BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00030421
         (591 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358473.1| PREDICTED: pentatricopeptide repeat-containi...   250   2e-64
ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containi...   248   7e-64
emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]   248   9e-64
ref|XP_004231316.1| PREDICTED: pentatricopeptide repeat-containi...   244   1e-62
ref|XP_004300036.1| PREDICTED: pentatricopeptide repeat-containi...   234   1e-59
ref|XP_007225169.1| hypothetical protein PRUPE_ppa002283mg [Prun...   228   1e-57
ref|XP_002519368.1| pentatricopeptide repeat-containing protein,...   225   8e-57
ref|XP_006575401.1| PREDICTED: pentatricopeptide repeat-containi...   223   3e-56
ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containi...   223   4e-56
ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containi...   223   4e-56
ref|XP_007148596.1| hypothetical protein PHAVU_006G221900g [Phas...   222   5e-56
gb|AAF43948.1|AC012188_25 Contains similarity to a hypothetical ...   216   4e-54
ref|NP_172899.1| pentatricopeptide repeat-containing protein [Ar...   216   4e-54
ref|XP_003624026.1| Pentatricopeptide repeat-containing protein ...   207   2e-51
ref|XP_006307192.1| hypothetical protein CARUB_v10008784mg [Caps...   206   3e-51
ref|XP_003624021.1| Pentatricopeptide repeat-containing protein ...   206   5e-51
gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]   206   5e-51
emb|CBI29622.3| unnamed protein product [Vitis vinifera]              204   2e-50
ref|XP_007023780.1| Pentatricopeptide repeat superfamily protein...   201   1e-49
ref|XP_007023779.1| Pentatricopeptide repeat superfamily protein...   201   1e-49

>ref|XP_006358473.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Solanum tuberosum]
          Length = 758

 Score =  250 bits (639), Expect = 2e-64
 Identities = 121/191 (63%), Positives = 151/191 (79%)
 Frame = +2

Query: 2   GAHHNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVRNA 181
           GAH +V+ LF  M +C N+ PDAFVYPI+I ++G     +  HAH +K+GH  D FVRNA
Sbjct: 79  GAHSDVLYLFDKMQKC-NVAPDAFVYPILIKASGKW--GVVFHAHCIKMGHDWDRFVRNA 135

Query: 182 AMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKNIISW 361
            MD Y K+G +++ARELFDEI ERA+ADWN+MISG W WG E EA  LF+LMPEKN+++W
Sbjct: 136 IMDMYGKFGPLEIARELFDEIPERAVADWNAMISGCWNWGNEVEARSLFDLMPEKNVVTW 195

Query: 362 TAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQ 541
           TAMV+GY++  +LE+AR +F+ MPERSVVSWNAMLSGYAQNG +EE I+LF EMM  G+ 
Sbjct: 196 TAMVTGYSRRKDLENARKYFDQMPERSVVSWNAMLSGYAQNGCSEEVIRLFNEMMSCGVC 255

Query: 542 PDETTWVTVIS 574
           PDETTWVTVIS
Sbjct: 256 PDETTWVTVIS 266



 Score =  106 bits (265), Expect = 4e-21
 Identities = 64/195 (32%), Positives = 105/195 (53%), Gaps = 3/195 (1%)
 Frame = +2

Query: 2   GAHHNVISLFHLMWRCHNLKPDAFVYPIIIN---SAGNATAAISVHAHVLKLGHVSDHFV 172
           G    VI LF+ M  C  + PD   +  +I+   S G+A+ A  +   +   G   + F 
Sbjct: 237 GCSEEVIRLFNEMMSC-GVCPDETTWVTVISLCSSHGDASLAEGLVKMINDKGVRFNCFA 295

Query: 173 RNAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKNI 352
           + A +D YAK G + ++R++FDE+                                 KN+
Sbjct: 296 KTALLDMYAKCGNLAMSRKIFDELGTY------------------------------KNL 325

Query: 353 ISWTAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDT 532
           ++W AM+S YA+  +L SAR  F+ +PE++V+SWN++++GYAQNG ++ AI LF++M+  
Sbjct: 326 VTWNAMISAYARVGDLASARRLFDTVPEKNVISWNSIIAGYAQNGQSKVAIDLFKDMIAK 385

Query: 533 GLQPDETTWVTVISS 577
            + PDE T V+VIS+
Sbjct: 386 DVLPDEVTMVSVISA 400



 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
 Frame = +2

Query: 143 KLGHVSDHFVRNAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQ 322
           +LG   +    NA + AYA+ G +  AR LFD + E+ +  WNS+I+GY + G    A  
Sbjct: 318 ELGTYKNLVTWNAMISAYARVGDLASARRLFDTVPEKNVISWNSIIAGYAQNGQSKVAID 377

Query: 323 LFNLMPEKNII----------------------SWT-----------------AMVSGYA 385
           LF  M  K+++                      +W                  A++  Y+
Sbjct: 378 LFKDMIAKDVLPDEVTMVSVISACGHLGALEFGNWAVNFLEKHQIKLSISGDNALIFMYS 437

Query: 386 KCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPDETTWVT 565
           KC N++ A   F  M  R V+S+N +++G+A  G A EA++L  +M    ++PD  T+V 
Sbjct: 438 KCGNMKDAEKVFQSMDSRDVISYNTLITGFAAYGNAVEAVELLWKMKKENIEPDRITYVG 497

Query: 566 VISS 577
           V+++
Sbjct: 498 VLTA 501


>ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  248 bits (634), Expect = 7e-64
 Identities = 121/196 (61%), Positives = 155/196 (79%), Gaps = 2/196 (1%)
 Frame = +2

Query: 8   HHNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVRNAAM 187
           H  V+ ++  M  C  ++PDAFVYPI+I SAG  T  I  HAHVLKLGH SD FVRNA +
Sbjct: 81  HAKVVLMYEQMQGC-GVRPDAFVYPILIKSAG--TGGIGFHAHVLKLGHGSDAFVRNAVI 137

Query: 188 DAYAKYGFIKLARELFDEIS--ERALADWNSMISGYWRWGFENEACQLFNLMPEKNIISW 361
           D YA+ G I  AR++FDEI   ER +ADWN+M+SGYW+W  E +A  LF++MPE+N+I+W
Sbjct: 138 DMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITW 197

Query: 362 TAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQ 541
           TAMV+GYAK  +LE+AR +F+ MPERSVVSWNAMLSGYAQNG AEEA++LF+EM++ G++
Sbjct: 198 TAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIE 257

Query: 542 PDETTWVTVISSLAER 589
           PDETTWVTVIS+ + R
Sbjct: 258 PDETTWVTVISACSSR 273



 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 43/217 (19%)
 Frame = +2

Query: 56  LKPDAFVYPIIIN---SAGNATAAISVHAHVLKLGHVSDHFVRNAAMDAYAKYGFIKLAR 226
           ++PD   +  +I+   S G+   A S+   + +     + FVR A +D YAK+G +  AR
Sbjct: 256 IEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSAR 315

Query: 227 ELFDEISERALADWNSMISGYWRWGFENEACQLFN-------LMPEK------------- 346
           +LF+ +  R +  WNSMI+GY + G    A +LF        L P++             
Sbjct: 316 KLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHL 375

Query: 347 --------------------NIISWTAMVSGYAKCNNLESARSFFNVMPERSVVSWNAML 466
                               +I    AM+  Y++C ++E A+  F  M  R VVS+N ++
Sbjct: 376 GALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLI 435

Query: 467 SGYAQNGFAEEAIKLFEEMMDTGLQPDETTWVTVISS 577
           SG+A +G   EAI L   M + G++PD  T++ V+++
Sbjct: 436 SGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTA 472


>emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  248 bits (633), Expect = 9e-64
 Identities = 121/196 (61%), Positives = 154/196 (78%), Gaps = 2/196 (1%)
 Frame = +2

Query: 8   HHNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVRNAAM 187
           H  V+ +F  M  C  ++PDAFVYPI+I SAGN    I  HAHVLKLGH SD FVRNA +
Sbjct: 81  HAKVVLMFEHMQGC-GVRPDAFVYPILIKSAGNG--GIGFHAHVLKLGHGSDAFVRNAVI 137

