BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00030468
         (302 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer ar...   135   8e-30
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]         133   2e-29
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]         133   2e-29
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru...   133   2e-29
gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein...   131   1e-28
ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer ar...   130   2e-28
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]            130   2e-28
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain...   130   2e-28
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]...   130   2e-28
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar...   129   4e-28
ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer ar...   127   2e-27
ref|XP_006405665.1| hypothetical protein EUTSA_v10028343mg, part...   126   4e-27
ref|XP_006403349.1| hypothetical protein EUTSA_v10003417mg, part...   125   8e-27
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar...   125   8e-27
ref|XP_004489152.1| PREDICTED: genome polyprotein-like [Cicer ar...   124   1e-26
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part...   123   2e-26
ref|XP_004511013.1| PREDICTED: genome polyprotein-like [Cicer ar...   123   2e-26
ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, part...   120   3e-25
ref|XP_004512786.1| PREDICTED: genome polyprotein-like [Cicer ar...   119   3e-25
ref|XP_004490917.1| PREDICTED: genome polyprotein-like [Cicer ar...   119   3e-25

>ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1170

 Score =  135 bits (339), Expect = 8e-30
 Identities = 61/92 (66%), Positives = 74/92 (80%)
 Frame = +2

Query: 26   DAHWFTKFDLRSGFWQLGIHPDDRPKTAFCIPNAHYQWTVMPFGLKTTPSLFQQTITKIY 205
            DA  F+KFD++SGFWQLG+ P DR KTAFCIPNA YQWTV+PFGLK  PSLFQ+ +TKI+
Sbjct: 831  DAQIFSKFDMKSGFWQLGVDPKDRHKTAFCIPNAQYQWTVLPFGLKVAPSLFQKAMTKIF 890

Query: 206  SPMLSSMLIYIDDLLFFAKTEDEMQALLTQFF 301
             P+L S+LIYIDD+L F+K E   + LL QFF
Sbjct: 891  EPILDSILIYIDDVLLFSKDEKTHKQLLGQFF 922


>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1701

 Score =  133 bits (335), Expect = 2e-29
 Identities = 58/92 (63%), Positives = 76/92 (82%)
 Frame = +2

Query: 26   DAHWFTKFDLRSGFWQLGIHPDDRPKTAFCIPNAHYQWTVMPFGLKTTPSLFQQTITKIY 205
            +A  F+KFDL+SGFWQLGI P +R KTAFCIPNAH+QWTV+PFGLKT PS+FQ+++ KI+
Sbjct: 1314 NAQIFSKFDLKSGFWQLGIEPSERYKTAFCIPNAHFQWTVLPFGLKTAPSIFQKSMIKIF 1373

Query: 206  SPMLSSMLIYIDDLLFFAKTEDEMQALLTQFF 301
             P+LS+ LIYIDD+L F+ + D+   LL QF+
Sbjct: 1374 QPLLSNALIYIDDILLFSGSHDDHHRLLNQFY 1405


>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1799

 Score =  133 bits (335), Expect = 2e-29
 Identities = 58/92 (63%), Positives = 76/92 (82%)
 Frame = +2

Query: 26   DAHWFTKFDLRSGFWQLGIHPDDRPKTAFCIPNAHYQWTVMPFGLKTTPSLFQQTITKIY 205
            +A  F+KFDL+SGFWQLGI P +R KTAFCIPNAH+QWTV+PFGLKT PS+FQ+++ KI+
Sbjct: 1412 NAQIFSKFDLKSGFWQLGIEPSERYKTAFCIPNAHFQWTVLPFGLKTAPSIFQKSMIKIF 1471

Query: 206  SPMLSSMLIYIDDLLFFAKTEDEMQALLTQFF 301
             P+LS+ LIYIDD+L F+ + D+   LL QF+
Sbjct: 1472 QPLLSNALIYIDDILLFSGSHDDHHRLLNQFY 1503


>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
            gi|565672276|gb|AHC13194.1| polyprotein [Citrus
            endogenous pararetrovirus]
          Length = 1812

 Score =  133 bits (335), Expect = 2e-29
 Identities = 58/92 (63%), Positives = 76/92 (82%)
 Frame = +2

