BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00030304
         (323 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]      70   5e-13
gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Tritic...    69   1e-12
gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tausc...    69   2e-12
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    74   2e-11
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    73   4e-11
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...    72   8e-11
emb|CCH50954.1| T1.2 [Malus x robusta]                                 64   9e-11
gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic...    71   1e-10
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]          71   1e-10
gb|EMS52533.1| ATP-citrate synthase [Triticum urartu]                  71   2e-10
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic...    71   2e-10
gb|ABN08628.1| RNA-directed DNA polymerase (Reverse transcriptas...    69   9e-10
gb|ABB00038.1| reverse transcriptase family member [Glycine max]       68   1e-09
gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus not...    60   3e-09
gb|EMT09227.1| Putative dolichyl-phosphate-mannose--glycolipid a...    65   8e-09
emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcripta...    60   1e-08
gb|EXB56439.1| putative CRM domain-containing protein [Morus not...    63   4e-08
gb|ACN78498.1| putative reverse transcriptase [Arachis hypogaea]       63   4e-08
gb|EXC31207.1| DNA ligase 4 [Morus notabilis]                          63   5e-08
gb|EMS57362.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic...    63   5e-08

>gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]
          Length = 605

 Score = 70.5 bits (171), Expect(2) = 5e-13
 Identities = 41/83 (49%), Positives = 53/83 (63%)
 Frame = -3

Query: 249 KDLLMTFIEQQKLYMIKHQEIIIWRALGRKRVTNRYIDLIKDMYDNAITIVKSKVGLTNV 70
           KDL M FI+ +K Y  K    ++W AL + +V  +YI LIKDMYDN +T V++    T+ 
Sbjct: 119 KDLHMVFIDLEKSYD-KIPRNVMWWALKKHKVPAKYITLIKDMYDNVVTSVRTSDVDTDD 177

Query: 69  LPITVDLHQVSTLSLCLFALVMD 1
            PI + LHQ S LS  LFALVMD
Sbjct: 178 FPIKIGLHQGSALSPYLFALVMD 200



 Score = 29.3 bits (64), Expect(2) = 5e-13
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -1

Query: 323 RAKTIVSINQFGFKLGRSTMDA 258
           R  T V+ NQFGF  GRSTM+A
Sbjct: 82  RRMTSVTKNQFGFMPGRSTMEA 103


>gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Triticum urartu]
          Length = 974

 Score = 69.3 bits (168), Expect(2) = 1e-12
 Identities = 40/83 (48%), Positives = 52/83 (62%)
 Frame = -3

Query: 249 KDLLMTFIEQQKLYMIKHQEIIIWRALGRKRVTNRYIDLIKDMYDNAITIVKSKVGLTNV 70
           KDL M FI+ +K Y  K    ++W AL + +V  +YI LIKDMYDN +T V++     + 
Sbjct: 85  KDLHMVFIDLEKAYD-KIPRNVMWWALEKHKVPTKYITLIKDMYDNVVTSVRTSDVDIDD 143

Query: 69  LPITVDLHQVSTLSLCLFALVMD 1
            PI + LHQ S LS  LFALVMD
Sbjct: 144 FPIKIGLHQGSALSPYLFALVMD 166



 Score = 29.3 bits (64), Expect(2) = 1e-12
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -1

Query: 323 RAKTIVSINQFGFKLGRSTMDA 258
           R  T V+ NQFGF  GRSTM+A
Sbjct: 48  RRMTSVTKNQFGFMPGRSTMEA 69


>gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tauschii]
          Length = 1134

 Score = 68.6 bits (166), Expect(2) = 2e-12
 Identities = 40/83 (48%), Positives = 53/83 (63%)
 Frame = -3

