BLASTX nr result

ID: Cocculus22_contig00030566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00030566
         (430 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004251337.1| PREDICTED: zinc finger CCCH domain-containin...    52   6e-08
gb|EMT32909.1| Zinc finger CCCH domain-containing protein 44 [Ae...    51   3e-06
ref|XP_006582460.1| PREDICTED: zinc finger CCCH domain-containin...    57   3e-06
ref|XP_003576761.1| PREDICTED: uncharacterized protein LOC100835...    51   4e-06

>ref|XP_004251337.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
           [Solanum lycopersicum]
          Length = 1397

 Score = 51.6 bits (122), Expect(2) = 6e-08
 Identities = 23/43 (53%), Positives = 30/43 (69%)
 Frame = +3

Query: 33  GTFF*LQLHKWSTTSHFPANLMIWKTKENQEVSITLVDALNGK 161
           G F  +QL KWS T +FPA+L IW++ + QE SI L DAL G+
Sbjct: 871 GPFSLVQLRKWSNTGYFPADLKIWRSSDKQEESILLTDALAGR 913



 Score = 30.8 bits (68), Expect(2) = 6e-08
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +1

Query: 1   WHYKDHTGKTQGPFS 45
           WHYKD + K QGPFS
Sbjct: 860 WHYKDPSSKIQGPFS 874


>gb|EMT32909.1| Zinc finger CCCH domain-containing protein 44 [Aegilops tauschii]
          Length = 1804

 Score = 51.2 bits (121), Expect(2) = 3e-06
 Identities = 24/43 (55%), Positives = 30/43 (69%)
 Frame = +3

Query: 33   GTFF*LQLHKWSTTSHFPANLMIWKTKENQEVSITLVDALNGK 161
            G F  +QL KW+++ +FP NL IWK+ E QE SI L DAL GK
Sbjct: 1249 GPFSIVQLRKWNSSGYFPHNLKIWKSNEKQEDSILLPDALAGK 1291



 Score = 25.4 bits (54), Expect(2) = 3e-06
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 1    WHYKDHTGKTQGPFS 45
            W Y D + K QGPFS
Sbjct: 1238 WQYMDPSNKIQGPFS 1252


>ref|XP_006582460.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
            [Glycine max]
          Length = 1730

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/53 (50%), Positives = 34/53 (64%)
 Frame = +3

Query: 9    QRPYWENSGTFF*LQLHKWSTTSHFPANLMIWKTKENQEVSITLVDALNGKLA 167
            Q P  +  G F  +QLHKWS T +FPA+L IW+T E Q+ SI L DAL G  +
Sbjct: 1182 QDPSGKVQGPFSMVQLHKWSNTGYFPADLRIWRTTEKQDDSILLTDALAGNFS 1234


>ref|XP_003576761.1| PREDICTED: uncharacterized protein LOC100835763 [Brachypodium
            distachyon]
          Length = 1800

 Score = 50.8 bits (120), Expect(2) = 4e-06
 Identities = 23/43 (53%), Positives = 29/43 (67%)
 Frame = +3

Query: 33   GTFF*LQLHKWSTTSHFPANLMIWKTKENQEVSITLVDALNGK 161
            G F  +QL KW+ + +FP NL IWK+ E Q+ SI L DAL GK
Sbjct: 1224 GPFSIVQLRKWNNSGYFPPNLKIWKSNEKQDDSILLADALAGK 1266



 Score = 25.4 bits (54), Expect(2) = 4e-06
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 1    WHYKDHTGKTQGPFS 45
            W Y D + K QGPFS
Sbjct: 1213 WQYMDPSNKIQGPFS 1227


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