BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00030478
         (396 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137888.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containi...    68   2e-09
ref|XP_007157299.1| hypothetical protein PHAVU_002G058400g [Phas...    66   6e-09
ref|XP_002870791.1| pentatricopeptide repeat-containing protein ...    63   4e-08
gb|EYU26974.1| hypothetical protein MIMGU_mgv1a024161mg [Mimulus...    62   1e-07
ref|NP_198751.1| pentatricopeptide repeat-containing protein [Ar...    61   1e-07
ref|XP_006285062.1| hypothetical protein CARUB_v10006375mg [Caps...    61   1e-07
ref|XP_006307085.1| hypothetical protein CARUB_v10008671mg [Caps...    55   3e-07
gb|EMT14400.1| hypothetical protein F775_09464 [Aegilops tauschii]     60   3e-07
ref|XP_004505733.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07
ref|XP_004502949.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07
gb|EMS45498.1| hypothetical protein TRIUR3_12201 [Triticum urartu]     59   5e-07
ref|XP_002438098.1| hypothetical protein SORBIDRAFT_10g007970 [S...    52   6e-07
ref|XP_004978002.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
gb|EYU24377.1| hypothetical protein MIMGU_mgv1a020160mg [Mimulus...    58   1e-06
ref|XP_006471568.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
ref|XP_007143106.1| hypothetical protein PHAVU_007G044100g [Phas...    58   1e-06

>ref|XP_004137888.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Cucumis sativus]
           gi|449521725|ref|XP_004167880.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g15300-like [Cucumis sativus]
          Length = 521

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/50 (74%), Positives = 40/50 (80%)
 Frame = -3

Query: 394 FRKISELETPTDGDCVLLSNIYAELGRWVDVERLRNEMIDLGVCKKPGSS 245
           FRK++ELE   DGD VLLSNIYAE  RW DVERLR EMI+ GVCKK GSS
Sbjct: 470 FRKLAELEPGKDGDYVLLSNIYAEEERWDDVERLRKEMINYGVCKKAGSS 519


>ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 636

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 34/55 (61%), Positives = 42/55 (76%)
 Frame = -3

Query: 394 FRKISELETPTDGDCVLLSNIYAELGRWVDVERLRNEMIDLGVCKKPGSSLIEVR 230
           F+++ ++E   DGD VLLSNIYAE  RW DVER+R+EMI  GV KKPGSS I +R
Sbjct: 582 FQQLGKMEPLRDGDYVLLSNIYAEAQRWNDVERVRSEMIGSGVPKKPGSSHIGIR 636


>ref|XP_007157299.1| hypothetical protein PHAVU_002G058400g [Phaseolus vulgaris]
           gi|561030714|gb|ESW29293.1| hypothetical protein
           PHAVU_002G058400g [Phaseolus vulgaris]
          Length = 536

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 34/60 (56%), Positives = 45/60 (75%)
 Frame = -3

Query: 394 FRKISELETPTDGDCVLLSNIYAELGRWVDVERLRNEMIDLGVCKKPGSSLIEVR*SKTY 215
           F+++ +L++ TDGD VLLSNIYAE  RW +VER+R+EMIDL V KK G S I++  S  Y
Sbjct: 475 FQQLVKLKSLTDGDYVLLSNIYAEAERWDEVERVRSEMIDLHVSKKVGHSQIDMTESPQY 534


>ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297316627|gb|EFH47050.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 674

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 30/53 (56%), Positives = 40/53 (75%)
 Frame = -3

Query: 388 KISELETPTDGDCVLLSNIYAELGRWVDVERLRNEMIDLGVCKKPGSSLIEVR 230
           K+ ELE    G+ VLL+NIYA LGRW D+E++RN M ++G+ KKPG S IE+R
Sbjct: 618 KLFELEPENTGNYVLLANIYAALGRWKDMEKVRNMMENVGLRKKPGHSTIEIR 670


>gb|EYU26974.1| hypothetical protein MIMGU_mgv1a024161mg [Mimulus guttatus]
          Length = 591

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/52 (59%), Positives = 39/52 (75%)
 Frame = -3

Query: 388 KISELETPTDGDCVLLSNIYAELGRWVDVERLRNEMIDLGVCKKPGSSLIEV 233
           K+ ELET T G+ VLLSNIYA + +W DV+R+R  M + GV K PGSSL+EV
Sbjct: 413 KLLELETETSGNYVLLSNIYACMNKWEDVKRVRELMKEKGVDKTPGSSLVEV 464


>ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g39350 gi|10177683|dbj|BAB11009.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|332007040|gb|AED94423.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 677

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 29/53 (54%), Positives = 40/53 (75%)
 Frame = -3