Query: 188 DAYAKYGFIKLARELFDEIS--ERALADWNSMISGYWRWGFENEACQLFNLMPEKNIISW 361
           D YA+ G I  AR++FDEI   ER +ADWN+M+SGYW+W  E +A  LF++MPE+N+I+W
Sbjct: 138 DMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITW 197

Query: 362 TAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQ 541
           TAMV+GYAK  +LE+AR +F+ MPERSVVSWNAMLSGYAQNG AEE ++LF+EM++ G++
Sbjct: 198 TAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIE 257

Query: 542 PDETTWVTVISSLAER 589
           PDETTWVTVIS+ + R
Sbjct: 258 PDETTWVTVISACSSR 273



 Score =  103 bits (257), Expect = 4e-20
 Identities = 70/200 (35%), Positives = 104/200 (52%), Gaps = 8/200 (4%)
 Frame = +2

Query: 2   GAHHNVISLFHLMWRCHNLKPDAFVYPIIINSAGN-------ATAAISVHAHVLKLGHVS 160
           G    V+ LF  M     ++PD   +  +I++  +       A+   ++H   ++L    
Sbjct: 239 GLAEEVLRLFDEMVNA-GIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQL---- 293

Query: 161 DHFVRNAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMP 340
           + FVR A +D YAK G I  AR +FDE+             G +R               
Sbjct: 294 NCFVRTALLDMYAKCGSIGAARRIFDEL-------------GAYR--------------- 325

Query: 341 EKNIISWTAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEE 520
             N ++W AM+S Y +  NL+SAR  FN MP R+VV+WN+M++GYAQNG +  AI+LF+E
Sbjct: 326 --NSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKE 383

Query: 521 MMDT-GLQPDETTWVTVISS 577
           M+    L PDE T V+VIS+
Sbjct: 384 MITAKKLTPDEVTMVSVISA 403



 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 40/185 (21%)
 Frame = +2

Query: 143 KLGHVSDHFVRNAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQ 322
           +LG   +    NA + AY + G +  ARELF+ +  R +  WNSMI+GY + G    A +
Sbjct: 320 ELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIE 379

Query: 323 LFN-------LMPEK---------------------------------NIISWTAMVSGY 382
           LF        L P++                                 +I    AM+  Y
Sbjct: 380 LFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMY 439

Query: 383 AKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPDETTWV 562
           ++C ++E A+  F  M  R VVS+N ++SG+A +G   EAI L   M + G++PD  T++
Sbjct: 440 SRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFI 499

Query: 563 TVISS 577
            V+++
Sbjct: 500 GVLTA 504


>ref|XP_004231316.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Solanum lycopersicum]
          Length = 758

 Score =  244 bits (623), Expect = 1e-62
 Identities = 121/191 (63%), Positives = 149/191 (78%)
 Frame = +2

Query: 2   GAHHNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVRNA 181
           GA+ +V+ LF  M +  N+ PDAFVYPI+I ++G     I  HAH +K+GH  D FVRNA
Sbjct: 79  GAYSDVLYLFDKMQKS-NVAPDAFVYPILIKASGKW--GIVFHAHCIKMGHDWDRFVRNA 135

Query: 182 AMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKNIISW 361
            MD Y K+G +++ARELFDEI ERA+ADWN+MISG W WG E EA  LF+LMPEKN+++W
Sbjct: 136 IMDVYGKFGPLEIARELFDEIPERAVADWNAMISGCWNWGDEVEARSLFDLMPEKNVVTW 195

Query: 362 TAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQ 541
           TAMV+GY++  +LE+AR +F+ MPERSVVSWNAMLSGYAQNG AEE IKLF EMM   + 
Sbjct: 196 TAMVTGYSRRKDLENARKYFDQMPERSVVSWNAMLSGYAQNGCAEEVIKLFNEMMSCEVC 255

Query: 542 PDETTWVTVIS 574
           PDETTWVTVIS
Sbjct: 256 PDETTWVTVIS 266



 Score =  106 bits (265), Expect = 4e-21
 Identities = 64/195 (32%), Positives = 105/195 (53%), Gaps = 3/195 (1%)
 Frame = +2

Query: 2   GAHHNVISLFHLMWRCHNLKPDAFVYPIIIN---SAGNATAAISVHAHVLKLGHVSDHFV 172
           G    VI LF+ M  C  + PD   +  +I+   S G+ + A  +   + + G   + F 
Sbjct: 237 GCAEEVIKLFNEMMSCE-VCPDETTWVTVISLCSSHGDVSLAEGLVKMINEKGVRLNCFA 295

Query: 173 RNAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKNI 352
           + A +D YAK G + +AR++FDE+                                 KN+
Sbjct: 296 KTALLDMYAKCGNLAMARKIFDELGTY------------------------------KNL 325

Query: 353 ISWTAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDT 532
           ++W AM+S YA+  +L SAR  F+ +PE++V+SWN++++GYAQNG ++ AI LF++M+  
Sbjct: 326 VTWNAMISAYARVGDLASARGLFDKVPEKNVISWNSIIAGYAQNGESKVAIDLFKDMIAK 385

Query: 533 GLQPDETTWVTVISS 577
            + PDE T V+VIS+
Sbjct: 386 DVLPDEVTMVSVISA 400



 Score = 82.4 bits (202), Expect = 8e-14
 Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 39/184 (21%)
 Frame = +2

Query: 143 KLGHVSDHFVRNAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQ 322
           +LG   +    NA + AYA+ G +  AR LFD++ E+ +  WNS+I+GY + G    A  
Sbjct: 318 ELGTYKNLVTWNAMISAYARVGDLASARGLFDKVPEKNVISWNSIIAGYAQNGESKVAID 377

Query: 323 LFNLMPEKNII---------------------------------------SWTAMVSGYA 385
           LF  M  K+++                                        + A++  Y+
Sbjct: 378 LFKDMIAKDVLPDEVTMVSVISACGHLGALEFGNWAVNFLEKHQIKLSISGYNALIFMYS 437

Query: 386 KCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPDETTWVT 565
           KC N++ A   F  M  R V+S+N +++G A  G A EA++L  +M    ++PD  T++ 
Sbjct: 438 KCGNMKDAEKVFQSMEARDVISYNTLITGVAAYGNAIEAVELLWKMKKENIEPDRITYIG 497

Query: 566 VISS 577
           V+++
Sbjct: 498 VLTA 501


>ref|XP_004300036.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Fragaria vesca subsp. vesca]
          Length = 764

 Score =  234 bits (598), Expect = 1e-59
 Identities = 107/189 (56%), Positives = 152/189 (80%)
 Frame = +2

Query: 11  HNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVRNAAMD 190
           + V+SL+  M R  ++    FVYP++I S+G   A I+ HAHV+KLG VSD +VRNA M 
Sbjct: 86  NQVVSLYQQMQRREDIWLGTFVYPLLIKSSG--LAGIAFHAHVVKLGLVSDRYVRNAVMS 143

Query: 191 AYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKNIISWTAM 370
            Y+KYG ++ AR++F+E+ ER+L DWN+M+SGYW+WG + EAC+LF++MPEK+++SWTAM
Sbjct: 144 VYSKYGPVEHARKVFEEMPERSLVDWNNMVSGYWKWGDKVEACKLFDMMPEKDVVSWTAM 203

Query: 371 VSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPDE 550
           V+GYA+  +LE+AR  F+ +PE++VVSWNAMLS YAQNG  EEA++LF++MMD+G+QP+E
Sbjct: 204 VTGYARMKDLENARRCFDDVPEKNVVSWNAMLSAYAQNGCPEEALRLFDDMMDSGVQPNE 263

Query: 551 TTWVTVISS 577
           TTW  VIS+
Sbjct: 264 TTWAVVISA 272



 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 58/178 (32%), Positives = 91/178 (51%), Gaps = 4/178 (2%)
 Frame = +2

Query: 56  LKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDH---FVRNAAMDAYAKYGFIKLAR 226
           ++P+   + ++I++  +   +  V + + KL     H   F + A +D YAK G I+ AR
Sbjct: 259 VQPNETTWAVVISACSSCGDSSVVDSFIQKLNQKRMHLSYFGKTAMLDMYAKRGSIERAR 318

