BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00030472
         (509 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi...    69   7e-10
ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containi...    56   5e-06
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi...    56   5e-06

>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Vitis vinifera]
          Length = 641

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 44/96 (45%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
 Frame = +3

Query: 225 NGVRFQMTLFLLPTSRSRVLRAASTTFFISSFHDHAVQVSSQPDFRISDREVIRNSEAWI 404
           +GV  QMTL L  T  SRV    ++   I+ FH+HAV +S          EVI+N E WI
Sbjct: 27  DGVALQMTLLLFITRPSRV---RASKIAIAQFHEHAVGISRNRP------EVIQNPENWI 77

Query: 405 VKVVSTLCV-VHGLKSSTDFACLEYFSKSFNPSIVY 509
           VKV+ TLCV  H L      ACL+YFSK+  PSI +
Sbjct: 78  VKVICTLCVRTHSLD-----ACLDYFSKTLTPSIAF 108


>ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 34/79 (43%), Positives = 46/79 (58%)
 Frame = +3

Query: 273 SRVLRAASTTFFISSFHDHAVQVSSQPDFRISDREVIRNSEAWIVKVVSTLCVVHGLKSS 452
           SR  R  ++ F I+ F+  A  VS    F   DRE+IR+SEAW+VKVV TL      +S 
Sbjct: 8   SRAYRLRTSNFSIAQFYSLADSVSRARPF--CDREIIRHSEAWLVKVVCTLF----FRSH 61

Query: 453 TDFACLEYFSKSFNPSIVY 509
           +  AC  Y S++ NPSI +
Sbjct: 62  SLNACFGYLSRNLNPSIAF 80


>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 34/79 (43%), Positives = 46/79 (58%)
 Frame = +3

Query: 273 SRVLRAASTTFFISSFHDHAVQVSSQPDFRISDREVIRNSEAWIVKVVSTLCVVHGLKSS 452
           SR  R  ++ F I+ F+  A  VS    F   DRE+IR+SEAW+VKVV TL      +S 
Sbjct: 8   SRAYRLRTSNFSIAQFYSLADSVSRARPF--CDREIIRHSEAWLVKVVCTLF----FRSH 61

Query: 453 TDFACLEYFSKSFNPSIVY 509
           +  AC  Y S++ NPSI +
Sbjct: 62  SLNACFGYLSRNLNPSIAF 80