797 [Morus notabilis] 146 3e-33
ref|XP_006427245.1| hypothetical protein CICLE_v10027374mg [Citr... 144 1e-32
ref|XP_007036032.1| Tetratricopeptide repeat (TPR)-like superfam... 144 1e-32
gb|EYU24650.1| hypothetical protein MIMGU_mgv1a020529mg, partial... 140 1e-31
ref|XP_006465489.1| PREDICTED: pentatricopeptide repeat-containi... 140 1e-31
ref|XP_004303323.1| PREDICTED: pentatricopeptide repeat-containi... 139 4e-31
ref|XP_006302357.1| hypothetical protein CARUB_v10020417mg [Caps... 135 8e-30
ref|XP_006389760.1| hypothetical protein EUTSA_v10018671mg [Eutr... 134 1e-29
gb|AAD55488.1|AC009322_28 Hypothetical protein [Arabidopsis thal... 134 2e-29
ref|NP_178132.1| pentatricopeptide repeat-containing protein [Ar... 134 2e-29
dbj|BAC43646.1| unknown protein [Arabidopsis thaliana] gi|289509... 134 2e-29
ref|XP_006348685.1| PREDICTED: pentatricopeptide repeat-containi... 133 2e-29
ref|XP_002889307.1| pentatricopeptide repeat-containing protein ... 133 3e-29
ref|XP_002303255.1| hypothetical protein POPTR_0003s06110g [Popu... 131 8e-29
ref|XP_004239461.1| PREDICTED: pentatricopeptide repeat-containi... 131 1e-28
>ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Vitis vinifera]
Length = 405
Score = 171 bits (434), Expect = 7e-41
Identities = 76/92 (82%), Positives = 83/92 (90%)
Frame = +2
Query: 2 LVKRRRAWQANSLMGTMRFIGINPDEVTYNLVIKGFCQAGYIEMAKRVYSALHGEGYKPN 181
LV RRRAWQANSLMG M ++GI PDEVTYNLVIKGFCQAGY+EMAK+VYSALHG+GYKPN
Sbjct: 261 LVNRRRAWQANSLMGMMEYLGITPDEVTYNLVIKGFCQAGYLEMAKKVYSALHGKGYKPN 320
Query: 182 CKIYQTMIHYLCKSGEFDLAYTFCKDSMGKNW 277
KIYQTMIHYLCK GEFD+AYT CKD M +NW
Sbjct: 321 VKIYQTMIHYLCKGGEFDMAYTMCKDCMNRNW 352
>ref|XP_007215496.1| hypothetical protein PRUPE_ppa006834mg [Prunus persica]
gi|462411646|gb|EMJ16695.1| hypothetical protein
PRUPE_ppa006834mg [Prunus persica]
Length = 393
Score = 159 bits (401), Expect = 5e-37
Identities = 73/92 (79%), Positives = 79/92 (85%)
Frame = +2
Query: 2 LVKRRRAWQANSLMGTMRFIGINPDEVTYNLVIKGFCQAGYIEMAKRVYSALHGEGYKPN 181
LV RRRAW+AN LMG M+ +GI PDEVTYNLVIKGF QA Y+EMAKRVYSALHG+ YKPN
Sbjct: 250 LVNRRRAWEANKLMGLMQNVGITPDEVTYNLVIKGFFQARYLEMAKRVYSALHGKAYKPN 309
Query: 182 CKIYQTMIHYLCKSGEFDLAYTFCKDSMGKNW 277
KIYQTMIHYLCK G+FDLAYT CKD M KNW
Sbjct: 310 IKIYQTMIHYLCKGGDFDLAYTMCKDCMQKNW 341
>ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Cucumis sativus]
gi|449484169|ref|XP_004156805.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Cucumis sativus]
Length = 399
Score = 157 bits (396), Expect = 2e-36
Identities = 72/92 (78%), Positives = 80/92 (86%)
Frame = +2
Query: 2 LVKRRRAWQANSLMGTMRFIGINPDEVTYNLVIKGFCQAGYIEMAKRVYSALHGEGYKPN 181
