BLASTX nr result
ID: Cocculus22_contig00030250
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00030250
(281 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007023448.1| Pentatricopeptide repeat (PPR) superfamily p... 129 5e-28
emb|CBI30833.3| unnamed protein product [Vitis vinifera] 126 3e-27
ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containi... 126 3e-27
emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera] 126 4e-27
emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera] 125 8e-27
ref|XP_004243036.1| PREDICTED: pentatricopeptide repeat-containi... 118 1e-24
ref|NP_188091.1| pentatricopeptide repeat-containing protein [Ar... 117 2e-24
ref|XP_006367743.1| PREDICTED: pentatricopeptide repeat-containi... 117 2e-24
ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containi... 112 4e-23
ref|XP_007212808.1| hypothetical protein PRUPE_ppa002835mg [Prun... 112 7e-23
ref|XP_002885052.1| pentatricopeptide repeat-containing protein ... 111 9e-23
gb|EXB45758.1| hypothetical protein L484_003842 [Morus notabilis] 110 2e-22
ref|XP_007158970.1| hypothetical protein PHAVU_002G197300g [Phas... 108 6e-22
ref|XP_006490871.1| PREDICTED: pentatricopeptide repeat-containi... 108 8e-22
ref|XP_006445309.1| hypothetical protein CICLE_v10024593mg [Citr... 108 8e-22
ref|XP_006842595.1| hypothetical protein AMTR_s00077p00166950 [A... 107 1e-21
ref|XP_006299179.1| hypothetical protein CARUB_v10015323mg [Caps... 106 3e-21
ref|XP_004298095.1| PREDICTED: pentatricopeptide repeat-containi... 105 5e-21
gb|EYU18632.1| hypothetical protein MIMGU_mgv1a022910mg, partial... 103 3e-20
ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containi... 102 5e-20
>ref|XP_007023448.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao] gi|508778814|gb|EOY26070.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative [Theobroma cacao]
Length = 643
Score = 129 bits (323), Expect = 5e-28
Identities = 56/86 (65%), Positives = 69/86 (80%)
Frame = +1
Query: 1 EPEHCGSYVLISNIYGSIGRYEDVSDLRSAMRTQNVRKIPGCSWVELKNGLHVFVNGDQN 180
EPEHCGSYVL+SN+Y + G+YE+V D+R+ MR QNVRK+PGCSW+ELKNG+H F+NGD
Sbjct: 557 EPEHCGSYVLMSNVYVAAGKYEEVLDVRNMMRQQNVRKLPGCSWIELKNGVHAFINGDCT 616
Query: 181 HPESSDIYTKLGLLIGHLHEYDYMPD 258
HP SS IY L L LHE+DY+PD
Sbjct: 617 HPGSSSIYDGLHSLTALLHEHDYVPD 642
>emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 126 bits (317), Expect = 3e-27
Identities = 54/86 (62%), Positives = 68/86 (79%)
Frame = +1
Query: 1 EPEHCGSYVLISNIYGSIGRYEDVSDLRSAMRTQNVRKIPGCSWVELKNGLHVFVNGDQN 180
EPEHCGSYVL+SN+YG++GRYE+V ++R MR QNVRK PGCSW+ELKNG+HVFV+ D+
Sbjct: 543 EPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRA 602
