BLASTX nr result
ID: Cocculus22_contig00031024
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00031024
(307 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB60119.1| Replication factor C subunit 4 [Morus notabilis] 136 3e-30
ref|XP_002307456.1| replication factor C 37 kDa family protein [... 133 3e-29
ref|XP_007019151.1| ATPase family associated with various cellul... 132 5e-29
ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [V... 130 2e-28
ref|XP_002285875.1| PREDICTED: replication factor C subunit 4 is... 130 2e-28
ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 is... 130 2e-28
emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera] 130 2e-28
ref|XP_002520330.1| replication factor C / DNA polymerase III ga... 130 2e-28
ref|XP_006472822.1| PREDICTED: replication factor C subunit 4-li... 129 4e-28
ref|XP_006434256.1| hypothetical protein CICLE_v10001485mg [Citr... 126 4e-27
ref|XP_006351139.1| PREDICTED: replication factor C subunit 2-li... 125 5e-27
ref|XP_004250308.1| PREDICTED: replication factor C subunit 4-li... 125 5e-27
ref|XP_004290901.1| PREDICTED: replication factor C subunit 4-li... 123 2e-26
ref|XP_006386362.1| hypothetical protein POPTR_0002s08060g [Popu... 122 5e-26
ref|XP_007163930.1| hypothetical protein PHAVU_L0048000g, partia... 122 7e-26
ref|XP_007137452.1| hypothetical protein PHAVU_009G1281001g, par... 122 7e-26
ref|XP_003602047.1| Replication factor C subunit [Medicago trunc... 122 7e-26
ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-li... 121 9e-26
ref|XP_006829310.1| hypothetical protein AMTR_s00202p00012570, p... 120 2e-25
ref|XP_004502518.1| PREDICTED: replication factor C subunit 4-li... 119 6e-25
>gb|EXB60119.1| Replication factor C subunit 4 [Morus notabilis]
Length = 309
Score = 136 bits (343), Expect = 3e-30
Identities = 64/76 (84%), Positives = 70/76 (92%)
Frame = -2
Query: 306 NNVIAEGYPASQMLSQLFDIVVEANDISDEQKARICSKLAEADKCLVDGADEYLQLMDVS 127
NNVIAEGYP SQM SQLFD++VEA+D+SDEQKARIC KL EADKCLVDGADEYLQL+DVS
Sbjct: 234 NNVIAEGYPVSQMFSQLFDVIVEADDLSDEQKARICRKLGEADKCLVDGADEYLQLLDVS 293
Query: 126 SNTMRALCNMPQEFSY 79
NTMRALCNM +EFSY
Sbjct: 294 GNTMRALCNMSEEFSY 309
>ref|XP_002307456.1| replication factor C 37 kDa family protein [Populus trichocarpa]
gi|222856905|gb|EEE94452.1| replication factor C 37 kDa
family protein [Populus trichocarpa]
Length = 342
Score = 133 bits (334), Expect = 3e-29
Identities = 63/76 (82%), Positives = 70/76 (92%)
Frame = -2
Query: 306 NNVIAEGYPASQMLSQLFDIVVEANDISDEQKARICSKLAEADKCLVDGADEYLQLMDVS 127
N+VIAEGYP SQML+QLF++VVE +DISDEQKARIC LA ADKCLVDGADEYLQL+DV