L++RRRAW AN LM MR IGI PDEVTYNLVIKGFCQAG ++MAKRVYSALHG GYKPN
Sbjct: 256 LIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMAKRVYSALHGSGYKPN 315
Query: 182 CKIYQTMIHYLCKSGEFDLAYTFCKDSMGKNW 277
KIYQTMIHYLCKS +F+LA+T CKD+M KNW
Sbjct: 316 VKIYQTMIHYLCKSEDFNLAHTICKDAMNKNW 347
>dbj|BAJ53230.1| JHL06P13.10 [Jatropha curcas]
Length = 399
Score = 151 bits (382), Expect = 8e-35
Identities = 70/92 (76%), Positives = 77/92 (83%)
Frame = +2
Query: 2 LVKRRRAWQANSLMGTMRFIGINPDEVTYNLVIKGFCQAGYIEMAKRVYSALHGEGYKPN 181
LV R++W+AN +M M+ IGI PD+VTYNLVIKGFC AGY+EMAKRVYSAL GE YKPN
Sbjct: 256 LVNSRQSWEANDVMRLMQRIGIAPDQVTYNLVIKGFCLAGYLEMAKRVYSALQGEVYKPN 315
Query: 182 CKIYQTMIHYLCKSGEFDLAYTFCKDSMGKNW 277
KIYQTMIHYLCK GEFDLAYT CKD MGK W
Sbjct: 316 FKIYQTMIHYLCKGGEFDLAYTMCKDCMGKGW 347
>ref|XP_002517613.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543245|gb|EEF44777.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 400
Score = 149 bits (376), Expect = 4e-34
Identities = 70/92 (76%), Positives = 78/92 (84%)
Frame = +2
Query: 2 LVKRRRAWQANSLMGTMRFIGINPDEVTYNLVIKGFCQAGYIEMAKRVYSALHGEGYKPN 181
LV R++WQAN +M M IGI+PDEVTYNLVIKGF QAGY+EMA+RVYSALHG+GYKPN
Sbjct: 257 LVNIRQSWQANEVMLLMERIGISPDEVTYNLVIKGFGQAGYLEMARRVYSALHGKGYKPN 316
Query: 182 CKIYQTMIHYLCKSGEFDLAYTFCKDSMGKNW 277
KIYQTMIH LCK GEFDLAYT CKD M K+W
Sbjct: 317 VKIYQTMIHCLCKGGEFDLAYTMCKDCMKKSW 348
>gb|EXB67315.1| hypothetical protein L484_025797 [Morus notabilis]
Length = 403
Score = 146 bits (368), Expect = 3e-33
Identities = 66/92 (71%), Positives = 74/92 (80%)
Frame = +2
Query: 2 LVKRRRAWQANSLMGTMRFIGINPDEVTYNLVIKGFCQAGYIEMAKRVYSALHGEGYKPN 181
LV +RRAW+AN +M MR +GI PDEVT+NLVIKGFCQA Y +MAKR YSA GYKPN
Sbjct: 260 LVCKRRAWEANRVMSLMRTLGIAPDEVTFNLVIKGFCQAEYFDMAKRAYSAFRSRGYKPN 319
Query: 182 CKIYQTMIHYLCKSGEFDLAYTFCKDSMGKNW 277
KIYQTMIHYLCK G+F +AYT CKDSM KNW
Sbjct: 320 AKIYQTMIHYLCKEGDFGVAYTMCKDSMQKNW 351
>ref|XP_006427245.1| hypothetical protein CICLE_v10027374mg [Citrus clementina]
gi|557529235|gb|ESR40485.1| hypothetical protein
CICLE_v10027374mg [Citrus clementina]
Length = 409
Score = 144 bits (364), Expect = 1e-32
Identities = 64/92 (69%), Positives = 78/92 (84%)
Frame = +2
Query: 2 LVKRRRAWQANSLMGTMRFIGINPDEVTYNLVIKGFCQAGYIEMAKRVYSALHGEGYKPN 181
LV +RR+WQAN LMG M+ GI PDEVTYNLVIKGFC++G+++MAK+VYSA+ G + PN
Sbjct: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRFMPN 325
Query: 182 CKIYQTMIHYLCKSGEFDLAYTFCKDSMGKNW 277
KIYQTMIHYLC+ G+F+LAYT CKDSM KNW
Sbjct: 326 QKIYQTMIHYLCQEGDFNLAYTMCKDSMKKNW 357
>ref|XP_007036032.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao] gi|508773277|gb|EOY20533.1| Tetratricopeptide