Query: 26   DAHWFTKFDLRSGFWQLGIHPDDRPKTAFCIPNAHYQWTVMPFGLKTTPSLFQQTITKIY 205
            +A  F+KFDL+SGFWQLGI P +R KTAFCIPNAH+QWTV+PFGLKT PS+FQ+++ KI+
Sbjct: 1425 NAQIFSKFDLKSGFWQLGIEPSERYKTAFCIPNAHFQWTVLPFGLKTAPSIFQKSMIKIF 1484

Query: 206  SPMLSSMLIYIDDLLFFAKTEDEMQALLTQFF 301
             P+LS+ LIYIDD+L F+ + D+   LL QF+
Sbjct: 1485 QPLLSNALIYIDDILLFSGSHDDHHRLLNQFY 1516


>gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein clearing virus]
          Length = 758

 Score =  131 bits (329), Expect = 1e-28
 Identities = 57/91 (62%), Positives = 75/91 (82%)
 Frame = +2

Query: 26  DAHWFTKFDLRSGFWQLGIHPDDRPKTAFCIPNAHYQWTVMPFGLKTTPSLFQQTITKIY 205
           +AH F+KFDL++GFWQLGIHPD+RPKT FCI + HYQW VMPFGLKT PSLFQ+ + KI+
Sbjct: 79  NAHVFSKFDLKAGFWQLGIHPDERPKTGFCITDHHYQWKVMPFGLKTAPSLFQKAMIKIF 138

Query: 206 SPMLSSMLIYIDDLLFFAKTEDEMQALLTQF 298
           SP+L++ LIYIDD+L F+ +++    +L QF
Sbjct: 139 SPILTNALIYIDDILLFSHSQEAHIQILYQF 169


>ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 894

 Score =  130 bits (327), Expect = 2e-28
 Identities = 58/91 (63%), Positives = 74/91 (81%)
 Frame = +2

Query: 26  DAHWFTKFDLRSGFWQLGIHPDDRPKTAFCIPNAHYQWTVMPFGLKTTPSLFQQTITKIY 205
           DA  ++KFD++SGFWQLGI P+DR KTAFCIPNA YQWTV+PFGLK  PSLFQ+ +T+I+
Sbjct: 636 DAQVYSKFDMKSGFWQLGIDPNDRYKTAFCIPNAQYQWTVLPFGLKVAPSLFQKAMTRIF 695

Query: 206 SPMLSSMLIYIDDLLFFAKTEDEMQALLTQF 298
            P++ S+LIYIDD+L F+K E   + LL QF
Sbjct: 696 EPIIDSILIYIDDVLLFSKDEKAHKQLLGQF 726


>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
          Length = 1886

 Score =  130 bits (326), Expect = 2e-28
 Identities = 57/90 (63%), Positives = 73/90 (81%)
 Frame = +2

Query: 29   AHWFTKFDLRSGFWQLGIHPDDRPKTAFCIPNAHYQWTVMPFGLKTTPSLFQQTITKIYS 208
            A  F+KFDL+SGFWQLGIHP++RPKT FCIP+ H+QW VMPFGLKT PSLFQ+ + KI+ 
Sbjct: 1473 AKLFSKFDLKSGFWQLGIHPNERPKTGFCIPDRHFQWKVMPFGLKTAPSLFQKAMIKIFQ 1532

Query: 209  PMLSSMLIYIDDLLFFAKTEDEMQALLTQF 298
            P+L S L+YIDD+L F++T ++   LL QF
Sbjct: 1533 PILFSALVYIDDILLFSETLEDHIKLLNQF 1562


>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
            protein; Short=MP; Contains: RecName: Full=Capsid
            protein; Short=CP; Contains: RecName: Full=Aspartic
            protease; Short=PR; Contains: RecName: Full=Reverse
            transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
            polyprotein 1 [Petunia vein clearing virus]
          Length = 2180

 Score =  130 bits (326), Expect = 2e-28
 Identities = 57/90 (63%), Positives = 73/90 (81%)
 Frame = +2