Query: 249 KDLLMTFIEQQKLYMIKHQEIIIWRALGRKRVTNRYIDLIKDMYDNAITIVKSKVGLTNV 70
           KDL M FI+ +K Y    + +  W AL + +V  +YI LIKDMYDNA+T V++    T+ 
Sbjct: 449 KDLHMVFIDLEKAYNKIPRNL--WWALDKHKVPAKYITLIKDMYDNAVTSVRTSDIDTDD 506

Query: 69  LPITVDLHQVSTLSLCLFALVMD 1
            PI + LHQ S LS  LFAL+MD
Sbjct: 507 FPIKIGLHQGSALSPYLFALLMD 529



 Score = 29.3 bits (64), Expect(2) = 2e-12
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -1

Query: 323 RAKTIVSINQFGFKLGRSTMDA 258
           R  T V+ NQFGF  GRSTM+A
Sbjct: 412 RRMTSVTKNQFGFMPGRSTMEA 433


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 48/103 (46%), Positives = 62/103 (60%)
 Frame = -3

Query: 309 SVNKSIWI*AREINHGR*ILKDLLMTFIEQQKLYMIKHQEIIIWRALGRKRVTNRYIDLI 130
           S  ++I++  R +   R   KDL M FI+ +K Y    ++II WR L +K V   YI  I
Sbjct: 280 STMEAIYLLRRLMERYRDGKKDLHMVFIDLEKAYDRVSRDII-WRILEKKGVRVAYIQAI 338

Query: 129 KDMYDNAITIVKSKVGLTNVLPITVDLHQVSTLSLCLFALVMD 1
           KDMY+ A T V++  G T   PITV LHQ S+LS  LFALVMD
Sbjct: 339 KDMYEGAKTAVRTYEGQTESFPITVGLHQGSSLSPYLFALVMD 381


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 45/103 (43%), Positives = 63/103 (61%)
 Frame = -3

Query: 309 SVNKSIWI*AREINHGR*ILKDLLMTFIEQQKLYMIKHQEIIIWRALGRKRVTNRYIDLI 130
           S  ++I++  R +   R   KDL + F + +K Y    +EI+ W+AL +KRV   YI  I
Sbjct: 258 STMEAIYLLQRVMERYRTDKKDLHLVFFDLEKGYDRVPREIL-WKALEKKRVRIAYIRAI 316

Query: 129 KDMYDNAITIVKSKVGLTNVLPITVDLHQVSTLSLCLFALVMD 1
           KDMY+ A T VK++ G T   PIT+ LHQ STL+  LF LV+D
Sbjct: 317 KDMYERASTSVKTQDGTTEDFPITIGLHQGSTLTPYLFTLVLD 359


>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
           distachyon]
          Length = 567

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 41/83 (49%), Positives = 53/83 (63%)
 Frame = -3

Query: 249 KDLLMTFIEQQKLYMIKHQEIIIWRALGRKRVTNRYIDLIKDMYDNAITIVKSKVGLTNV 70
           KDL M FI+ +K Y  K    ++W AL + +V  +YI LIKDMYDN +T V++  G T+ 
Sbjct: 214 KDLHMVFIDLEKAYD-KIPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRTSDGDTDD 272

Query: 69  LPITVDLHQVSTLSLCLFALVMD 1
            PI + LHQ S LS  LF LVMD
Sbjct: 273 FPIKIGLHQGSALSPYLFDLVMD 295


>emb|CCH50954.1| T1.2 [Malus x robusta]
          Length = 554

 Score = 64.3 bits (155), Expect(2) = 9e-11
 Identities = 39/79 (49%), Positives = 49/79 (62%)
 Frame = -3

Query: 246 DLLMTFIEQQKLYMIKHQEIIIWRALGRKRVTNRYIDLIKDMYDNAITIVKSKVGLTNVL 67
           DL M FI+ +K+Y    ++I+ WR L +K V   YI  IKDMYD A T V++  G     
Sbjct: 320 DLHMVFIDLEKVYDRVPRDIL-WRILEKKGVRVAYIQAIKDMYDGAKTAVRTYEGQIESF 378