Sbjct: 265 NDVIAEGYPVSQMLAQLFEVVVEVDDISDEQKARICKSLATADKCLVDGADEYLQLLDVV 324
Query: 126 SNTMRALCNMPQEFSY 79
SNTMR+LCNMPQEFSY
Sbjct: 325 SNTMRSLCNMPQEFSY 340
>ref|XP_007019151.1| ATPase family associated with various cellular activities (AAA)
[Theobroma cacao] gi|508724479|gb|EOY16376.1| ATPase
family associated with various cellular activities (AAA)
[Theobroma cacao]
Length = 345
Score = 132 bits (332), Expect = 5e-29
Identities = 64/76 (84%), Positives = 70/76 (92%)
Frame = -2
Query: 306 NNVIAEGYPASQMLSQLFDIVVEANDISDEQKARICSKLAEADKCLVDGADEYLQLMDVS 127
NNVIAEG+P SQMLSQLFD+VVEA+DI DEQKARIC LAEADK LVDGADEYLQL+DV+
Sbjct: 268 NNVIAEGFPVSQMLSQLFDVVVEADDIPDEQKARICKSLAEADKRLVDGADEYLQLLDVA 327
Query: 126 SNTMRALCNMPQEFSY 79
SNTMRALCNMPQEF +
Sbjct: 328 SNTMRALCNMPQEFCF 343
>ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [Vitis vinifera]
Length = 334
Score = 130 bits (327), Expect = 2e-28
Identities = 64/76 (84%), Positives = 70/76 (92%)
Frame = -2
Query: 306 NNVIAEGYPASQMLSQLFDIVVEANDISDEQKARICSKLAEADKCLVDGADEYLQLMDVS 127
NNVIAEGYP SQML QLFD+VVEA DISDEQKARIC +LAEADKCLVDGADEYLQL+DV+
Sbjct: 258 NNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARICKRLAEADKCLVDGADEYLQLLDVA 316
Query: 126 SNTMRALCNMPQEFSY 79
SN MRALCNMP+EF +
Sbjct: 317 SNAMRALCNMPEEFPH 332
>ref|XP_002285875.1| PREDICTED: replication factor C subunit 4 isoform 2 [Vitis
vinifera]
Length = 329
Score = 130 bits (327), Expect = 2e-28
Identities = 64/76 (84%), Positives = 70/76 (92%)
Frame = -2
Query: 306 NNVIAEGYPASQMLSQLFDIVVEANDISDEQKARICSKLAEADKCLVDGADEYLQLMDVS 127
NNVIAEGYP SQML QLFD+VVEA DISDEQKARIC +LAEADKCLVDGADEYLQL+DV+
Sbjct: 253 NNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARICKRLAEADKCLVDGADEYLQLLDVA 311
Query: 126 SNTMRALCNMPQEFSY 79
SN MRALCNMP+EF +
Sbjct: 312 SNAMRALCNMPEEFPH 327
>ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 isoform 1 [Vitis
vinifera] gi|302141781|emb|CBI18984.3| unnamed protein
product [Vitis vinifera]
Length = 341
Score = 130 bits (327), Expect = 2e-28
Identities = 64/76 (84%), Positives = 70/76 (92%)
Frame = -2
Query: 306 NNVIAEGYPASQMLSQLFDIVVEANDISDEQKARICSKLAEADKCLVDGADEYLQLMDVS 127
NNVIAEGYP SQML QLFD+VVEA DISDEQKARIC +LAEADKCLVDGADEYLQL+DV+
Sbjct: 265 NNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARICKRLAEADKCLVDGADEYLQLLDVA 323
Query: 126 SNTMRALCNMPQEFSY 79
SN MRALCNMP+EF +
Sbjct: 324 SNAMRALCNMPEEFPH 339
>emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
Length = 341
Score = 130 bits (327), Expect = 2e-28
Identities = 64/76 (84%), Positives = 70/76 (92%)
Frame = -2
Query: 306 NNVIAEGYPASQMLSQLFDIVVEANDISDEQKARICSKLAEADKCLVDGADEYLQLMDVS 127