Query: 227 ELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKNIISWTAMVSGYAKCNNLES 406
           E+FDE+                                 K+  +W AM+S YA+  +L S
Sbjct: 319 EVFDELGVY------------------------------KSSGTWNAMISAYARVGDLTS 348

Query: 407 ARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEM-MDTGLQPDETTWVTVISS 577
           AR  F+ M ER V+SWN+M+SGYAQNG +  AI LF++M      +P+E T  +VIS+
Sbjct: 349 ARELFDKMLERDVISWNSMISGYAQNGQSALAIDLFKDMTASNNPKPNEVTMASVISA 406



 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 40/174 (22%)
 Frame = +2

Query: 176 NAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKN-- 349
           NA + AYA+ G +  ARELFD++ ER +  WNSMISGY + G    A  LF  M   N  
Sbjct: 334 NAMISAYARVGDLTSARELFDKMLERDVISWNSMISGYAQNGQSALAIDLFKDMTASNNP 393

Query: 350 --------------------------------------IISWTAMVSGYAKCNNLESARS 415
                                                 I  + +++S Y+KC +++ A+ 
Sbjct: 394 KPNEVTMASVISACGHLGALEIGNWAVNFLTKHHINPSISVYNSLISLYSKCGSMDDAKR 453

Query: 416 FFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPDETTWVTVISS 577
            F+ +  R VVS+NA++SG+A +G   EA+KL  +M +  L+P+  T++ ++++
Sbjct: 454 IFDEIKNRDVVSYNALISGFAAHGHGMEAVKLMMKMKEEFLEPNRETYIGILTA 507


>ref|XP_007225169.1| hypothetical protein PRUPE_ppa002283mg [Prunus persica]
           gi|462422105|gb|EMJ26368.1| hypothetical protein
           PRUPE_ppa002283mg [Prunus persica]
          Length = 692

 Score =  228 bits (580), Expect = 1e-57
 Identities = 106/191 (55%), Positives = 146/191 (76%)
 Frame = +2

Query: 5   AHHNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVRNAA 184
           AH N +   +   +C +L+   FVYP++I SAG+    I  HAHVLKLG  SD ++RNA 
Sbjct: 11  AHFNQVVSLYQKLQCCDLRIGTFVYPVLIKSAGSK--GIEFHAHVLKLGLASDPYIRNAI 68

Query: 185 MDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKNIISWT 364
           M  YAKYG ++ AR++F E+ ER LADWN+MI GYW WG + EAC+LF++MPE+N+++WT
Sbjct: 69  MGLYAKYGPVENARDVFAEMHERTLADWNNMIFGYWNWGNKAEACRLFDMMPERNVVTWT 128

Query: 365 AMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQP 544
           AMV+GYA+  +LE+AR +F+ +PE++VVSWNAMLS YAQN F EEA+KLF++MM++  QP
Sbjct: 129 AMVTGYARMKDLENARRYFDEIPEKNVVSWNAMLSAYAQNRFPEEALKLFDDMMNSRDQP 188

Query: 545 DETTWVTVISS 577
           +ETTW  VIS+
Sbjct: 189 NETTWAIVISA 199



 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 58/178 (32%), Positives = 90/178 (50%), Gaps = 5/178 (2%)
 Frame = +2

Query: 59  KPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDH---FVRNAAMDAYAKYGFIKLARE 229
           +P+   + I+I++  +        + V KL     H   F + A +D YAK G ++ AR+
Sbjct: 187 QPNETTWAIVISACSSCGDCSLADSFVQKLNQKRIHLSYFAKTALLDMYAKRGSLQAARQ 246

Query: 230 LFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKNIISWTAMVSGYAKCNNLESA 409
           +FDE+                                 +N ++W AM+S Y +  +L SA
Sbjct: 247 VFDELGV------------------------------SRNTVTWNAMISAYTRVGDLASA 276

Query: 410 RSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTG--LQPDETTWVTVISS 577
           R  F+ M ER VV+WN+M+SGYAQNG +  AI LF++M+      +PDE T V+VIS+
Sbjct: 277 RELFDKMLERDVVTWNSMISGYAQNGQSALAIDLFKDMITAADDPKPDEVTMVSVISA 334



 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 41/175 (23%)
 Frame = +2

Query: 176 NAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLM------ 337
           NA + AY + G +  ARELFD++ ER +  WNSMISGY + G    A  LF  M      
Sbjct: 261 NAMISAYTRVGDLASARELFDKMLERDVVTWNSMISGYAQNGQSALAIDLFKDMITAADD 320

Query: 338 PEKNIISWTAMVSG-----------------------------------YAKCNNLESAR 412
           P+ + ++  +++S                                    Y+KC +++ A+
Sbjct: 321 PKPDEVTMVSVISACGHLGALDIGNWVISIVRKNHIKLSISGYNSLIFLYSKCGSMDDAK 380

Query: 413 SFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPDETTWVTVISS 577
             F  M  R VVS+N +++G+A +G   EA+KL  +M    ++PD  T++ ++++
Sbjct: 381 RTFQEMTTRDVVSYNTLIAGFAAHGHGMEAVKLLSKMKGEFVEPDRVTYIVILTA 435


>ref|XP_002519368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541435|gb|EEF42985.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 524

 Score =  225 bits (573), Expect = 8e-57
 Identities = 106/192 (55%), Positives = 146/192 (76%)
 Frame = +2

Query: 2   GAHHNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVRNA 181
           G    ++S F  ++ C  +K DA +YP++I S+G     I  HAH+LKLGH SD ++RN 
Sbjct: 9   GFQDELLSFFKRIY-CR-IKLDASLYPLVIKSSGKD--GILFHAHILKLGHQSDPYIRNV 64

Query: 182 AMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKNIISW 361
            +D YAK+  I+ AR+LFDE++ER+LADWNSMI GYW+ G E EAC LF++ PE+N+I+W
Sbjct: 65  ILDMYAKHSLIENARKLFDEMTERSLADWNSMICGYWKCGNETEACSLFSMTPERNVITW 124

Query: 362 TAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQ 541
           TAMV+G++K   L+SAR +F+ MP +++VSWNA++SGYAQNGF EEA+KLF  M+  G+Q
Sbjct: 125 TAMVTGFSKIKELDSARKYFDDMPVKNIVSWNAIISGYAQNGFVEEALKLFNHMIRLGVQ 184

Query: 542 PDETTWVTVISS 577
           P+ETTW TVISS
Sbjct: 185 PNETTWATVISS 196



 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 63/196 (32%), Positives = 96/196 (48%), Gaps = 4/196 (2%)
 Frame = +2

Query: 2   GAHHNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVS---DHFV 172
           G     + LF+ M R   ++P+   +  +I+S  +        + V  L       ++FV
Sbjct: 166 GFVEEALKLFNHMIRL-GVQPNETTWATVISSCSSCGDPCRAESFVKLLDKRKIKMNYFV 224

Query: 173 RNAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKNI 352
           + A +D  AK G ++ AR +F+E+                                 +N 
Sbjct: 225 KTALLDMNAKCGNLEAARGIFNELGV------------------------------SRNS 254

Query: 353 ISWTAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDT 532
            +W AM+S Y +  +L SAR  F+ MPER  VSWN M+SGYAQNG +  AI+LF+EM+D 
Sbjct: 255 STWNAMISAYTRVGDLLSARDLFDKMPERDAVSWNTMISGYAQNGQSAMAIELFKEMIDA 314

Query: 533 -GLQPDETTWVTVISS 577
              QPDE T V++IS+
Sbjct: 315 KDSQPDEVTMVSIISA 330



 Score = 89.0 bits (219), Expect = 9e-16
 Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 43/217 (19%)
 Frame = +2

Query: 56  LKPDAFVYPIIIN---SAGNATAAISVHAHVLKLGHVSDHFVRNAAMDAYAKYGFIKLAR 226
           +K + FV   +++     GN  AA  +     +LG   +    NA + AY + G +  AR
Sbjct: 218 IKMNYFVKTALLDMNAKCGNLEAARGIFN---ELGVSRNSSTWNAMISAYTRVGDLLSAR 274

