BLASTX nr result
ID: Cocculus22_contig00030482
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00030482
(301 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI24510.3| unnamed protein product [Vitis vinifera] 168 6e-40
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec... 168 6e-40
ref|XP_004169296.1| PREDICTED: cleavage and polyadenylation spec... 168 8e-40
ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation spec... 168 8e-40
ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation spec... 167 1e-39
ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation spec... 167 1e-39
ref|XP_004514987.1| PREDICTED: cleavage and polyadenylation spec... 166 2e-39
ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citr... 166 3e-39
ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citr... 166 3e-39
ref|XP_004234158.1| PREDICTED: cleavage and polyadenylation spec... 166 4e-39
ref|XP_007152397.1| hypothetical protein PHAVU_004G126600g [Phas... 165 5e-39
ref|XP_007038475.1| Cleavage and polyadenylation specificity fac... 165 7e-39
ref|XP_007038474.1| Cleavage and polyadenylation specificity fac... 165 7e-39
ref|XP_007038473.1| Cleavage and polyadenylation specificity fac... 165 7e-39
ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec... 165 7e-39
ref|XP_006282172.1| hypothetical protein CARUB_v10028433mg [Caps... 162 5e-38
ref|XP_006401932.1| hypothetical protein EUTSA_v10012441mg [Eutr... 162 6e-38
ref|XP_007220310.1| hypothetical protein PRUPE_ppa000211mg [Prun... 162 6e-38
ref|XP_006587381.1| PREDICTED: cleavage and polyadenylation spec... 161 8e-38
ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation spec... 161 8e-38
>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
Length = 1448
Score = 168 bits (426), Expect = 6e-40
Identities = 83/100 (83%), Positives = 93/100 (93%)
Frame = -1
Query: 301 EEFEVRILEPEKSGGPWQTRATISMQNSENALTVRMVTLHNSMTNENETLLAIGTAYVQG 122
+EFEVR+LEPEKSG PWQTRATI MQ+SENALTVR+VTL N+ T ENETLLAIGTAYVQG
Sbjct: 1078 DEFEVRVLEPEKSGAPWQTRATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAYVQG 1137
Query: 121 EDVAARGRVLLYSIGRNADNSTNLVSEVYSKELKGAISAL 2
EDVAARGRVLL+S+G+N DNS NLVSE+YSKELKGAISA+
Sbjct: 1138 EDVAARGRVLLFSVGKNTDNSQNLVSEIYSKELKGAISAV 1177
>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Vitis vinifera]
Length = 1442
Score = 168 bits (426), Expect = 6e-40
Identities = 83/100 (83%), Positives = 93/100 (93%)
Frame = -1
Query: 301 EEFEVRILEPEKSGGPWQTRATISMQNSENALTVRMVTLHNSMTNENETLLAIGTAYVQG 122
+EFEVR+LEPEKSG PWQTRATI MQ+SENALTVR+VTL N+ T ENETLLAIGTAYVQG
Sbjct: 1072 DEFEVRVLEPEKSGAPWQTRATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAYVQG 1131
Query: 121 EDVAARGRVLLYSIGRNADNSTNLVSEVYSKELKGAISAL 2
EDVAARGRVLL+S+G+N DNS NLVSE+YSKELKGAISA+