Query: 388 KISELETPTDGDCVLLSNIYAELGRWVDVERLRNEMIDLGVCKKPGSSLIEVR 230
           K+ ELE    G+ VLL+NIYA LGRW D+E++R+ M ++G+ KKPG S IE+R
Sbjct: 618 KLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIR 670


>ref|XP_006285062.1| hypothetical protein CARUB_v10006375mg [Capsella rubella]
           gi|482553767|gb|EOA17960.1| hypothetical protein
           CARUB_v10006375mg [Capsella rubella]
          Length = 673

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/53 (52%), Positives = 39/53 (73%)
 Frame = -3

Query: 388 KISELETPTDGDCVLLSNIYAELGRWVDVERLRNEMIDLGVCKKPGSSLIEVR 230
           K+ ELE    G+ VLL+N+Y  LGRW D+E++RN M D+G+ KKPG S +E+R
Sbjct: 617 KLFELEPENTGNYVLLANMYGALGRWKDMEKVRNMMEDVGLRKKPGHSTVEMR 669


>ref|XP_006307085.1| hypothetical protein CARUB_v10008671mg [Capsella rubella]
           gi|482575796|gb|EOA39983.1| hypothetical protein
           CARUB_v10008671mg [Capsella rubella]
          Length = 585

 Score = 55.1 bits (131), Expect(2) = 3e-07
 Identities = 28/54 (51%), Positives = 35/54 (64%)
 Frame = -3

Query: 391 RKISELETPTDGDCVLLSNIYAELGRWVDVERLRNEMIDLGVCKKPGSSLIEVR 230
           RK+ E+    DGD VLLSN+YA  GRW DV R+R++M    V K PG S IE +
Sbjct: 403 RKVMEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMETKQVKKIPGLSYIEAK 456



 Score = 25.0 bits (53), Expect(2) = 3e-07
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = -2

Query: 224 KNILSRFENPTKIFSPRMPLYRIINKIGS*CFELCY-----MVLNDVGSRKKEN 78
           K  + +F N  KI      +Y  I++I     E  Y     +VL+D+G  +KEN
Sbjct: 456 KGTIHKFYNSDKIHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKEN 509


>gb|EMT14400.1| hypothetical protein F775_09464 [Aegilops tauschii]
          Length = 596

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -3

Query: 388 KISELETPTDGDCVLLSNIYAELGRWVDVERLRNEMIDLGVCKKPGSSLIEVR 230
           ++ EL+    GD VLLSN+YA +GRW DV+ LR  M+  GV K PG SL+E+R
Sbjct: 418 RLVELDPGHSGDYVLLSNLYAAVGRWADVQILRKTMVTHGVRKNPGHSLVEIR 470


>ref|XP_004505733.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Cicer arietinum]
          Length = 544

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/54 (57%), Positives = 40/54 (74%)
 Frame = -3

Query: 394 FRKISELETPTDGDCVLLSNIYAELGRWVDVERLRNEMIDLGVCKKPGSSLIEV 233
           F+++++ E  T GD VLLSNIYAE GRW +VERLRNEM  L V K+ G S I++
Sbjct: 484 FQQLAKFEQLTIGDYVLLSNIYAEAGRWDEVERLRNEMDYLNVPKEAGYSQIDM 537


>ref|XP_004502949.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cicer arietinum]
          Length = 706

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/53 (52%), Positives = 38/53 (71%)
 Frame = -3

Query: 388 KISELETPTDGDCVLLSNIYAELGRWVDVERLRNEMIDLGVCKKPGSSLIEVR 230
           K+ E++    G  VLLSN+YAELGRW DV R+R +M  +GV K+PG S IE++
Sbjct: 585 KLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWIEIQ 637


>gb|EMS45498.1| hypothetical protein TRIUR3_12201 [Triticum urartu]
          Length = 402

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/53 (52%), Positives = 36/53 (67%)
 Frame = -3

Query: 388 KISELETPTDGDCVLLSNIYAELGRWVDVERLRNEMIDLGVCKKPGSSLIEVR 230
           ++ EL+    GD VLLSN+YA +GRW DV  LR  M+  GV K PG SL+E+R
Sbjct: 224 RLVELDPGHSGDYVLLSNLYAAVGRWADVHVLRKTMVTHGVRKNPGHSLVEIR 276


>ref|XP_002438098.1| hypothetical protein SORBIDRAFT_10g007970 [Sorghum bicolor]
           gi|241916321|gb|EER89465.1| hypothetical protein
           SORBIDRAFT_10g007970 [Sorghum bicolor]
          Length = 596

 Score = 52.0 bits (123), Expect(2) = 6e-07
 Identities = 26/52 (50%), Positives = 34/52 (65%)
 Frame = -3