Query: 227 ELFDEISERALADWNSMISGYWRWGFENEACQLFNLMP---------------------- 340
           +LFD++ ER    WN+MISGY + G    A +LF  M                       
Sbjct: 275 DLFDKMPERDAVSWNTMISGYAQNGQSAMAIELFKEMIDAKDSQPDEVTMVSIISACGHL 334

Query: 341 ------------------EKNIISWTAMVSGYAKCNNLESARSFFNVMPERSVVSWNAML 466
                             E  I  + A++  Y+KC N++ A+  F  M  R VVS+N+++
Sbjct: 335 GALELGTWIVNFISEYRIELTISGYNALIFMYSKCGNMKEAQRIFQEMETRDVVSYNSLI 394

Query: 467 SGYAQNGFAEEAIKLFEEMMDTGLQPDETTWVTVISS 577
            G+A +G   EAIKL   M + G+ PD  T++ V+++
Sbjct: 395 GGFAAHGEGNEAIKLLLSMKEEGVDPDHVTYIGVLTA 431


>ref|XP_006575401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Glycine max]
          Length = 640

 Score =  223 bits (568), Expect = 3e-56
 Identities = 109/189 (57%), Positives = 144/189 (76%), Gaps = 2/189 (1%)
 Frame = +2

Query: 17  VISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVRNAAMDAY 196
           V+SLF  M   +++KP    YP++I SAG A   + +HA++LKLGH  DH VRNA M  Y
Sbjct: 87  VVSLFKHMQYYNDIKPYTSFYPVLIKSAGKA--GMLLHAYLLKLGHSHDHHVRNAIMGIY 144

Query: 197 AKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLM--PEKNIISWTAM 370
           AKYG I+LAR+LFDE+ +R  ADWN +ISGYW+ G E EA +LF +M   EKN+I+WT M
Sbjct: 145 AKYGCIELARKLFDEMPDRTAADWNVIISGYWKCGNEKEATRLFCMMGESEKNVITWTTM 204

Query: 371 VSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPDE 550
           V+G+AK  NLE+AR +F+ MPER V SWNAMLSGYAQ+G A+E ++LF++M+ +G +PDE
Sbjct: 205 VTGHAKMRNLETARMYFDEMPERRVASWNAMLSGYAQSGAAQETVRLFDDMLSSGNEPDE 264

Query: 551 TTWVTVISS 577
           TTWVTV+SS
Sbjct: 265 TTWVTVLSS 273



 Score =  102 bits (253), Expect = 1e-19
 Identities = 63/196 (32%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
 Frame = +2

Query: 2   GAHHNVISLFHLMWRCHNLKPDAFVYPIIINSA---GNATAAISVHAHVLKLGHVSDHFV 172
           GA    + LF  M    N +PD   +  +++S    G+   A S+   + ++   S++FV
Sbjct: 243 GAAQETVRLFDDMLSSGN-EPDETTWVTVLSSCSSLGDPCLAESIVRKLDRMNFRSNYFV 301

Query: 173 RNAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKNI 352
           + A +D +AK G +++A+++F+++                                 KN 
Sbjct: 302 KTALLDMHAKCGNLEVAQKIFEQLGVY------------------------------KNS 331

Query: 353 ISWTAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDT 532
           ++W AM+S YA+  +L  AR  FN MPER+ VSWN+M++GYAQNG + +AI+LF+EM+ +
Sbjct: 332 VTWNAMISAYARVGDLSLARDLFNKMPERNTVSWNSMIAGYAQNGESLKAIQLFKEMISS 391

Query: 533 -GLQPDETTWVTVISS 577
              +PDE T V+V S+
Sbjct: 392 KDSKPDEVTMVSVFSA 407



 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 43/218 (19%)
 Frame = +2

Query: 53  NLKPDAFVYPIIIN---SAGNATAAISVHAHVLKLGHVSDHFVRNAAMDAYAKYGFIKLA 223
           N + + FV   +++     GN   A  +     +LG   +    NA + AYA+ G + LA
Sbjct: 294 NFRSNYFVKTALLDMHAKCGNLEVAQKIFE---QLGVYKNSVTWNAMISAYARVGDLSLA 350

Query: 224 RELFDEISERALADWNSMISGYWRWGFENEACQLFNLM-------PEK------------ 346
           R+LF+++ ER    WNSMI+GY + G   +A QLF  M       P++            
Sbjct: 351 RDLFNKMPERNTVSWNSMIAGYAQNGESLKAIQLFKEMISSKDSKPDEVTMVSVFSACGH 410

Query: 347 ---------------------NIISWTAMVSGYAKCNNLESARSFFNVMPERSVVSWNAM 463
                                +I  + +++  Y +C ++E AR  F  M  + +VS+N +
Sbjct: 411 LGRLGLGNWAVSILHENHIKLSISGYNSLIFMYLRCGSMEDARITFQEMATKDLVSYNTL 470

Query: 464 LSGYAQNGFAEEAIKLFEEMMDTGLQPDETTWVTVISS 577
           +SG A +G   E+IKL  +M + G+ PD  T++ V+++
Sbjct: 471 ISGLAAHGHGTESIKLMSKMKEDGIGPDRITYIGVLTA 508


>ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  223 bits (567), Expect = 4e-56
 Identities = 110/192 (57%), Positives = 140/192 (72%)
 Frame = +2

Query: 2   GAHHNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVRNA 181
           GAH+ V+SLF       NL+P  FVY  +I  AG +      HA+VLKLGH+ DHF+RNA
Sbjct: 79  GAHNQVVSLFKCTHSL-NLRPQPFVYIYLIKLAGKSGNMF--HAYVLKLGHIDDHFIRNA 135

Query: 182 AMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKNIISW 361
            +D YAK G + LAR LF++++ER LADWNSMISG W+ G E EA  LFN+MP +NII+W
Sbjct: 136 ILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNIITW 195

Query: 362 TAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQ 541
           T+MV+GYAK  +LESAR +F+ MPERSVVSWNAM S YAQ    +EA+ LF +M++ G+ 
Sbjct: 196 TSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGIT 255

Query: 542 PDETTWVTVISS 577
           PD+TTWV  ISS
Sbjct: 256 PDDTTWVVTISS 267



 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 61/191 (31%), Positives = 102/191 (53%), Gaps = 5/191 (2%)
 Frame = +2

Query: 20  ISLFHLMWRCHNLKPDAFVYPIIINSA---GNATAAISVHAHVLKLGHVSDHFVRNAAMD 190
           ++LFH M     + PD   + + I+S    G+ T A S+   + +   V + FV+ A +D
Sbjct: 243 LNLFHQMLE-EGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLD 301

Query: 191 AYAKYGFIKLARELFDEI-SERALADWNSMISGYWRWGFENEACQLFNLMPEKNIISWTA 367
            +AK+G +++AR +FDE+ S+R    WN MIS Y R G  + A +LF+ MP+++++SW +
Sbjct: 302 MHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNS 361

Query: 368 MVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMD-TGLQP 544
           M++G                               YAQNG +  +I+LF+EM+    +QP
Sbjct: 362 MIAG-------------------------------YAQNGESAMSIELFKEMISCMDIQP 390

Query: 545 DETTWVTVISS 577
           DE T  +V+S+
Sbjct: 391 DEVTIASVLSA 401



 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 40/185 (21%)
 Frame = +2

Query: 143 KLGHVSDHFVRNAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQ 322
           +LG   +    N  + AY + G + LARELFD + +R +  WNSMI+GY + G    + +
Sbjct: 318 ELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIE 377

Query: 323 LF------------------------------------NLMPEKNI----ISWTAMVSGY 382
           LF                                    +++ EKNI      + +++  Y
Sbjct: 378 LFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMY 437

Query: 383 AKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPDETTWV 562
           +KC ++  A   F  M  R VVS+N ++SG+A NG  +EAIKL   M + G++PD  T++
Sbjct: 438 SKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYI 497

Query: 563 TVISS 577
            V+++
Sbjct: 498 GVLTA 502


>ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  223 bits (567), Expect = 4e-56
 Identities = 110/192 (57%), Positives = 140/192 (72%)
 Frame = +2

Query: 2   GAHHNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVRNA 181
           GAH+ V+SLF       NL+P  FVY  +I  AG +      HA+VLKLGH+ DHF+RNA
Sbjct: 79  GAHNQVVSLFKCTHSL-NLRPQPFVYIYLIKLAGKSGNLF--HAYVLKLGHIDDHFIRNA 135

