BLASTX nr result
ID: Cocculus22_contig00030600
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus22_contig00030600 (273 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_006576371.1| NADH dehydrogenase subunit 3 (mitochondrion)... 60 4e-07 ref|NP_739612.1| NADH dehydrogenase subunit 3 [Thrips imaginis] ... 57 3e-06 >ref|YP_006576371.1| NADH dehydrogenase subunit 3 (mitochondrion) [Frankliniella occidentalis] gi|356461549|gb|AET08373.1| NADH dehydrogenase subunit 3 (mitochondrion) [Frankliniella occidentalis] Length = 115 Score = 59.7 bits (143), Expect = 4e-07 Identities = 28/55 (50%), Positives = 36/55 (65%) Frame = +1 Query: 109 ILFTSFTIALLLXXXXXXXXXXXXXXXEKWRPFECGFNFFNSARIPFSIRFFLIA 273 ++ T FT++++L EK PFECGFNFFNSA++PFSIRFFLIA Sbjct: 5 LVLTMFTLSMILIMIMSTFSKKSKNWREKMIPFECGFNFFNSAQMPFSIRFFLIA 59 >ref|NP_739612.1| NADH dehydrogenase subunit 3 [Thrips imaginis] gi|24762256|gb|AAK55289.2|AF335993_2 NADH dehydrogenase subunit 3 [Thrips imaginis] Length = 116 Score = 56.6 bits (135), Expect = 3e-06 Identities = 27/54 (50%), Positives = 33/54 (61%) Frame = +1 Query: 112 LFTSFTIALLLXXXXXXXXXXXXXXXEKWRPFECGFNFFNSARIPFSIRFFLIA 273 + TS T+ +L EK PFECGFNFFNSAR+PFS++FFLIA Sbjct: 7 ILTSLTVTFILMSMTTMISKKSQKSREKQIPFECGFNFFNSARMPFSMQFFLIA 60