Sbjct: 1132 EDVAARGRVLLFSVGKNTDNSQNLVSEIYSKELKGAISAV 1171
>ref|XP_004169296.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like, partial [Cucumis sativus]
Length = 741
Score = 168 bits (425), Expect = 8e-40
Identities = 83/100 (83%), Positives = 94/100 (94%)
Frame = -1
Query: 301 EEFEVRILEPEKSGGPWQTRATISMQNSENALTVRMVTLHNSMTNENETLLAIGTAYVQG 122
EEFE+RILEPEKSGGPWQTRATI+M +SENALT+R+VTL N+ T ENETLLA+GTAYVQG
Sbjct: 372 EEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQG 431
Query: 121 EDVAARGRVLLYSIGRNADNSTNLVSEVYSKELKGAISAL 2
EDVAARGRVLL+S+G++ADNS LVSEVYSKELKGAISAL
Sbjct: 432 EDVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISAL 471
>ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Cucumis sativus]
Length = 1504
Score = 168 bits (425), Expect = 8e-40
Identities = 83/100 (83%), Positives = 94/100 (94%)
Frame = -1
Query: 301 EEFEVRILEPEKSGGPWQTRATISMQNSENALTVRMVTLHNSMTNENETLLAIGTAYVQG 122
EEFE+RILEPEKSGGPWQTRATI+M +SENALT+R+VTL N+ T ENETLLA+GTAYVQG
Sbjct: 1135 EEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQG 1194
Query: 121 EDVAARGRVLLYSIGRNADNSTNLVSEVYSKELKGAISAL 2
EDVAARGRVLL+S+G++ADNS LVSEVYSKELKGAISAL
Sbjct: 1195 EDVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISAL 1234
>ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X2 [Citrus sinensis]
Length = 1457
Score = 167 bits (423), Expect = 1e-39
Identities = 84/100 (84%), Positives = 93/100 (93%)
Frame = -1
Query: 301 EEFEVRILEPEKSGGPWQTRATISMQNSENALTVRMVTLHNSMTNENETLLAIGTAYVQG 122
EE+EVRILEP+++GGPWQTRATI MQ+SENALTVR+VTL N+ T ENETLLAIGTAYVQG
Sbjct: 1087 EEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAYVQG 1146
Query: 121 EDVAARGRVLLYSIGRNADNSTNLVSEVYSKELKGAISAL 2
EDVAARGRVLL+S GRNADN NLV+EVYSKELKGAISAL
Sbjct: 1147 EDVAARGRVLLFSTGRNADNPQNLVTEVYSKELKGAISAL 1186
>ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X1 [Citrus sinensis]
Length = 1458
Score = 167 bits (423), Expect = 1e-39
Identities = 84/100 (84%), Positives = 93/100 (93%)
Frame = -1
Query: 301 EEFEVRILEPEKSGGPWQTRATISMQNSENALTVRMVTLHNSMTNENETLLAIGTAYVQG 122
EE+EVRILEP+++GGPWQTRATI MQ+SENALTVR+VTL N+ T ENETLLAIGTAYVQG
Sbjct: 1088 EEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAYVQG 1147
Query: 121 EDVAARGRVLLYSIGRNADNSTNLVSEVYSKELKGAISAL 2
EDVAARGRVLL+S GRNADN NLV+EVYSKELKGAISAL
Sbjct: 1148 EDVAARGRVLLFSTGRNADNPQNLVTEVYSKELKGAISAL 1187
>ref|XP_004514987.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Cicer arietinum]
Length = 1447
Score = 166 bits (421), Expect = 2e-39
Identities = 83/100 (83%), Positives = 92/100 (92%)
Frame = -1
Query: 301 EEFEVRILEPEKSGGPWQTRATISMQNSENALTVRMVTLHNSMTNENETLLAIGTAYVQG 122
EEFEVRI+EPEKSGGPWQ +ATI MQ+SENALTVRMVTL N+ + ENETLLAIGTAYVQG
Sbjct: 1078 EEFEVRIMEPEKSGGPWQLKATIPMQSSENALTVRMVTLMNTSSKENETLLAIGTAYVQG 1137
Query: 121 EDVAARGRVLLYSIGRNADNSTNLVSEVYSKELKGAISAL 2