Query: 182 AMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKNIISW 361
            +D YAK G + LAR LF++++ER LADWNSMISG W+ G E EA  LFN+MP +NII+W
Sbjct: 136 ILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNIITW 195

Query: 362 TAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQ 541
           T+MV+GYAK  +LESAR +F+ MPERSVVSWNAM S YAQ    +EA+ LF +M++ G+ 
Sbjct: 196 TSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGIT 255

Query: 542 PDETTWVTVISS 577
           PD+TTWV  ISS
Sbjct: 256 PDDTTWVVTISS 267



 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 61/191 (31%), Positives = 102/191 (53%), Gaps = 5/191 (2%)
 Frame = +2

Query: 20  ISLFHLMWRCHNLKPDAFVYPIIINSA---GNATAAISVHAHVLKLGHVSDHFVRNAAMD 190
           ++LFH M     + PD   + + I+S    G+ T A S+   + +   V + FV+ A +D
Sbjct: 243 LNLFHQMLE-EGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLD 301

Query: 191 AYAKYGFIKLARELFDEI-SERALADWNSMISGYWRWGFENEACQLFNLMPEKNIISWTA 367
            +AK+G +++AR +FDE+ S+R    WN MIS Y R G  + A +LF+ MP+++++SW +
Sbjct: 302 MHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNS 361

Query: 368 MVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMD-TGLQP 544
           M++G                               YAQNG +  +I+LF+EM+    +QP
Sbjct: 362 MIAG-------------------------------YAQNGESAMSIELFKEMISCMDIQP 390

Query: 545 DETTWVTVISS 577
           DE T  +V+S+
Sbjct: 391 DEVTIASVLSA 401



 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 40/185 (21%)
 Frame = +2

Query: 143 KLGHVSDHFVRNAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQ 322
           +LG   +    N  + AY + G + LARELFD + +R +  WNSMI+GY + G    + +
Sbjct: 318 ELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIE 377

Query: 323 LF------------------------------------NLMPEKNI----ISWTAMVSGY 382
           LF                                    +++ EKNI      + +++  Y
Sbjct: 378 LFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMY 437

Query: 383 AKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPDETTWV 562
           +KC ++  A   F  M  R VVS+N ++SG+A NG  +EAIKL   M + G++PD  T++
Sbjct: 438 SKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYI 497

Query: 563 TVISS 577
            V+++
Sbjct: 498 GVLTA 502


>ref|XP_007148596.1| hypothetical protein PHAVU_006G221900g [Phaseolus vulgaris]
           gi|561021819|gb|ESW20590.1| hypothetical protein
           PHAVU_006G221900g [Phaseolus vulgaris]
          Length = 638

 Score =  222 bits (566), Expect = 5e-56
 Identities = 112/193 (58%), Positives = 145/193 (75%), Gaps = 2/193 (1%)
 Frame = +2

Query: 5   AHHNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVRNAA 184
           A   ++S F  +  C ++KPDA  YPI+I SAG A+A +  HAH+LKLGH  DH VRNA 
Sbjct: 82  ASTELVSFFKHIQYC-DIKPDASFYPILIKSAGKASALL--HAHLLKLGHCRDHLVRNAI 138

Query: 185 MDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPE--KNIIS 358
           M  YAKYG I++AR+LFDE+  R  ADWN +ISGYW+ G E EA +LF  M E  +N+I+
Sbjct: 139 MVTYAKYGHIEVARKLFDEMLYRTTADWNVIISGYWKCGNEYEASRLFCTMGESKRNVIT 198

Query: 359 WTAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGL 538
           WT MV+G+AK  NL++AR +F+ MPERSVVSWNAMLSGYAQ+G A+E + LF +M+ +G 
Sbjct: 199 WTTMVTGHAKMRNLKAARIYFDEMPERSVVSWNAMLSGYAQSGAAQETLSLFNDMLSSGN 258

Query: 539 QPDETTWVTVISS 577
           +PDETTWVTV+SS
Sbjct: 259 EPDETTWVTVLSS 271



 Score =  113 bits (283), Expect = 3e-23
 Identities = 71/196 (36%), Positives = 109/196 (55%), Gaps = 4/196 (2%)
 Frame = +2

Query: 2   GAHHNVISLFHLMWRCHNLKPDAFVYPIIINSA---GNATAAISVHAHVLKLGHVSDHFV 172
           GA    +SLF+ M    N +PD   +  +++S    G+ + A S+   + K+   S++FV
Sbjct: 241 GAAQETLSLFNDMLSSGN-EPDETTWVTVLSSCSSLGDPSLAESIVKKLDKMSFRSNYFV 299

Query: 173 RNAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKNI 352
           + A +D +AK G ++LA+++FD++                          L+     K  
Sbjct: 300 KTALLDMHAKCGNLELAQKIFDQLG-------------------------LY-----KTS 329

Query: 353 ISWTAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDT 532
           ++W AM+S YA+  NL  AR  FN MPER  VSWN+M++GYAQNG + +AIKLF+EMM +
Sbjct: 330 VTWNAMISAYARVGNLSLARDLFNTMPERDTVSWNSMIAGYAQNGESLKAIKLFKEMMSS 389

Query: 533 -GLQPDETTWVTVISS 577
              +PDE T VTV S+
Sbjct: 390 KDSKPDEVTMVTVFSA 405


>gb|AAF43948.1|AC012188_25 Contains similarity to a hypothetical protein from Arabidopsis
           thaliana gb|AC004044.1 and contains two domains PF|01535
           of unknown function [Arabidopsis thaliana]
          Length = 455

 Score =  216 bits (550), Expect = 4e-54
 Identities = 101/193 (52%), Positives = 144/193 (74%)
 Frame = +2

Query: 11  HNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVRNAAMD 190
           ++V+ L+    RC  + PDAF +P++I SAG     I   A V KLG   D +VRN  MD
Sbjct: 3   NDVLRLYEQRSRC-GIMPDAFSFPVVIKSAGRF--GILFQALVEKLGFFKDPYVRNVIMD 59

Query: 191 AYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKNIISWTAM 370
            Y K+  ++ AR++FD+IS+R  +DWN MISGYW+WG + EAC+LF++MPE +++SWT M
Sbjct: 60  MYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVM 119

Query: 371 VSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPDE 550
           ++G+AK  +LE+AR +F+ MPE+SVVSWNAMLSGYAQNGF E+A++LF +M+  G++P+E
Sbjct: 120 ITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNE 179

Query: 551 TTWVTVISSLAER 589
           TTWV VIS+ + R
Sbjct: 180 TTWVIVISACSFR 192



 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 63/197 (31%), Positives = 107/197 (54%), Gaps = 5/197 (2%)
 Frame = +2

Query: 2   GAHHNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVS----DHF 169
           G   + + LF+ M R   ++P+   + I+I SA +  A  S+   ++KL        + F
Sbjct: 158 GFTEDALRLFNDMLRL-GVRPNETTWVIVI-SACSFRADPSLTRSLVKLIDEKRVRLNCF 215

Query: 170 VRNAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKN 349
           V+ A +D +AK   I+ AR +F+E+                                ++N
Sbjct: 216 VKTALLDMHAKCRDIQSARRIFNELGT------------------------------QRN 245

Query: 350 IISWTAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMD 529
           +++W AM+SGY +  ++ SAR  F+ MP+R+VVSWN++++GYA NG A  AI+ FE+M+D
Sbjct: 246 LVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMID 305

Query: 530 TG-LQPDETTWVTVISS 577
            G  +PDE T ++V+S+
Sbjct: 306 YGDSKPDEVTMISVLSA 322



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 40/174 (22%)
 Frame = +2

Query: 176 NAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPE---- 343
           NA +  Y + G +  AR+LFD + +R +  WNS+I+GY   G    A + F  M +    
Sbjct: 250 NAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDS 309

Query: 344 -------------------------------KNIIS-----WTAMVSGYAKCNNLESARS 415
                                          KN I      + +++  YA+  NL  A+ 
Sbjct: 310 KPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKR 369

Query: 416 FFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPDETTWVTVISS 577
            F+ M ER VVS+N + + +A NG   E + L  +M D G++PD  T+ +V+++
Sbjct: 370 VFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTA 423