Query: 181 HPESSDIYTKLGLLIGHLHEYDYMPD 258
HPE+ IY L L L E+ Y+PD
Sbjct: 603 HPEAHSIYAGLNSLTARLREHGYVPD 628
>ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 126 bits (317), Expect = 3e-27
Identities = 54/86 (62%), Positives = 68/86 (79%)
Frame = +1
Query: 1 EPEHCGSYVLISNIYGSIGRYEDVSDLRSAMRTQNVRKIPGCSWVELKNGLHVFVNGDQN 180
EPEHCGSYVL+SN+YG++GRYE+V ++R MR QNVRK PGCSW+ELKNG+HVFV+ D+
Sbjct: 543 EPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRA 602
Query: 181 HPESSDIYTKLGLLIGHLHEYDYMPD 258
HPE+ IY L L L E+ Y+PD
Sbjct: 603 HPEAHSIYAGLNSLTARLREHGYVPD 628
>emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 126 bits (316), Expect = 4e-27
Identities = 54/86 (62%), Positives = 68/86 (79%)
Frame = +1
Query: 1 EPEHCGSYVLISNIYGSIGRYEDVSDLRSAMRTQNVRKIPGCSWVELKNGLHVFVNGDQN 180
EPEHCGSYVL+SN+YG++GRYE+V ++R MR QNVRK PGCSW+ELKNG+HVFV+ D+
Sbjct: 543 EPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRA 602
Query: 181 HPESSDIYTKLGLLIGHLHEYDYMPD 258
HPE+ IY L L L E+ Y+PD
Sbjct: 603 HPEAXSIYAGLNSLTARLXEHGYVPD 628
>emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 125 bits (313), Expect = 8e-27
Identities = 54/86 (62%), Positives = 68/86 (79%)
Frame = +1
Query: 1 EPEHCGSYVLISNIYGSIGRYEDVSDLRSAMRTQNVRKIPGCSWVELKNGLHVFVNGDQN 180
EPEHCGSYVL+SN+YG++GRYE+V ++R MR QNVRK PGCSW+ELKNG+HVFV+ D+
Sbjct: 463 EPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRA 522
Query: 181 HPESSDIYTKLGLLIGHLHEYDYMPD 258
HPE+ IY L L L E+ Y+PD
Sbjct: 523 HPEAYSIYAGLNSLTARLCEHGYVPD 548
>ref|XP_004243036.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Solanum lycopersicum]
Length = 559
Score = 118 bits (295), Expect = 1e-24
Identities = 49/86 (56%), Positives = 66/86 (76%)
Frame = +1
Query: 1 EPEHCGSYVLISNIYGSIGRYEDVSDLRSAMRTQNVRKIPGCSWVELKNGLHVFVNGDQN 180
EP+HCGSYV++SN+YG GRYE+V ++R AM+ QNVRK PGCSW+EL NG+HVF+ D++
Sbjct: 466 EPDHCGSYVILSNVYGQTGRYEEVLEIRDAMKLQNVRKTPGCSWIELHNGVHVFITADKS 525
Query: 181 HPESSDIYTKLGLLIGHLHEYDYMPD 258
HPE++ IY L L L E+ Y P+
Sbjct: 526 HPEANLIYAGLNSLTARLCEHGYTPE 551
>ref|NP_188091.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274207|sp|Q9LUC2.1|PP231_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g14730 gi|9294394|dbj|BAB02404.1| unnamed protein
product [Arabidopsis thaliana]
gi|332642039|gb|AEE75560.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 653
Score = 117 bits (292), Expect = 2e-24
Identities = 49/84 (58%), Positives = 63/84 (75%)
Frame = +1
Query: 1 EPEHCGSYVLISNIYGSIGRYEDVSDLRSAMRTQNVRKIPGCSWVELKNGLHVFVNGDQN 180
EPEHCG YVL+SN+Y G+YE+V D+R AMR QNV+K PGCSW+ LKNG+H F G+Q
Sbjct: 566 EPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQT 625
Query: 181 HPESSDIYTKLGLLIGHLHEYDYM 252