EDVAARGR+LL+S+G+N DN NLVSEVYSKELKGAISAL
Sbjct: 1138 EDVAARGRILLFSLGKNTDNPQNLVSEVYSKELKGAISAL 1177
>ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
gi|557523633|gb|ESR35000.1| hypothetical protein
CICLE_v10004147mg [Citrus clementina]
Length = 1457
Score = 166 bits (420), Expect = 3e-39
Identities = 83/100 (83%), Positives = 93/100 (93%)
Frame = -1
Query: 301 EEFEVRILEPEKSGGPWQTRATISMQNSENALTVRMVTLHNSMTNENETLLAIGTAYVQG 122
EE+EVRILEP+++GGPWQTRATI MQ+SENALTVR+VTL N+ T EN+TLLAIGTAYVQG
Sbjct: 1087 EEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTLFNTTTKENDTLLAIGTAYVQG 1146
Query: 121 EDVAARGRVLLYSIGRNADNSTNLVSEVYSKELKGAISAL 2
EDVAARGRVLL+S GRNADN NLV+EVYSKELKGAISAL
Sbjct: 1147 EDVAARGRVLLFSTGRNADNPQNLVTEVYSKELKGAISAL 1186
>ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
gi|557523632|gb|ESR34999.1| hypothetical protein
CICLE_v10004147mg [Citrus clementina]
Length = 1458
Score = 166 bits (420), Expect = 3e-39
Identities = 83/100 (83%), Positives = 93/100 (93%)
Frame = -1
Query: 301 EEFEVRILEPEKSGGPWQTRATISMQNSENALTVRMVTLHNSMTNENETLLAIGTAYVQG 122
EE+EVRILEP+++GGPWQTRATI MQ+SENALTVR+VTL N+ T EN+TLLAIGTAYVQG
Sbjct: 1088 EEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTLFNTTTKENDTLLAIGTAYVQG 1147
Query: 121 EDVAARGRVLLYSIGRNADNSTNLVSEVYSKELKGAISAL 2
EDVAARGRVLL+S GRNADN NLV+EVYSKELKGAISAL
Sbjct: 1148 EDVAARGRVLLFSTGRNADNPQNLVTEVYSKELKGAISAL 1187
>ref|XP_004234158.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Solanum lycopersicum]
Length = 1447
Score = 166 bits (419), Expect = 4e-39
Identities = 85/100 (85%), Positives = 91/100 (91%)
Frame = -1
Query: 301 EEFEVRILEPEKSGGPWQTRATISMQNSENALTVRMVTLHNSMTNENETLLAIGTAYVQG 122
EEFEVRILEPEKSGGPW+TRA+I MQ+SENALTVRMVTL N+ T ENETLLA+GTAYVQG
Sbjct: 1079 EEFEVRILEPEKSGGPWKTRASIPMQSSENALTVRMVTLFNTKTKENETLLAVGTAYVQG 1138
Query: 121 EDVAARGRVLLYSIGRNADNSTNLVSEVYSKELKGAISAL 2
EDVAARGRVLL+SI R ADNS LVSEVYSKELKGAI AL
Sbjct: 1139 EDVAARGRVLLFSIDRTADNSRTLVSEVYSKELKGAIPAL 1178
>ref|XP_007152397.1| hypothetical protein PHAVU_004G126600g [Phaseolus vulgaris]
gi|561025706|gb|ESW24391.1| hypothetical protein
PHAVU_004G126600g [Phaseolus vulgaris]
Length = 1445
Score = 165 bits (418), Expect = 5e-39
Identities = 82/100 (82%), Positives = 93/100 (93%)
Frame = -1
Query: 301 EEFEVRILEPEKSGGPWQTRATISMQNSENALTVRMVTLHNSMTNENETLLAIGTAYVQG 122
+EFEVRI+EPEKSGGPWQT+ATI MQ+SENALTVRMVTL N+ + ENETLLAIGTAYVQG
Sbjct: 1076 DEFEVRIMEPEKSGGPWQTKATIPMQSSENALTVRMVTLLNTTSKENETLLAIGTAYVQG 1135
Query: 121 EDVAARGRVLLYSIGRNADNSTNLVSEVYSKELKGAISAL 2
EDVAARGR+LL+S+G+N DN +LVSEVYSKELKGAISAL
Sbjct: 1136 EDVAARGRILLFSLGKNTDNPQSLVSEVYSKELKGAISAL 1175
>ref|XP_007038475.1| Cleavage and polyadenylation specificity factor subunit 1 isoform 3
[Theobroma cacao] gi|508775720|gb|EOY22976.1| Cleavage