>ref|NP_172899.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806395|sp|Q9M9R6.2|PPR43_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g14470 gi|332191047|gb|AEE29168.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 540

 Score =  216 bits (550), Expect = 4e-54
 Identities = 101/193 (52%), Positives = 144/193 (74%)
 Frame = +2

Query: 11  HNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVRNAAMD 190
           ++V+ L+    RC  + PDAF +P++I SAG     I   A V KLG   D +VRN  MD
Sbjct: 88  NDVLRLYEQRSRC-GIMPDAFSFPVVIKSAGRF--GILFQALVEKLGFFKDPYVRNVIMD 144

Query: 191 AYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKNIISWTAM 370
            Y K+  ++ AR++FD+IS+R  +DWN MISGYW+WG + EAC+LF++MPE +++SWT M
Sbjct: 145 MYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVM 204

Query: 371 VSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPDE 550
           ++G+AK  +LE+AR +F+ MPE+SVVSWNAMLSGYAQNGF E+A++LF +M+  G++P+E
Sbjct: 205 ITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNE 264

Query: 551 TTWVTVISSLAER 589
           TTWV VIS+ + R
Sbjct: 265 TTWVIVISACSFR 277



 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 63/197 (31%), Positives = 107/197 (54%), Gaps = 5/197 (2%)
 Frame = +2

Query: 2   GAHHNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVS----DHF 169
           G   + + LF+ M R   ++P+   + I+I SA +  A  S+   ++KL        + F
Sbjct: 243 GFTEDALRLFNDMLRL-GVRPNETTWVIVI-SACSFRADPSLTRSLVKLIDEKRVRLNCF 300

Query: 170 VRNAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKN 349
           V+ A +D +AK   I+ AR +F+E+                                ++N
Sbjct: 301 VKTALLDMHAKCRDIQSARRIFNELGT------------------------------QRN 330

Query: 350 IISWTAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMD 529
           +++W AM+SGY +  ++ SAR  F+ MP+R+VVSWN++++GYA NG A  AI+ FE+M+D
Sbjct: 331 LVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMID 390

Query: 530 TG-LQPDETTWVTVISS 577
            G  +PDE T ++V+S+
Sbjct: 391 YGDSKPDEVTMISVLSA 407



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 40/174 (22%)
 Frame = +2

Query: 176 NAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPE---- 343
           NA +  Y + G +  AR+LFD + +R +  WNS+I+GY   G    A + F  M +    
Sbjct: 335 NAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDS 394

Query: 344 -------------------------------KNIIS-----WTAMVSGYAKCNNLESARS 415
                                          KN I      + +++  YA+  NL  A+ 
Sbjct: 395 KPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKR 454

Query: 416 FFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPDETTWVTVISS 577
            F+ M ER VVS+N + + +A NG   E + L  +M D G++PD  T+ +V+++
Sbjct: 455 VFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTA 508


>ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124360495|gb|ABN08505.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355499041|gb|AES80244.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 646

 Score =  207 bits (526), Expect = 2e-51
 Identities = 105/191 (54%), Positives = 139/191 (72%), Gaps = 5/191 (2%)
 Frame = +2

Query: 20  ISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVRNAAMDAYA 199
           +SLF  M R  N+KP+   Y +++ SAG+ +      AHVLK G+  DH+VRN  +  YA
Sbjct: 88  VSLFKHMLRHCNIKPNTSFYSVMMKSAGSESMLFL--AHVLKSGYDRDHYVRNGILGIYA 145

Query: 200 KYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPE----KNIISWTA 367
           KYG I+ AR+LFDE+ +R +ADWN MISGYW+ G E EA  LF++M +    +N+I+WT 
Sbjct: 146 KYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTT 205

Query: 368 MVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTG-LQP 544
           M++G+AK  NL++AR +F+ MPERSVVSWNAMLSGYAQ G  EE I+LF +M+  G +QP
Sbjct: 206 MITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQP 265

Query: 545 DETTWVTVISS 577
           DETTWVTVISS
Sbjct: 266 DETTWVTVISS 276



 Score =  102 bits (253), Expect = 1e-19
 Identities = 64/197 (32%), Positives = 105/197 (53%), Gaps = 5/197 (2%)
 Frame = +2

Query: 2   GAHHNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKL----GHVSDHF 169
           GA    I LF+ M    N++PD   +  +I+S  +        + V KL    G   ++F
Sbjct: 245 GAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYF 304

Query: 170 VRNAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKN 349
           V+ A +D +AK G ++ A ++F+++             G +++               ++
Sbjct: 305 VKTALLDMHAKCGNLEAAHKIFEQL-------------GVYKY---------------RS 336

Query: 350 IISWTAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMD 529
            + W AM+S YA+  +L SAR  F+ MP+R  VSWN+M++GY QNG + +AIKLFEEM+ 
Sbjct: 337 SVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMIS 396

Query: 530 T-GLQPDETTWVTVISS 577
           +   +PDE T V+V S+
Sbjct: 397 SEDSKPDEVTMVSVFSA 413



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 30/70 (42%), Positives = 42/70 (60%)
 Frame = +2

Query: 380 YAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPDETTW 559
           YAK   +E AR  F+ MP+R+V  WN M+SGY + G  EEA  LF  M D  +  +  TW
Sbjct: 144 YAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITW 203

Query: 560 VTVISSLAER 589
            T+I+  A++
Sbjct: 204 TTMITGHAKK 213


>ref|XP_006307192.1| hypothetical protein CARUB_v10008784mg [Capsella rubella]
           gi|482575903|gb|EOA40090.1| hypothetical protein
           CARUB_v10008784mg [Capsella rubella]
          Length = 543

 Score =  206 bits (525), Expect = 3e-51
 Identities = 98/194 (50%), Positives = 141/194 (72%), Gaps = 2/194 (1%)
 Frame = +2

Query: 14  NVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVRNAAMDA 193
           + + L+    RC  + PDA+ +P++I SAG     +   A V KLG   D +VRN  MD 
Sbjct: 89  DALRLYEQRSRC-GILPDAWSFPVVIKSAGEF--GVLFQAIVEKLGFFKDPYVRNVIMDM 145

Query: 194 YAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKN--IISWTA 367
           Y K+  ++ AR++FD+I+ R  +DWN MISGYW+WG + EAC+LF++MPE +  ++SWT 
Sbjct: 146 YVKHESVQSARKVFDQITHRVGSDWNVMISGYWKWGNKEEACKLFDMMPENDTDVVSWTV 205

Query: 368 MVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPD 547
           M++G+AK  +LE+AR +F++MPE+SVVSWNAMLSGYAQNGF EE I+LF +M+  G++P+
Sbjct: 206 MITGFAKLKDLENARKYFDLMPEKSVVSWNAMLSGYAQNGFTEETIRLFNDMLRFGVKPN 265

Query: 548 ETTWVTVISSLAER 589
           ETTWV VIS+ + R
Sbjct: 266 ETTWVIVISACSLR 279



 Score =  102 bits (255), Expect = 6e-20
 Identities = 68/197 (34%), Positives = 106/197 (53%), Gaps = 5/197 (2%)
 Frame = +2

Query: 2   GAHHNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVS----DHF 169
           G     I LF+ M R   +KP+   + I+I SA +  A  S+   ++KL H      + +
Sbjct: 245 GFTEETIRLFNDMLR-FGVKPNETTWVIVI-SACSLRADPSLAHSLVKLIHEQRVRLNCY 302

Query: 170 VRNAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKN 349
           V+ A +D +AK   I  AR +F+E+                                +KN
Sbjct: 303 VKTALLDMHAKCRDILSARRIFNELGT------------------------------QKN 332

Query: 350 IISWTAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMD 529
           +++W AM+SGY +  +L SAR  F++MPER++VSWN+M++GYA NG    AI+ FEEM+D
Sbjct: 333 LVTWNAMISGYTRIGDLTSARQLFDIMPERNIVSWNSMIAGYAHNGQPALAIEFFEEMID 392