Query: 29   AHWFTKFDLRSGFWQLGIHPDDRPKTAFCIPNAHYQWTVMPFGLKTTPSLFQQTITKIYS 208
            A  F+KFDL+SGFWQLGIHP++RPKT FCIP+ H+QW VMPFGLKT PSLFQ+ + KI+ 
Sbjct: 1473 AKLFSKFDLKSGFWQLGIHPNERPKTGFCIPDRHFQWKVMPFGLKTAPSLFQKAMIKIFQ 1532

Query: 209  PMLSSMLIYIDDLLFFAKTEDEMQALLTQF 298
            P+L S L+YIDD+L F++T ++   LL QF
Sbjct: 1533 PILFSALVYIDDILLFSETLEDHIKLLNQF 1562


>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
            gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
            polyprotein; Contains: RecName: Full=Movement protein;
            Short=MP; Contains: RecName: Full=Capsid protein;
            Short=CP; Contains: RecName: Full=Aspartic protease;
            Short=PR; Contains: RecName: Full=Reverse transcriptase;
            Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
            [petunia vein clearing virus]
          Length = 2179

 Score =  130 bits (326), Expect = 2e-28
 Identities = 57/90 (63%), Positives = 73/90 (81%)
 Frame = +2

Query: 29   AHWFTKFDLRSGFWQLGIHPDDRPKTAFCIPNAHYQWTVMPFGLKTTPSLFQQTITKIYS 208
            A  F+KFDL+SGFWQLGIHP++RPKT FCIP+ H+QW VMPFGLKT PSLFQ+ + KI+ 
Sbjct: 1472 AKLFSKFDLKSGFWQLGIHPNERPKTGFCIPDRHFQWKVMPFGLKTAPSLFQKAMIKIFQ 1531

Query: 209  PMLSSMLIYIDDLLFFAKTEDEMQALLTQF 298
            P+L S L+YIDD+L F++T ++   LL QF
Sbjct: 1532 PILFSALVYIDDILLFSETLEDHIKLLNQF 1561


>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1951

 Score =  129 bits (324), Expect = 4e-28
 Identities = 57/91 (62%), Positives = 74/91 (81%)
 Frame = +2

Query: 26   DAHWFTKFDLRSGFWQLGIHPDDRPKTAFCIPNAHYQWTVMPFGLKTTPSLFQQTITKIY 205
            DA  ++ FD++SGFWQLGI+P+DR KTAFCIPNA YQWTV+PFGLK  PSLFQ+ +T+I+
Sbjct: 1426 DAQVYSNFDMKSGFWQLGINPNDRYKTAFCIPNAQYQWTVLPFGLKVAPSLFQKAMTRIF 1485

Query: 206  SPMLSSMLIYIDDLLFFAKTEDEMQALLTQF 298
             P++ S+LIYIDD+L F+K E   + LL QF
Sbjct: 1486 EPIIDSILIYIDDVLLFSKDEKAHKQLLGQF 1516


>ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 803

 Score =  127 bits (319), Expect = 2e-27
 Identities = 57/91 (62%), Positives = 73/91 (80%)
 Frame = +2

Query: 26  DAHWFTKFDLRSGFWQLGIHPDDRPKTAFCIPNAHYQWTVMPFGLKTTPSLFQQTITKIY 205
           DA  ++KFD++SGFWQLGI P+DR KTAFCIPNA YQWTV+ FGLK  PSLFQ+ +T+I+
Sbjct: 502 DAQIYSKFDMKSGFWQLGIDPNDRYKTAFCIPNAQYQWTVLSFGLKVAPSLFQKAMTRIF 561

Query: 206 SPMLSSMLIYIDDLLFFAKTEDEMQALLTQF 298
            P++ S+LIYIDD+L F+K E   + LL QF
Sbjct: 562 EPIIDSILIYIDDVLLFSKDEKAHKQLLGQF 592


>ref|XP_006405665.1| hypothetical protein EUTSA_v10028343mg, partial [Eutrema salsugineum]
            gi|557106803|gb|ESQ47118.1| hypothetical protein
            EUTSA_v10028343mg, partial [Eutrema salsugineum]
          Length = 1104

 Score =  126 bits (316), Expect = 4e-27
 Identities = 54/87 (62%), Positives = 70/87 (80%)
 Frame = +2