NNVIAEGYP SQML QLFD+VVEA DISDEQKARIC +LAEADKCLVDGADEYLQL+DV+
Sbjct: 265 NNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARICKRLAEADKCLVDGADEYLQLLDVA 323
Query: 126 SNTMRALCNMPQEFSY 79
SN MRALCNMP+EF +
Sbjct: 324 SNAMRALCNMPEEFPH 339
>ref|XP_002520330.1| replication factor C / DNA polymerase III gamma-tau subunit,
putative [Ricinus communis] gi|223540549|gb|EEF42116.1|
replication factor C / DNA polymerase III gamma-tau
subunit, putative [Ricinus communis]
Length = 342
Score = 130 bits (326), Expect = 2e-28
Identities = 61/76 (80%), Positives = 68/76 (89%)
Frame = -2
Query: 306 NNVIAEGYPASQMLSQLFDIVVEANDISDEQKARICSKLAEADKCLVDGADEYLQLMDVS 127
NN+IAEGYP SQML QL ++VVEA+DISDEQKA+IC L ADKCLVDGADEYLQL+DV+
Sbjct: 265 NNIIAEGYPVSQMLVQLLEVVVEADDISDEQKAQICKSLGAADKCLVDGADEYLQLLDVA 324
Query: 126 SNTMRALCNMPQEFSY 79
SNTMRALCNMPQEF Y
Sbjct: 325 SNTMRALCNMPQEFPY 340
>ref|XP_006472822.1| PREDICTED: replication factor C subunit 4-like isoform X1 [Citrus
sinensis]
Length = 342
Score = 129 bits (324), Expect = 4e-28
Identities = 60/76 (78%), Positives = 68/76 (89%)
Frame = -2
Query: 306 NNVIAEGYPASQMLSQLFDIVVEANDISDEQKARICSKLAEADKCLVDGADEYLQLMDVS 127
NN+IAEGYPAS +LSQLFD+VVE DISDEQKARIC LAE DKCLVDGADEYLQL+DV+
Sbjct: 265 NNIIAEGYPASLLLSQLFDVVVETEDISDEQKARICKCLAEVDKCLVDGADEYLQLLDVA 324
Query: 126 SNTMRALCNMPQEFSY 79
SN +RA+CNMP+EF Y
Sbjct: 325 SNVIRAVCNMPEEFQY 340
>ref|XP_006434256.1| hypothetical protein CICLE_v10001485mg [Citrus clementina]
gi|557536378|gb|ESR47496.1| hypothetical protein
CICLE_v10001485mg [Citrus clementina]
Length = 382
Score = 126 bits (316), Expect = 4e-27
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = -2
Query: 306 NNVIAEGYPASQMLSQLFDIVVEANDISDEQKARICSKLAEADKCLVDGADEYLQLMDVS 127
NN+IAEGYPAS +LSQLFD+VVE DISDEQ+ARIC LA+ DKCLVDGADEYLQL+DV+
Sbjct: 305 NNIIAEGYPASLLLSQLFDVVVETEDISDEQQARICKCLAKVDKCLVDGADEYLQLLDVA 364
Query: 126 SNTMRALCNMPQEFSY 79
SN +RA+CNMP+EF Y
Sbjct: 365 SNVIRAVCNMPEEFQY 380
>ref|XP_006351139.1| PREDICTED: replication factor C subunit 2-like [Solanum tuberosum]
Length = 339
Score = 125 bits (315), Expect = 5e-27
Identities = 60/76 (78%), Positives = 70/76 (92%)
Frame = -2
Query: 306 NNVIAEGYPASQMLSQLFDIVVEANDISDEQKARICSKLAEADKCLVDGADEYLQLMDVS 127
NNVIAEGYP SQMLSQL+DIVV+A+DISDEQKARIC K AEADKCLVDGADEYLQL++V
Sbjct: 264 NNVIAEGYPVSQMLSQLYDIVVDADDISDEQKARICKKFAEADKCLVDGADEYLQLLNVV 323
Query: 126 SNTMRALCNMPQEFSY 79
S+TM+AL NMPQ+ ++
Sbjct: 324 SSTMQALSNMPQDMAF 339
>ref|XP_004250308.1| PREDICTED: replication factor C subunit 4-like [Solanum
lycopersicum]
Length = 339
Score = 125 bits (315), Expect = 5e-27
