BLASTX nr result
ID: Cocculus22_contig00030841
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00030841
(295 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006469338.1| PREDICTED: putative pentatricopeptide repeat... 61 2e-07
ref|XP_006447959.1| hypothetical protein CICLE_v10014595mg [Citr... 61 2e-07
ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 59 7e-07
ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat... 59 7e-07
ref|XP_006422555.1| hypothetical protein CICLE_v10030410mg [Citr... 58 1e-06
ref|XP_006486706.1| PREDICTED: pentatricopeptide repeat-containi... 57 2e-06
ref|XP_006826306.1| hypothetical protein AMTR_s00004p00076010 [A... 57 2e-06
ref|XP_007050470.1| Tetratricopeptide repeat-like superfamily pr... 57 3e-06
ref|XP_006443406.1| hypothetical protein CICLE_v10018850mg [Citr... 57 4e-06
ref|XP_002974330.1| hypothetical protein SELMODRAFT_50864 [Selag... 57 4e-06
ref|XP_002306200.1| hypothetical protein POPTR_0004s18470g [Popu... 57 4e-06
ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containi... 56 5e-06
gb|ACU21163.1| unknown [Glycine max] 56 5e-06
ref|XP_002512657.1| pentatricopeptide repeat-containing protein,... 56 6e-06
ref|XP_004305395.1| PREDICTED: pentatricopeptide repeat-containi... 55 8e-06
ref|XP_002968550.1| hypothetical protein SELMODRAFT_89343 [Selag... 55 8e-06
>ref|XP_006469338.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Citrus sinensis]
Length = 631
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/75 (40%), Positives = 49/75 (65%)
Frame = +1
Query: 13 VRNGMYQEALQLYFQIICEDIESDPCVLSWAIDACAGIKGLKEGREIHGRAIKAGYVRYE 192
V NG Y +A++LY+Q++ E + D +S A+ AC + GL+EGREIHG+ +K G +R
Sbjct: 102 VSNGSYADAIRLYYQMVEESVLPDNYAVSSALKACGFLLGLREGREIHGQVLKLG-LRSN 160
Query: 193 EALVVSLVKMYREFG 237
+ + LV++Y + G
Sbjct: 161 RSTRLKLVELYGKCG 175
>ref|XP_006447959.1| hypothetical protein CICLE_v10014595mg [Citrus clementina]
gi|557550570|gb|ESR61199.1| hypothetical protein
CICLE_v10014595mg [Citrus clementina]
Length = 631
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/75 (40%), Positives = 49/75 (65%)
Frame = +1
Query: 13 VRNGMYQEALQLYFQIICEDIESDPCVLSWAIDACAGIKGLKEGREIHGRAIKAGYVRYE 192
V NG Y +A++LY+Q++ E + D +S A+ AC + GL+EGREIHG+ +K G +R
Sbjct: 102 VSNGSYADAIRLYYQMVEESVLPDNYAVSSALKACGFLLGLREGREIHGQVLKLG-LRSN 160
Query: 193 EALVVSLVKMYREFG 237
+ + LV++Y + G
Sbjct: 161 RSTRLKLVELYGKCG 175
>ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g69350, mitochondrial-like
[Cucumis sativus]
Length = 804
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = +1
Query: 13 VRNGMYQEALQLYFQIICEDIESDPCVLSWAIDACAGIKGLKEGREIHGRAIKAGYVRYE 192
V NG YQEA+ LY Q++ + I+++ + AC+G L G+ +HGR IK+G+ +
Sbjct: 75 VWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGF-DMD 133
Query: 193 EALVVSLVKMYREFGLVDEVHKV 261
+ +L+ +Y E G +D KV
Sbjct: 134 PVVNTALLSVYGELGYLDSARKV 156
>ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Cucumis sativus]
Length = 804
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = +1
Query: 13 VRNGMYQEALQLYFQIICEDIESDPCVLSWAIDACAGIKGLKEGREIHGRAIKAGYVRYE 192
V NG YQEA+ LY Q++ + I+++ + AC+G L G+ +HGR IK+G+ +
Sbjct: 75 VWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGF-DMD 133
Query: 193 EALVVSLVKMYREFGLVDEVHKV 261
+ +L+ +Y E G +D KV
Sbjct: 134 PVVNTALLSVYGELGYLDSARKV 156