Query: 66  PITVDLHQVSTLSLCLFAL 10
           PITV LHQ S+LS  LFAL
Sbjct: 379 PITVRLHQGSSLSPYLFAL 397



 Score = 27.7 bits (60), Expect(2) = 9e-11
 Identities = 15/24 (62%), Positives = 16/24 (66%)
 Frame = -1

Query: 323 RAKTIVSINQFGFKLGRSTMDARY 252
           R KT VS NQF F  G STM+A Y
Sbjct: 282 RQKTRVSDNQFKFMPGCSTMEAIY 305


>gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
          Length = 3154

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 41/83 (49%), Positives = 53/83 (63%)
 Frame = -3

Query: 249  KDLLMTFIEQQKLYMIKHQEIIIWRALGRKRVTNRYIDLIKDMYDNAITIVKSKVGLTNV 70
            KDL M FI+ +K Y  K    ++W AL + +V  +YI LIKDMYDN +T V++    T+ 
Sbjct: 2192 KDLHMVFIDLEKAYD-KMPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRTSDVDTDD 2250

Query: 69   LPITVDLHQVSTLSLCLFALVMD 1
             PI + LHQ S LS  LFALVMD
Sbjct: 2251 FPIKIGLHQGSALSPYLFALVMD 2273


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 41/103 (39%), Positives = 63/103 (61%)
 Frame = -3

Query: 309 SVNKSIWI*AREINHGR*ILKDLLMTFIEQQKLYMIKHQEIIIWRALGRKRVTNRYIDLI 130
           S+ ++I++  R +   R   +DL M FI+ +K Y    +E++ W+ L + RV   YI  I
Sbjct: 170 SITEAIYLLRRMMERYRSNKRDLHMVFIDLEKAYDRVPREVL-WKVLEKMRVRIAYIRAI 228

Query: 129 KDMYDNAITIVKSKVGLTNVLPITVDLHQVSTLSLCLFALVMD 1
           KDMYD A T VK++ G+T   PI + LHQ S+LS  LF +V++
Sbjct: 229 KDMYDGATTSVKTQGGVTEEFPIGIGLHQGSSLSPYLFTIVLE 271


>gb|EMS52533.1| ATP-citrate synthase [Triticum urartu]
          Length = 589

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 41/83 (49%), Positives = 53/83 (63%)
 Frame = -3

Query: 249 KDLLMTFIEQQKLYMIKHQEIIIWRALGRKRVTNRYIDLIKDMYDNAITIVKSKVGLTNV 70
           KDL M FI+ +K Y  K    ++W AL + +V  +YI LIKDMYDN +T V++    T+ 
Sbjct: 407 KDLHMVFIDLEKAYD-KIPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRTSNVDTDD 465

Query: 69  LPITVDLHQVSTLSLCLFALVMD 1
            PI + LHQ S LS  LFALVMD
Sbjct: 466 FPIKIGLHQGSALSPYLFALVMD 488


>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
          Length = 882

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 41/83 (49%), Positives = 53/83 (63%)
 Frame = -3

Query: 249 KDLLMTFIEQQKLYMIKHQEIIIWRALGRKRVTNRYIDLIKDMYDNAITIVKSKVGLTNV 70
           KDL M FI+ +K Y  K    ++W AL + +V  +YI LIKDMYDN +T V++    T+ 
Sbjct: 164 KDLHMVFIDLEKAYD-KIPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRTSDVDTDD 222

Query: 69  LPITVDLHQVSTLSLCLFALVMD 1
            PI + LHQ S LS  LFALVMD
Sbjct: 223 FPIKIGLHQGSALSPYLFALVMD 245


>gb|ABN08628.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 243

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 40/83 (48%), Positives = 54/83 (65%)
 Frame = -3