Identities = 59/76 (77%), Positives = 71/76 (93%)
Frame = -2
Query: 306 NNVIAEGYPASQMLSQLFDIVVEANDISDEQKARICSKLAEADKCLVDGADEYLQLMDVS 127
NNVIAEGYP SQMLSQL+DI+V+A+DISDEQKARIC K AEADKCLVDGADEYLQL++V+
Sbjct: 264 NNVIAEGYPVSQMLSQLYDILVDADDISDEQKARICKKFAEADKCLVDGADEYLQLLNVA 323
Query: 126 SNTMRALCNMPQEFSY 79
S+TM+AL NMPQ+ ++
Sbjct: 324 SSTMQALSNMPQDMTF 339
>ref|XP_004290901.1| PREDICTED: replication factor C subunit 4-like [Fragaria vesca
subsp. vesca]
Length = 339
Score = 123 bits (309), Expect = 2e-26
Identities = 60/75 (80%), Positives = 68/75 (90%)
Frame = -2
Query: 306 NNVIAEGYPASQMLSQLFDIVVEANDISDEQKARICSKLAEADKCLVDGADEYLQLMDVS 127
NNVIAEGYP SQM SQLFDIVVEA+DISDEQ ARIC KL EADK LVDG+DEYLQL+DV+
Sbjct: 265 NNVIAEGYPVSQMFSQLFDIVVEADDISDEQIARICKKLGEADKRLVDGSDEYLQLLDVA 324
Query: 126 SNTMRALCNMPQEFS 82
S+TMRA+CNM ++FS
Sbjct: 325 SSTMRAICNMQEDFS 339
>ref|XP_006386362.1| hypothetical protein POPTR_0002s08060g [Populus trichocarpa]
gi|550344527|gb|ERP64159.1| hypothetical protein
POPTR_0002s08060g [Populus trichocarpa]
Length = 333
Score = 122 bits (306), Expect = 5e-26
Identities = 56/76 (73%), Positives = 69/76 (90%)
Frame = -2
Query: 306 NNVIAEGYPASQMLSQLFDIVVEANDISDEQKARICSKLAEADKCLVDGADEYLQLMDVS 127
NN+IAEGYP SQ+L+QLF++VVEA+D+S+E+KA +C LA ADKCL+DGADEYLQL+DV+
Sbjct: 256 NNIIAEGYPVSQILAQLFEVVVEADDLSNERKACMCKSLATADKCLIDGADEYLQLLDVA 315
Query: 126 SNTMRALCNMPQEFSY 79
SNTMRALCNMPQE Y
Sbjct: 316 SNTMRALCNMPQERYY 331
>ref|XP_007163930.1| hypothetical protein PHAVU_L0048000g, partial [Phaseolus vulgaris]
gi|561039780|gb|ESW35924.1| hypothetical protein
PHAVU_L0048000g, partial [Phaseolus vulgaris]
Length = 104
Score = 122 bits (305), Expect = 7e-26
Identities = 59/76 (77%), Positives = 66/76 (86%)
Frame = -2
Query: 306 NNVIAEGYPASQMLSQLFDIVVEANDISDEQKARICSKLAEADKCLVDGADEYLQLMDVS 127
NN IAEGYPASQML+QLF+ +VE NDISDEQKARI KL EADKCLVDGADEYLQL+DV
Sbjct: 27 NNFIAEGYPASQMLTQLFEAIVEDNDISDEQKARISKKLGEADKCLVDGADEYLQLLDVV 86
Query: 126 SNTMRALCNMPQEFSY 79
SNTM+A NMP+ F+Y
Sbjct: 87 SNTMQAFSNMPEGFAY 102
>ref|XP_007137452.1| hypothetical protein PHAVU_009G1281001g, partial [Phaseolus
vulgaris] gi|561010539|gb|ESW09446.1| hypothetical
protein PHAVU_009G1281001g, partial [Phaseolus vulgaris]
Length = 124
Score = 122 bits (305), Expect = 7e-26
Identities = 59/76 (77%), Positives = 66/76 (86%)
Frame = -2
Query: 306 NNVIAEGYPASQMLSQLFDIVVEANDISDEQKARICSKLAEADKCLVDGADEYLQLMDVS 127
NN IAEGYPASQML+QLF+ +VE NDISDEQKARI KL EADKCLVDGADEYLQL+DV
Sbjct: 47 NNFIAEGYPASQMLTQLFEAIVEDNDISDEQKARISKKLGEADKCLVDGADEYLQLLDVV 106
Query: 126 SNTMRALCNMPQEFSY 79
SNTM+A NMP+ F+Y
Sbjct: 107 SNTMQAFSNMPEGFAY 122