>ref|XP_006422555.1| hypothetical protein CICLE_v10030410mg [Citrus clementina]
gi|557524489|gb|ESR35795.1| hypothetical protein
CICLE_v10030410mg [Citrus clementina]
Length = 810
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/83 (33%), Positives = 50/83 (60%)
Frame = +1
Query: 13 VRNGMYQEALQLYFQIICEDIESDPCVLSWAIDACAGIKGLKEGREIHGRAIKAGYVRYE 192
V NG++QEA++ + +++CE ++D + I ACAG+ L EG ++HG K+G + +
Sbjct: 110 VDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSG-LNSD 168
Query: 193 EALVVSLVKMYREFGLVDEVHKV 261
+ SL+ MY + G V+ +V
Sbjct: 169 VYVCNSLIVMYMKLGCVECAERV 191
>ref|XP_006486706.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Citrus sinensis]
Length = 810
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/78 (34%), Positives = 48/78 (61%)
Frame = +1
Query: 13 VRNGMYQEALQLYFQIICEDIESDPCVLSWAIDACAGIKGLKEGREIHGRAIKAGYVRYE 192
V NG++QEA++ + +++CE ++D + I ACAG+ L EG ++HG K+G + +
Sbjct: 110 VDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSG-LNSD 168
Query: 193 EALVVSLVKMYREFGLVD 246
+ SL+ MY + G V+
Sbjct: 169 VYVCNSLIVMYMKLGCVE 186
>ref|XP_006826306.1| hypothetical protein AMTR_s00004p00076010 [Amborella trichopoda]
gi|548830620|gb|ERM93543.1| hypothetical protein
AMTR_s00004p00076010 [Amborella trichopoda]
Length = 676
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/74 (36%), Positives = 50/74 (67%)
Frame = +1
Query: 37 ALQLYFQIICEDIESDPCVLSWAIDACAGIKGLKEGREIHGRAIKAGYVRYEEALVVSLV 216
AL+L+ ++ + IESD + A+ ACAG++ +K+G++IH R+I GY + ++ SL+
Sbjct: 499 ALELFEEMQAQGIESDNIGFASALSACAGLQAIKQGQQIHARSIVCGYFS-DISIGNSLI 557
Query: 217 KMYREFGLVDEVHK 258
+Y + GL++E +K
Sbjct: 558 TLYAKMGLIEEAYK 571
>ref|XP_007050470.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508702731|gb|EOX94627.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 966
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/85 (36%), Positives = 48/85 (56%)
Frame = +1
Query: 13 VRNGMYQEALQLYFQIICEDIESDPCVLSWAIDACAGIKGLKEGREIHGRAIKAGYVRYE 192
VRNG+ EAL+L+ + I+ D L + + + GLK G+EIH I+ G++ E
Sbjct: 570 VRNGLANEALKLFHIMNKTGIQPDSVALISLLSGASNLSGLKNGKEIHSFVIRKGFI-LE 628
Query: 193 EALVVSLVKMYREFGLVDEVHKVSK 267
++ SLV MY G+V+ +KV K
Sbjct: 629 GSIASSLVDMYSHCGMVENAYKVFK 653
>ref|XP_006443406.1| hypothetical protein CICLE_v10018850mg [Citrus clementina]
gi|557545668|gb|ESR56646.1| hypothetical protein
CICLE_v10018850mg [Citrus clementina]
Length = 840
Score = 56.6 bits (135), Expect = 4e-06
Identities = 31/87 (35%), Positives = 55/87 (63%), Gaps = 5/87 (5%)
Frame = +1
Query: 13 VRNGMYQEALQLYFQIICEDIESDPCVLSWAIDACAGIKGLKEGREIHGRAIKAGY---V 183
V++GM+ EAL+L+ ++ + I+SD S AI ACAGI+ L +GR+IH ++ +G+ +
Sbjct: 493 VQHGMFGEALELFEEMENQGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYISGFSDDL 552
Query: 184 RYEEALVV--SLVKMYREFGLVDEVHK 258
AL+ SL+ +Y + G +D+ +
Sbjct: 553 SIGNALITSNSLITLYAKCGSIDDAKR 579
>ref|XP_002974330.1| hypothetical protein SELMODRAFT_50864 [Selaginella moellendorffii]
gi|300157928|gb|EFJ24552.1| hypothetical protein
SELMODRAFT_50864 [Selaginella moellendorffii]
Length = 720
Score = 56.6 bits (135), Expect = 4e-06
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Frame = +1
Query: 16 RNGMYQEALQLYFQIICEDIESDPCVLSWAIDACAGI----KGLKEGREIHGRAIKAGYV 183
RNG +EA++++ ++ I D L A+D C G+ +GLK+GREIH R G++
Sbjct: 72 RNGFGEEAVEVFHEMALVGIPPDKYTLISALDGCCGLSCPDRGLKKGREIHRRIQSIGFM 131