Query: 38   FTKFDLRSGFWQLGIHPDDRPKTAFCIPNAHYQWTVMPFGLKTTPSLFQQTITKIYSPML 217
            F+KFDL+SGFWQLG+HPD+R KTAFC+PN H QW V+PFGLKT PSLFQQ + +I+ P+L
Sbjct: 890  FSKFDLKSGFWQLGVHPDERYKTAFCLPNRHLQWNVLPFGLKTAPSLFQQAMLRIFKPLL 949

Query: 218  SSMLIYIDDLLFFAKTEDEMQALLTQF 298
             + LIYIDD+L F+ +E++    L QF
Sbjct: 950  HTALIYIDDILLFSTSEEDHIRSLRQF 976


>ref|XP_006403349.1| hypothetical protein EUTSA_v10003417mg, partial [Eutrema salsugineum]
            gi|557104462|gb|ESQ44802.1| hypothetical protein
            EUTSA_v10003417mg, partial [Eutrema salsugineum]
          Length = 988

 Score =  125 bits (313), Expect = 8e-27
 Identities = 54/87 (62%), Positives = 69/87 (79%)
 Frame = +2

Query: 38   FTKFDLRSGFWQLGIHPDDRPKTAFCIPNAHYQWTVMPFGLKTTPSLFQQTITKIYSPML 217
            F KFDL+SGFWQLG+HPD+R KTAFC+PN H QW V+PFGLKT PSLFQQ + +I+ P+L
Sbjct: 756  FFKFDLKSGFWQLGVHPDERYKTAFCLPNRHLQWNVLPFGLKTAPSLFQQAMLRIFKPLL 815

Query: 218  SSMLIYIDDLLFFAKTEDEMQALLTQF 298
             + LIYIDD+L F+ +E++    L QF
Sbjct: 816  HTALIYIDDILLFSTSEEDHIRSLRQF 842


>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1645

 Score =  125 bits (313), Expect = 8e-27
 Identities = 56/91 (61%), Positives = 71/91 (78%)
 Frame = +2

Query: 26   DAHWFTKFDLRSGFWQLGIHPDDRPKTAFCIPNAHYQWTVMPFGLKTTPSLFQQTITKIY 205
            DA  ++KFD++SGFWQLGI P DR K AFCIPNA YQW V+PFGLK  PSLFQ+ +T+I+
Sbjct: 1371 DAQIYSKFDIKSGFWQLGIDPKDRYKMAFCIPNAQYQWIVLPFGLKVAPSLFQKAMTRIF 1430

Query: 206  SPMLSSMLIYIDDLLFFAKTEDEMQALLTQF 298
             P++ S+LIYIDD+L F+K E   + LL QF
Sbjct: 1431 EPIIDSILIYIDDVLLFSKDEKAHKQLLGQF 1461


>ref|XP_004489152.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 143

 Score =  124 bits (311), Expect = 1e-26
 Identities = 56/92 (60%), Positives = 72/92 (78%)
 Frame = +2

Query: 26  DAHWFTKFDLRSGFWQLGIHPDDRPKTAFCIPNAHYQWTVMPFGLKTTPSLFQQTITKIY 205
           DA  ++KFD++SGF QLG+ P DR KTAFCIPNA YQWTV+PFGLK  PSLFQ+ +T+I+
Sbjct: 37  DAQIYSKFDMKSGFCQLGVDPKDRYKTAFCIPNAQYQWTVLPFGLKVAPSLFQKAMTRIF 96

Query: 206 SPMLSSMLIYIDDLLFFAKTEDEMQALLTQFF 301
            P++ S+LIYIDD+L F+K E   + LL Q F
Sbjct: 97  EPIIDSILIYIDDVLLFSKDEKAHKQLLGQIF 128


>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
            gi|557090298|gb|ESQ31006.1| hypothetical protein
            EUTSA_v10012231mg, partial [Eutrema salsugineum]
          Length = 1904

 Score =  123 bits (309), Expect = 2e-26
 Identities = 54/90 (60%), Positives = 70/90 (77%)
 Frame = +2

Query: 29   AHWFTKFDLRSGFWQLGIHPDDRPKTAFCIPNAHYQWTVMPFGLKTTPSLFQQTITKIYS 208
            A  F+KFDL++GFWQLGI P+DRPKT+FCIP+ H+QW VMPFGLK  PSLFQ+ +TKI+ 
Sbjct: 1319 AQVFSKFDLKAGFWQLGIKPEDRPKTSFCIPDHHFQWKVMPFGLKVAPSLFQKAMTKIFE 1378