repeat (TPR)-like superfamily protein [Theobroma cacao]
Length = 400
Score = 144 bits (364), Expect = 1e-32
Identities = 70/93 (75%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
Frame = +2
Query: 2 LVKRRRAWQANSLMGTMRFIGINPDEVTYNLVIKGFCQAGYIEMAKRVYSALH-GEGYKP 178
LV RRRAWQAN LM MR IGI PDEVTYNLVIKGFC AGY+EMAKRVYS+L Y+P
Sbjct: 256 LVNRRRAWQANDLMRLMRKIGIVPDEVTYNLVIKGFCLAGYLEMAKRVYSSLEFCREYRP 315
Query: 179 NCKIYQTMIHYLCKSGEFDLAYTFCKDSMGKNW 277
N KIYQTMIHYLCK G+++LAYT CKD M KNW
Sbjct: 316 NIKIYQTMIHYLCKGGDYNLAYTMCKDCMRKNW 348
>gb|EYU24650.1| hypothetical protein MIMGU_mgv1a020529mg, partial [Mimulus
guttatus]
Length = 390
Score = 140 bits (354), Expect = 1e-31
Identities = 68/95 (71%), Positives = 75/95 (78%), Gaps = 3/95 (3%)
Frame = +2
Query: 2 LVKRRRAWQANSLMGTMRF---IGINPDEVTYNLVIKGFCQAGYIEMAKRVYSALHGEGY 172
LV + RAW+AN L+ MR PDEVTYNLVIKGFC+AG+ EMA RVYSALH EGY
Sbjct: 260 LVNKGRAWEANKLLAFMRRHKKFPEFPDEVTYNLVIKGFCRAGFFEMAMRVYSALHKEGY 319
Query: 173 KPNCKIYQTMIHYLCKSGEFDLAYTFCKDSMGKNW 277
KPN KIYQTMIHYLC++GE DLAYT CKDSM KNW
Sbjct: 320 KPNLKIYQTMIHYLCEAGELDLAYTMCKDSMQKNW 354
>ref|XP_006465489.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Citrus sinensis]
Length = 1259
Score = 140 bits (354), Expect = 1e-31
Identities = 63/92 (68%), Positives = 76/92 (82%)
Frame = +2
Query: 2 LVKRRRAWQANSLMGTMRFIGINPDEVTYNLVIKGFCQAGYIEMAKRVYSALHGEGYKPN 181
LV +RR+WQAN LMG M+ GI PDEVTYNLVIKGFC++G+++MAK+VYSA+ G PN
Sbjct: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
Query: 182 CKIYQTMIHYLCKSGEFDLAYTFCKDSMGKNW 277
KIYQTMIHYLC+ G+F+LAY CKDSM KNW
Sbjct: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
>ref|XP_004303323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 406
Score = 139 bits (350), Expect = 4e-31
Identities = 63/92 (68%), Positives = 76/92 (82%)
Frame = +2
Query: 2 LVKRRRAWQANSLMGTMRFIGINPDEVTYNLVIKGFCQAGYIEMAKRVYSALHGEGYKPN 181
LV +RAW+AN +M M+ IGI PDEVT+NLVIKGFCQAG ++MAKRVYS LH +GYKPN
Sbjct: 263 LVDTKRAWEANRVMRMMQNIGIAPDEVTFNLVIKGFCQAGKLDMAKRVYSFLHDKGYKPN 322
Query: 182 CKIYQTMIHYLCKSGEFDLAYTFCKDSMGKNW 277
KIYQTMIHYLC+ +F+LAYT C++ M KNW
Sbjct: 323 VKIYQTMIHYLCRERDFNLAYTICRNCMQKNW 354
>ref|XP_006302357.1| hypothetical protein CARUB_v10020417mg [Capsella rubella]
gi|482571067|gb|EOA35255.1| hypothetical protein
CARUB_v10020417mg [Capsella rubella]
Length = 397
Score = 135 bits (339), Expect = 8e-30
Identities = 61/92 (66%), Positives = 72/92 (78%)
Frame = +2
Query: 2 LVKRRRAWQANSLMGTMRFIGINPDEVTYNLVIKGFCQAGYIEMAKRVYSALHGEGYKPN 181
LV RRRAW AN L+ M + + PD +TYN+VIKGF A + EMA+RVY+A+HG+GYKPN
Sbjct: 257 LVNRRRAWDANDLLLLMPRLHVEPDNITYNMVIKGFFLARFPEMAERVYTAMHGKGYKPN 316