HPE I+ L L+I H+H ++YM
Sbjct: 626 HPEFKSIHDWLSLVISHMHGHEYM 649
>ref|XP_006367743.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like isoform X1 [Solanum tuberosum]
gi|565404649|ref|XP_006367744.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g14730-like isoform X2 [Solanum tuberosum]
gi|565404651|ref|XP_006367745.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g14730-like isoform X3 [Solanum tuberosum]
Length = 637
Score = 117 bits (292), Expect = 2e-24
Identities = 49/86 (56%), Positives = 66/86 (76%)
Frame = +1
Query: 1 EPEHCGSYVLISNIYGSIGRYEDVSDLRSAMRTQNVRKIPGCSWVELKNGLHVFVNGDQN 180
EP+HCGSYV++SN+YG GRYE+V ++R AM+ QNVRK PGCSW+EL NG+HVF+ D++
Sbjct: 544 EPDHCGSYVILSNVYGQTGRYEEVLEIRDAMKLQNVRKTPGCSWIELHNGVHVFIIADKS 603
Query: 181 HPESSDIYTKLGLLIGHLHEYDYMPD 258
HPE++ IY L L L E+ Y P+
Sbjct: 604 HPEANLIYAGLNSLTARLCEHGYTPE 629
>ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like isoform X1 [Glycine max]
gi|571498352|ref|XP_006594194.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g14730-like isoform X2 [Glycine max]
Length = 628
Score = 112 bits (281), Expect = 4e-23
Identities = 47/85 (55%), Positives = 64/85 (75%)
Frame = +1
Query: 1 EPEHCGSYVLISNIYGSIGRYEDVSDLRSAMRTQNVRKIPGCSWVELKNGLHVFVNGDQN 180
EP+HCG+YVL+SN+YG +GRYE+V + R M+ QNV+K PGCSW+EL NG+HVF+ GD+
Sbjct: 542 EPDHCGNYVLMSNVYGVVGRYEEVLEWRYTMKQQNVKKRPGCSWIELVNGVHVFITGDRT 601
Query: 181 HPESSDIYTKLGLLIGHLHEYDYMP 255
HP++ IY L L L E+ Y+P
Sbjct: 602 HPQTEYIYAGLNSLTAVLQEHGYVP 626
>ref|XP_007212808.1| hypothetical protein PRUPE_ppa002835mg [Prunus persica]
gi|462408673|gb|EMJ14007.1| hypothetical protein
PRUPE_ppa002835mg [Prunus persica]
Length = 629
Score = 112 bits (279), Expect = 7e-23
Identities = 48/87 (55%), Positives = 66/87 (75%)
Frame = +1
Query: 1 EPEHCGSYVLISNIYGSIGRYEDVSDLRSAMRTQNVRKIPGCSWVELKNGLHVFVNGDQN 180
+P H G+YVL+SNIY + GRYE+VS++R MR QNV+K PGCSW+ELKNG+H F+ GD+
Sbjct: 543 DPGHSGNYVLMSNIYVANGRYEEVSEVRHTMRQQNVKKTPGCSWIELKNGVHAFITGDRA 602
Query: 181 HPESSDIYTKLGLLIGHLHEYDYMPDF 261
HP+++ IY +L L L E+ Y+P F
Sbjct: 603 HPKANFIYAELDSLTARLREHGYVPHF 629
>ref|XP_002885052.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330892|gb|EFH61311.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 652
Score = 111 bits (278), Expect = 9e-23
Identities = 47/84 (55%), Positives = 61/84 (72%)
Frame = +1
Query: 1 EPEHCGSYVLISNIYGSIGRYEDVSDLRSAMRTQNVRKIPGCSWVELKNGLHVFVNGDQN 180
EPEHCG YVL+SN+Y +YE+V D+R M+ QNV+K PGCSW+ L+NG+H F GDQ
Sbjct: 565 EPEHCGVYVLMSNVYVEAKKYEEVLDVRDTMKEQNVKKTPGCSWIGLQNGVHTFFTGDQT 624
Query: 181 HPESSDIYTKLGLLIGHLHEYDYM 252
HPE I+ L LLI H+H ++YM
Sbjct: 625 HPEFESIHGWLSLLISHMHGHEYM 648