and polyadenylation specificity factor subunit 1 isoform
3 [Theobroma cacao]
Length = 1195
Score = 165 bits (417), Expect = 7e-39
Identities = 83/100 (83%), Positives = 92/100 (92%)
Frame = -1
Query: 301 EEFEVRILEPEKSGGPWQTRATISMQNSENALTVRMVTLHNSMTNENETLLAIGTAYVQG 122
+EFEVRILEPEKSGGPW+T+ATI MQ+SENALTVR+VTL N+ T ENE+LLAIGTAY+QG
Sbjct: 887 DEFEVRILEPEKSGGPWETKATIPMQSSENALTVRVVTLFNTTTKENESLLAIGTAYIQG 946
Query: 121 EDVAARGRVLLYSIGRNADNSTNLVSEVYSKELKGAISAL 2
EDVAARGRV+L SIGRN DN NLVSEVYSKELKGAISAL
Sbjct: 947 EDVAARGRVILCSIGRNTDNLQNLVSEVYSKELKGAISAL 986
>ref|XP_007038474.1| Cleavage and polyadenylation specificity factor 160 isoform 2
[Theobroma cacao] gi|508775719|gb|EOY22975.1| Cleavage
and polyadenylation specificity factor 160 isoform 2
[Theobroma cacao]
Length = 1257
Score = 165 bits (417), Expect = 7e-39
Identities = 83/100 (83%), Positives = 92/100 (92%)
Frame = -1
Query: 301 EEFEVRILEPEKSGGPWQTRATISMQNSENALTVRMVTLHNSMTNENETLLAIGTAYVQG 122
+EFEVRILEPEKSGGPW+T+ATI MQ+SENALTVR+VTL N+ T ENE+LLAIGTAY+QG
Sbjct: 887 DEFEVRILEPEKSGGPWETKATIPMQSSENALTVRVVTLFNTTTKENESLLAIGTAYIQG 946
Query: 121 EDVAARGRVLLYSIGRNADNSTNLVSEVYSKELKGAISAL 2
EDVAARGRV+L SIGRN DN NLVSEVYSKELKGAISAL
Sbjct: 947 EDVAARGRVILCSIGRNTDNLQNLVSEVYSKELKGAISAL 986
>ref|XP_007038473.1| Cleavage and polyadenylation specificity factor 160 isoform 1
[Theobroma cacao] gi|508775718|gb|EOY22974.1| Cleavage
and polyadenylation specificity factor 160 isoform 1
[Theobroma cacao]
Length = 1457
Score = 165 bits (417), Expect = 7e-39
Identities = 83/100 (83%), Positives = 92/100 (92%)
Frame = -1
Query: 301 EEFEVRILEPEKSGGPWQTRATISMQNSENALTVRMVTLHNSMTNENETLLAIGTAYVQG 122
+EFEVRILEPEKSGGPW+T+ATI MQ+SENALTVR+VTL N+ T ENE+LLAIGTAY+QG
Sbjct: 1087 DEFEVRILEPEKSGGPWETKATIPMQSSENALTVRVVTLFNTTTKENESLLAIGTAYIQG 1146
Query: 121 EDVAARGRVLLYSIGRNADNSTNLVSEVYSKELKGAISAL 2
EDVAARGRV+L SIGRN DN NLVSEVYSKELKGAISAL
Sbjct: 1147 EDVAARGRVILCSIGRNTDNLQNLVSEVYSKELKGAISAL 1186
>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Glycine max]
Length = 1447
Score = 165 bits (417), Expect = 7e-39
Identities = 82/100 (82%), Positives = 92/100 (92%)
Frame = -1
Query: 301 EEFEVRILEPEKSGGPWQTRATISMQNSENALTVRMVTLHNSMTNENETLLAIGTAYVQG 122
+EFEVRI+EPEKSGGPWQT+ATI MQ+SENALTVRMVTL N+ + ENETLLAIGTAYVQG
Sbjct: 1078 DEFEVRIMEPEKSGGPWQTKATIPMQSSENALTVRMVTLVNTTSKENETLLAIGTAYVQG 1137
Query: 121 EDVAARGRVLLYSIGRNADNSTNLVSEVYSKELKGAISAL 2
EDVAARGR+LL+S+G+N DN LVSEVYSKELKGAISAL
Sbjct: 1138 EDVAARGRILLFSLGKNTDNPQTLVSEVYSKELKGAISAL 1177
>ref|XP_006282172.1| hypothetical protein CARUB_v10028433mg [Capsella rubella]
gi|482550876|gb|EOA15070.1| hypothetical protein
CARUB_v10028433mg [Capsella rubella]
Length = 1447
Score = 162 bits (410), Expect = 5e-38
Identities = 79/100 (79%), Positives = 93/100 (93%)
Frame = -1