Query: 530 TG-LQPDETTWVTVISS 577
            G  +PDE T ++V+S+
Sbjct: 393 YGDSKPDEVTMISVLSA 409



 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 40/229 (17%)
 Frame = +2

Query: 11  HNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVRNAAMD 190
           H+++ L H       ++ + +V   +++        +S      +LG   +    NA + 
Sbjct: 286 HSLVKLIHEQ----RVRLNCYVKTALLDMHAKCRDILSARRIFNELGTQKNLVTWNAMIS 341

Query: 191 AYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLM-------PEK- 346
            Y + G +  AR+LFD + ER +  WNSMI+GY   G    A + F  M       P++ 
Sbjct: 342 GYTRIGDLTSARQLFDIMPERNIVSWNSMIAGYAHNGQPALAIEFFEEMIDYGDSKPDEV 401

Query: 347 --------------------------------NIISWTAMVSGYAKCNNLESARSFFNVM 430
                                           N+  + +++  YA+C NL  A+  F+  
Sbjct: 402 TMISVLSACGHMGDLELGNCIVDYISKNQIKLNVSGYRSLIFMYARCGNLWEAKRVFDET 461

Query: 431 PERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPDETTWVTVISS 577
            ER VVS+N +LS +A NG   E ++LF +M   G++PD TT+ +V+++
Sbjct: 462 KERDVVSYNTLLSAFAANGDGVETLRLFSKMKGEGIEPDHTTYTSVLTA 510


>ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499036|gb|AES80239.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 632

 Score =  206 bits (523), Expect = 5e-51
 Identities = 107/199 (53%), Positives = 144/199 (72%), Gaps = 7/199 (3%)
 Frame = +2

Query: 2   GAHHNV-ISLF-HLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVR 175
           G H  V +SLF H++  C ++KP+A  Y +++ SAG+ +      AHVLK G+  DH+VR
Sbjct: 66  GVHSQVFVSLFKHMLQHC-DIKPNASFYSVMMKSAGSESMLFL--AHVLKSGYDRDHYVR 122

Query: 176 NAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPE---- 343
           N  +  YAKYG I+ AR+LFDE+ +R +ADWN MISGYW+ G E EA  LF++M +    
Sbjct: 123 NGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEIS 182

Query: 344 KNIISWTAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEM 523
           +N+I+WT M++G+AK  NL++AR +F+ MPERSVVSWNAMLSGYAQ G  EE I+LF +M
Sbjct: 183 RNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDM 242

Query: 524 MDTG-LQPDETTWVTVISS 577
           +  G +QPDETTW TVISS
Sbjct: 243 LSPGNVQPDETTWATVISS 261



 Score =  100 bits (250), Expect = 2e-19
 Identities = 63/198 (31%), Positives = 105/198 (53%), Gaps = 6/198 (3%)
 Frame = +2

Query: 2   GAHHNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKL----GHVSDHF 169
           GA    I LF+ M    N++PD   +  +I+S  +        + V KL    G   ++F
Sbjct: 230 GAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYF 289

Query: 170 VRNAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKN 349
           V+ A +D +AK G ++ A ++F+++             G +++               ++
Sbjct: 290 VKTALLDMHAKCGNLEAAHKIFEQL-------------GVYKY---------------RS 321

Query: 350 IISWTAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMM- 526
            + W AM+S YA+  +L SA+  F+ MP+R  VSWN+M++GY QNG + +AIKLFEEM+ 
Sbjct: 322 SVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMIS 381

Query: 527 -DTGLQPDETTWVTVISS 577
            +   +PDE T V+V S+
Sbjct: 382 SEDSRKPDEVTMVSVFSA 399



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 30/70 (42%), Positives = 42/70 (60%)
 Frame = +2

Query: 380 YAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPDETTW 559
           YAK   +E AR  F+ MP+R+V  WN M+SGY + G  EEA  LF  M D  +  +  TW
Sbjct: 129 YAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITW 188

Query: 560 VTVISSLAER 589
            T+I+  A++
Sbjct: 189 TTMITGHAKK 198


>gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 575

 Score =  206 bits (523), Expect = 5e-51
 Identities = 107/199 (53%), Positives = 144/199 (72%), Gaps = 7/199 (3%)
 Frame = +2

Query: 2   GAHHNV-ISLF-HLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVR 175
           G H  V +SLF H++  C ++KP+A  Y +++ SAG+ +      AHVLK G+  DH+VR
Sbjct: 9   GVHSQVFVSLFKHMLQHC-DIKPNASFYSVMMKSAGSESMLFL--AHVLKSGYDRDHYVR 65

Query: 176 NAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPE---- 343
           N  +  YAKYG I+ AR+LFDE+ +R +ADWN MISGYW+ G E EA  LF++M +    
Sbjct: 66  NGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEIS 125

Query: 344 KNIISWTAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEM 523
           +N+I+WT M++G+AK  NL++AR +F+ MPERSVVSWNAMLSGYAQ G  EE I+LF +M
Sbjct: 126 RNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDM 185

Query: 524 MDTG-LQPDETTWVTVISS 577
           +  G +QPDETTW TVISS
Sbjct: 186 LSPGNVQPDETTWATVISS 204



 Score =  100 bits (250), Expect = 2e-19
 Identities = 63/198 (31%), Positives = 105/198 (53%), Gaps = 6/198 (3%)
 Frame = +2

Query: 2   GAHHNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKL----GHVSDHF 169
           GA    I LF+ M    N++PD   +  +I+S  +        + V KL    G   ++F
Sbjct: 173 GAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYF 232

Query: 170 VRNAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKN 349
           V+ A +D +AK G ++ A ++F+++             G +++               ++
Sbjct: 233 VKTALLDMHAKCGNLEAAHKIFEQL-------------GVYKY---------------RS 264

Query: 350 IISWTAMVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMM- 526
            + W AM+S YA+  +L SA+  F+ MP+R  VSWN+M++GY QNG + +AIKLFEEM+ 
Sbjct: 265 SVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMIS 324

Query: 527 -DTGLQPDETTWVTVISS 577
            +   +PDE T V+V S+
Sbjct: 325 SEDSRKPDEVTMVSVFSA 342



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 30/70 (42%), Positives = 42/70 (60%)
 Frame = +2

Query: 380 YAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPDETTW 559
           YAK   +E AR  F+ MP+R+V  WN M+SGY + G  EEA  LF  M D  +  +  TW
Sbjct: 72  YAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITW 131

Query: 560 VTVISSLAER 589
            T+I+  A++
Sbjct: 132 TTMITGHAKK 141


>emb|CBI29622.3| unnamed protein product [Vitis vinifera]
          Length = 603

 Score =  204 bits (518), Expect = 2e-50
 Identities = 104/190 (54%), Positives = 133/190 (70%)
 Frame = +2

Query: 8   HHNVISLFHLMWRCHNLKPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVRNAAM 187
           H  V+ ++  M  C  ++PDAFVYPI+I SAG  T  I  HAHVLKLGH SD FVRNA +
Sbjct: 11  HAKVVLMYEQMQGC-GVRPDAFVYPILIKSAG--TGGIGFHAHVLKLGHGSDAFVRNAVI 67

Query: 188 DAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKNIISWTA 367
           D YA                 R +ADWN+M+SGYW+W  E +A  LF++MPE+N+I+WTA
Sbjct: 68  DMYA-----------------RKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTA 110

Query: 368 MVSGYAKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPD 547
           MV+GYAK  +LE+AR +F+ MPERSVVSWNAMLSGYAQNG AEEA++LF+EM+  G   +
Sbjct: 111 MVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEML--GAYRN 168

Query: 548 ETTWVTVISS 577
             TW  +IS+
Sbjct: 169 SVTWNAMISA 178



 Score = 82.4 bits (202), Expect = 8e-14
 Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 40/184 (21%)
 Frame = +2

Query: 146 LGHVSDHFVRNAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQL 325
           LG   +    NA + AY + G +  AR+LF+ +  R +  WNSMI+GY + G    A +L
Sbjct: 163 LGAYRNSVTWNAMISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIEL 222

Query: 326 FN-------LMPEK---------------------------------NIISWTAMVSGYA 385
           F        L P++                                 +I    AM+  Y+
Sbjct: 223 FKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYS 282

Query: 386 KCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPDETTWVT 565
           +C ++E A+  F  M  R VVS+N ++SG+A +G   EAI L   M + G++PD  T++ 
Sbjct: 283 RCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIG 342