>gb|EXB45758.1| hypothetical protein L484_003842 [Morus notabilis]
Length = 633
Score = 110 bits (276), Expect = 2e-22
Identities = 48/86 (55%), Positives = 65/86 (75%)
Frame = +1
Query: 1 EPEHCGSYVLISNIYGSIGRYEDVSDLRSAMRTQNVRKIPGCSWVELKNGLHVFVNGDQN 180
EP CG YVL+SNIYG GRYE+VS++R +MR QNV+K PGCSW+ELK+G+H F+ D+
Sbjct: 547 EPGACGGYVLMSNIYGVAGRYEEVSEVRDSMRQQNVKKTPGCSWIELKDGVHTFITADRV 606
Query: 181 HPESSDIYTKLGLLIGHLHEYDYMPD 258
HP++S IY +L L L E+ Y+P+
Sbjct: 607 HPDASLIYAELNSLTVRLREHGYVPN 632
>ref|XP_007158970.1| hypothetical protein PHAVU_002G197300g [Phaseolus vulgaris]
gi|561032385|gb|ESW30964.1| hypothetical protein
PHAVU_002G197300g [Phaseolus vulgaris]
Length = 634
Score = 108 bits (271), Expect = 6e-22
Identities = 45/81 (55%), Positives = 61/81 (75%)
Frame = +1
Query: 1 EPEHCGSYVLISNIYGSIGRYEDVSDLRSAMRTQNVRKIPGCSWVELKNGLHVFVNGDQN 180
EP HCG+YVL+SN+YG +G+YE+VS++R M+ QNV+K PGCSW+EL NG+HVF+ GD+
Sbjct: 545 EPGHCGNYVLMSNVYGVVGQYEEVSEMRHTMKQQNVKKRPGCSWIELVNGVHVFITGDRT 604
Query: 181 HPESSDIYTKLGLLIGHLHEY 243
HP + IY L L L E+
Sbjct: 605 HPHTHSIYAALNSLTSLLQEH 625
>ref|XP_006490871.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like isoform X1 [Citrus sinensis]
gi|568875583|ref|XP_006490872.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g14730-like isoform X2 [Citrus sinensis]
gi|568875585|ref|XP_006490873.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g14730-like isoform X3 [Citrus sinensis]
gi|568875587|ref|XP_006490874.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g14730-like isoform X4 [Citrus sinensis]
gi|568875589|ref|XP_006490875.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g14730-like isoform X5 [Citrus sinensis]
Length = 660
Score = 108 bits (270), Expect = 8e-22
Identities = 47/81 (58%), Positives = 62/81 (76%)
Frame = +1
Query: 1 EPEHCGSYVLISNIYGSIGRYEDVSDLRSAMRTQNVRKIPGCSWVELKNGLHVFVNGDQN 180
EP HCG+YVL+SNIY + G+YE+V D+R MR QNVRK PGCSW+ELK+GLH F++ D++
Sbjct: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRS 602
Query: 181 HPESSDIYTKLGLLIGHLHEY 243
HPE+ IY +L L L E+
Sbjct: 603 HPEAKSIYAELHSLTARLREH 623
>ref|XP_006445309.1| hypothetical protein CICLE_v10024593mg [Citrus clementina]
gi|557547571|gb|ESR58549.1| hypothetical protein
CICLE_v10024593mg [Citrus clementina]
Length = 651
Score = 108 bits (270), Expect = 8e-22
Identities = 47/81 (58%), Positives = 62/81 (76%)
Frame = +1
Query: 1 EPEHCGSYVLISNIYGSIGRYEDVSDLRSAMRTQNVRKIPGCSWVELKNGLHVFVNGDQN 180
EP HCG+YVL+SNIY + G+YE+V D+R MR QNVRK PGCSW+ELK+GLH F++ D++
Sbjct: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRS 602
Query: 181 HPESSDIYTKLGLLIGHLHEY 243
HPE+ IY +L L L E+
Sbjct: 603 HPEAKSIYAELHSLTARLREH 623