Query: 388 KISELETPTDGDCVLLSNIYAELGRWVDVERLRNEMIDLGVCKKPGSSLIEV 233
           K+++L +  DGD VLLSN+YA   RWVDV R+R+ M    V K PG S  E+
Sbjct: 418 KLADLGSNVDGDYVLLSNVYASKSRWVDVGRVRDTMRSNDVKKVPGFSYTEI 469



 Score = 26.9 bits (58), Expect(2) = 6e-07
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
 Frame = -2

Query: 227 IKNILSRFENPTKIFSPRMPLYRIINKIGS*CFELCY-----MVLNDVGSRKKE 81
           I  ++ +F N  K       +YR +++IGS   EL Y      VL+D+G  +K+
Sbjct: 469 IDGVMHKFINGDKEHLRWREIYRALDEIGSKICELGYEPETSNVLHDIGEEEKQ 522


>ref|XP_004978002.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Setaria italica]
          Length = 687

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = -3

Query: 388 KISELETPTDGDCVLLSNIYAELGRWVDVERLRNEMIDLGVCKKPGSSLIEV 233
           K+ E++    G  VLLSN+YAE+G+W DV R+R  M D GV K+PG S IE+
Sbjct: 583 KLFEIDPENSGPYVLLSNMYAEMGKWTDVFRVRRSMKDRGVSKQPGCSWIEI 634


>ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 815

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/52 (53%), Positives = 37/52 (71%)
 Frame = -3

Query: 388 KISELETPTDGDCVLLSNIYAELGRWVDVERLRNEMIDLGVCKKPGSSLIEV 233
           ++ ELE       +LLSNIYA+LGRW DV R+RN ++D GV K+PG S IE+
Sbjct: 748 RLFELEPHDASSSILLSNIYADLGRWSDVTRVRNILLDHGVKKEPGCSWIEI 799


>ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -3

Query: 388 KISELETPTDGDCVLLSNIYAELGRWVDVERLRNEMIDLGVCKKPGSSLIEVR 230
           K+ E++    G  VLLSN+YAELGRW DV R+R +M   GV K+PG S IE++
Sbjct: 585 KLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWIEIQ 637


>ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Glycine max]
          Length = 591

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/53 (54%), Positives = 38/53 (71%)
 Frame = -3

Query: 391 RKISELETPTDGDCVLLSNIYAELGRWVDVERLRNEMIDLGVCKKPGSSLIEV 233
           + + ELE  T G+ VLLSN+YA +GRW DV+R+R  M D GV K PG SL+E+
Sbjct: 412 KHLIELEPETSGNYVLLSNMYASIGRWNDVKRVRMLMKDHGVDKLPGFSLVEI 464


>gb|EYU24377.1| hypothetical protein MIMGU_mgv1a020160mg [Mimulus guttatus]
          Length = 580

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/53 (54%), Positives = 36/53 (67%)
 Frame = -3

Query: 391 RKISELETPTDGDCVLLSNIYAELGRWVDVERLRNEMIDLGVCKKPGSSLIEV 233
           RK+SEL+    GD VLLSNIYA  G+W DV  +R  M +L + K PG S+IEV
Sbjct: 409 RKLSELDPKNSGDHVLLSNIYAFAGKWKDVATVRRSMAELKLVKTPGWSMIEV 461


>ref|XP_006471568.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Citrus sinensis]
          Length = 860

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
 Frame = -3

Query: 388 KISELETPTDGDCVLLSNIYAELGRWVDVERLRNEMIDLGVCKKPGSSLIEVR-*SKTYY 212
           ++ ELE+  DG   LLSNIYA  GRW DV R+R+ M   GV K+PG S ++ +  + T++
Sbjct: 682 RLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATFF 741

Query: 211 QGLRTQ-QKYSLQECLSTGLLTKLVA 137
            G RT  Q   + E L+ GL+ ++ A
Sbjct: 742 VGDRTHPQSQKIYEILA-GLVQRIKA 766


>ref|XP_007143106.1| hypothetical protein PHAVU_007G044100g [Phaseolus vulgaris]
           gi|561016296|gb|ESW15100.1| hypothetical protein
           PHAVU_007G044100g [Phaseolus vulgaris]
          Length = 510

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/53 (49%), Positives = 39/53 (73%)
 Frame = -3

Query: 391 RKISELETPTDGDCVLLSNIYAELGRWVDVERLRNEMIDLGVCKKPGSSLIEV 233
           + + ELE  T G+ VL+SN+YA +GRW DV+R+R +M D GV K PG S++++
Sbjct: 331 KHLIELEPETSGNYVLMSNMYASIGRWNDVKRVRMQMKDRGVDKLPGFSIVDI 383