Query: 184 RYEEALVVSLVKMYREFGLVDEVHKV 261
+ AL L+KMY +FG V E ++
Sbjct: 132 S-DVALQTGLIKMYGKFGEVIEARRL 156
>ref|XP_002306200.1| hypothetical protein POPTR_0004s18470g [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| hypothetical protein
POPTR_0004s18470g [Populus trichocarpa]
Length = 784
Score = 56.6 bits (135), Expect = 4e-06
Identities = 27/81 (33%), Positives = 46/81 (56%)
Frame = +1
Query: 19 NGMYQEALQLYFQIICEDIESDPCVLSWAIDACAGIKGLKEGREIHGRAIKAGYVRYEEA 198
NG++QEA+ Y+++ CE I SD + I AC + L G+++HG+ IK G+ +
Sbjct: 102 NGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGF-DLDVY 160
Query: 199 LVVSLVKMYREFGLVDEVHKV 261
+ L+ MY + G ++ KV
Sbjct: 161 VCNFLIDMYLKIGFIELAEKV 181
>ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic-like [Glycine max]
Length = 526
Score = 56.2 bits (134), Expect = 5e-06
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = +1
Query: 22 GMYQEALQLYFQIICEDIESDPCVLSWAIDACAGIKGLKEGREIHGRAIKAGYVRYEEAL 201
G Y EA+ LYFQ++ E +E+D + CAGI ++ G E+H AI+AG+ + +
Sbjct: 172 GHYDEAIALYFQMVEEGVEADLFTFPRVLKVCAGIGSVQVGEEVHRHAIRAGFAA-DGFI 230
Query: 202 VVSLVKMYREFGLVDEVHKV-SKYHRRD 282
+ +LV MY + G + + KV K RD
Sbjct: 231 LNALVDMYSKCGDIVKARKVFDKMPHRD 258
>gb|ACU21163.1| unknown [Glycine max]
Length = 481
Score = 56.2 bits (134), Expect = 5e-06
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = +1
Query: 22 GMYQEALQLYFQIICEDIESDPCVLSWAIDACAGIKGLKEGREIHGRAIKAGYVRYEEAL 201
G Y EA+ LYFQ++ E +E+D + CAGI ++ G E+H AI+AG+ + +
Sbjct: 172 GHYDEAIALYFQMVEEGVEADLFTFPRVLKVCAGIGSVQVGEEVHRHAIRAGFAA-DGFI 230
Query: 202 VVSLVKMYREFGLVDEVHKV-SKYHRRD 282
+ +LV MY + G + + KV K RD
Sbjct: 231 LNALVDMYSKCGDIVKARKVFDKMPHRD 258
>ref|XP_002512657.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548618|gb|EEF50109.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 837
Score = 55.8 bits (133), Expect = 6e-06
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +1
Query: 22 GMYQEALQLYFQIICEDIESDPCVLSWAIDACAGIKGLKEGREIHGRAIKAGYVRYEEAL 201
G + AL L+ +++CED+E D V S ++ ACAG+K L GR+IHG +K G + E ++
Sbjct: 271 GKQKNALDLFAKMVCEDVELDEYVFSISLKACAGLKELSFGRQIHGHIVKLG-LESEVSV 329
Query: 202 VVSLVKMY 225
LV Y
Sbjct: 330 GTPLVDFY 337
>ref|XP_004305395.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Fragaria vesca subsp. vesca]
Length = 663
Score = 55.5 bits (132), Expect = 8e-06
Identities = 29/81 (35%), Positives = 48/81 (59%)
Frame = +1
Query: 13 VRNGMYQEALQLYFQIICEDIESDPCVLSWAIDACAGIKGLKEGREIHGRAIKAGYVRYE 192
V NG+Y+EA+ L+ + +E + +S AI ACAG+ L EG+++H K G+ R
Sbjct: 267 VLNGLYEEAVLLFHRARMIGLEHNQFTISSAICACAGLAALIEGKQVHALLFKTGF-RLN 325
Query: 193 EALVVSLVKMYREFGLVDEVH 255
+V SL+ MY + G ++E +
Sbjct: 326 IYIVSSLIDMYSKCGSIEEAY 346
>ref|XP_002968550.1| hypothetical protein SELMODRAFT_89343 [Selaginella moellendorffii]
gi|300164194|gb|EFJ30804.1| hypothetical protein
SELMODRAFT_89343 [Selaginella moellendorffii]
Length = 522
Score = 55.5 bits (132), Expect = 8e-06
Identities = 28/82 (34%), Positives = 48/82 (58%)
Frame = +1
Query: 16 RNGMYQEALQLYFQIICEDIESDPCVLSWAIDACAGIKGLKEGREIHGRAIKAGYVRYEE 195
++G+ +EAL Y I E +E + L+ + AC+ K LK G+ IH RA+ G+ + ++
Sbjct: 278 QHGLVREALGAYHSIDLEGLEPNHRTLTTVLGACSSSKDLKTGKMIHSRAVCCGFDKEDQ 337
Query: 196 ALVVSLVKMYREFGLVDEVHKV 261
AL V++V Y + G V + +V
Sbjct: 338 ALQVAVVNFYGKCGAVADARRV 359