Query: 249 KDLLMTFIEQQKLYMIKHQEIIIWRALGRKRVTNRYIDLIKDMYDNAITIVKSKVGLTNV 70
           KDL + FI+ +K Y    +EI+ W+AL +K V   YI  I+DMY+ A T V+++ G T  
Sbjct: 129 KDLHLVFIDLEKAYDRVPREIL-WKALKKKGVRIAYIKAIQDMYEGASTCVRTQDGDTVD 187

Query: 69  LPITVDLHQVSTLSLCLFALVMD 1
            PIT+ LHQ STLS  LF LV+D
Sbjct: 188 FPITIGLHQGSTLSPYLFTLVLD 210


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 41/103 (39%), Positives = 63/103 (61%)
 Frame = -3

Query: 309 SVNKSIWI*AREINHGR*ILKDLLMTFIEQQKLYMIKHQEIIIWRALGRKRVTNRYIDLI 130
           S  ++I++  R +   R   +DL + FI+ +K Y    +EI+ W+AL +K V   YI  I
Sbjct: 5   STMEAIYLLRRVMEQYRMAQQDLHLIFIDLEKAYDRVPREIL-WKALEKKGVRVAYIRAI 63

Query: 129 KDMYDNAITIVKSKVGLTNVLPITVDLHQVSTLSLCLFALVMD 1
           +DMYD   T V+++ G ++  PIT+ LHQ STLS  LF L++D
Sbjct: 64  QDMYDRVSTSVRTQGGESDDFPITIGLHQGSTLSPYLFTLILD 106


>gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
          Length = 588

 Score = 60.1 bits (144), Expect(2) = 3e-09
 Identities = 34/73 (46%), Positives = 45/73 (61%)
 Frame = -3

Query: 246 DLLMTFIEQQKLYMIKHQEIIIWRALGRKRVTNRYIDLIKDMYDNAITIVKSKVGLTNVL 67
           DL + FI+ +K Y    +E++ W  L +K V  RYI +IKDMYD  +T V++  G T   
Sbjct: 305 DLYIVFIDLEKAYDRVPREVLWW-VLEKKGVHVRYIKVIKDMYDGVVTSVRTVGGYTAKF 363

Query: 66  PITVDLHQVSTLS 28
           PI VDLHQ S LS
Sbjct: 364 PIWVDLHQRSALS 376



 Score = 26.6 bits (57), Expect(2) = 3e-09
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 323 RAKTIVSINQFGFKLGRSTMDA 258
           RA   +S NQFGF  G+ST +A
Sbjct: 267 RATATISGNQFGFMPGKSTTEA 288


>gb|EMT09227.1| Putative dolichyl-phosphate-mannose--glycolipid
           alpha-mannosyltransferase [Aegilops tauschii]
          Length = 902

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 38/83 (45%), Positives = 51/83 (61%)
 Frame = -3

Query: 249 KDLLMTFIEQQKLYMIKHQEIIIWRALGRKRVTNRYIDLIKDMYDNAITIVKSKVGLTNV 70
           KDL M F + +K Y  K  + ++WR L + +V  +YI LIK MYDN +T V++  G T+ 
Sbjct: 624 KDLHMVFTDLEKTYD-KIPQNVMWRVLEKHKVPPKYISLIKGMYDNVVTSVRTGDGDTDD 682

Query: 69  LPITVDLHQVSTLSLCLFALVMD 1
             I + L Q S LS  LFALVMD
Sbjct: 683 FSIIIGLRQGSALSPYLFALVMD 705


>emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcriptase) domain
           containing protein [Haemonchus contortus]
          Length = 1526

 Score = 60.1 bits (144), Expect(2) = 1e-08
 Identities = 27/62 (43%), Positives = 40/62 (64%)
 Frame = -3

Query: 186 IIWRALGRKRVTNRYIDLIKDMYDNAITIVKSKVGLTNVLPITVDLHQVSTLSLCLFALV 7
           ++WRAL +++V    I L+KDMYD + T +++  G T  + +TV +HQ S LS  LF L 
Sbjct: 687 VLWRALRKRKVPEHLISLVKDMYDGSTTTIRTPHGQTGAIDVTVGVHQGSALSPFLFLLT 746