>ref|XP_006842595.1| hypothetical protein AMTR_s00077p00166950 [Amborella trichopoda]
gi|548844681|gb|ERN04270.1| hypothetical protein
AMTR_s00077p00166950 [Amborella trichopoda]
Length = 566
Score = 107 bits (268), Expect = 1e-21
Identities = 45/85 (52%), Positives = 65/85 (76%)
Frame = +1
Query: 1 EPEHCGSYVLISNIYGSIGRYEDVSDLRSAMRTQNVRKIPGCSWVELKNGLHVFVNGDQN 180
EP HCG+YVL+SN+Y + GR++DVS++R AMR V K PGCSW+EL++G+HVF+ D++
Sbjct: 460 EPSHCGTYVLLSNMYMAQGRHQDVSEVRRAMRRNGVAKTPGCSWIELRSGVHVFLMADRS 519
Query: 181 HPESSDIYTKLGLLIGHLHEYDYMP 255
HPE IY +L +L+G + E Y+P
Sbjct: 520 HPECDRIYEELDVLVGMMRENGYVP 544
>ref|XP_006299179.1| hypothetical protein CARUB_v10015323mg [Capsella rubella]
gi|482567888|gb|EOA32077.1| hypothetical protein
CARUB_v10015323mg [Capsella rubella]
Length = 657
Score = 106 bits (265), Expect = 3e-21
Identities = 45/84 (53%), Positives = 58/84 (69%)
Frame = +1
Query: 1 EPEHCGSYVLISNIYGSIGRYEDVSDLRSAMRTQNVRKIPGCSWVELKNGLHVFVNGDQN 180
EPEHCG YVL+SN+Y G+Y +V D+R MR QNV+K PGCSW+ LK G+H F GD+
Sbjct: 567 EPEHCGGYVLMSNVYVKAGKYMEVLDVRDTMRQQNVKKTPGCSWIGLKTGVHTFFTGDKT 626
Query: 181 HPESSDIYTKLGLLIGHLHEYDYM 252
HPE I+ L LI H+H ++ M
Sbjct: 627 HPELKSIHAWLNQLISHMHGHESM 650
>ref|XP_004298095.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Fragaria vesca subsp. vesca]
Length = 630
Score = 105 bits (263), Expect = 5e-21
Identities = 45/85 (52%), Positives = 63/85 (74%)
Frame = +1
Query: 1 EPEHCGSYVLISNIYGSIGRYEDVSDLRSAMRTQNVRKIPGCSWVELKNGLHVFVNGDQN 180
+P H G+YVL SNI+ G+YE+VS++R MR NV+K PGCSW ELK+G+H FVNGD++
Sbjct: 544 DPGHSGNYVLTSNIFVDTGQYEEVSEVRQTMRQHNVQKAPGCSWTELKDGMHAFVNGDRS 603
Query: 181 HPESSDIYTKLGLLIGHLHEYDYMP 255
HP+++ IY +L L L E+ Y+P
Sbjct: 604 HPKANFIYAQLDSLTARLREHGYVP 628
>gb|EYU18632.1| hypothetical protein MIMGU_mgv1a022910mg, partial [Mimulus
guttatus]
Length = 582
Score = 103 bits (256), Expect = 3e-20
Identities = 44/84 (52%), Positives = 62/84 (73%)
Frame = +1
Query: 7 EHCGSYVLISNIYGSIGRYEDVSDLRSAMRTQNVRKIPGCSWVELKNGLHVFVNGDQNHP 186
+HCG+YVL+SNIYG+ GRYE+V++LR MR Q+V+K PGCSW+EL +G+HVF+N D+ HP
Sbjct: 493 DHCGNYVLMSNIYGAAGRYEEVAELRHTMRQQDVKKSPGCSWIELSDGMHVFLNADRGHP 552
Query: 187 ESSDIYTKLGLLIGHLHEYDYMPD 258
E + +Y L L L ++ D
Sbjct: 553 EENGVYDWLDSLTACLRGRGHVVD 576
>ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 102 bits (254), Expect = 5e-20
Identities = 43/71 (60%), Positives = 57/71 (80%)
Frame = +1
Query: 1 EPEHCGSYVLISNIYGSIGRYEDVSDLRSAMRTQNVRKIPGCSWVELKNGLHVFVNGDQN 180
EPEHCGSYVL+SN+YG IGRYE+V ++R M+ QNV+K PGCSW+ELK+G+HVF GD+
Sbjct: 519 EPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVHVFRTGDRT 578
Query: 181 HPESSDIYTKL 213
H E + + +L
Sbjct: 579 HSELNALTNQL 589