Query: 182 CKIYQTMIHYLCKSGEFDLAYTFCKDSMGKNW 277
KIYQTMIHYLCK+G FDLAYT CKD M K W
Sbjct: 317 LKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKW 348
>ref|XP_006389760.1| hypothetical protein EUTSA_v10018671mg [Eutrema salsugineum]
gi|557086194|gb|ESQ27046.1| hypothetical protein
EUTSA_v10018671mg [Eutrema salsugineum]
Length = 397
Score = 134 bits (338), Expect = 1e-29
Identities = 62/92 (67%), Positives = 73/92 (79%)
Frame = +2
Query: 2 LVKRRRAWQANSLMGTMRFIGINPDEVTYNLVIKGFCQAGYIEMAKRVYSALHGEGYKPN 181
LV RRRAW AN L+ M + + PD VTYN+VIKGF AG+ EMA+RVY+A+HG+GYKPN
Sbjct: 257 LVNRRRAWDANDLLMLMPKLQMEPDSVTYNMVIKGFFLAGFPEMAERVYTAMHGQGYKPN 316
Query: 182 CKIYQTMIHYLCKSGEFDLAYTFCKDSMGKNW 277
KIYQTMIHYLCK+ +FDLAYT CKD M K W
Sbjct: 317 EKIYQTMIHYLCKAKKFDLAYTMCKDCMRKKW 348
>gb|AAD55488.1|AC009322_28 Hypothetical protein [Arabidopsis thaliana]
Length = 419
Score = 134 bits (336), Expect = 2e-29
Identities = 60/92 (65%), Positives = 72/92 (78%)
Frame = +2
Query: 2 LVKRRRAWQANSLMGTMRFIGINPDEVTYNLVIKGFCQAGYIEMAKRVYSALHGEGYKPN 181
LV RRRAW AN L+ M + + PD +TYN+VIKGF A + +MA+RVY+A+HG+GYKPN
Sbjct: 257 LVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPN 316
Query: 182 CKIYQTMIHYLCKSGEFDLAYTFCKDSMGKNW 277
KIYQTMIHYLCK+G FDLAYT CKD M K W
Sbjct: 317 LKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKW 348
>ref|NP_178132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806404|sp|Q8GW57.2|PP134_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g80150, mitochondrial; Flags: Precursor
gi|332198242|gb|AEE36363.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 397
Score = 134 bits (336), Expect = 2e-29
Identities = 60/92 (65%), Positives = 72/92 (78%)
Frame = +2
Query: 2 LVKRRRAWQANSLMGTMRFIGINPDEVTYNLVIKGFCQAGYIEMAKRVYSALHGEGYKPN 181
LV RRRAW AN L+ M + + PD +TYN+VIKGF A + +MA+RVY+A+HG+GYKPN
Sbjct: 257 LVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPN 316
Query: 182 CKIYQTMIHYLCKSGEFDLAYTFCKDSMGKNW 277
KIYQTMIHYLCK+G FDLAYT CKD M K W
Sbjct: 317 LKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKW 348
>dbj|BAC43646.1| unknown protein [Arabidopsis thaliana] gi|28950987|gb|AAO63417.1|
At1g80150 [Arabidopsis thaliana]
Length = 397
Score = 134 bits (336), Expect = 2e-29
Identities = 60/92 (65%), Positives = 72/92 (78%)
Frame = +2
Query: 2 LVKRRRAWQANSLMGTMRFIGINPDEVTYNLVIKGFCQAGYIEMAKRVYSALHGEGYKPN 181
LV RRRAW AN L+ M + + PD +TYN+VIKGF A + +MA+RVY+A+HG+GYKPN
Sbjct: 257 LVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPN 316
Query: 182 CKIYQTMIHYLCKSGEFDLAYTFCKDSMGKNW 277
KIYQTMIHYLCK+G FDLAYT CKD M K W
Sbjct: 317 LKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKW 348