Query: 566 VISS 577
           V+++
Sbjct: 343 VLTA 346


>ref|XP_007023780.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma
           cacao] gi|590617403|ref|XP_007023781.1|
           Pentatricopeptide repeat superfamily protein isoform 2
           [Theobroma cacao] gi|508779146|gb|EOY26402.1|
           Pentatricopeptide repeat superfamily protein isoform 2
           [Theobroma cacao] gi|508779147|gb|EOY26403.1|
           Pentatricopeptide repeat superfamily protein isoform 2
           [Theobroma cacao]
          Length = 777

 Score =  201 bits (512), Expect = 1e-49
 Identities = 105/186 (56%), Positives = 135/186 (72%), Gaps = 9/186 (4%)
 Frame = +2

Query: 47  CHNL-----KPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVRNAAMDAYAKYGF 211
           CH L     KP A +YPI+I S+    A I  H+H++KLGH  D   RNA MD+YAK+G 
Sbjct: 103 CHQLLASTNKPAA-LYPILIKSS--VKAGILFHSHLVKLGHHHDPHTRNALMDSYAKFGP 159

Query: 212 IKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPE--KNIISWTAMVSGYA 385
           I+ AR+LFDE+  R   DWNSMISGYW+WG E EAC LFNLMPE  +N+++WTAMV+G A
Sbjct: 160 IEAARKLFDEMPGRMAEDWNSMISGYWKWGKEAEACCLFNLMPENKRNVVTWTAMVTGSA 219

Query: 386 KCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDT--GLQPDETTW 559
              +L +AR +F+ MP R+VVSWNAMLSGYA+NGFA+EA+ LF  M+    G++P++ TW
Sbjct: 220 NMKDLITARRYFDRMPRRNVVSWNAMLSGYAKNGFAKEALHLFLHMIKAGDGIEPNQITW 279

Query: 560 VTVISS 577
           V VISS
Sbjct: 280 VAVISS 285



 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 4/185 (2%)
 Frame = +2

Query: 32  HLMWRCHNLKPDAFVYPIIINSAGNAT---AAISVHAHVLKLGHVSDHFVRNAAMDAYAK 202
           H++     ++P+   +  +I+S  +      A SV   + K     + +++ A +D +AK
Sbjct: 264 HMIKAGDGIEPNQITWVAVISSCSSLADPCLADSVVKFLDKKKIQLNSYLKTALLDMHAK 323

Query: 203 YGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKNIISWTAMVSGY 382
            G ++ A+++FDE  E                               ++  +W AM+S Y
Sbjct: 324 CGNLETAQKIFDEFGEH------------------------------RSCTTWNAMISAY 353

Query: 383 AKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMM-DTGLQPDETTW 559
            +  NL  AR  F+ MP R+VVSWN+M++G+AQNG    AI+LF+EM+  T L+PDE T 
Sbjct: 354 MRFGNLALARELFDKMPVRNVVSWNSMIAGFAQNGQPAMAIQLFKEMIATTNLKPDEVTM 413

Query: 560 VTVIS 574
           V+VIS
Sbjct: 414 VSVIS 418



 Score = 86.3 bits (212), Expect = 6e-15
 Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 40/174 (22%)
 Frame = +2

Query: 176 NAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLF-------NL 334
           NA + AY ++G + LARELFD++  R +  WNSMI+G+ + G    A QLF       NL
Sbjct: 347 NAMISAYMRFGNLALARELFDKMPVRNVVSWNSMIAGFAQNGQPAMAIQLFKEMIATTNL 406

Query: 335 MPEK---------------------------------NIISWTAMVSGYAKCNNLESARS 415
            P++                                 +I  +  ++  Y+KC +++ A  
Sbjct: 407 KPDEVTMVSVISVCGQLGALEMGNWVVNFIVENQIKLSISGYNTLIFMYSKCGSMKDAER 466

Query: 416 FFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPDETTWVTVISS 577
            F  M  R  +S+NA++SG+  +G   EA++L   M   G++PD  T++ V+++
Sbjct: 467 IFQEMKRRDTISYNALVSGFGAHGRGIEAVELMSRMRKEGIEPDHITYIGVLTA 520


>ref|XP_007023779.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao] gi|508779145|gb|EOY26401.1| Pentatricopeptide
           repeat superfamily protein isoform 1 [Theobroma cacao]
          Length = 833

 Score =  201 bits (512), Expect = 1e-49
 Identities = 105/186 (56%), Positives = 135/186 (72%), Gaps = 9/186 (4%)
 Frame = +2

Query: 47  CHNL-----KPDAFVYPIIINSAGNATAAISVHAHVLKLGHVSDHFVRNAAMDAYAKYGF 211
           CH L     KP A +YPI+I S+    A I  H+H++KLGH  D   RNA MD+YAK+G 
Sbjct: 103 CHQLLASTNKPAA-LYPILIKSS--VKAGILFHSHLVKLGHHHDPHTRNALMDSYAKFGP 159

Query: 212 IKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPE--KNIISWTAMVSGYA 385
           I+ AR+LFDE+  R   DWNSMISGYW+WG E EAC LFNLMPE  +N+++WTAMV+G A
Sbjct: 160 IEAARKLFDEMPGRMAEDWNSMISGYWKWGKEAEACCLFNLMPENKRNVVTWTAMVTGSA 219

Query: 386 KCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDT--GLQPDETTW 559
              +L +AR +F+ MP R+VVSWNAMLSGYA+NGFA+EA+ LF  M+    G++P++ TW
Sbjct: 220 NMKDLITARRYFDRMPRRNVVSWNAMLSGYAKNGFAKEALHLFLHMIKAGDGIEPNQITW 279

Query: 560 VTVISS 577
           V VISS
Sbjct: 280 VAVISS 285



 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 4/185 (2%)
 Frame = +2

Query: 32  HLMWRCHNLKPDAFVYPIIINSAGNAT---AAISVHAHVLKLGHVSDHFVRNAAMDAYAK 202
           H++     ++P+   +  +I+S  +      A SV   + K     + +++ A +D +AK
Sbjct: 264 HMIKAGDGIEPNQITWVAVISSCSSLADPCLADSVVKFLDKKKIQLNSYLKTALLDMHAK 323

Query: 203 YGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLFNLMPEKNIISWTAMVSGY 382
            G ++ A+++FDE  E                               ++  +W AM+S Y
Sbjct: 324 CGNLETAQKIFDEFGEH------------------------------RSCTTWNAMISAY 353

Query: 383 AKCNNLESARSFFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMM-DTGLQPDETTW 559
            +  NL  AR  F+ MP R+VVSWN+M++G+AQNG    AI+LF+EM+  T L+PDE T 
Sbjct: 354 MRFGNLALARELFDKMPVRNVVSWNSMIAGFAQNGQPAMAIQLFKEMIATTNLKPDEVTM 413

Query: 560 VTVIS 574
           V+VIS
Sbjct: 414 VSVIS 418



 Score = 86.3 bits (212), Expect = 6e-15
 Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 40/174 (22%)
 Frame = +2

Query: 176 NAAMDAYAKYGFIKLARELFDEISERALADWNSMISGYWRWGFENEACQLF-------NL 334
           NA + AY ++G + LARELFD++  R +  WNSMI+G+ + G    A QLF       NL
Sbjct: 347 NAMISAYMRFGNLALARELFDKMPVRNVVSWNSMIAGFAQNGQPAMAIQLFKEMIATTNL 406

Query: 335 MPEK---------------------------------NIISWTAMVSGYAKCNNLESARS 415
            P++                                 +I  +  ++  Y+KC +++ A  
Sbjct: 407 KPDEVTMVSVISVCGQLGALEMGNWVVNFIVENQIKLSISGYNTLIFMYSKCGSMKDAER 466

Query: 416 FFNVMPERSVVSWNAMLSGYAQNGFAEEAIKLFEEMMDTGLQPDETTWVTVISS 577
            F  M  R  +S+NA++SG+  +G   EA++L   M   G++PD  T++ V+++
Sbjct: 467 IFQEMKRRDTISYNALVSGFGAHGRGIEAVELMSRMRKEGIEPDHITYIGVLTA 520