Query: 209  PMLSSMLIYIDDLLFFAKTEDEMQALLTQF 298
            P+L + L+YIDD+L F+   D    LL +F
Sbjct: 1379 PILPNALVYIDDILLFSPDIDSHTRLLEKF 1408


>ref|XP_004511013.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 335

 Score =  123 bits (309), Expect = 2e-26
 Identities = 55/81 (67%), Positives = 67/81 (82%)
 Frame = +2

Query: 26  DAHWFTKFDLRSGFWQLGIHPDDRPKTAFCIPNAHYQWTVMPFGLKTTPSLFQQTITKIY 205
           DA  ++KFD++SGFWQLGI P D  KTAFCIPNA YQWTV+PFGLK  PSLFQ+ +TKI+
Sbjct: 244 DAQIYSKFDMKSGFWQLGIDPKDCYKTAFCIPNAQYQWTVLPFGLKVAPSLFQKAMTKIF 303

Query: 206 SPMLSSMLIYIDDLLFFAKTE 268
            P+L S+LIYIDD+L F+K E
Sbjct: 304 EPILESILIYIDDVLLFSKDE 324


>ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, partial [Eutrema salsugineum]
            gi|557110784|gb|ESQ51075.1| hypothetical protein
            EUTSA_v10023188mg, partial [Eutrema salsugineum]
          Length = 1101

 Score =  120 bits (300), Expect = 3e-25
 Identities = 53/90 (58%), Positives = 68/90 (75%)
 Frame = +2

Query: 29   AHWFTKFDLRSGFWQLGIHPDDRPKTAFCIPNAHYQWTVMPFGLKTTPSLFQQTITKIYS 208
            A  F+KFDL++GFWQLGI P+DRPKT FCIP+ H+QW VMPFGLK  PSLFQ+ +TKI+ 
Sbjct: 916  AQVFSKFDLKAGFWQLGIKPEDRPKTGFCIPDHHFQWKVMPFGLKVAPSLFQKAMTKIFE 975

Query: 209  PMLSSMLIYIDDLLFFAKTEDEMQALLTQF 298
            P+L + L+ IDD+L F+   D    LL +F
Sbjct: 976  PILPNALVNIDDILLFSSDIDSHTRLLEKF 1005


>ref|XP_004512786.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 415

 Score =  119 bits (299), Expect = 3e-25
 Identities = 51/88 (57%), Positives = 69/88 (78%)
 Frame = +2

Query: 26  DAHWFTKFDLRSGFWQLGIHPDDRPKTAFCIPNAHYQWTVMPFGLKTTPSLFQQTITKIY 205
           DA  ++KFD++SGFWQ G+ P DR KT FCIPNA YQWT++ FGLK  PSLFQ+ +T+I+
Sbjct: 312 DAQIYSKFDMKSGFWQFGVDPKDRYKTVFCIPNAQYQWTILSFGLKVAPSLFQKAMTRIF 371

Query: 206 SPMLSSMLIYIDDLLFFAKTEDEMQALL 289
            P+L+S+LIYIDD+  F+K E+  + LL
Sbjct: 372 EPILNSILIYIDDVFLFSKDENAHKQLL 399


>ref|XP_004490917.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 279

 Score =  119 bits (299), Expect = 3e-25
 Identities = 53/82 (64%), Positives = 67/82 (81%)
 Frame = +2

Query: 53  LRSGFWQLGIHPDDRPKTAFCIPNAHYQWTVMPFGLKTTPSLFQQTITKIYSPMLSSMLI 232
           ++SGFWQLGI P+DR KTAFCIPNA YQWTV+PFGLK  PSLFQ+ +T+I+ P++ S+LI
Sbjct: 1   MKSGFWQLGIDPNDRYKTAFCIPNAQYQWTVLPFGLKVAPSLFQKAMTRIFEPIIDSILI 60

Query: 233 YIDDLLFFAKTEDEMQALLTQF 298
           YIDD+L F+K E   + LL QF
Sbjct: 61  YIDDVLLFSKDEKAHKQLLGQF 82