>ref|XP_006348685.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like isoform X1 [Solanum tuberosum]
gi|565363941|ref|XP_006348686.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like isoform X2 [Solanum tuberosum]
Length = 405
Score = 133 bits (335), Expect = 2e-29
Identities = 59/92 (64%), Positives = 73/92 (79%)
Frame = +2
Query: 2 LVKRRRAWQANSLMGTMRFIGINPDEVTYNLVIKGFCQAGYIEMAKRVYSALHGEGYKPN 181
+V R AW+AN L+ M+ IGI PDEVTYNLVIKGF ++MAKR+YSA HG G+KPN
Sbjct: 259 MVNMRFAWEANKLLQLMKRIGITPDEVTYNLVIKGFFLVENLQMAKRIYSAFHGAGFKPN 318
Query: 182 CKIYQTMIHYLCKSGEFDLAYTFCKDSMGKNW 277
+IYQTMIHYLC++G+FDLAY+ CK+SM NW
Sbjct: 319 SRIYQTMIHYLCRAGDFDLAYSMCKESMKNNW 350
>ref|XP_002889307.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335148|gb|EFH65566.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 397
Score = 133 bits (334), Expect = 3e-29
Identities = 60/92 (65%), Positives = 71/92 (77%)
Frame = +2
Query: 2 LVKRRRAWQANSLMGTMRFIGINPDEVTYNLVIKGFCQAGYIEMAKRVYSALHGEGYKPN 181
LV RRRAW AN L+ M + + PD +TYN+VIKGF A + MA+RVY+A+HG+GYKPN
Sbjct: 257 LVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPHMAERVYTAMHGKGYKPN 316
Query: 182 CKIYQTMIHYLCKSGEFDLAYTFCKDSMGKNW 277
KIYQTMIHYLCK+G FDLAYT CKD M K W
Sbjct: 317 VKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKW 348
>ref|XP_002303255.1| hypothetical protein POPTR_0003s06110g [Populus trichocarpa]
gi|566161125|ref|XP_006385501.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
gi|222840687|gb|EEE78234.1| hypothetical protein
POPTR_0003s06110g [Populus trichocarpa]
gi|550342523|gb|ERP63298.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
Length = 401
Score = 131 bits (330), Expect = 8e-29
Identities = 62/92 (67%), Positives = 70/92 (76%)
Frame = +2
Query: 2 LVKRRRAWQANSLMGTMRFIGINPDEVTYNLVIKGFCQAGYIEMAKRVYSALHGEGYKPN 181
LV RRAW AN +M M IGI PDEVTYNLVIKGF Q G +EMAK VY +L G+G+K N
Sbjct: 258 LVNIRRAWHANDVMRLMLKIGIVPDEVTYNLVIKGFFQTGKLEMAKMVYFSLRGKGHKFN 317
Query: 182 CKIYQTMIHYLCKSGEFDLAYTFCKDSMGKNW 277
K+YQTM+HYLCK GEFDLAYT C+D M NW
Sbjct: 318 VKVYQTMVHYLCKGGEFDLAYTMCRDCMRNNW 349
>ref|XP_004239461.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Solanum lycopersicum]
Length = 405
Score = 131 bits (329), Expect = 1e-28
Identities = 58/92 (63%), Positives = 72/92 (78%)
Frame = +2
Query: 2 LVKRRRAWQANSLMGTMRFIGINPDEVTYNLVIKGFCQAGYIEMAKRVYSALHGEGYKPN 181
+V R AW+AN L+ M+ IGI PDEVTYNLVIKGF + MAKR+YSA HG G+KPN
Sbjct: 259 MVNMRFAWEANKLLQLMKRIGITPDEVTYNLVIKGFFLVENLPMAKRIYSAFHGAGFKPN 318
Query: 182 CKIYQTMIHYLCKSGEFDLAYTFCKDSMGKNW 277
+IYQTMIHYLC++G+FDL+Y+ CK+SM NW
Sbjct: 319 SRIYQTMIHYLCRAGDFDLSYSMCKESMENNW 350