>ref|XP_003602047.1| Replication factor C subunit [Medicago truncatula]
gi|357520353|ref|XP_003630465.1| Replication factor C
subunit [Medicago truncatula]
gi|217073528|gb|ACJ85124.1| unknown [Medicago
truncatula] gi|355491095|gb|AES72298.1| Replication
factor C subunit [Medicago truncatula]
gi|355524487|gb|AET04941.1| Replication factor C subunit
[Medicago truncatula] gi|388492316|gb|AFK34224.1|
unknown [Medicago truncatula]
Length = 339
Score = 122 bits (305), Expect = 7e-26
Identities = 58/75 (77%), Positives = 66/75 (88%)
Frame = -2
Query: 306 NNVIAEGYPASQMLSQLFDIVVEANDISDEQKARICSKLAEADKCLVDGADEYLQLMDVS 127
NN IAEGYP SQML+QLF+ +VE NDISDEQKARI KL EADKCLVDGADEYLQL+DV
Sbjct: 265 NNFIAEGYPVSQMLTQLFEAIVEENDISDEQKARISKKLGEADKCLVDGADEYLQLLDVV 324
Query: 126 SNTMRALCNMPQEFS 82
SNT++ALCNMP+ F+
Sbjct: 325 SNTIQALCNMPEGFA 339
>ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-like isoformX1 [Glycine
max] gi|571452162|ref|XP_006578961.1| PREDICTED:
replication factor C subunit 4-like isoform X2 [Glycine
max] gi|571452164|ref|XP_006578962.1| PREDICTED:
replication factor C subunit 4-like isoform X3 [Glycine
max]
Length = 342
Score = 121 bits (304), Expect = 9e-26
Identities = 58/76 (76%), Positives = 66/76 (86%)
Frame = -2
Query: 306 NNVIAEGYPASQMLSQLFDIVVEANDISDEQKARICSKLAEADKCLVDGADEYLQLMDVS 127
NN IAEGYPASQML+QLF+ +VE ND+SDEQKARI KL EADKCLVDGADEYLQL+DV
Sbjct: 265 NNFIAEGYPASQMLTQLFESIVEDNDLSDEQKARISKKLGEADKCLVDGADEYLQLLDVV 324
Query: 126 SNTMRALCNMPQEFSY 79
SNTM+A NMP+ F+Y
Sbjct: 325 SNTMKAFSNMPETFAY 340
>ref|XP_006829310.1| hypothetical protein AMTR_s00202p00012570, partial [Amborella
trichopoda] gi|548834330|gb|ERM96726.1| hypothetical
protein AMTR_s00202p00012570, partial [Amborella
trichopoda]
Length = 341
Score = 120 bits (302), Expect = 2e-25
Identities = 57/74 (77%), Positives = 67/74 (90%)
Frame = -2
Query: 303 NVIAEGYPASQMLSQLFDIVVEANDISDEQKARICSKLAEADKCLVDGADEYLQLMDVSS 124
N+ AEGYP SQ+LSQLFD+VV DISDEQKARI +++AEADK L+DGADEYLQL+DV+S
Sbjct: 267 NITAEGYPVSQLLSQLFDMVVGTTDISDEQKARIFNRIAEADKYLIDGADEYLQLLDVAS 326
Query: 123 NTMRALCNMPQEFS 82
NTMRA+CNMPQEFS
Sbjct: 327 NTMRAICNMPQEFS 340
>ref|XP_004502518.1| PREDICTED: replication factor C subunit 4-like [Cicer arietinum]
Length = 341
Score = 119 bits (297), Expect = 6e-25
Identities = 56/76 (73%), Positives = 66/76 (86%)
Frame = -2
Query: 306 NNVIAEGYPASQMLSQLFDIVVEANDISDEQKARICSKLAEADKCLVDGADEYLQLMDVS 127
NN IAEGYP SQ+L+QLF+ +VE NDISDEQKARI KL EADKCLVDGADEYLQL+ V
Sbjct: 265 NNFIAEGYPVSQILTQLFEAIVEENDISDEQKARISKKLGEADKCLVDGADEYLQLLAVV 324
Query: 126 SNTMRALCNMPQEFSY 79
SNT++ALCN+P+ F+Y
Sbjct: 325 SNTIQALCNLPEGFAY 340