Query: 301 EEFEVRILEPEKSGGPWQTRATISMQNSENALTVRMVTLHNSMTNENETLLAIGTAYVQG 122
EEFE+RILEPE+SGGPW+T+ATI MQ+SE+ALTVR+VTL N+ T ENETLLA+GTAYVQG
Sbjct: 1086 EEFEIRILEPERSGGPWETKATIPMQSSEHALTVRVVTLLNASTGENETLLAVGTAYVQG 1145
Query: 121 EDVAARGRVLLYSIGRNADNSTNLVSEVYSKELKGAISAL 2
EDVAARGRVLL+S G+N DNS N+V+EVYSKELKGAISA+
Sbjct: 1146 EDVAARGRVLLFSFGKNGDNSPNVVTEVYSKELKGAISAV 1185
>ref|XP_006401932.1| hypothetical protein EUTSA_v10012441mg [Eutrema salsugineum]
gi|557103022|gb|ESQ43385.1| hypothetical protein
EUTSA_v10012441mg [Eutrema salsugineum]
Length = 1445
Score = 162 bits (409), Expect = 6e-38
Identities = 79/100 (79%), Positives = 93/100 (93%)
Frame = -1
Query: 301 EEFEVRILEPEKSGGPWQTRATISMQNSENALTVRMVTLHNSMTNENETLLAIGTAYVQG 122
EEFE++ILEPE+SGGPW+T+ATI MQ SE+ALTVR+VTL N+ T+ENETLLA+GTAYVQG
Sbjct: 1084 EEFEIQILEPERSGGPWETKATIPMQTSEHALTVRVVTLLNASTSENETLLAVGTAYVQG 1143
Query: 121 EDVAARGRVLLYSIGRNADNSTNLVSEVYSKELKGAISAL 2
EDVAARGRVLL+S GRN DNS NLV+EVYSKELKG+ISA+
Sbjct: 1144 EDVAARGRVLLFSFGRNGDNSQNLVTEVYSKELKGSISAV 1183
>ref|XP_007220310.1| hypothetical protein PRUPE_ppa000211mg [Prunus persica]
gi|462416772|gb|EMJ21509.1| hypothetical protein
PRUPE_ppa000211mg [Prunus persica]
Length = 1459
Score = 162 bits (409), Expect = 6e-38
Identities = 80/100 (80%), Positives = 91/100 (91%)
Frame = -1
Query: 301 EEFEVRILEPEKSGGPWQTRATISMQNSENALTVRMVTLHNSMTNENETLLAIGTAYVQG 122
+EFE+RI+EP+KSGGPWQT+ATI MQ SENALTVR+VTL N+ T ENETLLAIGTAYVQG
Sbjct: 1089 DEFEIRIMEPDKSGGPWQTKATIPMQTSENALTVRVVTLFNTTTKENETLLAIGTAYVQG 1148
Query: 121 EDVAARGRVLLYSIGRNADNSTNLVSEVYSKELKGAISAL 2
EDVA RGRVLL+S G++ADN+ LVSEVYSKELKGAISAL
Sbjct: 1149 EDVAGRGRVLLFSAGKSADNTQTLVSEVYSKELKGAISAL 1188
>ref|XP_006587381.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X2 [Glycine max]
Length = 1217
Score = 161 bits (408), Expect = 8e-38
Identities = 81/100 (81%), Positives = 91/100 (91%)
Frame = -1
Query: 301 EEFEVRILEPEKSGGPWQTRATISMQNSENALTVRMVTLHNSMTNENETLLAIGTAYVQG 122
+EFEVRI+EPEKSGGPWQT+ATI MQ+SENALTVRMVTL N+ + ENETLLAIGTAYVQG
Sbjct: 848 DEFEVRIMEPEKSGGPWQTKATIPMQSSENALTVRMVTLLNTTSKENETLLAIGTAYVQG 907
Query: 121 EDVAARGRVLLYSIGRNADNSTNLVSEVYSKELKGAISAL 2
EDVAARGR+LL+S+G+ DN LVSEVYSKELKGAISAL
Sbjct: 908 EDVAARGRILLFSLGKITDNPQTLVSEVYSKELKGAISAL 947
>ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X1 [Glycine max]
Length = 1449
Score = 161 bits (408), Expect = 8e-38
Identities = 81/100 (81%), Positives = 91/100 (91%)
Frame = -1
Query: 301 EEFEVRILEPEKSGGPWQTRATISMQNSENALTVRMVTLHNSMTNENETLLAIGTAYVQG 122
+EFEVRI+EPEKSGGPWQT+ATI MQ+SENALTVRMVTL N+ + ENETLLAIGTAYVQG
Sbjct: 1080 DEFEVRIMEPEKSGGPWQTKATIPMQSSENALTVRMVTLLNTTSKENETLLAIGTAYVQG 1139
Query: 121 EDVAARGRVLLYSIGRNADNSTNLVSEVYSKELKGAISAL 2
EDVAARGR+LL+S+G+ DN LVSEVYSKELKGAISAL
Sbjct: 1140 EDVAARGRILLFSLGKITDNPQTLVSEVYSKELKGAISAL 1179