Query: 6   MD 1
           MD
Sbjct: 747 MD 748



 Score = 24.6 bits (52), Expect(2) = 1e-08
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -1

Query: 308 VSINQFGFKLGRSTMDA 258
           +S  QFGF  GRST DA
Sbjct: 635 ISEKQFGFMPGRSTTDA 651


>gb|EXB56439.1| putative CRM domain-containing protein [Morus notabilis]
          Length = 506

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 36/82 (43%), Positives = 50/82 (60%)
 Frame = -3

Query: 246 DLLMTFIEQQKLYMIKHQEIIIWRALGRKRVTNRYIDLIKDMYDNAITIVKSKVGLTNVL 67
           DL M FI+ +K Y    +E++ W  L ++ V  RYI +IKDMYD  +T V++  G T   
Sbjct: 152 DLHMVFIDLEKAYDRVPREVLWW-VLEKRGVHVRYIKVIKDMYDRVVTSVRTAGGYTAEF 210

Query: 66  PITVDLHQVSTLSLCLFALVMD 1
           PI + L+Q S LS  LF +VMD
Sbjct: 211 PIRIGLNQGSALSPYLFTIVMD 232


>gb|ACN78498.1| putative reverse transcriptase [Arachis hypogaea]
          Length = 149

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 39/103 (37%), Positives = 61/103 (59%)
 Frame = -3

Query: 309 SVNKSIWI*AREINHGR*ILKDLLMTFIEQQKLYMIKHQEIIIWRALGRKRVTNRYIDLI 130
           S  ++I++  R +   R   +DL M FI+ +K Y    +E++ W+ L +K V   Y   I
Sbjct: 44  STTEAIYLLRRMMERYRSNKRDLHMVFIDLEKAYDRVPREVL-WKVLEKKTVRIAYSCAI 102

Query: 129 KDMYDNAITIVKSKVGLTNVLPITVDLHQVSTLSLCLFALVMD 1
           KDMYD A T VK++ G+T    I++ L+Q S+LS  LF LV++
Sbjct: 103 KDMYDGATTSVKTQGGVTKKFLISIGLYQGSSLSPYLFTLVLE 145


>gb|EXC31207.1| DNA ligase 4 [Morus notabilis]
          Length = 627

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 38/103 (36%), Positives = 57/103 (55%)
 Frame = -3

Query: 309 SVNKSIWI*AREINHGR*ILKDLLMTFIEQQKLYMIKHQEIIIWRALGRKRVTNRYIDLI 130
           S  + I+I    +   R +  DL + FI+ +K Y    +E++ W  L ++ V  RYI +I
Sbjct: 522 STTEVIFILRMLMERYREVKTDLHIVFIDLEKAYDRVPREVLWW-VLEKRGVRVRYIKVI 580

Query: 129 KDMYDNAITIVKSKVGLTNVLPITVDLHQVSTLSLCLFALVMD 1
           KDMYD  +T V++  G T   PI + LHQ S LS   F +V+D
Sbjct: 581 KDMYDGVVTSVRTVGGYTTEFPIRIGLHQRSALSPYFFTIVVD 623


>gb|EMS57362.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
          Length = 643

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 32/62 (51%), Positives = 42/62 (67%)
 Frame = -3

Query: 186 IIWRALGRKRVTNRYIDLIKDMYDNAITIVKSKVGLTNVLPITVDLHQVSTLSLCLFALV 7
           ++W AL + +V  +YI LIKDMYDN +T V++    T+  PI + LHQ S LS  LFALV
Sbjct: 383 VMWWALEKHKVPTKYITLIKDMYDNVVTSVRTSDVDTDDFPIKIGLHQGSALSPYLFALV 442

Query: 6   MD 1
           MD
Sbjct: 443 MD 444